Pregenerated sensors for PPP1R3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067279Ensembl transcript IDs: ENSMUST00000087321.4
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACATGCCTGATGTCAGGCAGCATTCTGTAGCAAGAACCCAAGAGTaGTGCCTTCATCACAAAGCCGCTTATCCAATTAAGAATGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: NMPDVRQHSVARTQE*CLHHKAAYPIKNAK Trigger: CTTTGCATTCTTAATTGGATAAGCGGCTTTGTGATGAAGGCATCACTCTTGGGTTCTTGCTACAGAATGCTGCCTGACATCAGGCATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CCA 90 bp | CAAATACCATCACAGGGGAGGTATCCCAATAGTGTTTTTCCAGCATaGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCAC | + |
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Preference number: 1 (lower is better) Translates to: QIPSQGRYPNSVFPA*QITYITIHCTFPTH Trigger: GTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGAAAAACACTATTGGGATACCTCCCCTGTGATGGTATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR TCA 90 bp | GAGATAGACCGATACTTTCATGTGCAAGGTCCTGGATTCTTGCATTaGGACTCTGGTGTCAGTCCCCACTTCAAATGTCACATTGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: EIDRYFHVQGPGFLH*DSGVSPHFKCHIEK Trigger: TTTTTCAATGTGACATTTGAAGTGGGGACTGACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGTATCGGTCTATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR GCA 90 bp | AATAGTGTTTTTCCAGCATGGCAGATCACATACATTACAATCCACTaGACTTTCCCAACTCACCTCAAAGTACATGCACACCGGACAATC | + |
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Preference number: 1 (lower is better) Translates to: NSVFPAWQITYITIH*TFPTHLKVHAHRTI Trigger: GATTGTCCGGTGTGCATGTACTTTGAGGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGAAAAACACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CCA 90 bp | TACCATCCAACATCCTTTTATTTTCCTATACAAGGATGCATAGAATaGATTTCTTTCCCATCTTTGAGCTATTTCCTCAGGAGAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: YHPTSFYFPIQGCIE*ISFPSLSYFLRRSL Trigger: CAGGCTTCTCCTGAGGAAATAGCTCAAAGATGGGAAAGAAATCCATTCTATGCATCCTTGTATAGGAAAATAAAAGGATGTTGGATGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CCA 90 bp | AAGGTCCTAAACATTCATGAGTTATTAGATGAGCATTCAGGTAACTaGTTTAAACAGCTACAGTGTTGTGGTTTAATGGAGGCACTGAAA | + |
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Preference number: 1 (lower is better) Translates to: KVLNIHELLDEHSGN*FKQLQCCGLMEALK Trigger: TTTCAGTGCCTCCATTAAACCACAACACTGTAGCTGTTTAAACCAGTTACCTGAATGCTCATCTAATAACTCATGAATGTTTAGGACCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CAA 90 bp | AAGTGTGGCAGAAAGATGAGTCACCTTCAATATGAAGGACGTGAGTaGTGTACACTGATGGCCCTCCTGATGATTTCAGAAGGACACCAG | + |
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Preference number: 2 (lower is better) Translates to: KCGRKMSHLQYEGRE*CTLMALLMISEGHQ Trigger: CTGGTGTCCTTCTGAAATCATCAGGAGGGCCATCAGTGTACACAACTCACGTCCTTCATATTGAAGGTGACTCATCTTTCTGCCACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCATGGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCACCTACCGATACTTTCATGTaGAAGGTCCTGGATTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: SSMADHIHYNPLHFPNSPTDTFM*KVLDSC Trigger: GCAAGAATCCAGGACCTTGCACATGAAAGTATCGGT...AGGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGCATGGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCACCTCATGTGCAAGGTCCTaGATTCTTGCATTGAGACTC | + |
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Preference number: 2 (lower is better) Translates to: FQHGRSHTLQSTALSQLTSCARS*ILALRL Trigger: GAGTCTCAATGCAAGAATCCAGGACCTTGCACATGA...GGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR TCA 90 bp | TCACATACATTACAATCCACTGCACTTTCCCAACTCACCTCAAAGTACATGCACAGTGTGGCAGAAAGATaGGTCACCTTCAATATGAAG | + |
