Pregenerated sensors for PPP1R3E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072494Ensembl transcript IDs: ENSMUST00000168622.2, ENSMUST00000177403.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGACATTTCAGTAGGTTCCAAGTTCTCTAGCACGCAGGTGGGATaGTGCTTGCTGACCCTGCAGAGCTGGAATGCTGGCACAGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: PDISVGSKFSSTQVG*CLLTLQSWNAGTGD Trigger: GTCTCCTGTGCCAGCATTCCAGCTCTGCAGGGTCAGCAAGCAGCATCCCACCTGCGTGCTAGAGAACTTGGAACCTACTGAAATGTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR CCA 90 bp | CTGGAATGCTGGCACAGGAGACAGCAGGGGAAAGTCTGGGGCCTTTaGAGGACAGGAAGGCACAGCATAATGAGGAACAATGGTCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: LECWHRRQQGKVWGL*RTGRHSIMRNNGLS Trigger: GGAAAGACCATTGTTCCTCATTATGCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTCCTGTGCCAGCATTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGTGGAGGGAGGGAAGGAGGTGCACCCAATGGTATGGTGGGTTGGCCAGAGCCCAAGGAGGCTTCTTaGCCTTCCAGGGCCTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: GCGGREGGAPNGMVGWPEPKEAS*PSRAFY Trigger: ATAGAAGGCCCTGGAAGGTCAAGAAGCCTCCTTGGG...CTCTGGCCAACCCACCATACCATTGGGTGCACCTCCTTCCCTCCCTCCACATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR CAA 90 bp | ATTTCAGTAGGTTCCAAGTTCTCTAGCACGCAGGTGGGATGCTGCTaGCTGACCCTGCAGAGCTGGAATGCTGGCACAGGAGACAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ISVGSKFSSTQVGCC*LTLQSWNAGTGDSR Trigger: CCTGCTGTCTCCTGTGCCAGCATTCCAGCTCTGCAGGGTCAGCAAGCAGCATCCCACCTGCGTGCTAGAGAACTTGGAACCTACTGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR-3UTR GCA 90 bp | GGATGTGGAGGGAGGGAAGGAGGTGCACCCAATGGTATGGTGGGTTGGCCAGAGCCACTTACGCACACCTaGTGTTTTCCACCCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: GCGGREGGAPNGMVGWPEPLTHT*CFPPKS Trigger: AGATTTGGGTGGAAAACAGCAGGTGTGCGTAAGTGG...CTCTGGCCAACCCACCATACCATTGGGTGCACCTCCTTCCCTCCCTCCACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGGAGACAGCAGGGGAAAGTCTGGGGCCTTTGGAGGACAGGAAGGCACAGCATGGTCTTTCCCTGGTaGCTGAAGGAACTCAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: HRRQQGKVWGLWRTGRHSMVFPW*LKELKK Trigger: CTTTTTGAGTTCCTTCAGCCACCAGGGAAAGACCAT...GCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTCCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAGACAGCAGGGGAAAGTCTGGGGCCTTTGGAGGACAGGAAGGCACAGCAGACATCCTGTCATACTaGCAGAAGGCAATGGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: TGDSRGKSGAFGGQEGTADILSY*QKAMVK Trigger: TTTGACCATTGCCTTCTGGCAGTATGACAGGATGTC...TGCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCAATCCGAATGACTTCACTGGGCTGGACTTTATACATCAAGGCTCCTCAGCCACTTACGCACACCTaGTGTTTTCCACCCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: EAIRMTSLGWTLYIKAPQPLTHT*CFPPKS Trigger: AGATTTGGGTGGAAAACAGCAGGTGTGCGTAAGTGG...CTGAGGAGCCTTGATGTATAAAGTCCAGCCCAGTGAAGTCATTCGGATTGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| 3UTR-3UTR CCA 90 bp | AAAATCAGTAGGGATTTTCATGATTCACCGTCCCTTGACATAAAGTGCTTAGAGCAGGACAGAGGGACGTaGGGTGGTAAGGCCAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: KISRDFHDSPSLDIKCLEQDRGT*GGKASK Trigger: CTTACTGGCCTTACCACCCCACGTCCCTCTGTCCTG...CTCTAAGCACTTTATGTCAAGGGACGGTGAATCATGAAAATCCCTACTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168622.2 |
