Pregenerated sensors for PPP1R3D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049999Ensembl transcript IDs: ENSMUST00000058678.5
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACTAGGAAGGAAGGCTGGGATGGGAGATGGCCGCTCAGAGAGCTaGACTGGTGGGGAAGTGTCTGCAGGTCTGCAGAGATGGAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PLGRKAGMGDGRSES*TGGEVSAGLQRWKL Trigger: GAGCTTCCATCTCTGCAGACCTGCAGACACTTCCCCACCAGTGCAGCTCTCTGAGCGGCCATCTCCCATCCCAGCCTTCCTTCCTAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 90 bp | AGGAAGGAAGGCTGGGATGGGAGATGGCCGCTCAGAGAGCTGCACTaGTGGGGAAGTGTCTGCAGGTCTGCAGAGATGGAAGCTCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: RKEGWDGRWPLRELH*WGSVCRSAEMEAPG Trigger: ACCAGGAGCTTCCATCTCTGCAGACCTGCAGACACTTCCCCACCAGTGCAGCTCTCTGAGCGGCCATCTCCCATCCCAGCCTTCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 90 bp | GCATGGTTGGAAGCTTTTCTGTCCACTCCTCCCCAGCTGTTGATGTaGGAGGCATCGCCTAACCAGGGCAGCCTCGAAGCCCAGAAATGG | + |
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Preference number: 1 (lower is better) Translates to: AWLEAFLSTPPQLLM*EASPNQGSLEAQKW Trigger: CCATTTCTGGGCTTCGAGGCTGCCCTGGTTAGGCGATGCCTCCCACATCAACAGCTGGGGAGGAGTGGACAGAAAAGCTTCCAACCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR TCA 90 bp | AAGTTGCATGGTTGGAAGCTTTTCTGTCCACTCCTCCCCAGCTGTTaGTGTGGGAGGCATCGCCTAACCAGGGCAGCCTCGAAGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: KLHGWKLFCPLLPSC*CGRHRLTRAASKPR Trigger: TCTGGGCTTCGAGGCTGCCCTGGTTAGGCGATGCCTCCCACATCAACAGCTGGGGAGGAGTGGACAGAAAAGCTTCCAACCATGCAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 90 bp | GAAAAATTAGGCCAGACCACTAGGAAGGAAGGCTGGGATGGGAGATaGCCGCTCAGAGAGCTGCACTGGTGGGGAAGTGTCTGCAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: EKLGQTTRKEGWDGR*PLRELHWWGSVCRS Trigger: AGACCTGCAGACACTTCCCCACCAGTGCAGCTCTCTGAGCGGCCATCTCCCATCCCAGCCTTCCTTCCTAGTGGTCTGGCCTAATTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 90 bp | GGGCTTCACAGTGAAAAATTAGGCCAGACCACTAGGAAGGAAGGCTaGGATGGGAGATGGCCGCTCAGAGAGCTGCACTGGTGGGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: GLHSEKLGQTTRKEG*DGRWPLRELHWWGS Trigger: ACTTCCCCACCAGTGCAGCTCTCTGAGCGGCCATCTCCCATCCCAGCCTTCCTTCCTAGTGGTCTGGCCTAATTTTTCACTGTGAAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR GCA 90 bp | TGTGAACAGGCAGTCCCTGAAGAGAAAGGGCTATCTGGGCTAAGTTaGATGGTTGGAAGCTTTTCTGTCCACTCCTCCCCAGCTGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: CEQAVPEEKGLSGLS*MVGSFSVHSSPAVD Trigger: ATCAACAGCTGGGGAGGAGTGGACAGAAAAGCTTCCAACCATGCAACTTAGCCCAGATAGCCCTTTCTCTTCAGGGACTGCCTGTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 90 bp | AATAGTTTCTACTGTTGGAAGGCTACAGACATTGGCAAGCAAACATaGTCTCAGATTTTCACCGTCCCAGGGCAGAAATGCCTCGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: NSFYCWKATDIGKQT*SQIFTVPGQKCLEG Trigger: TCCCTCGAGGCATTTCTGCCCTGGGACGGTGAAAATCTGAGACCATGTTTGCTTGCCAATGTCTGTAGCCTTCCAACAGTAGAAACTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR GCA 90 bp | GCCTCGAAGCCCAGAAATGGTTGTGTGATGACAGATGAGCTGCAAGTTCCTTCGGGCCGCTCAGAGAGCTaGACTGGTGGGGAAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ASKPRNGCVMTDELQVPSGRSES*TGGEVS Trigger: AGACACTTCCCCACCAGTGCAGCTCTCTGAGCGGCC...CGAAGGAACTTGCAGCTCATCTGTCATCACACAACCATTTCTGGGCTTCGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAAAGGCAGGGCTGGGATGGGAGATaGCCGCTCAGAGAGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: SRKVAEEPNTVLGIFKRQGWDGR*PLRELH Trigger: GTGCAGCTCTCTGAGCGGCCATCTCCCATCCCAGCC...CTGCCTTTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR TCA 90 bp | TTTACGTCAGAACTTTTCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTCCCTGCAGGGACCAGTaGGTGGTCTGGAGATTTTGG | + |