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Preference number: 2 (lower is better) Translates to: SHTLQSTALSQLTSKYMHSVAER*VTFNMK Trigger: CTTCATATTGAAGGTGACTCATCTTTCTGCCACACT...GTGCATGTACTTTGAGGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTGATGATTTCAGAAGGACACCAGTGAATAGACCTTCAAATAAGGTCCTATTTCTTTCCCATCTTTaGGCTATTTCCTCAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: PPDDFRRTPVNRPSNKVLFLSHL*AISSGE Trigger: TTCTCCTGAGGAAATAGCTCAAAGATGGGAAAGAAA...TAGGACCTTATTTGAAGGTCTATTCACTGGTGTCCTTCTGAAATCATCAGGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR TCA 90 bp | GTCCTAAACATTCATGAGTTATTAGATGAGCATTCAGGTAACTGGTTTAAACAGGCAAGAACCCAAGAGTaGTGCCTTCATCACAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: VLNIHELLDEHSGNWFKQARTQE*CLHHKA Trigger: GGCTTTGTGATGAAGGCATCACTCTTGGGTTCTTGC...CTGTTTAAACCAGTTACCTGAATGCTCATCTAATAACTCATGAATGTTTAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR GCA 90 bp | GTCCTAAACATTCATGAGTTATTAGATGAGCATTCAGGTAACTGGTTTAAACAGTCACTGGTGACAACATaGCTGATGTCAGGCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: VLNIHELLDEHSGNWFKQSLVTT*LMSGSI Trigger: AATGCTGCCTGACATCAGGCATGTTGTCACCAGTGA...CTGTTTAAACCAGTTACCTGAATGCTCATCTAATAACTCATGAATGTTTAGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CAA 90 bp | GAAAGTAACTACGACTTCCTAATATTGAGCAATACAGATCTAGAATaGCATGAGGATTATGATCAGACAAGGGCAGTGTGTAGATTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ESNYDFLILSNTDLE*HEDYDQTRAVCRLP Trigger: AGGCAATCTACACACTGCCCTTGTCTGATCATAATCCTCATGCAATTCTAGATCTGTATTGCTCAATATTAGGAAGTCGTAGTTACTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR TCA 72 bp | GCCCAAGCTAGCCTCCAACTTTCTGTGTGCCAAGGATaGCCTTGGATTTCTAATCCTCCTGCCTCTGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: AQASLQLSVCQG*PWISNPPASAF Trigger: GAAGGCAGAGGCAGGAGGATTAGAAATCCAAGGTCATCCTTGGCACACAGAAAGTTGGAGGCTAGCTTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CCA 72 bp | GCACGAGATAGACCGATACTTTCATGTGCAAGGTCCTaGATTCTTGCATTGAGACTCTGGTGTCAGTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: ARDRPILSCARS*ILALRLWCQSP Trigger: TGGGGACTGACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGTATCGGTCTATCTCGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CCA 72 bp | AGTTCCCAGGCTGTCCTTGATCCTTCAGAACAAAGCTaGTGGCATCACCCTCAAAAACCCCCAACAATGAAT | + |
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Preference number: 3 (lower is better) Translates to: SSQAVLDPSEQS*WHHPQKPPTMN Trigger: ATTCATTGTTGGGGGTTTTTGAGGGTGATGCCACCAGCTTTGTTCTGAAGGATCAAGGACAGCCTGGGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTTCATGTGCAAGGTCCTGGATTCTTGCATTGAGACTCTGGTGTCAGTCCCCTCCTCAAACCTTTCCTaGGTCAAAGTGAAAGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: TFMCKVLDSCIETLVSVPSSNLS*VKVKAG Trigger: ACCAGCTTTCACTTTGACCAAGGAAAGGTTTGAGGA...GGGGACTGACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR CAA 90 bp | AGACCGATACTTTCATGTGCAAGGTCCTGGATTCTTGCATTGAGACTCTGGTGTTATGAAGGACGTGAGTaGTGTACACTGATGGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RPILSCARSWILALRLWCYEGRE*CTLMAL Trigger: GAGGGCCATCAGTGTACACAACTCACGTCCTTCATA...ACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGTATCGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR TCA 72 bp | CGATACTTTCATGTGCAAGGTCCTGGATTCTTGCATTaGGACTCTGGTGTCAGTCCCCACTTCAAATGTCAC | + |
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Preference number: 3 (lower is better) Translates to: RYFHVQGPGFLH*DSGVSPHFKCH Trigger: GTGACATTTGAAGTGGGGACTGACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGTATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR TCA 72 bp | GATGTCAGGCAGCATTCTGTAGCAAGAACCCAAGAGTaGTGCCTTCATCACAAAGCCGCTTATCCAATTAAG | + |