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| 3UTR CCA 72 bp | AGACCGCTCTCCACCCATCTGCCAATTGTGACTCCCTaGTTCCTGGCGCCACAGCCTCTCCCCCTACGCCTG | + |
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Preference number: 3 (lower is better) Translates to: RPLSTHLPIVTP*FLAPQPLPLRL Trigger: CAGGCGTAGGGGGAGAGGCTGTGGCGCCAGGAACCAGGGAGTCACAATTGGCAGATGGGTGGAGAGCGGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAAGGTTCCCAGCCCAAGGAGGCTTCTTGACCTTCCAGGGCCTTCTATCTCGTCCAGCCACCTCCGCTaGACTCTGAGACCGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: IKVPSPRRLLDLPGPSISSSHLR*TLRPLS Trigger: GGAGAGCGGTCTCAGAGTCAAGCGGAGGTGGCTGGA...CGAGATAGAAGGCCCTGGAAGGTCAAGAAGCCTCCTTGGGCTGGGAACCTTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| 3UTR TCA 72 bp | CCAAGTTCTCTAGCACGCAGGTGGGATGCTGCTTGCTaGCCCTGCAGAGCTGGAATGCTGGCACAGGAGACA | + |
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Preference number: 3 (lower is better) Translates to: PSSLARRWDAAC*PCRAGMLAQET Trigger: TGTCTCCTGTGCCAGCATTCCAGCTCTGCAGGGTCAGCAAGCAGCATCCCACCTGCGTGCTAGAGAACTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR GCA 72 bp | GTAGGTTCCAAGTTCTCTAGCACGCAGGTGGGATGCTaGTTGCTGACCCTGCAGAGCTGGAATGCTGGCACA | + |
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Preference number: 3 (lower is better) Translates to: VGSKFSSTQVGC*LLTLQSWNAGT Trigger: TGTGCCAGCATTCCAGCTCTGCAGGGTCAGCAAGCAGCATCCCACCTGCGTGCTAGAGAACTTGGAACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR GCA 72 bp | TCAGTAGGTTCCAAGTTCTCTAGCACGCAGGTGGGATaGTGCTTGCTGACCCTGCAGAGCTGGAATGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: SVGSKFSSTQVG*CLLTLQSWNAG Trigger: GCCAGCATTCCAGCTCTGCAGGGTCAGCAAGCAGCATCCCACCTGCGTGCTAGAGAACTTGGAACCTACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR CCA 72 bp | CTGGAATGCTGGCACAGGAGACAGCAGGGGAAAGTCTaGGGCCTTTGGAGGACAGGAAGGCACAGCATAATG | + |
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Preference number: 3 (lower is better) Translates to: LECWHRRQQGKV*GLWRTGRHSIM Trigger: CATTATGCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTCCTGTGCCAGCATTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| 3UTR TCA 72 bp | GAACAAACTGTCATAGCCCCCGGCAACCCCTGTCCTTaGAGACTGAAGCCACGAACTGCTGAGAGACGAGGA | + |