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Preference number: 2 (lower is better) Translates to: FTSELFSVQKGSRGAQHCPCRDQ*VVWRFW Trigger: CCAAAATCTCCAGACCACTCACTGGTCCCTGCAGGG...ACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGAAAAGTTCTGACGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | TTTACGTCAGAACTTTTCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTCTCAGAGAGCTGCACTaGTGGGGAAGTGTCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FTSELFSVQKGSRGAQHCLRELH*WGSVCR Trigger: CCTGCAGACACTTCCCCACCAGTGCAGCTCTCTGAG...ACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGAAAAGTTCTGACGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR GCA 90 bp | AACCAGACCAGTAGAAGACAAATGTGTGAACAGGCAGTCCCTGAAGAGAAAGGGAAGTGTCTGCAGGTCTaGAGAGATGGAAGCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NQTSRRQMCEQAVPEEKGKCLQV*RDGSSW Trigger: CCAGGAGCTTCCATCTCTGCAGACCTGCAGACACTT...CCCTTTCTCTTCAGGGACTGCCTGTTCACACATTTGTCTTCTACTGGTCTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGGCTAAGTTGCATGGTTGGAAGCTTTTCTGTCCACTCCTCCCCAGCTGTGCAAAAGGCCTTTCTTaGAAAACACTGACCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: IWAKLHGWKLFCPLLPSCAKGLS*KTLTWV Trigger: GACCCAGGTCAGTGTTTTGCAAGAAAGGCCTTTTGC...ACAGCTGGGGAGGAGTGGACAGAAAAGCTTCCAACCATGCAACTTAGCCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTTTTTCCTCCAGTACCTTGGCTAATTCTGAGAACCACCCAGGTTCATTTCCCCAGCTGTTGATGTaGGAGGCATCGCCTAACCAG | + |
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Preference number: 2 (lower is better) Translates to: SCFSSSTLANSENHPGSFPQLLM*EASPNQ Trigger: CTGGTTAGGCGATGCCTCCCACATCAACAGCTGGGG...AAATGAACCTGGGTGGTTCTCAGAATTAGCCAAGGTACTGGAGGAAAAACAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR TCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTCTCCTCCCCAGCTGTTaGTGTGGGAGGCATCGCCTA | + |
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Preference number: 2 (lower is better) Translates to: VKQLEVTGSKTQLSECTILLPSC*CGRHRL Trigger: TAGGCGATGCCTCCCACATCAACAGCTGGGGAGGAG...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGGCTAAGTTGCATGGTTGGAAGCTTTTCTGTCCACTCCTCCCCAGCTGTGAAGGCTACAGACATTaGCAAGCAAACATGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: IWAKLHGWKLFCPLLPSCEGYRH*QANMVS Trigger: TGAGACCATGTTTGCTTGCCAATGTCTGTAGCCTTC...ACAGCTGGGGAGGAGTGGACAGAAAAGCTTCCAACCATGCAACTTAGCCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTCGAAGCCCAGAAATGGTTGTGTGATGACAGATGAGCTGCAAGTTCCTTCGATTGGCAAGCAAACATaGTCTCAGATTTTCACCGTC | + |
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Preference number: 2 (lower is better) Translates to: ASKPRNGCVMTDELQVPSIGKQT*SQIFTV Trigger: GACGGTGAAAATCTGAGACCATGTTTGCTTGCCAAT...CGAAGGAACTTGCAGCTCATCTGTCATCACACAACCATTTCTGGGCTTCGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CAA 90 bp | GTTCCTTCGCTATTAATAGTTTCTACTGTTGGAAGGCTACAGACATaGGCAAGCAAACATGGTCTCAGATTTTCACCGTCCCAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VPSLLIVSTVGRLQT*ASKHGLRFSPSQGR Trigger: TCTGCCCTGGGACGGTGAAAATCTGAGACCATGTTTGCTTGCCAATGTCTGTAGCCTTCCAACAGTAGAAACTATTAATAGCGAAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR TCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTCGCAGGGCTTCACAGTaGAAAATTAGGCCAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: VKQLEVTGSKTQLSECTIRRASQ*KIRPDH Trigger: GTGGTCTGGCCTAATTTTTCACTGTGAAGCCCTGCG...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR GCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTTGGTGGGGAAGTGTCTaGAGGTCTGCAGAGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: VKQLEVTGSKTQLSECTIWWGSV*RSAEME Trigger: TTCCATCTCTGCAGACCTGCAGACACTTCCCCACCA...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR GCA 90 bp | TCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAAAGGCAGAGCACCAAAAATATTTaGAAGCCTCTTCATGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SRKVAEEPNTVLGIFKRQSTKNI*KPLHGG Trigger: GCCCCCATGAAGAGGCTTGCAAATATTTTTGGTGCT...CTGCCTTTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR GCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTGCTCCTGAACATCAGTaGTCCCCAAATTTCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VKQLEVTGSKTQLSECTIAPEHQ*SPNFWP Trigger: AGGCCAGAAATTTGGGGAGCACTGATGTTCAGGAGC...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | AAATATATATATATTTATATATGCCCTGCTAACAAGCAGACCCAGAACCAGACCGAAGGAAGGCTGGGATaGGAGATGGCCGCTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KYIYIYICPANKQTQNQTEGRLG*EMAAQR Trigger: TCTCTGAGCGGCCATCTCCCATCCCAGCCTTCCTTC...GGTCTGGTTCTGGGTCTGCTTGTTAGCAGGGCATATATAAATATATATATATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR TCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTTTGTGTGATGACAGATaGGCTGCAAGTTCCTTCGCT | + |