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Preference number: 3 (lower is better) Translates to: DVRQHSVARTQE*CLHHKAAYPIK Trigger: CTTAATTGGATAAGCGGCTTTGTGATGAAGGCATCACTCTTGGGTTCTTGCTACAGAATGCTGCCTGACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR GCA 72 bp | TTTCCAGCATGGCAGATCACATACATTACAATCCACTaGACTTTCCCAACTCACCTCAAAGTACATGCACAC | + |
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Preference number: 3 (lower is better) Translates to: FPAWQITYITIH*TFPTHLKVHAH Trigger: GTGTGCATGTACTTTGAGGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CCA 72 bp | TCACAGGGGAGGTATCCCAATAGTGTTTTTCCAGCATaGCAGATCACATACATTACAATCCACTGCACTTTC | + |
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Preference number: 3 (lower is better) Translates to: SQGRYPNSVFPA*QITYITIHCTF Trigger: GAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGAAAAACACTATTGGGATACCTCCCCTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CCA 72 bp | TCTGAAACACAAGATAACTTTATGTGTTCCCACCAATaGCTTAATATCCACTTAACCATGGCTCCTCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: SETQDNFMCSHQ*LNIHLTMAPPL Trigger: CAGCGGAGGAGCCATGGTTAAGTGGATATTAAGCCATTGGTGGGAACACATAAAGTTATCTTGTGTTTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR CAA 90 bp | GTCCTAAACATTCATGAGTTATTAGATGAGCATTCAGGTAACTGGTTTAAACAGGTTCCCAGGCTGTCCTaGATCCTTCAGAACAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: VLNIHELLDEHSGNWFKQVPRLS*ILQNKA Trigger: AGCTTTGTTCTGAAGGATCAAGGACAGCCTGGGAAC...CTGTTTAAACCAGTTACCTGAATGCTCATCTAATAACTCATGAATGTTTAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTGATGATTTCAGAAGGACACCAGTGAATAGACCTTCAAATAAGGTCCTAATTTCTTTCCCATCTTaGAGCTATTTCCTCAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: PPDDFRRTPVNRPSNKVLISFPS*SYFLRR Trigger: TCTCCTGAGGAAATAGCTCAAAGATGGGAAAGAAAT...TAGGACCTTATTTGAAGGTCTATTCACTGGTGTCCTTCTGAAATCATCAGGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CCA 72 bp | AACATTCATGAGTTATTAGATGAGCATTCAGGTAACTaGTTTAAACAGCTACAGTGTTGTGGTTTAATGGAG | + |
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Preference number: 3 (lower is better) Translates to: NIHELLDEHSGN*FKQLQCCGLME Trigger: CTCCATTAAACCACAACACTGTAGCTGTTTAAACCAGTTACCTGAATGCTCATCTAATAACTCATGAATGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR GCA 72 bp | TACCATCCAACATCCTTTTATTTTCCTATACAAGGATaGATAGAATGGATTTCTTTCCCATCTTTGAGCTAT | + |
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Preference number: 3 (lower is better) Translates to: YHPTSFYFPIQG*IEWISFPSLSY Trigger: ATAGCTCAAAGATGGGAAAGAAATCCATTCTATGCATCCTTGTATAGGAAAATAAAAGGATGTTGGATGGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR GCA 90 bp | ACTTTCATGTGCAAGGTCCTGGATTCTTGCATTGAGACTCTGGTGTCAGTCCCCACTCTCCCCCAGCTCTaGCACTCTGGGAAGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: TFMCKVLDSCIETLVSVPTLPQL*HSGKRP Trigger: CGGCCTCTTCCCAGAGTGGCAGAGCTGGGGGAGAGT...GGGGACTGACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTCCTTGATCCTTCAGAACAAAGCTGGTGGCATCACCCTCAAAAACCCACACGACCCGCTTCTTaGCTTGGTTGTGTGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QAVLDPSEQSWWHHPQKPTRPAS*LGCVGS Trigger: AGAGCCCACACAACCAAGCCAAGAAGCGGGTCGTGT...GGGTTTTTGAGGGTGATGCCACCAGCTTTGTTCTGAAGGATCAAGGACAGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTCCTTGATCCTTCAGAACAAAGCTGGTGGCATCACCCTCAAAAACCCCCACGCTGGTTCTTCTaGAAGGTCGGAGAAGACATG | + |
