Pregenerated sensors for PPP1R3F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039556Ensembl transcript IDs: ENSMUST00000115742.9, ENSMUST00000132788.2, ENSMUST00000150787.8
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTGGGGTaGCAGAGGGACTGTCAATCTCCAGATCCCAGAGAGGAGGAAACC | + |
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Preference number: 1 (lower is better) Translates to: VPHSTGPGSHLNTLG*QRDCQSPDPREEET Trigger: GGTTTCCTCCTCTCTGGGATCTGGAGATTGACAGTCCCTCTGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR TCA 90 bp | CAGGTGACCACAGAGGCCAGAGGCATCGGATCCCCTGGAGCTGTTTaGTGTAGATACTGGGAACTCACCGCAGGCCCTCTGAAAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: QVTTEARGIGSPGAV*CRYWELTAGPLKEQ Trigger: CTGCTCTTTCAGAGGGCCTGCGGTGAGTTCCCAGTATCTACATCAAACAGCTCCAGGGGATCCGATGCCTCTGGCCTCTGTGGTCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CCA 90 bp | TCAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTaGGGTGACAGAGGGACTGTCAATCTCCAGATCCCAGAGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SKSLTPQALGLISTL*GDRGTVNLQIPERR Trigger: CCTCCTCTCTGGGATCTGGAGATTGACAGTCCCTCTGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR TCA 90 bp | GGCCATCTTCTCTCCCAACATGGACCACAGCCATTCCCCAGAATGTaGCTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: GHLLSQHGPQPFPRM*LPYTLRPKQETSTA Trigger: TGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGAGAAGATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR CCA 90 bp | CCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTaGGTCTCATCTCAACACTCTGGGGTGACAGAGGGACTGTCAATC | + |
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Preference number: 1 (lower is better) Translates to: PVKHSQNQSPSLHRP*VSSQHSGVTEGLSI Trigger: GATTGACAGTCCCTCTGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR CCA 90 bp | TGTATTCCACTCCACAAATACTACTGCAGGAAGCCTGCTTCTGGCTaGAGAGCTCAGAGATGGGAAGGCCTCTCTCCAGTCAAGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: CIPLHKYYCRKPASG*RAQRWEGLSPVKHS Trigger: AGAGTGCTTGACTGGAGAGAGGCCTTCCCATCTCTGAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGGAGTGGAATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR CCA 90 bp | GGAACAGTGAGCGTGGCATCCTGGAAACCAAGTGAAGAAATGGCTTaGACCAGAGATGACCAACTGTCAAATGCTGCCAGGAAGCCATTG | + |
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Preference number: 1 (lower is better) Translates to: GTVSVASWKPSEEMA*TRDDQLSNAARKPL Trigger: CAATGGCTTCCTGGCAGCATTTGACAGTTGGTCATCTCTGGTCCAAGCCATTTCTTCACTTGGTTTCCAGGATGCCACGCTCACTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 90 bp | AGGATGTTGTCCTCCCAAGTTCTGGGCCACAGCCCTCTCTCCCACTaGGGAAATGCTTGGCGACTTTATGATCATCTCCTTGCTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: RMLSSQVLGHSPLSH*GNAWRLYDHLLAFF Trigger: AAAGAAAGCAAGGAGATGATCATAAAGTCGCCAAGCATTTCCTCAGTGGGAGAGAGGGCTGTGGCCCAGAACTTGGGAGGACAACATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR GCA 90 bp | ATTTCTCACACCATCCACCATTGTATTCCACTCCACAAATACTACTaGAGGAAGCCTGCTTCTGGCTGGAGAGCTCAGAGATGGGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ISHTIHHCIPLHKYY*RKPASGWRAQRWEG Trigger: GCCTTCCCATCTCTGAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGGAGTGGAATACAATGGTGGATGGTGTGAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR TCA 90 bp | GTTCCATGTGTTTCATCCAATGGGCTGTTCCTGGGCAAATCTAGTTaGTGGGCACAGTATGAAATGAGGAACAGTGAGCGTGGCATCCTG | + |
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Preference number: 1 (lower is better) Translates to: VPCVSSNGLFLGKSS*WAQYEMRNSERGIL Trigger: CAGGATGCCACGCTCACTGTTCCTCATTTCATACTGTGCCCATCAACTAGATTTGCCCAGGAACAGCCCATTGGATGAAACACATGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 90 bp | CTTGGACCAGAGATGACCAACTGTCAAATGCTGCCAGGAAGCCATTaGAGACATATGGGTTTATCTGTTGCAGCAACAGCACCAGGATGT | + |
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Preference number: 1 (lower is better) Translates to: LGPEMTNCQMLPGSH*RHMGLSVAATAPGC Trigger: ACATCCTGGTGCTGTTGCTGCAACAGATAAACCCATATGTCTTCAATGGCTTCCTGGCAGCATTTGACAGTTGGTCATCTCTGGTCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 90 bp | GGGCCACAGCCCTCTCTCCCACTGAGGAAATGCTTGGCGACTTTATaGTCATCTCCTTGCTTTCTTTACATTATCTGTCATGGGATGATG | + |
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Preference number: 1 (lower is better) Translates to: GPQPSLPLRKCLATL*SSPCFLYIICHGMM Trigger: CATCATCCCATGACAGATAATGTAAAGAAAGCAAGGAGATGATCATAAAGTCGCCAAGCATTTCCTCAGTGGGAGAGAGGGCTGTGGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CCA 90 bp | CTGCTGCGCACCATTCTGTTTGGTGAATGTATGCCTAGTAGGCCCTaGCTTTTCTATCATTTTTCATACATTCTAGGATTAAGTCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LLRTILFGECMPSRP*LFYHFSYILGLSPS Trigger: TGAAGGACTTAATCCTAGAATGTATGAAAAATGATAGAAAAGCCAGGGCCTACTAGGCATACATTCACCAAACAGAATGGTGCGCAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CCA 90 bp | CAAAGGGATCACTATTGGATGATGGATCACAGACACCTTAATAACTaGCTACACCATGAAGAAAATGTCTCTCCCTTTCCACCCATAATG | + |
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Preference number: 1 (lower is better) Translates to: QRDHYWMMDHRHLNN*LHHEENVSPFPPIM Trigger: CATTATGGGTGGAAAGGGAGAGACATTTTCTTCATGGTGTAGCCAGTTATTAAGGTGTCTGTGATCCATCATCCAATAGTGATCCCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CCA 90 bp | ATAAATGTATCTAACCTTTCTTTTAAAGCTTCTGGGTATCCTGTTTaGAGTAGAAATGCAATGTCTGGGGACAACAAACCTGATACAAAT | + |
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Preference number: 1 (lower is better) Translates to: INVSNLSFKASGYPV*SRNAMSGDNKPDTN Trigger: ATTTGTATCAGGTTTGTTGTCCCCAGACATTGCATTTCTACTCCAAACAGGATACCCAGAAGCTTTAAAAGAAAGGTTAGATACATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACAGGATGTTGTCCTCCCAAGTTCTGGGCCACAGCCCTCTCTCCCACTGAGGAGGAAACCTGCTGTTaGAACCTAACCCTCCCGGCA | + |
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Preference number: 2 (lower is better) Translates to: MTGCCPPKFWATALSPTEEETCC*NLTLPA Trigger: TGCCGGGAGGGTTAGGTTCCAACAGCAGGTTTCCTC...CTCAGTGGGAGAGAGGGCTGTGGCCCAGAACTTGGGAGGACAACATCCTGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CAA 90 bp | AGGGGTCTCCCTGCTAGTGTCAAAAGCTGCAGTCACCTCCAAACCTaGTCGCTAATCCATGCCTCCATACCTACAGCTGAGCATAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: RGLPASVKSCSHLQT*SLIHASIPTAEHSH Trigger: GTGGCTATGCTCAGCTGTAGGTATGGAGGCATGGATTAGCGACAAGGTTTGGAGGTGACTGCAGCTTTTGACACTAGCAGGGAGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR-3UTR CCA 90 bp | GTATTCCACTCCACAAATACTACTGCAGGAAGCCTGCTTCTGGCTGGAGAGCTCGAGGAAACCTGCTGTTaGAACCTAACCCTCCCGGCA | + |
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Preference number: 2 (lower is better) Translates to: VFHSTNTTAGSLLLAGELEETCC*NLTLPA Trigger: TGCCGGGAGGGTTAGGTTCCAACAGCAGGTTTCCTC...GAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGGAGTGGAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAGATCACTCCACAGGCCCTaGGTCTCATCTCAACACTCT | + |
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Preference number: 2 (lower is better) Translates to: SLGNCAPRPAHDHSPSSRSLHRP*VSSQHS Trigger: AGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGA...TCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR-3UTR CCA 90 bp | AACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGGCCCATCACTCCACAGGCCCTaGGTCTCATCTCAACACTCT | + |
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Preference number: 2 (lower is better) Translates to: NMDHSHSPECDYPIHSGPSLHRP*VSSQHS Trigger: AGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGA...TGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR-3UTR TCA 90 bp | ATGACAGGATGTTGTCCTCCCAAGTTCTGGGCCACAGCCCTCTCTCCCACTGAGTTATCTGTCATGGGATaGTGTGTTCGTCTTAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: MTGCCPPKFWATALSPTELSVMG*CVRLSC Trigger: ACAACTAAGACGAACACATCATCCCATGACAGATAA...CTCAGTGGGAGAGAGGGCTGTGGCCCAGAACTTGGGAGGACAACATCCTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTAGAGAGGAGGAAACCTaGTGTTGGAACCTAACCCTC | + |