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Preference number: 2 (lower is better) Translates to: VKQLEVTGSKTQLSECTILCDDR*AASSFA Trigger: AGCGAAGGAACTTGCAGCTCATCTGTCATCACACAA...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | AAATATATATATATTTATATATGCCCTGCTAACAAGCAGACCCAGAACCAGACCAGAGAGCTGCACTGGTaGGGAAGTGTCTGCAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: KYIYIYICPANKQTQNQTRELHW*GSVCRS Trigger: AGACCTGCAGACACTTCCCCACCAGTGCAGCTCTCT...GGTCTGGTTCTGGGTCTGCTTGTTAGCAGGGCATATATAAATATATATATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAAAGGCAGTGCAAAACACTGACCTaGGTCCTACTGAAATTAAGG | + |
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Preference number: 2 (lower is better) Translates to: SRKVAEEPNTVLGIFKRQCKTLT*VLLKLR Trigger: CCTTAATTTCAGTAGGACCCAGGTCAGTGTTTTGCA...CTGCCTTTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAACACATAGAGGAGACATaGAAAAGGCCTTTCTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SQSRKVAEEPNTVLGIFKHIEET*KRPFLQ Trigger: TTGCAAGAAAGGCCTTTTGCATGTCTCCTCTATGTG...TTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR TCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTATCCCTGTGGCCACTTaGAAACGTAAAATACTTAAG | + |
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Preference number: 2 (lower is better) Translates to: VKQLEVTGSKTQLSECTIIPVAT*KRKILK Trigger: CTTAAGTATTTTACGTTTTCAAGTGGCCACAGGGAT...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CCA 90 bp | AAATATATATATATTTATATATGCCCTGCTAACAAGCAGACCCAGAACCAGACCGCTAAGTTGCATGGTTaGAAGCTTTTCTGTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: KYIYIYICPANKQTQNQTAKLHG*KLFCPL Trigger: GAGTGGACAGAAAAGCTTCCAACCATGCAACTTAGC...GGTCTGGTTCTGGGTCTGCTTGTTAGCAGGGCATATATAAATATATATATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 72 bp | GGCCAGACCACTAGGAAGGAAGGCTGGGATGGGAGATaGCCGCTCAGAGAGCTGCACTGGTGGGGAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: GQTTRKEGWDGR*PLRELHWWGSV Trigger: GACACTTCCCCACCAGTGCAGCTCTCTGAGCGGCCATCTCCCATCCCAGCCTTCCTTCCTAGTGGTCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR GCA 72 bp | TGGCCGCTCAGAGAGCTGCACTGGTGGGGAAGTGTCTaGAGGTCTGCAGAGATGGAAGCTCCTGGTTCACAG | + |
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Preference number: 3 (lower is better) Translates to: WPLRELHWWGSV*RSAEMEAPGSQ Trigger: CTGTGAACCAGGAGCTTCCATCTCTGCAGACCTGCAGACACTTCCCCACCAGTGCAGCTCTCTGAGCGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 72 bp | CCTGACTTGAAGAGTCTGGACGATTCTCTTGCCCTCTaGATAGGGGCCGAGGACAGAGCTGCCATGAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: PDLKSLDDSLAL*IGAEDRAAMSP Trigger: GGGGCTCATGGCAGCTCTGTCCTCGGCCCCTATCCAGAGGGCAAGAGAATCGTCCAGACTCTTCAAGTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR TCA 72 bp | CCTAATGGGTTCAAGGGTAAAATGCATCTCCGGCCATaGCGGTTTAACGAGCACCACGCTCGCCACGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: PNGFKGKMHLRP*RFNEHHARHEC Trigger: ACACTCGTGGCGAGCGTGGTGCTCGTTAAACCGTCATGGCCGGAGATGCATTTTACCCTTGAACCCATTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR GCA 72 bp | GCAGTCCCTGAAGAGAAAGGGCTATCTGGGCTAAGTTaGATGGTTGGAAGCTTTTCTGTCCACTCCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: AVPEEKGLSGLS*MVGSFSVHSSP Trigger: TGGGGAGGAGTGGACAGAAAAGCTTCCAACCATGCAACTTAGCCCAGATAGCCCTTTCTCTTCAGGGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CAA 90 bp | GCTCCTGAACATCAGTGCTCCCCAAATTTCTGGCCTGACTTGAAGAGTCTGGACTGCAAAAGGCCTTTCTaGCAAAACACTGACCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: APEHQCSPNFWPDLKSLDCKRPF*QNTDLG Trigger: ACCCAGGTCAGTGTTTTGCAAGAAAGGCCTTTTGCA...GTCCAGACTCTTCAAGTCAGGCCAGAAATTTGGGGAGCACTGATGTTCAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR GCA 72 bp | CTGTCGGAGAGACCAGAGTTCAGCACCAAAAATATTTaGAAGCCTCTTCATGGGGGCTTTAAACAGCAGGCG | + |
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Preference number: 3 (lower is better) Translates to: LSERPEFSTKNI*KPLHGGFKQQA Trigger: CGCCTGCTGTTTAAAGCCCCCATGAAGAGGCTTGCAAATATTTTTGGTGCTGAACTCTGGTCTCTCCGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 72 bp | TACTGTTGGAAGGCTACAGACATTGGCAAGCAAACATaGTCTCAGATTTTCACCGTCCCAGGGCAGAAATGC | + |