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Preference number: 4 (lower is better) Translates to: QAVLDPSEQSWWHHPQKPPRWFF*KVGEDM Trigger: CATGTCTTCTCCGACCTTCCAGAAGAACCAGCGTGG...GGGTTTTTGAGGGTGATGCCACCAGCTTTGTTCTGAAGGATCAAGGACAGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | TCCAGCATGGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCACCTCCAGCTCTGCCACTCTaGGAAGAGGCCGCTAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SSMADHIHYNPLHFPNSPPALPL*EEAASK Trigger: CTTGCTAGCGGCCTCTTCCCAGAGTGGCAGAGCTGG...AGGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | ACTTTCATGTGCAAGGTCCTGGATTCTTGCATTGAGACTCTGGTGTCAGTCCCCCTTGGCTTGGTTGTGTaGGCTCTTCCACTCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: TFMCKVLDSCIETLVSVPLGLVV*ALPLTL Trigger: CAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAG...GGGGACTGACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | TCCAGCATGGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCACCTCTGCAGGTCCCACGCTaGTTCTTCTGGAAGGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: SSMADHIHYNPLHFPNSPLQVPR*FFWKVG Trigger: TCCGACCTTCCAGAAGAACCAGCGTGGGACCTGCAG...AGGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | TTCCAGCATGGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCACCGCCGCTAGCAAGCCTTaGACTGCCAAAGACTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: FQHGRSHTLQSTALSQLTAASKP*TAKDCG Trigger: CCCACAGTCTTTGGCAGTCCAAGGCTTGCTAGCGGC...GGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR TCA 90 bp | CGAGCCCTCGGCATATACATTTCACATTCCTCACACCCTTACCACAGCGTTCCATTCAGAGGTGGTGAATaGGCCAAGCAAATCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: RALGIYISHSSHPYHSVPFRGGE*AKQILM Trigger: CATGAGGATTTGCTTGGCTCATTCACCACCTCTGAA...TGGAACGCTGTGGTAAGGGTGTGAGGAATGTGAAATGTATATGCCGAGGGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR TCA 90 bp | GTCGCTTGTATAAAACTAGTTCCCAGGCTGTCCTTGATCCTTCAGAACAAAGCTATGGATAGCAGTGAGTaGCAGCCCCTTGGAGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: VACIKLVPRLSLILQNKAMDSSE*QPLGVR Trigger: GCGGACTCCAAGGGGCTGTCACTCACTGCTATCCAT...AGCTTTGTTCTGAAGGATCAAGGACAGCCTGGGAACTAGTTTTATACAAGCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR TCA 90 bp | ACTTTCATGTGCAAGGTCCTGGATTCTTGCATTGAGACTCTGGTGTCAGTCCCCAAGGTGATCCGGACCTaGACCTTCTTCTCAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TFMCKVLDSCIETLVSVPKVIRT*TFFSKL Trigger: GAGCTTTGAGAAGAAGGTTCAGGTCCGGATCACCTT...GGGGACTGACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR TCA 90 bp | AGACCGATACTTTCATGTGCAAGGTCCTGGATTCTTGCATTGAGACTCTGGTGTTCTCCTCAGTTGGAATaGCACGGGGCAAGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: RPILSCARSWILALRLWCSPQLE*HGASRW Trigger: CCATCGACTTGCCCCGTGTCATTCCAACTGAGGAGA...ACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGTATCGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | TTCCAGCATGGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCACCACCCGCTTCTTGGCTTaGTTGTGTGGGCTCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FQHGRSHTLQSTALSQLTTRFLA*LCGLFH Trigger: GTGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGT...GGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | CTGAGCTACATCTCTAGCCCTCAAGATCTTGATTCTTCAGTTCATCTTCTCCCCGGAATGCACAGTCTTTaGGTGCCACCTGAGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSYISSPQDLDSSVHLLPGMHSL*VPPESA Trigger: TGCAGACTCAGGTGGCACCCAAAGACTGTGCATTCC...GGGGAGAAGATGAACTGAAGAATCAAGATCTTGAGGGCTAGAGATGTAGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR GCA 90 bp | AAAGCCAGATGTGCTTCAACACTCTCTAAAACATGGTTCCTGGTAGACCATGTTTGCACAGTCTTTGGGTaGCACCTGAGTCTGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: KARCASTLSKTWFLVDHVCTVFG*HLSLHS Trigger: GGAGTGCAGACTCAGGTGGCACCCAAAGACTGTGCA...AACATGGTCTACCAGGAACCATGTTTTAGAGAGTGTTGAAGCACATCTGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR TCA 90 bp | TTTATGTGTTCCCACCAATGGCTTAATATCCACTTAACCATGGCTCCTCCGCTGCAGACAAAGTTCTTCTaGAAGCGGTCCCGGAAACTT | + |