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Preference number: 2 (lower is better) Translates to: SQNQSPSLHRPWVSSQHSREEET*CWNLTL Trigger: GAGGGTTAGGTTCCAACAGCAGGTTTCCTCCTCTCT...AGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTAGAGAGGAGGAAACCTaGTGTTGGAACCTAACCCTC | + |
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Preference number: 2 (lower is better) Translates to: SLPTWTTAIPQNVTTLYTREEET*CWNLTL Trigger: GAGGGTTAGGTTCCAACAGCAGGTTTCCTCCTCTCT...AGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTGGCGACTTTATGATCATCTCCTTGCTTTCTTTACATTATCTGTCATGGTCAGCATCCCAGCTGTaGGAGTCCCCCAGCTCATGC | + |
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Preference number: 2 (lower is better) Translates to: MLGDFMIISLLSLHYLSWSASQL*ESPSSC Trigger: GCATGAGCTGGGGGACTCTCACAGCTGGGATGCTGA...CCATGACAGATAATGTAAAGAAAGCAAGGAGATGATCATAAAGTCGCCAAGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGACCAGCTCATGACCACTCTCCCTCATCCAGAGAATTATACAAAAATAAACAGGAAGCCTGCTTCTaGCTGGAGAGCTCAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: PRPAHDHSPSSRELYKNKQEACF*LESSEM Trigger: CATCTCTGAGCTCTCCAGCCAGAAGCAGGCTTCCTG...TTTATTTTTGTATAATTCTCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCGCAGGTTGCACAGGTTaGTTGTTAATAAATATATCT | + |
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Preference number: 2 (lower is better) Translates to: TDPQGHIEEAAVGMAVAIAGCTG*LLINIS Trigger: AGATATATTTATTAACAACCAACCTGTGCAACCTGC...GATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR-3UTR CCA 90 bp | CATGAAGAAAATGTCTCTCCCTTTCCACCCATAATGAGCTGCATATACATCCTCACATTAACTCCTTTCTaGGGCCTTCCCCATTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: HEENVSPFPPIMSCIYILTLTPF*GLPHLG Trigger: CCCTAAATGGGGAAGGCCCCAGAAAGGAGTTAATGT...GAGGATGTATATGCAGCTCATTATGGGTGGAAAGGGAGAGACATTTTCTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGGTCAAGAGGCATTCTTACTGTCACTTAATGTTCCATGTGTTTCATCCAGCAGGTTGCACAGGTTaGTTGTTAATAAATATATCT | + |
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Preference number: 2 (lower is better) Translates to: TLVKRHSYCHLMFHVFHPAGCTG*LLINIS Trigger: AGATATATTTATTAACAACCAACCTGTGCAACCTGC...TGGATGAAACACATGGAACATTAAGTGACAGTAAGAATGCCTCTTGACCAAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | ACAGAGGCCAGAGGCATCGGATCCCCTGGAGCTGTTTaGTGTAGATACTGGGAACTCACCGCAGGCCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TEARGIGSPGAV*CRYWELTAGPL Trigger: CAGAGGGCCTGCGGTGAGTTCCCAGTATCTACATCAAACAGCTCCAGGGGATCCGATGCCTCTGGCCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | TCCACAGGCCCTGGGTCTCATCTCAACACTCTGGGGTaGCAGAGGGACTGTCAATCTCCAGATCCCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: STGPGSHLNTLG*QRDCQSPDPRE Trigger: CTCTCTGGGATCTGGAGATTGACAGTCCCTCTGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | CTCTCCCAACATGGACCACAGCCATTCCCCAGAATGTaGCTACCCTATACACTCAGGCCCAAACAGGAGACC | + |
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Preference number: 3 (lower is better) Translates to: LSQHGPQPFPRM*LPYTLRPKQET Trigger: GGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR CCA 72 bp | CACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTaGGTCTCATCTCAACACTCTGGGGTGACAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: HSQNQSPSLHRP*VSSQHSGVTEG Trigger: TCCCTCTGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | TCCTCCCAAGTTCTGGGCCACAGCCCTCTCTCCCACTaGGGAAATGCTTGGCGACTTTATGATCATCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SSQVLGHSPLSH*GNAWRLYDHLL Trigger: AAGGAGATGATCATAAAGTCGCCAAGCATTTCCTCAGTGGGAGAGAGGGCTGTGGCCCAGAACTTGGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR GCA 72 bp | TTGTATTCCACTCCACAAATACTACTGCAGGAAGCCTaGTTCTGGCTGGAGAGCTCAGAGATGGGAAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LYSTPQILLQEA*FWLESSEMGRP Trigger: AGGCCTTCCCATCTCTGAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGGAGTGGAATACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR CCA 72 bp | AGCGTGGCATCCTGGAAACCAAGTGAAGAAATGGCTTaGACCAGAGATGACCAACTGTCAAATGCTGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: SVASWKPSEEMA*TRDDQLSNAAR Trigger: CCTGGCAGCATTTGACAGTTGGTCATCTCTGGTCCAAGCCATTTCTTCACTTGGTTTCCAGGATGCCACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | GTGTGTTCATGTGTCTCATATACAAATAAATGCAGGTaGCCACAGAGGCCAGAGGCATCGGATCCCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: VCSCVSYTNKCR*PQRPEASDPLE Trigger: CTCCAGGGGATCCGATGCCTCTGGCCTCTGTGGTCACCTGCATTTATTTGTATATGAGACACATGAACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | CACCCACAAGCCACACCCAAAGGGATCACTATTGGATaGTGGATCACAGACACCTTAATAACTGGCTACACC | + |
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Preference number: 3 (lower is better) Translates to: HPQATPKGITIG*WITDTLITGYT Trigger: GGTGTAGCCAGTTATTAAGGTGTCTGTGATCCATCATCCAATAGTGATCCCTTTGGGTGTGGCTTGTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | GTTTCATCCAATGGGCTGTTCCTGGGCAAATCTAGTTaGTGGGCACAGTATGAAATGAGGAACAGTGAGCGT | + |
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Preference number: 3 (lower is better) Translates to: VSSNGLFLGKSS*WAQYEMRNSER Trigger: ACGCTCACTGTTCCTCATTTCATACTGTGCCCATCAACTAGATTTGCCCAGGAACAGCCCATTGGATGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | GAGATGACCAACTGTCAAATGCTGCCAGGAAGCCATTaGAGACATATGGGTTTATCTGTTGCAGCAACAGCA | + |
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Preference number: 3 (lower is better) Translates to: EMTNCQMLPGSH*RHMGLSVAATA Trigger: TGCTGTTGCTGCAACAGATAAACCCATATGTCTTCAATGGCTTCCTGGCAGCATTTGACAGTTGGTCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR GCA 72 bp | CCTTCCTGCTGCGCACCATTCTGTTTGGTGAATGTATaGCTAGTAGGCCCTGGCTTTTCTATCATTTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: PSCCAPFCLVNV*LVGPGFSIIFH Trigger: ATGAAAAATGATAGAAAAGCCAGGGCCTACTAGGCATACATTCACCAAACAGAATGGTGCGCAGCAGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CCA 72 bp | ACTGTCAAATGCTGCCAGGAAGCCATTGAAGACATATaGGTTTATCTGTTGCAGCAACAGCACCAGGATGTT | + |
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Preference number: 3 (lower is better) Translates to: TVKCCQEAIEDI*VYLLQQQHQDV Trigger: AACATCCTGGTGCTGTTGCTGCAACAGATAAACCCATATGTCTTCAATGGCTTCCTGGCAGCATTTGACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CCA 72 bp | CGGTTAAGTGGTTCAAATGATGTGAAACCTTTTCTTTaGCTCCTTTTGCTCAGCATCCCAGCTGTGAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: RLSGSNDVKPFL*LLLLSIPAVRV Trigger: GACTCTCACAGCTGGGATGCTGAGCAAAAGGAGCCAAAGAAAAGGTTTCACATCATTTGAACCACTTAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGAGCTAGCAGGTTGCACAGGTaGGTTGTTAATAAATATATC | + |
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Preference number: 3 (lower is better) Translates to: LRPKQETSTARHIISHRASRLHR*VVNKYI Trigger: GATATATTTATTAACAACCAACCTGTGCAACCTGCT...AGCTCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR GCA 72 bp | ACCCATATACACAGACACAGGCTCCCAGACAAAATATaGACGACCAAAGGACCACATATATTAGGACCACAA | + |
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Preference number: 3 (lower is better) Translates to: THIHRHRLPDKI*TTKGPHILGPQ Trigger: TTGTGGTCCTAATATATGTGGTCCTTTGGTCGTGCATATTTTGTCTGGGAGCCTGTGTCTGTGTATATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR TCA 72 bp | CCCTCTCTCCCACTGAGGAAATGCTTGGCGACTTTATaGTCATCTCCTTGCTTTCTTTACATTATCTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: PSLPLRKCLATL*SSPCFLYIICH Trigger: ATGACAGATAATGTAAAGAAAGCAAGGAGATGATCATAAAGTCGCCAAGCATTTCCTCAGTGGGAGAGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCCTAGTAGGCCCTGGCTTTTCTATCATTTTTCATACATTCTAGGATTAAGTTGTCACTTTTGTACCTaGGTCAAGAGGCATTCTTAC | + |
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Preference number: 3 (lower is better) Translates to: MPSRPWLFYHFSYILGLSCHFCT*VKRHSY Trigger: GTAAGAATGCCTCTTGACCAAGGTACAAAAGTGACA...ACTTAATCCTAGAATGTATGAAAAATGATAGAAAAGCCAGGGCCTACTAGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CCA 72 bp | ACCATTCTGTTTGGTGAATGTATGCCTAGTAGGCCCTaGCTTTTCTATCATTTTTCATACATTCTAGGATTA | + |