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Preference number: 3 (lower is better) Translates to: YCWKATDIGKQT*SQIFTVPGQKC Trigger: GCATTTCTGCCCTGGGACGGTGAAAATCTGAGACCATGTTTGCTTGCCAATGTCTGTAGCCTTCCAACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR CCA 72 bp | AGACATGCAAAAGGCCTTTCTTGCAAAACACTGACCTaGGTCCTACTGAAATTAAGGACCACAATCCCGTGC | + |
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Preference number: 3 (lower is better) Translates to: RHAKGLSCKTLT*VLLKLRTTIPC Trigger: GCACGGGATTGTGGTCCTTAATTTCAGTAGGACCCAGGTCAGTGTTTTGCAAGAAAGGCCTTTTGCATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR TCA 72 bp | GGGTTTGCTGACCTAATTGAACAGTTTGTTAAGCAATaGGGGAAATGCCACTGGGAGCTTCTCACTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: GFADLIEQFVKQ*GKCHWELLTPE Trigger: TTCAGGAGTGAGAAGCTCCCAGTGGCATTTCCCTCATTGCTTAACAAACTGTTCAATTAGGTCAGCAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR GCA 72 bp | TTCAAGTATCAAAACCTAATGGGTTCAAGGGTAAAATaGATCTCCGGCCATGACGGTTTAACGAGCACCACG | + |
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Preference number: 3 (lower is better) Translates to: FKYQNLMGSRVK*ISGHDGLTSTT Trigger: CGTGGTGCTCGTTAAACCGTCATGGCCGGAGATGCATTTTACCCTTGAACCCATTAGGTTTTGATACTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAAAGCAAAAGTCACATCTaGCAGGTCTTGTCCACCACA | + |
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Preference number: 3 (lower is better) Translates to: SQSRKVAEEPNTVLGIFKSKSHI*QVLSTT Trigger: TGTGGTGGACAAGACCTGCAAGATGTGACTTTTGCT...TTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CAA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTGGCAGGGTGGTTTTATaGTGGCATTTTACGTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: VKQLEVTGSKTQLSECTIGRVVL*WHFTSE Trigger: TTCTGACGTAAAATGCCACAATAAAACCACCCTGCC...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CAA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTAATTTCTGGCCTGACTaGAAGAGTCTGGACGATTCT | + |
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Preference number: 3 (lower is better) Translates to: VKQLEVTGSKTQLSECTINFWPD*KSLDDS Trigger: AGAATCGTCCAGACTCTTCAAGTCAGGCCAGAAATT...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| 3UTR-3UTR CAA 90 bp | AAATATATATATATTTATATATGCCCTGCTAACAAGCAGACCCAGAACCAGACCGGAAGGCTACAGACATaGGCAAGCAAACATGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: KYIYIYICPANKQTQNQTGRLQT*ASKHGL Trigger: GAGACCATGTTTGCTTGCCAATGTCTGTAGCCTTCC...GGTCTGGTTCTGGGTCTGCTTGTTAGCAGGGCATATATAAATATATATATATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS-3UTR TCA 90 bp | AACCAGACCAGTAGAAGACAAATGTGTGAACAGGCAGTCCCTGAAGAGAAAGGGCGCGCACTGTGCCGCTaGTGCCCAGGTCAGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NQTSRRQMCEQAVPEEKGRALCR*CPGQSR Trigger: CCTGCTCTGACCTGGGCATCAGCGGCACAGTGCGCG...CCCTTTCTCTTCAGGGACTGCCTGTTCACACATTTGTCTTCTACTGGTCTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS-3UTR GCA 90 bp | GCCTCGAAGCCCAGAAATGGTTGTGTGATGACAGATGAGCTGCAAGTTCCTTCGGGTACCTTCAGCACCTaGAGGTCCTCTCCAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: ASKPRNGCVMTDELQVPSGTFST*RSSPAR Trigger: GCGCGCTGGAGAGGACCTGCAGGTGCTGAAGGTACC...CGAAGGAACTTGCAGCTCATCTGTCATCACACAACCATTTCTGGGCTTCGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS-3UTR GCA 90 bp | TTTACGTCAGAACTTTTCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTCGAAGGCCACGTTaGGCACGCGCACTGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FTSELFSVQKGSRGAQHCSRRPR*ARALCR Trigger: GCGGCACAGTGCGCGTGCGCAACGTGGCCTTCGAGA...ACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGAAAAGTTCTGACGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGCTAAGTTGCATGGTTGGAAGCTTTTCTGTCCACTCCTCCCCAGCTGTACTCCAGATCCTGGCTaGTGCAGCACAGGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IWAKLHGWKLFCPLLPSCTPDPG*CSTGLS Trigger: ACTCAGACCTGTGCTGCAGCAGCCAGGATCTGGAGT...ACAGCTGGGGAGGAGTGGACAGAAAAGCTTCCAACCATGCAACTTAGCCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAACGCGCCACTGCCTCATaGGCACTGCGCCAGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSRKVAEEPNTVLGIFKRATAS*ALRQPE Trigger: CTCTGGCTGGCGCAGTGCGCATGAGGCAGTGGCGCG...TTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAACGCAGCCCGGGGGTCTaGAGGGTCGTCGATCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSRKVAEEPNTVLGIFKRSPGV*RVVDPC Trigger: ACATGGATCGACGACCCTGCAGACCCCCGGGCTGCG...TTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR GCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTAGGCGCGACAACACGTaGAGCGGCACGGACGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: VKQLEVTGSKTQLSECTIRRDNT*SGTDGS Trigger: CGATCCGTCCGTGCCGCTGCACGTGTTGTCGCGCCT...