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Preference number: 4 (lower is better) Translates to: FMCSHQWLNIHLTMAPPLQTKFF*KRSRKL Trigger: AAGTTTCCGGGACCGCTTTCAGAAGAACTTTGTCTG...CAGCGGAGGAGCCATGGTTAAGTGGATATTAAGCCATTGGTGGGAACACATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR GCA 90 bp | TCCAGCATGGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCACCTTGCGATTTGGCTTCCTaGTTGACACTGAGACATGGT | + |
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Preference number: 4 (lower is better) Translates to: SSMADHIHYNPLHFPNSPCDLAS*LTLRHG Trigger: ACCATGTCTCAGTGTCAAGCAGGAAGCCAAATCGCA...AGGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CAA 72 bp | GCGTTCCATCACCATCAACAGTCCTCAAACCTTTCCTaGGTCAAAGTGAAAGCTGGTGAACTGAGAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: AFHHHQQSSNLS*VKVKAGELRGK Trigger: TTTCCCTCTCAGTTCACCAGCTTTCACTTTGACCAAGGAAAGGTTTGAGGACTGTTGATGGTGATGGAACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CAA 72 bp | CCGATACTTTCATGTGCAAGGTCCTGGATTCTTGCATaGAGACTCTGGTGTCAGTCCCCACTTCAAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: PILSCARSWILA*RLWCQSPLQMS Trigger: TGACATTTGAAGTGGGGACTGACACCAGAGTCTCAATGCAAGAATCCAGGACCTTGCACATGAAAGTATCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR GCA 90 bp | CCTCCTGATGATTTCAGAAGGACACCAGTGAATAGACCTTCAAATAAGGTCCTACTCTTCCACTCACTCTaGGATTTGGCTTCCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: PPDDFRRTPVNRPSNKVLLFHSL*DLASCL Trigger: CAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAG...TAGGACCTTATTTGAAGGTCTATTCACTGGTGTCCTTCTGAAATCATCAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CCA 90 bp | AAAGCCAGATGTGCTTCAACACTCTCTAAAACATGGTTCCTGGTAGACCATGTTAGGTCGGAGAAGACATaGATAGCAGTGAGTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: KARCASTLSKTWFLVDHVRSEKT*IAVSDS Trigger: GCTGTCACTCACTGCTATCCATGTCTTCTCCGACCT...AACATGGTCTACCAGGAACCATGTTTTAGAGAGTGTTGAAGCACATCTGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR TCA 90 bp | CTAATATTGAGCAATACAGATCTAGAATTGCATGAGGATTATGATCAGACAAGGCCATGTCCACGGGCATaGCGGAACTTGTCAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LILSNTDLELHEDYDQTRPCPRA*RNLSKD Trigger: GTCCTTTGACAAGTTCCGTCATGCCCGTGGACATGG...CCTTGTCTGATCATAATCCTCATGCAATTCTAGATCTGTATTGCTCAATATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CAA 72 bp | ATACAAGGATGCATAGAATGGATTTCTTTCCCATCTTaGAGCTATTTCCTCAGGAGAAGCCTGCAGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQGCIEWISFPS*SYFLRRSLQNP Trigger: TGGGTTCTGCAGGCTTCTCCTGAGGAAATAGCTCAAAGATGGGAAAGAAATCCATTCTATGCATCCTTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| 3UTR CAA 72 bp | AGAAAGATGAGTCACCTTCAATATGAAGGACGTGAGTaGTGTACACTGATGGCCCTCCTGATGATTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKMSHLQYEGRE*CTLMALLMISE Trigger: TTCTGAAATCATCAGGAGGGCCATCAGTGTACACAACTCACGTCCTTCATATTGAAGGTGACTCATCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR TCA 90 bp | GTCCTAAACATTCATGAGTTATTAGATGAGCATTCAGGTAACTGGTTTAAACAGGAAGGTGTCGCTGTCTaGGCTGCTGTAAACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNIHELLDEHSGNWFKQEGVAV*AAVNIL Trigger: AAGAATGTTTACAGCAGCTCAGACAGCGACACCTTC...CTGTTTAAACCAGTTACCTGAATGCTCATCTAATAACTCATGAATGTTTAGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CCA 90 bp | TCTCCCCCAGCTCTGCCACTCTGGGAAGAGGCCGCTAGCAAGCCTTaGACTGCCAAAGACTGTGGGCTCTATCTCAGTCTTAGGGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPALPLWEEAASKP*TAKDCGLYLSLRGP