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Preference number: 3 (lower is better) Translates to: TILFGECMPSRP*LFYHFSYILGL Trigger: TAATCCTAGAATGTATGAAAAATGATAGAAAAGCCAGGGCCTACTAGGCATACATTCACCAAACAGAATGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCCTAGTAGGCCCTGGCTTTTCTATCATTTTTCATACATTCTAGGATTAAGTGGTTGCACAGGTTGGTaGTTAATAAATATATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MPSRPWLFYHFSYILGLSGCTGW*LINISL Trigger: CAGAGATATATTTATTAACAACCAACCTGTGCAACC...ACTTAATCCTAGAATGTATGAAAAATGATAGAAAAGCCAGGGCCTACTAGGCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTGGGGTGACACTGCCCCAGGCGGGCTaGGTGGGACATAGCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSPSLHRPWVSSQHSGVTLPQAG*VGHSGL Trigger: CAGCCCGCTATGTCCCACGCAGCCCGCCTGGGGCAG...TGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCAACCCGCGCACCACTaGCGGGCGTCCCCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLSSQALSKSKSLTPQAQPAHH*RASPRH Trigger: GTGCCTGGGGGACGCCCGCCAGTGGTGCGCGGGTTG...GGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | GTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCAACCCGCGCACCACTaGCGGGCGTCCCCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTTLYTQAQTGDQHSKTHQPAHH*RASPRH Trigger: GTGCCTGGGGGACGCCCGCCAGTGGTGCGCGGGTTG...ATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| 3UTR CAA 72 bp | GGCTCCATGAGCCCCTCCCCACTCTATGACAGGATGTaGTCCTCCCAAGTTCTGGGCCACAGCCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSMSPSPLYDRM*SSQVLGHSPLS Trigger: GGAGAGAGGGCTGTGGCCCAGAACTTGGGAGGACAACATCCTGTCATAGAGTGGGGAGGGGCTCATGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGAGCCCAACCGTCGTGTaGGGCCCGCACGTGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRPLSSQALSKSKSLTPQSPTVV*GPHVHR Trigger: GCGGTGCACGTGCGGGCCTCACACGACGGTTGGGCT...CTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | ATGACAGGATGTTGTCCTCCCAAGTTCTGGGCCACAGCCCTCTCTCCCACTGAGTGTGAGGCCCGCACGTaGACCGCCTTCTCGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MTGCCPPKFWATALSPTECEART*TAFSKE Trigger: CTCCTTCGAGAAGGCGGTGCACGTGCGGGCCTCACA...CTCAGTGGGAGAGAGGGCTGTGGCCCAGAACTTGGGAGGACAACATCCTGTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACACCCAGGCGGGCTGCGTaGGACATAGCGGGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CDYPIHSGPNRRPAQQDTPRRAA*DIAGWV Trigger: CACCCAGCCCGCTATGTCCCACGCAGCCCGCCTGGG...TGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | TATCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAACTTGCATCGGGCCCTaGGGCCTGGTCCCTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLWVIVPQDQLMTTLPHPTCIGP*GLVPWG Trigger: CCCCCAAGGGACCAGGCCTCAGGGCCCGATGCAAGT...TGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTGGGGTGACAAGTATGCCCAGGGCATaGGTGGGGGAAGTGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPSLHRPWVSSQHSGVTSMPRA*VGEVPS Trigger: GGAAGGCACTTCCCCCACTCATGCCCTGGGCATACT...TGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCGGGTGTGGGAGCGGGTaGGATCCGGAGCAGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDPQGHIEEAAVGMAVAIGCGSG*DPEQDS Trigger: ACTGTCCTGCTCCGGATCGCACCCGCTCCCACACCC...GATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAGAGCCCTTCGGCATCAGTaGGTGTGGGAGCGGGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGNCAPRPAHDHSPSSRALRHQ*VWERVR Trigger: TCGCACCCGCTCCCACACCCACTGATGCCGAAGGGC...TCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGAAGGGCCCCCAGAGCTaGGGAGCCAACCCACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPLSSQALSKSKSLTPQKGPQS*GANPHA Trigger: TGCGTGTGGGTTGGCTCCTCAGCTCTGGGGGCCCTT...CTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGAGCTCTATCTGCCCCAGGCGGGCTaGGTGGGACATAGCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPNRRPAQQDTSFLIELYLPQAG*VGHSGL Trigger: CAGCCCGCTATGTCCCACGCAGCCCGCCTGGGGCAG...ATAGAGCTCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGGCCGCAGCCTCCACCTGCTaGTGGGTGGGTTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTWTTAIPQNVTTLYTQAAASTC*WVGSRK Trigger: CTTCCTGGAACCCACCCAGCAGCAGGTGGAGGCTGC...GGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACACGGCATCAGTGGGTGTaGGAGCGGGTGCGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CDYPIHSGPNRRPAQQDTRHQWV*ERVRSG Trigger: TCCGGATCGCACCCGCTCCCACACCCACTGATGCCG...TGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCTGCAGCTGCTGCTGCTaGGGCAGCCCTTCGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TDPQGHIEEAAVGMAVAICSCCC*GSPSAS Trigger: TGATGCCGAAGGGCTGCCCCAGCAGCAGCAGCTGCA...GATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAGAGCCTCCACCTGCTGCTaGGTGGGTTCCAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGNCAPRPAHDHSPSSRASTCC*VGSRKE Trigger: CTCCTTCCTGGAACCCACCCAGCAGCAGGTGGAGGC...TCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCGCCTCCACCTGCTGCTaGGTGGGTTCCAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLSSQALSKSKSLTPQAASTCC*VGSRKE Trigger: CTCCTTCCTGGAACCCACCCAGCAGCAGGTGGAGGC...GGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTGGGGTGACAAGACTTCAGTCCCTGTaGGACCAAGGAGGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSPSLHRPWVSSQHSGVTRLQSL*DQGGQD Trigger: GTCCTGCCCTCCTTGGTCCCACAGGGACTGAAGTCT...TGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGCATGCCTGGTTCCATTCTAAAATTTCTCACACCATCCACCATTGTATTCAGCCCAACCGTCGTGTaGGGCCCGCACGTGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGMPGSILKFLTPSTIVFSPTVV*GPHVHR Trigger: GCGGTGCACGTGCGGGCCTCACACGACGGTTGGGCT...GAATACAATGGTGGATGGTGTGAGAAATTTTAGAATGGAACCAGGCATGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGAGCTCTAACTTGCATCGGGCCCTaGGGCCTGGTCCCTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPKQETSTARHIISHRALTCIGP*GLVPWG Trigger: CCCCCAAGGGACCAGGCCTCAGGGCCCGATGCAAGT...TAGAGCTCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGCGCATAGTGCAGCGTaGTCTCCTCGGCCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GKASLQSSTLKIKVPHSTAHSAA*SPRPEH Trigger: GTGCTCTGGCCGAGGAGATCACGCTGCACTATGCGC...TGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTAAGGGCCCCCAGAGCTaGGGAGCCAACCCACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPTWTTAIPQNVTTLYTKGPQS*GANPHA Trigger: TGCGTGTGGGTTGGCTCCTCAGCTCTGGGGGCCCTT...AGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCATGTGAGGCCCGCACGTaGACCGCCTTCTCGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QALSKSKSLTPQALGLISCEART*TAFSKE Trigger: CTCCTTCGAGAAGGCGGTGCACGTGCGGGCCTCACA...TGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | ACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGATGTTCCTCCCACTCCTaGCCCAGGCGGGCTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRPKQETSTARHIISHRCSSHS*PRRAAW Trigger: CCACGCAGCCCGCCTGGGGCAGGAGTGGGAGGAACA...TCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGCAGGAGGGGATCTCCTaGTCCTGTTCCTCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSSQALSKSKSLTPQALQEGIS*SCSSHS Trigger: GGAGTGGGAGGAACAGGAGCAGGAGATCCCCTCCTG...CAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGAGGCAAAGCGGTCAGTaGAGCCACCGTCGTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRPLSSQALSKSKSLTPQRQSGQ*SHRRRV Trigger: CACCCGACGACGGTGGCTGCACTGACCGCTTTGCCT...CTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAAGGCAAAGCGGTCAGTaGAGCCACCGTCGTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QALSKSKSLTPQALGLISRQSGQ*SHRRRV Trigger: CACCCGACGACGGTGGCTGCACTGACCGCTTTGCCT...TGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCGGGTGTGGGAGCGGGTaGGATCCGGAGCAGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PIHSGPNRRPAQQDTSFLGCGSG*DPEQDS Trigger: ACTGTCCTGCTCCGGATCGCACCCGCTCCCACACCC...GAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTGGGGTGACATCAGCAAAGGGCAGCTaGAAGGCAAAGCGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSPSLHRPWVSSQHSGVTSAKGS*KAKRSV Trigger: CACTGACCGCTTTGCCTTCCAGCTGCCCTTTGCTGA...TGTCACCCCAGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCTCAGAGATGGGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAACGGCATCAGTGGGTGTaGGAGCGGGTGCGATCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GELRDGKASLQSSTLKIKRHQWV*ERVRSG Trigger: TCCGGATCGCACCCGCTCCCACACCCACTGATGCCG...TTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCCCATCTCTGAGCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGCCTCCACAGGACCCTaGCACTCAGGCTGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPNMDHSHSPECDYPIHSASTGP*HSGCGS Trigger: GGAGCCACAGCCTGAGTGCCAGGGTCCTGTGGAGGC...TGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACACCACCTGCTGCTGGGTaGGTTCCAGGAAGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKASLQSSTLKIKVPHSTPPAAG*VPGRSQ Trigger: CTGGCTCCTTCCTGGAACCCACCCAGCAGCAGGTGG...TGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCGGTAGCTCCTCCATCTaGCTTTCCGTCCCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLSSQALSKSKSLTPQAGSSSI*LSVPAS Trigger: GGAGGCTGGGACGGAAAGCCAGATGGAGGAGCTACC...GGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | CCACTCCACAAATACTACTGCAGGAAGCCTGCTTCTGGCTGGAGAGCTCAGAGAGGTAGCTCCTCCATCTaGCTTTCCGTCCCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLHKYYCRKPASGWRAQRGSSSI*LSVPAS Trigger: GGAGGCTGGGACGGAAAGCCAGATGGAGGAGCTACC...TCTCTGAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTGCGCATAGTGCAGCGTaGTCTCCTCGGCCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQNQSPSLHRPWVSSQHSAHSAA*SPRPEH Trigger: GTGCTCTGGCCGAGGAGATCACGCTGCACTATGCGC...AGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCTCACCGGCTTCATaGAGCTCTTCAGCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRPLSSQALSKSKSLTPQASPAS*SSSAAW Trigger: CCAGGCAGCTGAAGAGCTGCATGAAGCCGGTGAGGC...CTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGGGTCTCATCTCAACACTCTGCAGCCTCCACCTGCTaGTGGGTGGGTTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQNQSPSLHRPWVSSQHSAASTC*WVGSRK Trigger: CTTCCTGGAACCCACCCAGCAGCAGGTGGAGGCTGC...AGAGTGTTGAGATGAGACCCAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACATGCGGCCATGGTTGTTaGCCCAGAAAGTGCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKASLQSSTLKIKVPHSTCGHGC*PRKCPR Trigger: CCGAGGGCACTTTCTGGGCCAACAACCATGGCCGCA...TGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | GTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATTGCGGCCATGGTTGTTaGCCCAGAAAGTGCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTTLYTQAQTGDQHSKTHCGHGC*PRKCPR Trigger: CCGAGGGCACTTTCTGGGCCAACAACCATGGCCGCA...ATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | ACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTGCAGCTGCTGCTGCTaGGGCAGCCCTTCGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TTLYTQAQTGDQHSKTHHCSCCC*GSPSAS Trigger: TGATGCCGAAGGGCTGCCCCAGCAGCAGCAGCTGCA...ATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGAATGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGAGACTTCAGTCCCTGTaGGACCAAGGAGGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPECDYPIHSGPNRRPAQRLQSL*DQGGQD Trigger: GTCCTGCCCTCCTTGGTCCCACAGGGACTGAAGTCT...CTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTAGTATGCCCAGGGCATaGGTGGGGGAAGTGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPTWTTAIPQNVTTLYTSMPRA*VGEVPS Trigger: GGAAGGCACTTCCCCCACTCATGCCCTGGGCATACT...AGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | GATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCTTCCTTCTTCAAAAGGCCTaGGCCTCACCGGCTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: DPQGHIEEAAVGMAVAIFLLQKA*ASPASC Trigger: GCATGAAGCCGGTGAGGCGCAGGCCTTTTGAAGAAG...GAAGATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGACCCAGGCCACAGGTTaGTGGAAGAATCCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSSQALSKSKSLTPQALTQATG*WKNPDG Trigger: GCCATCAGGATTCTTCCAGCAACCTGTGGCCTGGGT...CAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAGAGCGGCAACGAAAATGTaGGCACCAGGTAAAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGNCAPRPAHDHSPSSRAATKM*APGKTP Trigger: GGGGGTTTTACCTGGTGCCCACATTTTCGTTGCCGC...TCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACACTGATGGCAGGTGCCTaGCGGACCTCTGTAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CDYPIHSGPNRRPAQQDTLMAGA*RTSVKA Trigger: GGCTTTTACAGAGGTCCGCCAGGCACCTGCCATCAG...TGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCTGGAGAGCTCAGAGATGGGAAGGCCTCTCTCCAGTCAAGCACTCTCAACTCCCCCTCGTCATCTaGGTCTTCAGTGTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGWRAQRWEGLSPVKHSQLPLVI*VFSVLD Trigger: ATCAAGGACACTGAAGACCCAGATGACGAGGGGGAG...TTGAGAGTGCTTGACTGGAGAGAGGCCTTCCCATCTCTGAGCTCTCCAGCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAGAAGAGCGCTCTGCCCATaGAACCCACACATCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGNCAPRPAHDHSPSSRRALCP*NPHISH Trigger: ATGGGAGATGTGTGGGTTCCATGGGCAGAGCGCTCT...TCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCTGGAGAGCTCAGAGATGGGAAGGCCTCTCTCCAGTCAAGCACTCTCAATCAGGTGCAGAGACTTaGTGTCCTTGCCCATCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGWRAQRWEGLSPVKHSQSGAET*CPCPSL Trigger: AAGGGATGGGCAAGGACACCAAGTCTCTGCACCTGA...TTGAGAGTGCTTGACTGGAGAGAGGCCTTCCCATCTCTGAGCTCTCCAGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAGAAGTACACCCAAAGTTTaGGTCAAGGGCCCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGNCAPRPAHDHSPSSRSTPKV*VKGPQS Trigger: GCTCTGGGGGCCCTTGACCCAAACTTTGGGTGTACT...TCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGAATGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGGGATTCTCAGTGAACTaGCCCTGTGTTCCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SPECDYPIHSGPNRRPAQGFSVN*PCVPRT Trigger: GGTTCTGGGAACACAGGGTCAGTTCACTGAGAATCC...CTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGGGATTCTCAGTGAACTaGCCCTGTGTTCCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PLSSQALSKSKSLTPQALGFSVN*PCVPRT Trigger: GGTTCTGGGAACACAGGGTCAGTTCACTGAGAATCC...CAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | GATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCTTCTCCTGGGAGTTCACATaGGGCTTGGCTACACTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPQGHIEEAAVGMAVAIFSWEFT*GLATLD Trigger: GTCTAGTGTAGCCAAGCCTCATGTGAACTCCCAGGA...GAAGATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCTGTTGGCCCAGAAAGTaGCCTCGGGGGTCTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PIHSGPNRRPAQQDTSFLCWPRK*PRGSHS Trigger: GCTATGAGACCCCCGAGGGCACTTTCTGGGCCAACA...GAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCAAGCCACAGGTGGGTTaGTTCTGGGGATGTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSSQALSKSKSLTPQAKPQVG*FWGCHL Trigger: AAGGTGACATCCCCAGAAGCAACCCACCTGTGGCTT...GGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CCACAAATACTACTGCAGGAAGCCTGCTTCTGGCTGGAGAGCTCAGAGATGGGAAAGCCACAGGTGGGTTaGTTCTGGGGATGTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQILLQEACFWLESSEMGKPQVG*FWGCHL Trigger: AAGGTGACATCCCCAGAAGCAACCCACCTGTGGCTT...TCCCATCTCTGAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | CACTCCACAAATACTACTGCAGGAAGCCTGCTTCTGGCTGGAGAGCTCAGAGATACCCAGGCCACAGGTTaGTGGAAGAATCCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSTNTTAGSLLLAGELRDTQATG*WKNPDG Trigger: GCCATCAGGATTCTTCCAGCAACCTGTGGCCTGGGT...ATCTCTGAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | GGGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACACCTCCCCAGGGGACTTaGTCATCCCAACTATTACCC | + |
|
Preference number: 4 (lower is better) Translates to: GKASLQSSTLKIKVPHSTPPQGT*SSQLLP Trigger: GGGTAATAGTTGGGATGAGCAAGTCCCCTGGGGAGG...TGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCCTCCCCAGGGGACTTaGTCATCCCAACTATTACCC | + |
|