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR CCA 90 bp | AGCTGTTTTTCCTCCAGTACCTTGGCTAATTCTGAGAACCACCCAGGTTCATTTCTCGCACTCCCCGCGTaGCATGTGCAAGGCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: SCFSSSTLANSENHPGSFLALPA*HVQGMT Trigger: AGTCATGCCTTGCACATGCCACGCGGGGAGTGCGAG...AAATGAACCTGGGTGGTTCTCAGAATTAGCCAAGGTACTGGAGGAAAAACAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| 3UTR CAA 72 bp | CACCGTCTCAAAAGCAAAAGTCACATCTTGCAGGTCTaGTCCACCACAGTTCTAGCACCTGCTGTCGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLKSKSHILQV*STTVLAPAVGE Trigger: CTCTCCGACAGCAGGTGCTAGAACTGTGGTGGACAAGACCTGCAAGATGTGACTTTTGCTTTTGAGACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAACTGCCTCATGCGCACTaGGCCAGCCAGAGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSRKVAEEPNTVLGIFKLPHAH*ASQRRC Trigger: ACACCTTCTCTGGCTGGCGCAGTGCGCATGAGGCAG...TTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| 3UTR CAA 72 bp | CAGGACATCCACCGTCTCAAAAGCAAAAGTCACATCTaGCAGGTCTTGTCCACCACAGTTCTAGCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDIHRLKSKSHI*QVLSTTVLAPA Trigger: AGCAGGTGCTAGAACTGTGGTGGACAAGACCTGCAAGATGTGACTTTTGCTTTTGAGACGGTGGATGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| 3UTR CAA 72 bp | CCTGAACATCAGTGCTCCCCAAATTTCTGGCCTGACTaGAAGAGTCTGGACGATTCTCTTGCCCTCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PEHQCSPNFWPD*KSLDDSLALWI Trigger: TATCCAGAGGGCAAGAGAATCGTCCAGACTCTTCAAGTCAGGCCAGAAATTTGGGGAGCACTGATGTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAAAGGCAGGGACGGATCGTCGCCTaGGTTAAACACCTTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKVAEEPNTVLGIFKRQGRIVA*VKHLDL Trigger: CAGGTCAAGGTGTTTAACGCAGGCGACGATCCGTCC...CTGCCTTTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR CCA 90 bp | AGCTGTTTTTCCTCCAGTACCTTGGCTAATTCTGAGAACCACCCAGGTTCATTTCAGGAAGGGAGGCACTaGAAAGCCGAAGGCGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCFSSSTLANSENHPGSFQEGRH*KAEGED Trigger: ATCTTCGCCTTCGGCTTTCCAGTGCCTCCCTTCCTG...AAATGAACCTGGGTGGTTCTCAGAATTAGCCAAGGTACTGGAGGAAAAACAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR GCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTTCGGGAACCAGGCACTaGAGCGTGAACTCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VKQLEVTGSKTQLSECTISGTRH*SVNSRS Trigger: GGATCTGGAGTTCACGCTGCAGTGCCTGGTTCCCGA...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR CCA 90 bp | GTAAAACAACTTGAAGTGACAGGCAGTAAAACACAACTCAGCGAGTGCACAATTGTGAACTCCAGATCCTaGCTGCTGCAGCACAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKQLEVTGSKTQLSECTIVNSRS*LLQHRS Trigger: AGACCTGTGCTGCAGCAGCCAGGATCTGGAGTTCAC...AATTGTGCACTCGCTGAGTTGTGTTTTACTGCCTGTCACTTCAAGTTGTTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR CCA 90 bp | AAATATATATATATTTATATATGCCCTGCTAACAAGCAGACCCAGAACCAGACCAGTGCGAAGTGTACCTaGGAGCCGAGCTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYIYIYICPANKQTQNQTSAKCT*EPSSSR Trigger: CCTGCTGGAGCTCGGCTCCCAGGTACACTTCGCACT...GGTCTGGTTCTGGGTCTGCTTGTTAGCAGGGCATATATAAATATATATATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| 3UTR CAA 72 bp | TTCAGACACATAGAGGAGACATGCAAAAGGCCTTTCTaGCAAAACACTGACCTGGGTCCTACTGAAATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRHIEETCKRPF*QNTDLGPTEIK Trigger: CTTAATTTCAGTAGGACCCAGGTCAGTGTTTTGCAAGAAAGGCCTTTTGCATGTCTCCTCTATGTGTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| 3UTR CAA 72 bp | CTATTAATAGTTTCTACTGTTGGAAGGCTACAGACATaGGCAAGCAAACATGGTCTCAGATTTTCACCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLIVSTVGRLQT*ASKHGLRFSPS Trigger: GGACGGTGAAAATCTGAGACCATGTTTGCTTGCCAATGTCTGTAGCCTTCCAACAGTAGAAACTATTAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 90 bp | GCTCCAGGCCCAGCGCGTCAGCGAAGCGCACCCGGACCTGCCGGTTaGAGCCAGCTCCGCACGCGGCGCCCGGGGCTCCCGCAGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: APGPARQRSAPGPAG*SQLRTRRPGLPQPW Trigger: CCAAGGCTGCGGGAGCCCCGGGCGCCGCGTGCGGAGCTGGCTGCAACCGGCAGGTCCGGGTGCGCTTCGCTGACGCGCTGGGCCTGGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 90 bp | TGCGCCAGCTCCAGGCCCAGCGCGTCAGCGAAGCGCACCCGGACCTaGCGGTTGCAGCCAGCTCCGCACGCGGCGCCCGGGGCTCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CASSRPSASAKRTRT*RLQPAPHAAPGAPA Trigger: TGCGGGAGCCCCGGGCGCCGCGTGCGGAGCTGGCTGCAACCGGCAGGTCCGGGTGCGCTTCGCTGACGCGCTGGGCCTGGAGCTGGCGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CCA 90 bp | GGTTGCAGCCAGCTCCGCACGCGGCGCCCGGGGCTCCCGCAGCCTTaGCACGGCGCTCGGGGGAGGTGGGCAGCGAGCGCGAGCGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCSQLRTRRPGLPQP*HGARGRWAASASVV Trigger: AACGACGCTCGCGCTCGCTGCCCACCTCCCCCGAGCGCCGTGCCAAGGCTGCGGGAGCCCCGGGCGCCGCGTGCGGAGCTGGCTGCAACC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS TCA 90 bp | CACGGCGCTCGGGGGAGGTGGGCAGCGAGCGCGAGCGTCGTTGGATaGTGGGCCGCAGCCGAGGGTCGCAGCCCGGGGGTCTGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HGARGRWAASASVVG*WAAAEGRSPGVCRV Trigger: GACCCTGCAGACCCCCGGGCTGCGACCCTCGGCTGCGGCCCATCATCCAACGACGCTCGCGCTCGCTGCCCACCTCCCCCGAGCGCCGTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CCA 90 bp | TTGGCACGGCGCTCGGGGGAGGTGGGCAGCGAGCGCGAGCGTCGTTaGATGATGGGCCGCAGCCGAGGGTCGCAGCCCGGGGGTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LARRSGEVGSERERR*MMGRSRGSQPGGLQ Trigger: CTGCAGACCCCCGGGCTGCGACCCTCGGCTGCGGCCCATCATCCAACGACGCTCGCGCTCGCTGCCCACCTCCCCCGAGCGCCGTGCCAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 90 bp | CAGCACCTGCAGGTCCTCTCCAGCGCGCCACTGCCTCATGCGCACTaGGCCAGCCAGAGAAGGTGTAGCGCACCGTCACCTGCTTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QHLQVLSSAPLPHAH*ASQRRCSAPSPASR Trigger: TCGAGAAGCAGGTGACGGTGCGCTACACCTTCTCTGGCTGGCGCAGTGCGCATGAGGCAGTGGCGCGCTGGAGAGGACCTGCAGGTGCTG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 90 bp | GTCCTCGGTACCTTCAGCACCTGCAGGTCCTCTCCAGCGCGCCACTaGCTCATGCGCACTGCGCCAGCCAGAGAAGGTGTAGCGCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: VLGTFSTCRSSPARH*LMRTAPAREGVAHR Trigger: ACGGTGCGCTACACCTTCTCTGGCTGGCGCAGTGCGCATGAGGCAGTGGCGCGCTGGAGAGGACCTGCAGGTGCTGAAGGTACCGAGGAC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 90 bp | GCCCAGGTCAGAGCAGGTGACACGTTCCAGGCACACAAGCTGGCGTaGCAGGCGTTCTCCGAAGCCTGGGGTTTCGATGGGCGGCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AQVRAGDTFQAHKLA*QAFSEAWGFDGRRE Trigger: TTCTCGCCGCCCATCGAAACCCCAGGCTTCGGAGAACGCCTGGCACGCCAGCTTGTGTGCCTGGAACGTGTCACCTGCTCTGACCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CCA 90 bp | ACGTTCCAGGCACACAAGCTGGCGTGCCAGGCGTTCTCCGAAGCCTaGGGTTTCGATGGGCGGCGAGAAGTCGGGAACCAGGCACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TFQAHKLACQAFSEA*GFDGRREVGNQALQ Trigger: CTGCAGTGCCTGGTTCCCGACTTCTCGCCGCCCATCGAAACCCCAGGCTTCGGAGAACGCCTGGCACGCCAGCTTGTGTGCCTGGAACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CCA 90 bp | CTGATGCCCAGGTCAGAGCAGGTGACACGTTCCAGGCACACAAGCTaGCGTGCCAGGCGTTCTCCGAAGCCTGGGGTTTCGATGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LMPRSEQVTRSRHTS*RARRSPKPGVSMGG Trigger: GCCGCCCATCGAAACCCCAGGCTTCGGAGAACGCCTGGCACGCCAGCTTGTGTGCCTGGAACGTGTCACCTGCTCTGACCTGGGCATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 90 bp | CACTGGAAAGCCGAAGGCGAAGATGTCCTCGGTACCTTCAGCACCTaGAGGTCCTCTCCAGCGCGCCACTGCCTCATGCGCACTGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HWKAEGEDVLGTFST*RSSPARHCLMRTAP Trigger: TGGCGCAGTGCGCATGAGGCAGTGGCGCGCTGGAGAGGACCTGCAGGTGCTGAAGGTACCGAGGACATCTTCGCCTTCGGCTTTCCAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 90 bp | AAGCCTGGGGTTTCGATGGGCGGCGAGAAGTCGGGAACCAGGCACTaGAGCGTGAACTCCAGATCCTGGCTGCTGCAGCACAGGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KPGVSMGGEKSGTRH*SVNSRSWLLQHRSE Trigger: CTCAGACCTGTGCTGCAGCAGCCAGGATCTGGAGTTCACGCTGCAGTGCCTGGTTCCCGACTTCTCGCCGCCCATCGAAACCCCAGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS GCA 90 bp | CTGCTGCAGCACAGGTCTGAGTTGATGGCTAGGCGCGACAACACGTaGAGCGGCACGGACGGATCGTCGCCTGCGTTAAACACCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LLQHRSELMARRDNT*SGTDGSSPALNTLT Trigger: GGTCAAGGTGTTTAACGCAGGCGACGATCCGTCCGTGCCGCTGCACGTGTTGTCGCGCCTAGCCATCAACTCAGACCTGTGCTGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CCA 90 bp | GGCGAGAAGTCGGGAACCAGGCACTGCAGCGTGAACTCCAGATCCTaGCTGCTGCAGCACAGGTCTGAGTTGATGGCTAGGCGCGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GEKSGTRHCSVNSRS*LLQHRSELMARRDN Trigger: GTTGTCGCGCCTAGCCATCAACTCAGACCTGTGCTGCAGCAGCCAGGATCTGGAGTTCACGCTGCAGTGCCTGGTTCCCGACTTCTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CCA 90 bp | TGCGAAGTGTACCTGGGAGCCGAGCTCCAGCAGGAAGGGAGGCACTaGAAAGCCGAAGGCGAAGATGTCCTCGGTACCTTCAGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CEVYLGAELQQEGRH*KAEGEDVLGTFSTC Trigger: GCAGGTGCTGAAGGTACCGAGGACATCTTCGCCTTCGGCTTTCCAGTGCCTCCCTTCCTGCTGGAGCTCGGCTCCCAGGTACACTTCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGCTAAGTTGCATGGTTGGAAGCTTTTCTGTCCACTCCTCCCCAGCTGTCGAGCGCGAGCGTCGTaGGATGATGGGCCGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IWAKLHGWKLFCPLLPSCRARAS*DDGPQP Trigger: CGGCTGCGGCCCATCATCCAACGACGCTCGCGCTCG...ACAGCTGGGGAGGAGTGGACAGAAAAGCTTCCAACCATGCAACTTAGCCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 90 bp | ATCATTGTTGTCCCAGTACTCAGCACCAGCTACGCCATAGCGCAGTaGGAAGTGTACCTGGGAGCCGAGCTCCAGCAGGAAGGGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IIVVPVLSTSYAIAQ*EVYLGAELQQEGRH Trigger: GTGCCTCCCTTCCTGCTGGAGCTCGGCTCCCAGGTACACTTCGCACTGCGCTATGGCGTAGCTGGTGCTGAGTACTGGGACAACAATGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR CAA 90 bp | AACCAGACCAGTAGAAGACAAATGTGTGAACAGGCAGTCCCTGAAGAGAAAGGGCAGCACAGGTCTGAGTaGATGGCTAGGCGCGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: NQTSRRQMCEQAVPEEKGQHRSE*MARRDN Trigger: GTTGTCGCGCCTAGCCATCAACTCAGACCTGTGCTG...CCCTTTCTCTTCAGGGACTGCCTGTTCACACATTTGTCTTCTACTGGTCTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAATTCTCGAAGGCCACGTaGCGCACGCGCACTGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SQSRKVAEEPNTVLGIFKFSKAT*RTRTVP Trigger: CGGCACAGTGCGCGTGCGCAACGTGGCCTTCGAGAA...TTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTCCAGAAAGGTAGCAGAGGAGCCCAACACTGTTCTTGGAATTTTTAAATCGCGACCATCATTGTaGTCCCAGTACTCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSRKVAEEPNTVLGIFKSRPSL*SQYSAP Trigger: TGGTGCTGAGTACTGGGACAACAATGATGGTCGCGA...TTTAAAAATTCCAAGAACAGTGTTGGGCTCCTCTGCTACCTTTCTGGACTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CAA 90 bp | CGGTTGCAGCCAGCTCCGCACGCGGCGCCCGGGGCTCCCGCAGCCTaGGCACGGCGCTCGGGGGAGGTGGGCAGCGAGCGCGAGCGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RLQPAPHAAPGAPAA*ARRSGEVGSERERR Trigger: ACGACGCTCGCGCTCGCTGCCCACCTCCCCCGAGCGCCGTGCCAAGGCTGCGGGAGCCCCGGGCGCCGCGTGCGGAGCTGGCTGCAACCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 72 bp | TCCAGGCCCAGCGCGTCAGCGAAGCGCACCCGGACCTaGCGGTTGCAGCCAGCTCCGCACGCGGCGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRPSASAKRTRT*RLQPAPHAAPG Trigger: CCCGGGCGCCGCGTGCGGAGCTGGCTGCAACCGGCAGGTCCGGGTGCGCTTCGCTGACGCGCTGGGCCTGGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CAA 90 bp | AGCTCCAGGCCCAGCGCGTCAGCGAAGCGCACCCGGACCTGCCGGTaGCAGCCAGCTCCGCACGCGGCGCCCGGGGCTCCCGCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSRPSASAKRTRTCR*QPAPHAAPGAPAAL Trigger: CAAGGCTGCGGGAGCCCCGGGCGCCGCGTGCGGAGCTGGCTGCAACCGGCAGGTCCGGGTGCGCTTCGCTGACGCGCTGGGCCTGGAGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS TCA 72 bp | CGGGGGAGGTGGGCAGCGAGCGCGAGCGTCGTTGGATaGTGGGCCGCAGCCGAGGGTCGCAGCCCGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RGRWAASASVVG*WAAAEGRSPGV Trigger: GACCCCCGGGCTGCGACCCTCGGCTGCGGCCCATCATCCAACGACGCTCGCGCTCGCTGCCCACCTCCCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CCA 72 bp | CGCTCGGGGGAGGTGGGCAGCGAGCGCGAGCGTCGTTaGATGATGGGCCGCAGCCGAGGGTCGCAGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSGEVGSERERR*MMGRSRGSQPG Trigger: CCCGGGCTGCGACCCTCGGCTGCGGCCCATCATCCAACGACGCTCGCGCTCGCTGCCCACCTCCCCCGAGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CAA 72 bp | AGCGGCACGGACGGATCGTCGCCTGCGTTAAACACCTaGACCTGCGCCAGCTCCAGGCCCAGCGCGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGTDGSSPALNT*TCASSRPSASA Trigger: CGCTGACGCGCTGGGCCTGGAGCTGGCGCAGGTCAAGGTGTTTAACGCAGGCGACGATCCGTCCGTGCCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CAA 90 bp | AACACGTGCAGCGGCACGGACGGATCGTCGCCTGCGTTAAACACCTaGACCTGCGCCAGCTCCAGGCCCAGCGCGTCAGCGAAGCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: NTCSGTDGSSPALNT*TCASSRPSASAKRT Trigger: GGTGCGCTTCGCTGACGCGCTGGGCCTGGAGCTGGCGCAGGTCAAGGTGTTTAACGCAGGCGACGATCCGTCCGTGCCGCTGCACGTGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 72 bp | CAGGTCCTCTCCAGCGCGCCACTGCCTCATGCGCACTaGGCCAGCCAGAGAAGGTGTAGCGCACCGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: QVLSSAPLPHAH*ASQRRCSAPSP Trigger: AGGTGACGGTGCGCTACACCTTCTCTGGCTGGCGCAGTGCGCATGAGGCAGTGGCGCGCTGGAGAGGACCTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 72 bp | CGACAACACGTGCAGCGGCACGGACGGATCGTCGCCTaGGTTAAACACCTTGACCTGCGCCAGCTCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RQHVQRHGRIVA*VKHLDLRQLQA Trigger: GGCCTGGAGCTGGCGCAGGTCAAGGTGTTTAACGCAGGCGACGATCCGTCCGTGCCGCTGCACGTGTTGTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS GCA 72 bp | ACCTTCAGCACCTGCAGGTCCTCTCCAGCGCGCCACTaGCTCATGCGCACTGCGCCAGCCAGAGAAGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TFSTCRSSPARH*LMRTAPAREGV Trigger: TACACCTTCTCTGGCTGGCGCAGTGCGCATGAGGCAGTGGCGCGCTGGAGAGGACCTGCAGGTGCTGAAGGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
||
| CDS CAA 90 bp | TGCAGCGTGAACTCCAGATCCTGGCTGCTGCAGCACAGGTCTGAGTaGATGGCTAGGCGCGACAACACGTGCAGCGGCACGGACGGATCG | + |
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Preference number: 6 (lower is better) Translates to: CSVNSRSWLLQHRSE*MARRDNTCSGTDGS Trigger: CGATCCGTCCGTGCCGCTGCACGTGTTGTCGCGCCTAGCCATCAACTCAGACCTGTGCTGCAGCAGCCAGGATCTGGAGTTCACGCTGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS TCA 72 bp | ACTCCAGATCCTGGCTGCTGCAGCACAGGTCTGAGTTaGTGGCTAGGCGCGACAACACGTGCAGCGGCACGG | + |
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Preference number: 6 (lower is better) Translates to: TPDPGCCSTGLS*WLGATTRAAAR Trigger: CCGTGCCGCTGCACGTGTTGTCGCGCCTAGCCATCAACTCAGACCTGTGCTGCAGCAGCCAGGATCTGGAGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS GCA 72 bp | AGAGCAGGTGACACGTTCCAGGCACACAAGCTGGCGTaGCAGGCGTTCTCCGAAGCCTGGGGTTTCGATGGG | + |
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Preference number: 6 (lower is better) Translates to: RAGDTFQAHKLA*QAFSEAWGFDG Trigger: CCCATCGAAACCCCAGGCTTCGGAGAACGCCTGGCACGCCAGCTTGTGTGCCTGGAACGTGTCACCTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS CCA 72 bp | AGGTCAGAGCAGGTGACACGTTCCAGGCACACAAGCTaGCGTGCCAGGCGTTCTCCGAAGCCTGGGGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: RSEQVTRSRHTS*RARRSPKPGVS Trigger: CGAAACCCCAGGCTTCGGAGAACGCCTGGCACGCCAGCTTGTGTGCCTGGAACGTGTCACCTGCTCTGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS GCA 72 bp | CACAGGTCTGAGTTGATGGCTAGGCGCGACAACACGTaGAGCGGCACGGACGGATCGTCGCCTGCGTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: HRSELMARRDNT*SGTDGSSPALN Trigger: GTTTAACGCAGGCGACGATCCGTCCGTGCCGCTGCACGTGTTGTCGCGCCTAGCCATCAACTCAGACCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS GCA 72 bp | GTCCCAGTACTCAGCACCAGCTACGCCATAGCGCAGTaGGAAGTGTACCTGGGAGCCGAGCTCCAGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VPVLSTSYAIAQ*EVYLGAELQQE Trigger: TTCCTGCTGGAGCTCGGCTCCCAGGTACACTTCGCACTGCGCTATGGCGTAGCTGGTGCTGAGTACTGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS CAA 72 bp | AACTCCAGATCCTGGCTGCTGCAGCACAGGTCTGAGTaGATGGCTAGGCGCGACAACACGTGCAGCGGCACG | + |
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Preference number: 6 (lower is better) Translates to: NSRSWLLQHRSE*MARRDNTCSGT Trigger: CGTGCCGCTGCACGTGTTGTCGCGCCTAGCCATCAACTCAGACCTGTGCTGCAGCAGCCAGGATCTGGAGTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS CCA 72 bp | TCGGGAACCAGGCACTGCAGCGTGAACTCCAGATCCTaGCTGCTGCAGCACAGGTCTGAGTTGATGGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SGTRHCSVNSRS*LLQHRSELMAR Trigger: CCTAGCCATCAACTCAGACCTGTGCTGCAGCAGCCAGGATCTGGAGTTCACGCTGCAGTGCCTGGTTCCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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| CDS CCA 72 bp | GATGAAGTGAATCCAGCTCTCCTCGCACTCCCCGCGTaGCATGTGCAAGGCATGACTGCGACAAGTAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: DEVNPALLALPA*HVQGMTATSKA Trigger: AGCCTTACTTGTCGCAGTCATGCCTTGCACATGCCACGCGGGGAGTGCGAGGAGAGCTGGATTCACTTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058678.5 |
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