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Preference number: 3 (lower is better) Translates to: EQTVIAPGNPCP*RLKPRTAERRG Trigger: TCCTCGTCTCTCAGCAGTTCGTGGCTTCAGTCTTCAAGGACAGGGGTTGCCGGGGGCTATGACAGTTTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| 3UTR GCA 72 bp | CACGAACTGCTGAGAGACGAGGACATCCTGTCATACTaGCAGAAGGCAATGGTCAAATTCCTGGAGTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: HELLRDEDILSY*QKAMVKFLELS Trigger: GCTTAACTCCAGGAATTTGACCATTGCCTTCTGGCAGTATGACAGGATGTCCTCGTCTCTCAGCAGTTCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| 3UTR-3UTR CAA 90 bp | AAAATCAGTAGGGATTTTCATGATTCACCGTCCCTTGACATAAAGTGCTTAGAGTCCAGCCACCTCCGCTaGACTCTGAGACCGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: KISRDFHDSPSLDIKCLESSHLR*TLRPLS Trigger: GGAGAGCGGTCTCAGAGTCAAGCGGAGGTGGCTGGA...CTCTAAGCACTTTATGTCAAGGGACGGTGAATCATGAAAATCCCTACTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168622.2 |
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| 3UTR-3UTR CAA 90 bp | AAAATCAGTAGGGATTTTCATGATTCACCGTCCCTTGACATAAAGTGCTTAGAGGCCCAAGGAGGCTTCTaGACCTTCCAGGGCCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: KISRDFHDSPSLDIKCLEAQGGF*TFQGLL Trigger: TAGAAGGCCCTGGAAGGTCAAGAAGCCTCCTTGGGC...CTCTAAGCACTTTATGTCAAGGGACGGTGAATCATGAAAATCCCTACTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168622.2 |
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| 3UTR GCA 72 bp | GGAGTTACTTTTGCCACCGTCCTTATTCCTAGTGCTTaGCTGGTGGCTGAAGGAACTCAAAAAGAACAAACT | + |
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Preference number: 3 (lower is better) Translates to: GVTFATVLIPSA*LVAEGTQKEQT Trigger: AGTTTGTTCTTTTTGAGTTCCTTCAGCCACCAGGCAAGCACTAGGAATAAGGACGGTGGCAAAAGTAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168622.2 |
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| 3UTR CCA 72 bp | TTACTTTTGCCACCGTCCTTATTCCTAGTGCTTGCCTaGTGGCTGAAGGAACTCAAAAAGAACAAACTGTCA | + |
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Preference number: 3 (lower is better) Translates to: LLLPPSLFLVLA*WLKELKKNKLS Trigger: TGACAGTTTGTTCTTTTTGAGTTCCTTCAGCCACCAGGCAAGCACTAGGAATAAGGACGGTGGCAAAAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168622.2 |
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| CDS-3UTR GCA 90 bp | ACAGGAGACAGCAGGGGAAAGTCTGGGGCCTTTGGAGGACAGGAAGGCACAGCATCCAGGCAGATGCGCTaGGCCTGCAGCCGGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: TGDSRGKSGAFGGQEGTASRQMR*ACSRAA Trigger: CGCCGCCCGGCTGCAGGCGCAGCGCATCTGCCTGGA...TGCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | GGATGTGGAGGGAGGGAAGGAGGTGCACCCAATGGTATGGTGGGTTGGCCAGAGTCCGCCGACCGGAGGTaGGGGCAGGCGGAAGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: GCGGREGGAPNGMVGWPESADRR*GQAEGE Trigger: TTCGCCTTCCGCCTGCCCGCACCTCCGGTCGGCGGA...CTCTGGCCAACCCACCATACCATTGGGTGCACCTCCTTCCCTCCCTCCACATCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| CDS-3UTR CCA 90 bp | ACAGGAGACAGCAGGGGAAAGTCTGGGGCCTTTGGAGGACAGGAAGGCACAGCAAGTTGCACCTGCACGTaGCGGGGCACCCGGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TGDSRGKSGAFGGQEGTASCTCT*RGTRGG