Preference number: 4 (lower is better) Translates to: TAIPQNVTTLYTQAQTGDPPQGT*SSQLLP Trigger: GGGTAATAGTTGGGATGAGCAAGTCCCCTGGGGAGG...GTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCAGCAAAGGGCAGCTaGAAGGCAAAGCGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CDYPIHSGPNRRPAQQDTSAKGS*KAKRSV Trigger: CACTGACCGCTTTGCCTTCCAGCTGCCCTTTGCTGA...TGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGAGCTCTGATGGCAGGTGCCTaGCGGACCTCTGTAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPKQETSTARHIISHRALMAGA*RTSVKA Trigger: GGCTTTTACAGAGGTCCGCCAGGCACCTGCCATCAG...AGCTCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCTGGAGAGCTCAGAGATGGGAAGGCCTCTCTCCAGTCAAGCACTCTCAAGCCCATCCCTTTCTCTaGATTCTCAGTGAACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SGWRAQRWEGLSPVKHSQAHPFL*ILSELT Trigger: GGTCAGTTCACTGAGAATCCAGAGAAAGGGATGGGC...TTGAGAGTGCTTGACTGGAGAGAGGCCTTCCCATCTCTGAGCTCTCCAGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | GTATTCCACTCCACAAATACTACTGCAGGAAGCCTGCTTCTGGCTGGAGAGCTCGGACTCTGCTCTTGCTaGACTGGTAGAGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFHSTNTTAGSLLLAGELGLCSC*TGRGSS Trigger: AGAGCTGCCTCTACCAGTCCAGCAAGAGCAGAGTCC...GAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGGAGTGGAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR TCA 90 bp | TGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCCTGGGAGTTCACATaGGGCTTGGCTACACTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CDYPIHSGPNRRPAQQDTSWEFT*GLATLD Trigger: GTCTAGTGTAGCCAAGCCTCATGTGAACTCCCAGGA...TGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | GGGGGCATGCCTGGTTCCATTCTAAAATTTCTCACACCATCCACCATTGTATTCCAGGAGGGGATCTCCTaGTCCTGTTCCTCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGMPGSILKFLTPSTIVFQEGIS*SCSSHS Trigger: GGAGTGGGAGGAACAGGAGCAGGAGATCCCCTCCTG...GAATACAATGGTGGATGGTGTGAGAAATTTTAGAATGGAACCAGGCATGCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | TGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACAAATCCTGATGGCAGGTaGCTGGCGGACCTCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CDYPIHSGPNRRPAQQDTNPDGR*LADLCK Trigger: TTTACAGAGGTCCGCCAGGCACCTGCCATCAGGATT...TGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | TATCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAAATCCTGATGGCAGGTaGCTGGCGGACCTCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YLWVIVPQDQLMTTLPHPNPDGR*LADLCK Trigger: TTTACAGAGGTCCGCCAGGCACCTGCCATCAGGATT...TGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | TCCCCAGAATGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCAGCACAGGAGACTTGGTGTCCTTaGCCATCCCTTTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPECDYPIHSGPNRRPAQETWCP*PSLSLD Trigger: ATCCAGAGAAAGGGATGGGCAAGGACACCAAGTCTC...CTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTAGGAGGGCAGGACTCTaGTCTTGCTGGACTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPTWTTAIPQNVTTLYTRRAGL*SCWTGR Trigger: TCTACCAGTCCAGCAAGAGCAGAGTCCTGCCCTCCT...AGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | TCTCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTGCGGCAACGAAAATGTaGGCACCAGGTAAAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPTWTTAIPQNVTTLYTAATKM*APGKTP Trigger: GGGGGTTTTACCTGGTGCCCACATTTTCGTTGCCGC...AGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | CCACTCCACAAATACTACTGCAGGAAGCCTGCTTCTGGCTGGAGAGCTCAGAGACAGGTGGGTTGCTTCTaGGGATGTCACCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLHKYYCRKPASGWRAQRQVGCF*GCHLLL Trigger: AAGAAGAAGGTGACATCCCCAGAAGCAACCCACCTG...TCTCTGAGCTCTCCAGCCAGAAGCAGGCTTCCTGCAGTAGTATTTGTGGAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCTGGAGAGCTCAGAGATGGGAAGGCCTCTCTCCAGTCAAGCACTCTCAACCAACTCCTGGTCAATaGTGTCTTCACCAAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SGWRAQRWEGLSPVKHSQPTPGQ*CLHQAT Trigger: AGTTGCTTGGTGAAGACACCATTGACCAGGAGTTGG...TTGAGAGTGCTTGACTGGAGAGAGGCCTTCCCATCTCTGAGCTCTCCAGCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCTCCCCCTCGTCATCTaGGTCTTCAGTGTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TAIPQNVTTLYTQAQTGDLPLVI*VFSVLD Trigger: ATCAAGGACACTGAAGACCCAGATGACGAGGGGGAG...GTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | CCTATACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCAGAGCGCTCTGCCCATaGAACCCACACATCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PIHSGPNRRPAQQDTSFLRALCP*NPHISH Trigger: ATGGGAGATGTGTGGGTTCCATGGGCAGAGCGCTCT...GAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGTATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGGGTAATTGTGCCCCAAGACCAGCTCATGACCACTCTCCCTCATCCAGAGCCCATCCCTTTCTCTaGATTCTCAGTGAACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SLGNCAPRPAHDHSPSSRAHPFL*ILSELT Trigger: GGTCAGTTCACTGAGAATCCAGAGAAAGGGATGGGC...TCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGGGGCACAATTACCCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAAGTACACCCAAAGTTTaGGTCAAGGGCCCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNMDHSHSPECDYPIHSSTPKV*VKGPQS Trigger: GCTCTGGGGGCCCTTGACCCAAACTTTGGGTGTACT...TGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR GCA 90 bp | ACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGAAGGAGGGCAGGACTCTaGTCTTGCTGGACTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLRPKQETSTARHIISHRRRAGL*SCWTGR Trigger: TCTACCAGTCCAGCAAGAGCAGAGTCCTGCCCTCCT...TCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTGGTCAAGAGGCATTCTTACTGTCACTTAATGTTCCATGTGTTTCATCCAGCCTCCACAGGACCCTaGCACTCAGGCTGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLVKRHSYCHLMFHVFHPASTGP*HSGCGS Trigger: GGAGCCACAGCCTGAGTGCCAGGGTCCTGTGGAGGC...TGGATGAAACACATGGAACATTAAGTGACAGTAAGAATGCCTCTTGACCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCCAACTCCTGGTCAATaGTGTCTTCACCAAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSSQALSKSKSLTPQAPTPGQ*CLHQAT Trigger: AGTTGCTTGGTGAAGACACCATTGACCAGGAGTTGG...GGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | ACACCCACAAGCCACACCCAAAGGGATCACTATTGGATGATGGATCACAGACACTCAGGTGCAGAGACTTaGTGTCCTTGCCCATCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPTSHTQRDHYWMMDHRHSGAET*CPCPSL Trigger: AAGGGATGGGCAAGGACACCAAGTCTCTGCACCTGA...GTGTCTGTGATCCATCATCCAATAGTGATCCCTTTGGGTGTGGCTTGTGGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | CCATATACACAGACACAGGCTCCCAGACAAAATATGCACGACCAAAGGACCACAGGACTCTGCTCTTGCTaGACTGGTAGAGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PYTQTQAPRQNMHDQRTTGLCSC*TGRGSS Trigger: AGAGCTGCCTCTACCAGTCCAGCAAGAGCAGAGTCC...TGTGGTCCTTTGGTCGTGCATATTTTGTCTGGGAGCCTGTGTCTGTGTATATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGGCCCAAACAGGAGACCATGGGAGACCTCTTTaGGGACTCAAGATTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAIPQNVTTLYTQAQTGDHGRPL*GLKIQA Trigger: AGCCTGAATCTTGAGTCCCCAAAGAGGTCTCCCATG...GTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR TCA 90 bp | ACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGAATAACTTCGGGCACCTaGAGTGTCATCTGGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPKQETSTARHIISHRITSGT*SVIWGH Trigger: ATGGCCCCAGATGACACTTCAGGTGCCCGAAGTTAT...TCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115742.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTCCAGTCAAGCACTCTCAAAATCAAAGTCCCTCACTCCACAGGCCCTGATTACCCTATTCAGGTaGAGAGACTTGGTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSSQALSKSKSLTPQALITLFR*RDLVSL Trigger: CAAGGACACCAAGTCTCTGCACCTGAATAGGGTAAT...CAGGGCCTGTGGAGTGAGGGACTTTGATTTTGAGAGTGCTTGACTGGAGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTGGTCAAGAGGCATTCTTACTGTCACTTAATGTTCCATGTGTTTCATCCACCACCTGCTGCTGGGTaGGTTCCAGGAAGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLVKRHSYCHLMFHVFHPPPAAG*VPGRSQ Trigger: CTGGCTCCTTCCTGGAACCCACCCAGCAGCAGGTGG...TGGATGAAACACATGGAACATTAAGTGACAGTAAGAATGCCTCTTGACCAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | ACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGAGAGACTTGGTGTCCTTaGCCATCCCTTTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPKQETSTARHIISHRETWCP*PSLSLD Trigger: ATCCAGAGAAAGGGATGGGCAAGGACACCAAGTCTC...TCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | AACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGGCCCAATTACCCTATTCAGGTaGAGAGACTTGGTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NMDHSHSPECDYPIHSGPITLFR*RDLVSL Trigger: CAAGGACACCAAGTCTCTGCACCTGAATAGGGTAAT...TGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGCCCTGGCTTTTCTATCATTTTTCATACATTCTAGGATTAAGTCCTTCAGCCCTTCGGCATCAGTaGGTGTGGGAGCGGGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRPWLFYHFSYILGLSPSALRHQ*VWERVR Trigger: TCGCACCCGCTCCCACACCCACTGATGCCGAAGGGC...TGAAGGACTTAATCCTAGAATGTATGAAAAATGATAGAAAAGCCAGGGCCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | ACACTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGACGCACTCCTCATCCTTaGCTCTTCTTCAAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPKQETSTARHIISHRRTPHP*LFFKRP