Trigger: ACCGCCCCGGGTGCCCCGCCACGTGCAGGTGCAACT...TGCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | GAGACAGCAGGGGAAAGTCTGGGGCCTTTGGAGGACAGGAAGGCACAGCATAATGGCTGGGCCGCTGGCTaGGGTAGTACGCCCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: ETAGESLGPLEDRKAQHNGWAAG*GSTPAR Trigger: CCGAGCGGGCGTACTACCGCAGCCAGCGGCCCAGCC...ATTATGCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | ATAAAGGTTCCCAGCCCAAGGAGGCTTCTTGACCTTCCAGGGCCTTCTATCTCGGGCTGGGCCGCTGGCTaGGGTAGTACGCCCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: IKVPSPRRLLDLPGPSISGWAAG*GSTPAR Trigger: CCGAGCGGGCGTACTACCGCAGCCAGCGGCCCAGCC...CGAGATAGAAGGCCCTGGAAGGTCAAGAAGCCTCCTTGGGCTGGGAACCTTTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | ATAAAGGTTCCCAGCCCAAGGAGGCTTCTTGACCTTCCAGGGCCTTCTATCTCGCAGAGGGCCCGCGTCTaGGCGCTCCAGGCAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: IKVPSPRRLLDLPGPSISQRARV*ALQADA Trigger: CGCATCTGCCTGGAGCGCGCAGACGCGGGCCCTCTG...CGAGATAGAAGGCCCTGGAAGGTCAAGAAGCCTCCTTGGGCTGGGAACCTTTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGAGGCTTCTTGACCTTCCAGGGCCTTCTATCTCGCATTCTTCGAGTTCCAGTTGCACCTGCACGTaGCGGGGCACCCGGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PRRLLDLPGPSISHSSSSSCTCT*RGTRGG Trigger: ACCGCCCCGGGTGCCCCGCCACGTGCAGGTGCAACT...GGAACTCGAAGAATGCGAGATAGAAGGCCCTGGAAGGTCAAGAAGCCTCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | GCAATCCGAATGACTTCACTGGGCTGGACTTTATACATCAAGGCTCCTCAGTCCTCCAGGCAGATGCGCTaGGCCTGCAGCCGGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: AIRMTSLGWTLYIKAPQSSRQMR*ACSRAA Trigger: CGCCGCCCGGCTGCAGGCGCAGCGCATCTGCCTGGA...GGACTGAGGAGCCTTGATGTATAAAGTCCAGCCCAGTGAAGTCATTCGGATTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | CTGGGCTGGACTTTATACATCAAGGCTCCTCAGTCCATAAAGGTTCCCAGCCCACAGAGGGCCCGCGTCTaGGCGCTCCAGGCAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: LGWTLYIKAPQSIKVPSPQRARV*ALQADA Trigger: CGCATCTGCCTGGAGCGCGCAGACGCGGGCCCTCTG...TGGGCTGGGAACCTTTATGGACTGAGGAGCCTTGATGTATAAAGTCCAGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | GCAATCCGAATGACTTCACTGGGCTGGACTTTATACATCAAGGCTCCTCAGTCCTCCGCCGACCGGAGGTaGGGGCAGGCGGAAGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: AIRMTSLGWTLYIKAPQSSADRR*GQAEGE Trigger: TTCGCCTTCCGCCTGCCCGCACCTCCGGTCGGCGGA...GGACTGAGGAGCCTTGATGTATAAAGTCCAGCCCAGTGAAGTCATTCGGATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGAGGCTTCTTGACCTTCCAGGGCCTTCTATCTCGCATTCTTCGAGTTCCACTCCTCCTCGAGGCTaGGCCGCTGGCTGCGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PRRLLDLPGPSISHSSSSTPPRG*AAGCGS Trigger: ACTACCGCAGCCAGCGGCCCAGCCTCGAGGAGGAGT...GGAACTCGAAGAATGCGAGATAGAAGGCCCTGGAAGGTCAAGAAGCCTCCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | CTCGCATTCTTCGAGTTCCTTCCACTTACGCACACCTGCTGTTTTCCACCCAAACTCTGCAGTTGCACCTaGACGTGGCGGGGCACCCGG | + |