Trigger: AGGCCTTTTGAAGAAGAGCCAAGGATGAGGAGTGCG...TCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | CCAAGACCAGCTCATGACCACTCTCCCTCATCCAGAGAATTATACAAAAATAAATGTTGGCCCAGAAAGTaGCCTCGGGGGTCTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRPAHDHSPSSRELYKNKCWPRK*PRGSHS Trigger: GCTATGAGACCCCCGAGGGCACTTTCTGGGCCAACA...TTTATTTTTGTATAATTCTCTGGATGAGGGAGAGTGGTCATGAGCTGGTCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR GCA 90 bp | GTTAAAGGTACTTCCATTGTCTTCTCCCAAAATGTCACTTTTGTACCTTGGTCAGCCTCACCGGCTTCATaGAGCTCTTCAGCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKGTSIVFSQNVTFVPWSASPAS*SSSAAW Trigger: CCAGGCAGCTGAAGAGCTGCATGAAGCCGGTGAGGC...TGACCAAGGTACAAAAGTGACATTTTGGGAGAAGACAATGGAAGTACCTTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | GGGGGCATGCCTGGTTCCATTCTAAAATTTCTCACACCATCCACCATTGTATTCCATGGGAGACCTCTTTaGGGACTCAAGATTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGMPGSILKFLTPSTIVFHGRPL*GLKIQA Trigger: AGCCTGAATCTTGAGTCCCCAAAGAGGTCTCCCATG...GAATACAATGGTGGATGGTGTGAGAAATTTTAGAATGGAACCAGGCATGCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| 3UTR CAA 72 bp | AGAGATGACCAACTGTCAAATGCTGCCAGGAAGCCATaGAAGACATATGGGTTTATCTGTTGCAGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDDQLSNAARKP*KTYGFICCSNS Trigger: GCTGTTGCTGCAACAGATAAACCCATATGTCTTCAATGGCTTCCTGGCAGCATTTGACAGTTGGTCATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | ACCTTGGTCAAGAGGCATTCTTACTGTCACTTAATGTTCCATGTGTTTCATCCACGCACTCCTCATCCTTaGCTCTTCTTCAAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVKRHSYCHLMFHVFHPRTPHP*LFFKRP Trigger: AGGCCTTTTGAAGAAGAGCCAAGGATGAGGAGTGCG...TGGATGAAACACATGGAACATTAAGTGACAGTAAGAATGCCTCTTGACCAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS-3UTR CCA 90 bp | ATGCTTGGCGACTTTATGATCATCTCCTTGCTTTCTTTACATTATCTGTCATGGCAGGTGGGTTGCTTCTaGGGATGTCACCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLGDFMIISLLSLHYLSWQVGCF*GCHLLL Trigger: AAGAAGAAGGTGACATCCCCAGAAGCAACCCACCTG...CCATGACAGATAATGTAAAGAAAGCAAGGAGATGATCATAAAGTCGCCAAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CAA 72 bp | AAGGTACTTCCATTGTCTTCTCCCAAAATGTCACTTTaGTACCTTGGTCAAGAGGCATTCTTACTGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KVLPLSSPKMSL*YLGQEAFLLSL Trigger: AAGTGACAGTAAGAATGCCTCTTGACCAAGGTACAAAAGTGACATTTTGGGAGAAGACAATGGAAGTACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| 3UTR CAA 72 bp | TTCCATTGTCTTCTCCCAAAATGTCACTTTTGTACCTaGGTCAAGAGGCATTCTTACTGTCACTTAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FHCLLPKCHFCT*VKRHSYCHLMF Trigger: GAACATTAAGTGACAGTAAGAATGCCTCTTGACCAAGGTACAAAAGTGACATTTTGGGAGAAGACAATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS GCA 90 bp | CCCGGGATCCAGGAGGGGATCTCCTGCTCCTGTTCCTCCCACTCCTaGCCCAGGCGGGCTGCGTGGGACATAGCGGGCTGGGTGGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: PGIQEGISCSCSSHS*PRRAAWDIAGWVVA Trigger: TGCGACCACCCAGCCCGCTATGTCCCACGCAGCCCGCCTGGGGCAGGAGTGGGAGGAACAGGAGCAGGAGATCCCCTCCTGGATCCCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 90 bp | GGGTGGTCGCAGAAGGTAGCCCAACCGTCGTGTGAGGCCCGCACGTaGACCGCCTTCTCGAAGGAGCGGTTCAGCACGCGCACCAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: GWSQKVAQPSCEART*TAFSKERFSTRTNP Trigger: CGGGTTGGTGCGCGTGCTGAACCGCTCCTTCGAGAAGGCGGTGCACGTGCGGGCCTCACACGACGGTTGGGCTACCTTCTGCGACCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 90 bp | CGCTCGCGCCCTCAGCAAAGGGCAGCTGGAAGGCAAAGCGGTCAGTaGAGCCACCGTCGTCGGGTGAGGAGGCTGACATCTGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRPQQRAAGRQSGQ*SHRRRVRRLTSGQG Trigger: GCCCTGGCCAGATGTCAGCCTCCTCACCCGACGACGGTGGCTGCACTGACCGCTTTGCCTTCCAGCTGCCCTTTGCTGAGGGCGCGAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | GCTGCAGCTGCTGCTGCTGGGGCAGCCCTTCGGCATCAGTGGGTGTaGGAGCGGGTGCGATCCGGAGCAGGACAGTGTAGTTGCGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAAGAALRHQWV*ERVRSGAGQCSCGH Trigger: ATGGCCGCAACTACACTGTCCTGCTCCGGATCGCACCCGCTCCCACACCCACTGATGCCGAAGGGCTGCCCCAGCAGCAGCAGCTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | CCAGCTGCTGCAGCTGCTGCTGCTGGGGCAGCCCTTCGGCATCAGTaGGTGTGGGAGCGGGTGCGATCCGGAGCAGGACAGTGTAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PAAAAAAAGAALRHQ*VWERVRSGAGQCSC Trigger: GCAACTACACTGTCCTGCTCCGGATCGCACCCGCTCCCACACCCACTGATGCCGAAGGGCTGCCCCAGCAGCAGCAGCTGCAGCAGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS TCA 90 bp | GACATAGCGGGCTGGGTGGTCGCAGAAGGTAGCCCAACCGTCGTGTaGGGCCCGCACGTGCACCGCCTTCTCGAAGGAGCGGTTCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DIAGWVVAEGSPTVV*GPHVHRLLEGAVQH Trigger: GTGCTGAACCGCTCCTTCGAGAAGGCGGTGCACGTGCGGGCCTCACACGACGGTTGGGCTACCTTCTGCGACCACCCAGCCCGCTATGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 90 bp | CTGCTGCTGGGGCAGCCCTTCGGCATCAGTGGGTGTGGGAGCGGGTaGGATCCGGAGCAGGACAGTGTAGTTGCGGCCATGGTTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLGQPFGISGCGSG*DPEQDSVVAAMVVG Trigger: GCCAACAACCATGGCCGCAACTACACTGTCCTGCTCCGGATCGCACCCGCTCCCACACCCACTGATGCCGAAGGGCTGCCCCAGCAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS TCA 90 bp | GGCCACTTCAAGATCAGGTCACGGTCTGTGAGTATGCCCAGGGCATaGGTGGGGGAAGTGCCTTCCCCGCCACCCGCCGCTGCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHFKIRSRSVSMPRA*VGEVPSPPPAAATA Trigger: AGCTGTGGCAGCGGCGGGTGGCGGGGAAGGCACTTCCCCCACTCATGCCCTGGGCATACTCACAGACCGTGACCTGATCTTGAAGTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS GCA 90 bp | GGAGCAGGACAGTGTAGTTGCGGCCATGGTTGTTGGCCCAGAAAGTaGCCTCGGGGGTCTCATAGCGCACCACGAAGTCGAGGCGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGQCSCGHGCWPRK*PRGSHSAPRSRGAP Trigger: GGGCGCGCCTCGACTTCGTGGTGCGCTATGAGACCCCCGAGGGCACTTTCTGGGCCAACAACCATGGCCGCAACTACACTGTCCTGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 90 bp | TCTTCAAAAGGCCTGCGCCTCACCGGCTTCATGCAGCTCTTCAGCTaGCTGGCCTCAGCCTCCACAGGACCCTGGCACTCAGGCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKGLRLTGFMQLFS*LASASTGPWHSGCG Trigger: GCCACAGCCTGAGTGCCAGGGTCCTGTGGAGGCTGAGGCCAGGCAGCTGAAGAGCTGCATGAAGCCGGTGAGGCGCAGGCCTTTTGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 90 bp | GGGGCCTTTCGACCCCCTCCACTTTCCCACGCAGCCTCCACCTGCTaGTGGGTGGGTTCCAGGAAGGAGCCAGCAGCTCTATCACTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAFRPPPLSHAASTC*WVGSRKEPAALSLA Trigger: TGCAAGTGATAGAGCTGCTGGCTCCTTCCTGGAACCCACCCAGCAGCAGGTGGAGGCTGCGTGGGAAAGTGGAGGGGGTCGAAAGGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | TTCGACCCCCTCCACTTTCCCACGCAGCCTCCACCTGCTGCTGGGTaGGTTCCAGGAAGGAGCCAGCAGCTCTATCACTTGCATCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FDPLHFPTQPPPAAG*VPGRSQQLYHLHRA Trigger: GGCCCGATGCAAGTGATAGAGCTGCTGGCTCCTTCCTGGAACCCACCCAGCAGCAGGTGGAGGCTGCGTGGGAAAGTGGAGGGGGTCGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | GCCTTTCGACCCCCTCCACTTTCCCACGCAGCCTCCACCTGCTGCTaGGTGGGTTCCAGGAAGGAGCCAGCAGCTCTATCACTTGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: AFRPPPLSHAASTCC*VGSRKEPAALSLAS Trigger: CGATGCAAGTGATAGAGCTGCTGGCTCCTTCCTGGAACCCACCCAGCAGCAGGTGGAGGCTGCGTGGGAAAGTGGAGGGGGTCGAAAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS GCA 90 bp | TCATCCTTGGCTCTTCTTCAAAAGGCCTGCGCCTCACCGGCTTCATaGAGCTCTTCAGCTGCCTGGCCTCAGCCTCCACAGGACCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLALLQKACASPAS*SSSAAWPQPPQDPG Trigger: GCCAGGGTCCTGTGGAGGCTGAGGCCAGGCAGCTGAAGAGCTGCATGAAGCCGGTGAGGCGCAGGCCTTTTGAAGAAGAGCCAAGGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 90 bp | ATAGGGGCCTTTCGACCCCCTCCACTTTCCCACGCAGCCTCCACCTaGTGCTGGGTGGGTTCCAGGAAGGAGCCAGCAGCTCTATCACTT | + |
|
Preference number: 5 (lower is better) Translates to: IGAFRPPPLSHAAST*CWVGSRKEPAALSL Trigger: AAGTGATAGAGCTGCTGGCTCCTTCCTGGAACCCACCCAGCAGCAGGTGGAGGCTGCGTGGGAAAGTGGAGGGGGTCGAAAGGCCCCTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | CCAGAGCTGAGGAGCCAACCCACACGCACATTCTGCAGGGGCCGCTaGCATGGGAGACCTCTTTGGGGACTCAAGATTCAGGCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PELRSQPTRTFCRGR*HGRPLWGLKIQAST Trigger: GGTGGAAGCCTGAATCTTGAGTCCCCAAAGAGGTCTCCCATGCCAGCGGCCCCTGCAGAATGTGCGTGTGGGTTGGCTCCTCAGCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | CCACCCAGGCCACAGGTTGCTGGAAGAATCCTGATGGCAGGTGCCTaGCGGACCTCTGTAAAAGCCACAGGTGGGTTGCTTCTGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PPRPQVAGRILMAGA*RTSVKATGGLLLGM Trigger: CATCCCCAGAAGCAACCCACCTGTGGCTTTTACAGAGGTCCGCCAGGCACCTGCCATCAGGATTCTTCCAGCAACCTGTGGCCTGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | CTAGGTACCCAGCTGCTTTCCCGCTCAGTAGGTAGCTCCTCCATCTaGCTTTCCGTCCCAGCCTCCCCAGGGGACTTGCTCATCCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: LGTQLLSRSVGSSSI*LSVPASPGDLLIPT Trigger: AGTTGGGATGAGCAAGTCCCCTGGGGAGGCTGGGACGGAAAGCCAGATGGAGGAGCTACCTACTGAGCGGGAAAGCAGCTGGGTACCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | CCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGGCCTTGCGGCCATGGTTGTaGGCCCAGAAAGTGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PTWTTAIPQNVTTLYTQALRPWL*AQKVPS Trigger: CGAGGGCACTTTCTGGGCCAACAACCATGGCCGCAA...GGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | AATCCTGATGGCAGGTGCCTGGCGGACCTCTGTAAAAGCCACAGGTaGGTTGCTTCTGGGGATGTCACCTTCTTCTTGAGGGTTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NPDGRCLADLCKSHR*VASGDVTFFLRVAG Trigger: ACCAGCAACCCTCAAGAAGAAGGTGACATCCCCAGAAGCAACCCACCTGTGGCTTTTACAGAGGTCCGCCAGGCACCTGCCATCAGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | ATCTCCCATAGTAGCTATCACAGAGCGGGCTCCAGAGAGGATTTCTaGAGGCGATTCCTTAGGGCTGCCCCCTTCAGGGCTAGAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ISHSSYHRAGSREDF*RRFLRAAPFRARRS Trigger: ACTCCTTCTAGCCCTGAAGGGGGCAGCCCTAAGGAATCGCCTCCAGAAATCCTCTCTGGAGCCCGCTCTGTGATAGCTACTATGGGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | CAGAACCACTGGGCTATCACATCTAGAGCTAGAGCGCTCTGCCCATaGAACCCACACATCTCCCATAGTAGCTATCACAGAGCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QNHWAITSRARALCP*NPHISHSSYHRAGS Trigger: GGAGCCCGCTCTGTGATAGCTACTATGGGAGATGTGTGGGTTCCATGGGCAGAGCGCTCTAGCTCTAGATGTGATAGCCCAGTGGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | AGGGGTCTCCCTGCTAGTGTCAAAAGCTGCAGTCACCTCCAAACCTTGTCGCTAGGGTCTTCAGTGTCCTaGATGAGCTCCACGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGLPASVKSCSHLQTLSLGSSVS*MSSTPQ Trigger: CTGTGGCGTGGAGCTCATCAAGGACACTGAAGACCC...TAGCGACAAGGTTTGGAGGTGACTGCAGCTTTTGACACTAGCAGGGAGACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | GATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCTTCCAGTACACCCAAAGTTaGGGTCAAGGGCCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DPQGHIEEAAVGMAVAIFQYTQS*GQGPPE Trigger: CTCTGGGGGCCCTTGACCCAAACTTTGGGTGTACTG...GAAGATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | GATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCTTCAAAGCCACAGGTGGGTaGCTTCTGGGGATGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: DPQGHIEEAAVGMAVAIFKATGG*LLGMSP Trigger: AGGTGACATCCCCAGAAGCAACCCACCTGTGGCTTT...GAAGATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | TCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTCACAGCAGCTCTATCACTaGCATCGGGCCCTGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPNMDHSHSPECDYPIHSQQLYH*HRALRP Trigger: AGGCCTCAGGGCCCGATGCAAGTGATAGAGCTGCTG...TGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | ACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGGCCCAAACAGGAGACGGGTCTTCAGTGTCCTaGATGAGCTCCACGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TAIPQNVTTLYTQAQTGDGSSVS*MSSTPQ Trigger: CTGTGGCGTGGAGCTCATCAAGGACACTGAAGACCC...GTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | ACAGATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCTTCAGGTGCAGAGACTaGGTGTCCTTGCCCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TDPQGHIEEAAVGMAVAIFRCRD*VSLPIP Trigger: AGGGATGGGCAAGGACACCAAGTCTCTGCACCTGAA...GATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | ACAGATCCTCAAGGACACATTGAAGAGGCAGCAGTAGGTATGGCCGTGGCCATCGCATGGGAGACCTCTTaGGGGACTCAAGATTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDPQGHIEEAAVGMAVAIAWETS*GTQDSG Trigger: GCCTGAATCTTGAGTCCCCAAAGAGGTCTCCCATGC...GATGGCCACGGCCATACCTACTGCTGCCTCTTCAATGTGTCCTTGAGGATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
||
| CDS GCA 90 bp | TGTTCCCAGAACCACTGGGCTATCACATCTAGAGCTAGAGCGCTCTaGCCATGGAACCCACACATCTCCCATAGTAGCTATCACAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSQNHWAITSRARAL*PWNPHISHSSYHRA Trigger: CGCTCTGTGATAGCTACTATGGGAGATGTGTGGGTTCCATGGGCAGAGCGCTCTAGCTCTAGATGTGATAGCCCAGTGGTTCTGGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | CTCAGGCCCAAACAGGAGACCAGCACAGCAAGACACATCATTTCTCATAGAGCTGCCTCCCCAGGGGACTaGCTCATCCCAACTATTACC | + |
|
Preference number: 5 (lower is better) Translates to: LRPKQETSTARHIISHRAASPGD*LIPTIT Trigger: GGTAATAGTTGGGATGAGCAAGTCCCCTGGGGAGGC...AGCTCTATGAGAAATGATGTGTCTTGCTGTGCTGGTCTCCTGTTTGGGCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | TCTCTCCCAACATGGACCACAGCCATTCCCCAGAATGTGACTACCCTATACACTCAGTACACCCAAAGTTaGGGTCAAGGGCCCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SLPTWTTAIPQNVTTLYTQYTQS*GQGPPE Trigger: CTCTGGGGGCCCTTGACCCAAACTTTGGGTGTACTG...AGTGTATAGGGTAGTCACATTCTGGGGAATGGCTGTGGTCCATGTTGGGAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 90 bp | TTTCTCTGGATTCTCAGTGAACTGACCCTGTGTTCCCAGAACCACTaGGCTATCACATCTAGAGCTAGAGCGCTCTGCCCATGGAACCCA | + |
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Preference number: 5 (lower is better) Translates to: FLWILSELTLCSQNH*AITSRARALCPWNP Trigger: TGGGTTCCATGGGCAGAGCGCTCTAGCTCTAGATGTGATAGCCCAGTGGTTCTGGGAACACAGGGTCAGTTCACTGAGAATCCAGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGCTCAGAGATGGGAAGGCCTCTCTCCAGTCAAGCACTCTCAAAATCAAAAAAGCCACAGGTGGGTaGCTTCTGGGGATGTCACCT | + |
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Preference number: 5 (lower is better) Translates to: GELRDGKASLQSSTLKIKKATGG*LLGMSP Trigger: AGGTGACATCCCCAGAAGCAACCCACCTGTGGCTTT...TTTGATTTTGAGAGTGCTTGACTGGAGAGAGGCCTTCCCATCTCTGAGCTCTCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | GGGGGCATGCCTGGTTCCATTCTAAAATTTCTCACACCATCCACCATTGTATTCTTCAGGTGCAGAGACTaGGTGTCCTTGCCCATCCCT | + |
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Preference number: 5 (lower is better) Translates to: GGMPGSILKFLTPSTIVFFRCRD*VSLPIP Trigger: AGGGATGGGCAAGGACACCAAGTCTCTGCACCTGAA...GAATACAATGGTGGATGGTGTGAGAAATTTTAGAATGGAACCAGGCATGCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | CATGAAGAAAATGTCTCTCCCTTTCCACCCATAATGAGCTGCATATACATCCTCGCCTCCCCAGGGGACTaGCTCATCCCAACTATTACC | + |
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Preference number: 5 (lower is better) Translates to: HEENVSPFPPIMSCIYILASPGD*LIPTIT Trigger: GGTAATAGTTGGGATGAGCAAGTCCCCTGGGGAGGC...GAGGATGTATATGCAGCTCATTATGGGTGGAAAGGGAGAGACATTTTCTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | GTTAAAGGTACTTCCATTGTCTTCTCCCAAAATGTCACTTTTGTACCTTGGTCATTGCGGCCATGGTTGTaGGCCCAGAAAGTGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: VKGTSIVFSQNVTFVPWSLRPWL*AQKVPS Trigger: CGAGGGCACTTTCTGGGCCAACAACCATGGCCGCAA...TGACCAAGGTACAAAAGTGACATTTTGGGAGAAGACAATGGAAGTACCTTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS-3UTR CAA 90 bp | ATGCCTAGTAGGCCCTGGCTTTTCTATCATTTTTCATACATTCTAGGATTAAGTGCATGGGAGACCTCTTaGGGGACTCAAGATTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: MPSRPWLFYHFSYILGLSAWETS*GTQDSG Trigger: GCCTGAATCTTGAGTCCCCAAAGAGGTCTCCCATGC...ACTTAATCCTAGAATGTATGAAAAATGATAGAAAAGCCAGGGCCTACTAGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS CCA 72 bp | GGAGCGGTTCAGCACGCGCACCAACCCGCGCACCACTaGCGGGCGTCCCCCAGGCACCCACACCCCGGAACC | + |