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Preference number: 4 (lower is better) Translates to: LAFFEFLPLTHTCCFPPKLCSCT*TWRGTR Trigger: CCGGGTGCCCCGCCACGTGCAGGTGCAACTGCAGAG...TTTGGGTGGAAAACAGCAGGTGTGCGTAAGTGGAAGGAACTCGAAGAATGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| 3UTR CAA 72 bp | GGTTCCAAGTTCTCTAGCACGCAGGTGGGATGCTGCTaGCTGACCCTGCAGAGCTGGAATGCTGGCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: GSKFSSTQVGCC*LTLQSWNAGTG Trigger: TCCTGTGCCAGCATTCCAGCTCTGCAGGGTCAGCAAGCAGCATCCCACCTGCGTGCTAGAGAACTTGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | GAAGCAATCCGAATGACTTCACTGGGCTGGACTTTATACATCAAGGCTCCTCAGGCGTCCCTCTGCAGTTaGACCTGCACGTGGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: EAIRMTSLGWTLYIKAPQASLCS*TCTWRG Trigger: GCCCCGCCACGTGCAGGTGCAACTGCAGAGGGACGC...CTGAGGAGCCTTGATGTATAAAGTCCAGCCCAGTGAAGTCATTCGGATTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | CTGGGCTGGACTTTATACATCAAGGCTCCTCAGTCCATAAAGGTTCCCAGCCCACGAAACGCACTCTCTTaGGAGTGTCAGGGCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LGWTLYIKAPQSIKVPSPRNALS*ECQGCG Trigger: GCCGCAGCCCTGACACTCGCAAGAGAGTGCGTTTCG...TGGGCTGGGAACCTTTATGGACTGAGGAGCCTTGATGTATAAAGTCCAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | ATTCTTCGAGTTCCTTCCACTTACGCACACCTGCTGTTTTCCACCCAAATCTCTGCGTCCCTCTGCAGTTaGACCTGCACGTGGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: ILRVPSTYAHLLFSTQISASLCS*TCTWRG Trigger: GCCCCGCCACGTGCAGGTGCAACTGCAGAGGGACGC...AGAGATTTGGGTGGAAAACAGCAGGTGTGCGTAAGTGGAAGGAACTCGAAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | ACTTTATACATCAAGGCTCCTCAGTCCATAAAGGTTCCCAGCCCAAGGAGGCTTCGCAGGGCGTCCCTCTaGAGTTGCACCTGCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLYIKAPQSIKVPSPRRLRRASL*SCTCTW Trigger: CCACGTGCAGGTGCAACTGCAGAGGGACGCCCTGCG...AAGCCTCCTTGGGCTGGGAACCTTTATGGACTGAGGAGCCTTGATGTATAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| 3UTR CAA 72 bp | CTGGCACAGGAGACAGCAGGGGAAAGTCTGGGGCCTTaGGAGGACAGGAAGGCACAGCATAATGAGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: LAQETAGESLGP*EDRKAQHNEEQ Trigger: TTGTTCCTCATTATGCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTCCTGTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| CDS-3UTR CCA 90 bp | ATTCTTCGAGTTCCTTCCACTTACGCACACCTGCTGTTTTCCACCCAAATCTCTAAATGGATCCAGCCCTaGGGCTCCGCGGCTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: ILRVPSTYAHLLFSTQISKWIQP*GSAAPA Trigger: TGCCGGAGCCGCGGAGCCCCAGGGCTGGATCCATTT...AGAGATTTGGGTGGAAAACAGCAGGTGTGCGTAAGTGGAAGGAACTCGAAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | ACTTTATACATCAAGGCTCCTCAGTCCATAAAGGTTCCCAGCCCAAGGAGGCTTCGAAACGCACTCTCTTaGGAGTGTCAGGGCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TLYIKAPQSIKVPSPRRLRNALS*ECQGCG Trigger: GCCGCAGCCCTGACACTCGCAAGAGAGTGCGTTTCG...AAGCCTCCTTGGGCTGGGAACCTTTATGGACTGAGGAGCCTTGATGTATAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR GCA 90 bp | ATGGTCAAATTCCTGGAGTTAAGCAAGGCAATTTCGGCTCAGATGAAGCTAGGACGCAGGGCGTCCCTCTaGAGTTGCACCTGCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: MVKFLELSKAISAQMKLGRRASL*SCTCTW Trigger: CCACGTGCAGGTGCAACTGCAGAGGGACGCCCTGCG...TCCTAGCTTCATCTGAGCCGAAATTGCCTTGCTTAACTCCAGGAATTTGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR CCA 90 bp | ATGGTCAAATTCCTGGAGTTAAGCAAGGCAATTTCGGCTCAGATGAAGCTAGGAACTCCTCCTCGAGGCTaGGCCGCTGGCTGCGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: MVKFLELSKAISAQMKLGTPPRG*AAGCGS Trigger: ACTACCGCAGCCAGCGGCCCAGCCTCGAGGAGGAGT...TCCTAGCTTCATCTGAGCCGAAATTGCCTTGCTTAACTCCAGGAATTTGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| 3UTR CAA 72 bp | CACTATTTGGCTACAAGGGCAGGGTGGGAGTTACTTTaGCCACCGTCCTTATTCCTAGTGCTTGCCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HYLATRAGWELL*PPSLFLVLAWW Trigger: CCACCAGGCAAGCACTAGGAATAAGGACGGTGGCAAAAGTAACTCCCACCCTGCCCTTGTAGCCAAATAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168622.2 |
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| CDS GCA 90 bp | GCCACGCCCAGAGGGCCCGCGTCTGCGCGCTCCAGGCAGATGCGCTaGGCCTGCAGCCGGGCGGCGAAGCCGGGCTCCAGGGCTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ATPRGPASARSRQMR*ACSRAAKPGSRAGS Trigger: GGAGCCAGCCCTGGAGCCCGGCTTCGCCGCCCGGCTGCAGGCGCAGCGCATCTGCCTGGAGCGCGCAGACGCGGGCCCTCTGGGCGTGGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS GCA 90 bp | TCCCGGCCACGCCCAGAGGGCCCGCGTCTGCGCGCTCCAGGCAGATaGGCTGCGCCTGCAGCCGGGCGGCGAAGCCGGGCTCCAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SRPRPEGPRLRAPGR*AAPAAGRRSRAPGL Trigger: CAGCCCTGGAGCCCGGCTTCGCCGCCCGGCTGCAGGCGCAGCGCATCTGCCTGGAGCGCGCAGACGCGGGCCCTCTGGGCGTGGCCGGGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS GCA 90 bp | GGGACGGAGCTGGACCCGCGTAGGAGGCGGGCGATTCCCGCAGGCTaGGCCAGCCGTCCGCGCTCCAGCGCACGCTCACGCGCTTCTCGT | + |
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Preference number: 5 (lower is better) Translates to: GTELDPRRRRAIPAG*ASRPRSSARSRASR Trigger: ACGAGAAGCGCGTGAGCGTGCGCTGGAGCGCGGACGGCTGGCGCAGCCTGCGGGAATCGCCCGCCTCCTACGCGGGTCCAGCTCCGTCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS GCA 90 bp | CTCGAGGCTGGGCCGCTGGCTGCGGTAGTACGCCCGCTCGGTCAATaGCGCTATAAAGCTCAGGTTGCGGGGTATATCCGTGCGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LEAGPLAAVVRPLGQ*RYKAQVAGYIRARW Trigger: CCACCGCGCACGGATATACCCCGCAACCTGAGCTTTATAGCGGCATTGACCGAGCGGGCGTACTACCGCAGCCAGCGGCCCAGCCTCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR CAA 90 bp | CTCTCCACCCATCTGCCAATTGTGACTCCCTGGTTCCTGGCGCCACAGCCTCTCGGCGTCCCTCTGCAGTaGCACCTGCACGTGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: LSTHLPIVTPWFLAPQPLGVPLQ*HLHVAG Trigger: CCCCGCCACGTGCAGGTGCAACTGCAGAGGGACGCC...GAGAGGCTGTGGCGCCAGGAACCAGGGAGTCACAATTGGCAGATGGGTGGAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR CAA 90 bp | CACAGGAGACAGCAGGGGAAAGTCTGGGGCCTTTGGAGGACAGGAAGGCACAGCGGCGTCCCTCTGCAGTaGCACCTGCACGTGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: HRRQQGKVWGLWRTGRHSGVPLQ*HLHVAG Trigger: CCCCGCCACGTGCAGGTGCAACTGCAGAGGGACGCC...GCTGTGCCTTCCTGTCCTCCAAAGGCCCCAGACTTTCCCCTGCTGTCTCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177403.2 |
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| CDS-3UTR CAA 90 bp | CTCGCATTCTTCGAGTTCCTTCCACTTACGCACACCTGCTGTTTTCCACCCAAAGCGAAACGCACTCTCTaGCGAGTGTCAGGGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LAFFEFLPLTHTCCFPPKAKRTL*RVSGLR Trigger: CCGCAGCCCTGACACTCGCAAGAGAGTGCGTTTCGC...TTTGGGTGGAAAACAGCAGGTGTGCGTAAGTGGAAGGAACTCGAAGAATGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS-3UTR CAA 90 bp | ATTCTTCGAGTTCCTTCCACTTACGCACACCTGCTGTTTTCCACCCAAATCTCTGCGAAACGCACTCTCTaGCGAGTGTCAGGGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: ILRVPSTYAHLLFSTQISAKRTL*RVSGLR Trigger: CCGCAGCCCTGACACTCGCAAGAGAGTGCGTTTCGC...AGAGATTTGGGTGGAAAACAGCAGGTGTGCGTAAGTGGAAGGAACTCGAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS GCA 72 bp | GGCGGGCACGGCGCGAAGTGGCGCAGGGCGTCCCTCTaGAGTTGCACCTGCACGTGGCGGGGCACCCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: GGHGAKWRRASL*SCTCTWRGTRG Trigger: GCCCCGGGTGCCCCGCCACGTGCAGGTGCAACTGCAGAGGGACGCCCTGCGCCACTTCGCGCCGTGCCCGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS GCA 72 bp | CTGGACCCGCGTAGGAGGCGGGCGATTCCCGCAGGCTaGGCCAGCCGTCCGCGCTCCAGCGCACGCTCACGC | + |
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Preference number: 6 (lower is better) Translates to: LDPRRRRAIPAG*ASRPRSSARSR Trigger: GCGTGAGCGTGCGCTGGAGCGCGGACGGCTGGCGCAGCCTGCGGGAATCGCCCGCCTCCTACGCGGGTCCAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS GCA 72 bp | CACGGCGCGAAGTGGCGCAGGGCGTCCCTCTGCAGTTaGACCTGCACGTGGCGGGGCACCCGGGGCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HGAKWRRASLCS*TCTWRGTRGGS Trigger: GGAACCGCCCCGGGTGCCCCGCCACGTGCAGGTGCAACTGCAGAGGGACGCCCTGCGCCACTTCGCGCCGTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS GCA 72 bp | GCGAAGGGCGAAGAGCAGCGTTCCGCCGACCGGAGGTaGGGGCAGGCGGAAGGCGAAGCGGTCAGCCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: AKGEEQRSADRR*GQAEGEAVSPR Trigger: CCGCGGGCTGACCGCTTCGCCTTCCGCCTGCCCGCACCTCCGGTCGGCGGAACGCTGCTCTTCGCCCTTCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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| CDS GCA 72 bp | GGGCCGCTGGCTGCGGTAGTACGCCCGCTCGGTCAATaGCGCTATAAAGCTCAGGTTGCGGGGTATATCCGT | + |
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Preference number: 6 (lower is better) Translates to: GPLAAVVRPLGQ*RYKAQVAGYIR Trigger: ACGGATATACCCCGCAACCTGAGCTTTATAGCGGCATTGACCGAGCGGGCGTACTACCGCAGCCAGCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168622.2 ENSMUST00000177403.2 |
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