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Preference number: 6 (lower is better) Translates to: GAVQHAHQPAHH*RASPRHPHPGT Trigger: GGTTCCGGGGTGTGGGTGCCTGGGGGACGCCCGCCAGTGGTGCGCGGGTTGGTGCGCGTGCTGAACCGCTCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 72 bp | CAGGAGGGGATCTCCTGCTCCTGTTCCTCCCACTCCTaGCCCAGGCGGGCTGCGTGGGACATAGCGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QEGISCSCSSHS*PRRAAWDIAGW Trigger: CCAGCCCGCTATGTCCCACGCAGCCCGCCTGGGGCAGGAGTGGGAGGAACAGGAGCAGGAGATCCCCTCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | GCAGCTGCTGCTGCTGGGGCAGCCCTTCGGCATCAGTaGGTGTGGGAGCGGGTGCGATCCGGAGCAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: AAAAAGAALRHQ*VWERVRSGAGQ Trigger: CTGTCCTGCTCCGGATCGCACCCGCTCCCACACCCACTGATGCCGAAGGGCTGCCCCAGCAGCAGCAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS TCA 72 bp | GGCTGGGTGGTCGCAGAAGGTAGCCCAACCGTCGTGTaGGGCCCGCACGTGCACCGCCTTCTCGAAGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: GWVVAEGSPTVV*GPHVHRLLEGA Trigger: CGCTCCTTCGAGAAGGCGGTGCACGTGCGGGCCTCACACGACGGTTGGGCTACCTTCTGCGACCACCCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS TCA 72 bp | GCTCCACGCCACAGCCCAGGCGCGCATAGTGCAGCGTaGTCTCCTCGGCCAGAGCACTGTTCAGGGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: APRHSPGAHSAA*SPRPEHCSGPS Trigger: AGAGGGCCCTGAACAGTGCTCTGGCCGAGGAGATCACGCTGCACTATGCGCGCCTGGGCTGTGGCGTGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS GCA 72 bp | CAGAAGGTAGCCCAACCGTCGTGTGAGGCCCGCACGTaGACCGCCTTCTCGAAGGAGCGGTTCAGCACGCGC | + |
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Preference number: 6 (lower is better) Translates to: QKVAQPSCEART*TAFSKERFSTR Trigger: GCGCGTGCTGAACCGCTCCTTCGAGAAGGCGGTGCACGTGCGGGCCTCACACGACGGTTGGGCTACCTTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 72 bp | GGGCAGCCCTTCGGCATCAGTGGGTGTGGGAGCGGGTaGGATCCGGAGCAGGACAGTGTAGTTGCGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: GQPFGISGCGSG*DPEQDSVVAAM Trigger: CATGGCCGCAACTACACTGTCCTGCTCCGGATCGCACCCGCTCCCACACCCACTGATGCCGAAGGGCTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 72 bp | GGCCTGCGCCTCACCGGCTTCATGCAGCTCTTCAGCTaGCTGGCCTCAGCCTCCACAGGACCCTGGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: GLRLTGFMQLFS*LASASTGPWHS Trigger: TGAGTGCCAGGGTCCTGTGGAGGCTGAGGCCAGGCAGCTGAAGAGCTGCATGAAGCCGGTGAGGCGCAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | GCTGCTGCTGGGGCAGCCCTTCGGCATCAGTGGGTGTaGGAGCGGGTGCGATCCGGAGCAGGACAGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: AAAGAALRHQWV*ERVRSGAGQCS Trigger: ACTACACTGTCCTGCTCCGGATCGCACCCGCTCCCACACCCACTGATGCCGAAGGGCTGCCCCAGCAGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS TCA 72 bp | AAGATCAGGTCACGGTCTGTGAGTATGCCCAGGGCATaGGTGGGGGAAGTGCCTTCCCCGCCACCCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: KIRSRSVSMPRA*VGEVPSPPPAA Trigger: AGCGGCGGGTGGCGGGGAAGGCACTTCCCCCACTCATGCCCTGGGCATACTCACAGACCGTGACCTGATCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS GCA 72 bp | CCTCAGCAAAGGGCAGCTGGAAGGCAAAGCGGTCAGTaGAGCCACCGTCGTCGGGTGAGGAGGCTGACATCT | + |
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Preference number: 6 (lower is better) Translates to: PQQRAAGRQSGQ*SHRRRVRRLTS Trigger: AGATGTCAGCCTCCTCACCCGACGACGGTGGCTGCACTGACCGCTTTGCCTTCCAGCTGCCCTTTGCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | CAGCTGCTTTCCCGCTCAGTAGGTAGCTCCTCCATCTaGCTTTCCGTCCCAGCCTCCCCAGGGGACTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QLLSRSVGSSSI*LSVPASPGDLL Trigger: GAGCAAGTCCCCTGGGGAGGCTGGGACGGAAAGCCAGATGGAGGAGCTACCTACTGAGCGGGAAAGCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CAA 90 bp | CAAAGCCACGGGGACCATAACGAGCCCAGCCAGTACACCCAAAGTTaGGGTCAAGGGCCCCCAGAGCTGAGGAGCCAACCCACACGCACA | + |
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Preference number: 6 (lower is better) Translates to: QSHGDHNEPSQYTQS*GQGPPELRSQPTRT Trigger: TGTGCGTGTGGGTTGGCTCCTCAGCTCTGGGGGCCCTTGACCCAAACTTTGGGTGTACTGGCTGGGCTCGTTATGGTCCCCGTGGCTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS GCA 72 bp | CAGTGTAGTTGCGGCCATGGTTGTTGGCCCAGAAAGTaGCCTCGGGGGTCTCATAGCGCACCACGAAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: QCSCGHGCWPRK*PRGSHSAPRSR Trigger: TCGACTTCGTGGTGCGCTATGAGACCCCCGAGGGCACTTTCTGGGCCAACAACCATGGCCGCAACTACACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | AGGAGCCAACCCACACGCACATTCTGCAGGGGCCGCTaGCATGGGAGACCTCTTTGGGGACTCAAGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: RSQPTRTFCRGR*HGRPLWGLKIQ Trigger: CTGAATCTTGAGTCCCCAAAGAGGTCTCCCATGCCAGCGGCCCCTGCAGAATGTGCGTGTGGGTTGGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | GGCAGGTGCCTGGCGGACCTCTGTAAAAGCCACAGGTaGGTTGCTTCTGGGGATGTCACCTTCTTCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GRCLADLCKSHR*VASGDVTFFLR Trigger: CCTCAAGAAGAAGGTGACATCCCCAGAAGCAACCCACCTGTGGCTTTTACAGAGGTCCGCCAGGCACCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | CCACAGGTTGCTGGAAGAATCCTGATGGCAGGTGCCTaGCGGACCTCTGTAAAAGCCACAGGTGGGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PQVAGRILMAGA*RTSVKATGGLL Trigger: AAGCAACCCACCTGTGGCTTTTACAGAGGTCCGCCAGGCACCTGCCATCAGGATTCTTCCAGCAACCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | CCTGTGGGACCAAGGAGGGCAGGACTCTGCTCTTGCTaGACTGGTAGAGGCAGCTCTTTCTCAGAACTAGGT | + |
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Preference number: 6 (lower is better) Translates to: PVGPRRAGLCSC*TGRGSSFSELG Trigger: ACCTAGTTCTGAGAAAGAGCTGCCTCTACCAGTCCAGCAAGAGCAGAGTCCTGCCCTCCTTGGTCCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CAA 90 bp | CATCAGGATGTTCTGCTAGGGTATTATCGTCCGCACTCCTCATCCTaGGCTCTTCTTCAAAAGGCCTGCGCCTCACCGGCTTCATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HQDVLLGYYRPHSSS*ALLQKACASPASCS Trigger: GCTGCATGAAGCCGGTGAGGCGCAGGCCTTTTGAAGAAGAGCCAAGGATGAGGAGTGCGGACGATAATACCCTAGCAGAACATCCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS TCA 72 bp | ACAGGTGGGTTGCTTCTGGGGATGTCACCTTCTTCTTaGGGGTTGCTGGTCAACATAACTTCGGGCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: TGGLLLGMSPSS*GLLVNITSGTC Trigger: GCAGGTGCCCGAAGTTATGTTGACCAGCAACCCTCAAGAAGAAGGTGACATCCCCAGAAGCAACCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS CAA 72 bp | CACAGGTGGGTTGCTTCTGGGGATGTCACCTTCTTCTaGAGGGTTGCTGGTCAACATAACTTCGGGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: HRWVASGDVTFF*RVAGQHNFGHL Trigger: CAGGTGCCCGAAGTTATGTTGACCAGCAACCCTCAAGAAGAAGGTGACATCCCCAGAAGCAACCCACCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | GGTGAGACAGGTAGAGCTGCTCCAACTCCTGGTCAATaGTGTCTTCACCAAGCAACTCATCCAAGCCACTCA | + |
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Preference number: 6 (lower is better) Translates to: GETGRAAPTPGQ*CLHQATHPSHS Trigger: TGAGTGGCTTGGATGAGTTGCTTGGTGAAGACACCATTGACCAGGAGTTGGAGCAGCTCTACCTGTCTCACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 ENSMUST00000150787.8 |
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| CDS CAA 90 bp | TGTAAAAGCCACAGGTGGGTTGCTTCTGGGGATGTCACCTTCTTCTaGAGGGTTGCTGGTCAACATAACTTCGGGCACCTGCTGAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: CKSHRWVASGDVTFF*RVAGQHNFGHLLKC Trigger: ACACTTCAGCAGGTGCCCGAAGTTATGTTGACCAGCAACCCTCAAGAAGAAGGTGACATCCCCAGAAGCAACCCACCTGTGGCTTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150787.8 |
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| CDS GCA 72 bp | AACCACTGGGCTATCACATCTAGAGCTAGAGCGCTCTaGCCATGGAACCCACACATCTCCCATAGTAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: NHWAITSRARAL*PWNPHISHSSY Trigger: ATAGCTACTATGGGAGATGTGTGGGTTCCATGGGCAGAGCGCTCTAGCTCTAGATGTGATAGCCCAGTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CCA 72 bp | TGGGCTATCACATCTAGAGCTAGAGCGCTCTGCCCATaGAACCCACACATCTCCCATAGTAGCTATCACAGA | + |
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Preference number: 6 (lower is better) Translates to: WAITSRARALCP*NPHISHSSYHR Trigger: TCTGTGATAGCTACTATGGGAGATGTGTGGGTTCCATGGGCAGAGCGCTCTAGCTCTAGATGTGATAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000150787.8 |
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| CDS CAA 90 bp | TGTAAAAGCCACAGGTGGGTTGCTTCTGGGGATGTCACCTTCTTCTaGAGGGTTGCTGGTCAACATAACTTCGGGCACCTGAAGTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: CKSHRWVASGDVTFF*RVAGQHNFGHLKCH Trigger: ATGACACTTCAGGTGCCCGAAGTTATGTTGACCAGCAACCCTCAAGAAGAAGGTGACATCCCCAGAAGCAACCCACCTGTGGCTTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115742.9 ENSMUST00000132788.2 |
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