Trigger: GGGCCCCCTAAGACTGAGATAGAGCCCACAGTCTTTGGCAGTCCAAGGCTTGCTAGCGGCCTCTTCCCAGAGTGGCAGAGCTGGGGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 90 bp | CGCTGGTTCTTCTGGAAGGTCGGAGAAGACATGGATAGCAGTGAGTaGCAGCCCCTTGGAGTCCGCAAACACGACCCGCTTCTTGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWFFWKVGEDMDSSE*QPLGVRKHDPLLGL Trigger: CAAGCCAAGAAGCGGGTCGTGTTTGCGGACTCCAAGGGGCTGTCACTCACTGCTATCCATGTCTTCTCCGACCTTCCAGAAGAACCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CCA 90 bp | CCCCTTGGAGTCCGCAAACACGACCCGCTTCTTGGCTTGGTTGTGTaGGCTCTTCCACTCACTCTGCGATTTGGCTTCCTGCTTGACACT | + |
|
Preference number: 5 (lower is better) Translates to: PLGVRKHDPLLGLVV*ALPLTLRFGFLLDT Trigger: AGTGTCAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGTCGTGTTTGCGGACTCCAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CCA 90 bp | AACTGCAGGTCCCACGCTGGTTCTTCTGGAAGGTCGGAGAAGACATaGATAGCAGTGAGTGACAGCCCCTTGGAGTCCGCAAACACGACC | + |
|
Preference number: 5 (lower is better) Translates to: NCRSHAGSSGRSEKT*IAVSDSPLESANTT Trigger: GGTCGTGTTTGCGGACTCCAAGGGGCTGTCACTCACTGCTATCCATGTCTTCTCCGACCTTCCAGAAGAACCAGCGTGGGACCTGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 90 bp | GTCTTAGGGGGCCCCTGTTGGAATGCACAGTCTTTGGGTGCCACCTaGGTCTGCACTCCGTCAGGTTTCCATTGCACATGGACAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLGGPCWNAQSLGAT*VCTPSGFHCTWTIL Trigger: CAGAATTGTCCATGTGCAATGGAAACCTGACGGAGTGCAGACTCAGGTGGCACCCAAAGACTGTGCATTCCAACAGGGGCCCCCTAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 90 bp | TATCTCAGTCTTAGGGGGCCCCTGTTGGAATGCACAGTCTTTGGGTaGCACCTGAGTCTGCACTCCGTCAGGTTTCCATTGCACATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YLSLRGPLLECTVFG*HLSLHSVRFPLHMD Trigger: GTCCATGTGCAATGGAAACCTGACGGAGTGCAGACTCAGGTGGCACCCAAAGACTGTGCATTCCAACAGGGGCCCCCTAAGACTGAGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CAA 90 bp | CAGGCTGTCCTTGATCCTTCAGAACAAAGCTGGTGGCATCACCCTCAAAAACCCGGTCACCGTCCGATCTaGCAAAGAGCAGTTCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAVLDPSEQSWWHHPQKPGHRPI*QRAVLE Trigger: CTCGAGAACTGCTCTTTGCAAGATCGGACGGTGACC...GGGTTTTTGAGGGTGATGCCACCAGCTTTGTTCTGAAGGATCAAGGACAGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 90 bp | ACGACCCGCTTCTTGGCTTGGTTGTGTGGGCTCTTCCACTCACTCTaGGATTTGGCTTCCTGCTTGACACTGAGACATGGTTTCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TTRFLAWLCGLFHSL*DLASCLTLRHGFKG Trigger: ACCTTTGAAACCATGTCTCAGTGTCAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 90 bp | GTGGTGAATGAGCCAAGCAAATCCTCATGGCCATGTCCACGGGCATaGCGGAACTTGTCAAAGGACGTGGATCTAGCACATGGATCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VVNEPSKSSWPCPRA*RNLSKDVDLAHGSF Trigger: GAATGATCCATGTGCTAGATCCACGTCCTTTGACAAGTTCCGTCATGCCCGTGGACATGGCCATGAGGATTTGCTTGGCTCATTCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 90 bp | CACGGGGCAAGTCGATGGCAAAGGAGAAGGTGTCGCTGTCTGAGCTaGTGTAAACATTCTTCATGTAGACACAGTCCACATCTGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGASRWQRRRCRCLS*CKHSSCRHSPHLCR Trigger: CCTACACAGATGTGGACTGTGTCTACATGAAGAATGTTTACAGCAGCTCAGACAGCGACACCTTCTCCTTTGCCATCGACTTGCCCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CAA 90 bp | TTTATGTGTTCCCACCAATGGCTTAATATCCACTTAACCATGGCTCCTCCGCTGGACCCGCTTCTTGGCTaGGTTGTGTGGGCTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FMCSHQWLNIHLTMAPPLDPLLG*VVWALP Trigger: TGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGTC...CAGCGGAGGAGCCATGGTTAAGTGGATATTAAGCCATTGGTGGGAACACATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CAA 90 bp | TCCAGCATGGCAGATCACATACATTACAATCCACTGCACTTTCCCAACTCACCTAACACGACCCGCTTCTaGGCTTGGTTGTGTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SSMADHIHYNPLHFPNSPNTTRF*AWLCGL Trigger: GAGCCCACACAACCAAGCCAAGAAGCGGGTCGTGTT...AGGTGAGTTGGGAAAGTGCAGTGGATTGTAATGTATGTGATCTGCCATGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 90 bp | TCGTTGAAAACCATTGTAAGGACCCAGGAAACTCTTCAGAGGTGGTaGATGAGCCAAGCAAATCCTCATGGCCATGTCCACGGGCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLKTIVRTQETLQRW*MSQANPHGHVHGHD Trigger: GTCATGCCCGTGGACATGGCCATGAGGATTTGCTTGGCTCATTCACCACCTCTGAAGAGTTTCCTGGGTCCTTACAATGGTTTTCAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 90 bp | AATGACACGGGGCAAGTCGATGGCAAAGGAGAAGGTGTCGCTGTCTaGGCTGCTGTAAACATTCTTCATGTAGACACAGTCCACATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NDTGQVDGKGEGVAV*AAVNILHVDTVHIC Trigger: ACAGATGTGGACTGTGTCTACATGAAGAATGTTTACAGCAGCTCAGACAGCGACACCTTCTCCTTTGCCATCGACTTGCCCCGTGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 90 bp | AGTTTTAAGCTGGAGGAGATATCGTTAAGGTCCAAGAGATCAAACTaGAGGTCCCACGCTGGTTCTTCTGGAAGGTCGGAGAAGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: SFKLEEISLRSKRSN*RSHAGSSGRSEKTW Trigger: CCATGTCTTCTCCGACCTTCCAGAAGAACCAGCGTGGGACCTGCAGTTTGATCTCTTGGACCTTAACGATATCTCCTCCAGCTTAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 90 bp | GCTTGGTTGTGTGGGCTCTTCCACTCACTCTGCGATTTGGCTTCCTaGTTGACACTGAGACATGGTTTCAAAGGTTTCAATTTATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: AWLCGLFHSLCDLAS*LTLRHGFKGFNLFT Trigger: TGTGAATAAATTGAAACCTTTGAAACCATGTCTCAGTGTCAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CAA 90 bp | ATAGAATGGATTTCTTTCCCATCTTTGAGCTATTTCCTCAGGAGAAGCCTGCAGGATTTGGCTTCCTGCTaGACACTGAGACATGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IEWISFPSLSYFLRRSLQDLASC*TLRHGF Trigger: GAAACCATGTCTCAGTGTCAAGCAGGAAGCCAAATC...CTGCAGGCTTCTCCTGAGGAAATAGCTCAAAGATGGGAAAGAAATCCATTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CAA 90 bp | CAGTACCATCCAACATCCTTTTATTTTCCTATACAAGGATGCATAGAATGGATTCGCTTCTTGGCTTGGTaGTGTGGGCTCTTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: QYHPTSFYFPIQGCIEWIRFLAW*CGLFHS Trigger: TGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCG...AATCCATTCTATGCATCCTTGTATAGGAAAATAAAAGGATGTTGGATGGTACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CAA 90 bp | AAAGCCAGATGTGCTTCAACACTCTCTAAAACATGGTTCCTGGTAGACCATGTTAACTTAAGTAGTCGGTaGAGGGCTGGGGAAAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: KARCASTLSKTWFLVDHVNLSSR*RAGENQ Trigger: TTGATTTTCCCCAGCCCTCAACCGACTACTTAAGTT...AACATGGTCTACCAGGAACCATGTTTTAGAGAGTGTTGAAGCACATCTGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS-3UTR CAA 90 bp | CATCACCCTCAAAAACCCCCAACAATGAATTCTCAAGTAGCTATAGCTTCTATATCCGTCAGGTTTCCATaGCACATGGACAATTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HHPQKPPTMNSQVAIASISVRFP*HMDNSV Trigger: TACAGAATTGTCCATGTGCAATGGAAACCTGACGGA...TATAGAAGCTATAGCTACTTGAGAATTCATTGTTGGGGGTTTTTGAGGGTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CCA 72 bp | ACAGCCCCTTGGAGTCCGCAAACACGACCCGCTTCTTaGCTTGGTTGTGTGGGCTCTTCCACTCACTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TAPWSPQTRPAS*LGCVGSSTHSA Trigger: CGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGTCGTGTTTGCGGACTCCAAGGGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 72 bp | GGGCTCTATCTCAGTCTTAGGGGGCCCCTGTTGGAATaGACAGTCTTTGGGTGCCACCTGAGTCTGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: GLYLSLRGPLLE*TVFGCHLSLHS Trigger: GGAGTGCAGACTCAGGTGGCACCCAAAGACTGTGCATTCCAACAGGGGCCCCCTAAGACTGAGATAGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 90 bp | TCTGGAAGGTCGGAGAAGACATGGATAGCAGTGAGTGACAGCCCCTaGGAGTCCGCAAACACGACCCGCTTCTTGGCTTGGTTGTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGRSEKTWIAVSDSP*ESANTTRFLAWLCG Trigger: CCCACACAACCAAGCCAAGAAGCGGGTCGTGTTTGCGGACTCCAAGGGGCTGTCACTCACTGCTATCCATGTCTTCTCCGACCTTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 90 bp | ACTGCCAAAGACTGTGGGCTCTATCTCAGTCTTAGGGGGCCCCTGTaGGAATGCACAGTCTTTGGGTGCCACCTGAGTCTGCACTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: TAKDCGLYLSLRGPL*ECTVFGCHLSLHSV Trigger: GACGGAGTGCAGACTCAGGTGGCACCCAAAGACTGTGCATTCCAACAGGGGCCCCCTAAGACTGAGATAGAGCCCACAGTCTTTGGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 72 bp | GGCCCCTGTTGGAATGCACAGTCTTTGGGTGCCACCTaGGTCTGCACTCCGTCAGGTTTCCATTGCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: GPCWNAQSLGAT*VCTPSGFHCTW Trigger: CCATGTGCAATGGAAACCTGACGGAGTGCAGACTCAGGTGGCACCCAAAGACTGTGCATTCCAACAGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 72 bp | CTTAGGGGGCCCCTGTTGGAATGCACAGTCTTTGGGTaGCACCTGAGTCTGCACTCCGTCAGGTTTCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LRGPLLECTVFG*HLSLHSVRFPL Trigger: CAATGGAAACCTGACGGAGTGCAGACTCAGGTGGCACCCAAAGACTGTGCATTCCAACAGGGGCCCCCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CCA 72 bp | GTCCGCAAACACGACCCGCTTCTTGGCTTGGTTGTGTaGGCTCTTCCACTCACTCTGCGATTTGGCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRKHDPLLGLVV*ALPLTLRFGFL Trigger: CAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGTCGTGTTTGCGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CCA 72 bp | CCCTTGGAGTCCGCAAACACGACCCGCTTCTTGGCTTaGTTGTGTGGGCTCTTCCACTCACTCTGCGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLESANTTRFLA*LCGLFHSLCDL Trigger: CAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGTCGTGTTTGCGGACTCCAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CCA 72 bp | TCCCACGCTGGTTCTTCTGGAAGGTCGGAGAAGACATaGATAGCAGTGAGTGACAGCCCCTTGGAGTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SHAGSSGRSEKT*IAVSDSPLESA Trigger: TGCGGACTCCAAGGGGCTGTCACTCACTGCTATCCATGTCTTCTCCGACCTTCCAGAAGAACCAGCGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 72 bp | CCCCTTGGAGTCCGCAAACACGACCCGCTTCTTGGCTaGGTTGTGTGGGCTCTTCCACTCACTCTGCGATTT | + |
|
Preference number: 6 (lower is better) Translates to: PLGVRKHDPLLG*VVWALPLTLRF Trigger: AAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGTCGTGTTTGCGGACTCCAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 72 bp | TCGGAGAAGACATGGATAGCAGTGAGTGACAGCCCCTaGGAGTCCGCAAACACGACCCGCTTCTTGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SEKTWIAVSDSP*ESANTTRFLAW Trigger: CCAAGCCAAGAAGCGGGTCGTGTTTGCGGACTCCAAGGGGCTGTCACTCACTGCTATCCATGTCTTCTCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 72 bp | GACTGTGGGCTCTATCTCAGTCTTAGGGGGCCCCTGTaGGAATGCACAGTCTTTGGGTGCCACCTGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DCGLYLSLRGPL*ECTVFGCHLSL Trigger: CAGACTCAGGTGGCACCCAAAGACTGTGCATTCCAACAGGGGCCCCCTAAGACTGAGATAGAGCCCACAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 72 bp | TTCTGGAAGGTCGGAGAAGACATGGATAGCAGTGAGTaGCAGCCCCTTGGAGTCCGCAAACACGACCCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FWKVGEDMDSSE*QPLGVRKHDPL Trigger: AAGCGGGTCGTGTTTGCGGACTCCAAGGGGCTGTCACTCACTGCTATCCATGTCTTCTCCGACCTTCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 72 bp | TTGGAGTCCGCAAACACGACCCGCTTCTTGGCTTGGTaGTGTGGGCTCTTCCACTCACTCTGCGATTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LESANTTRFLAW*CGLFHSLCDLA Trigger: AGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCGGGTCGTGTTTGCGGACTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 72 bp | GAGCCAAGCAAATCCTCATGGCCATGTCCACGGGCATaGCGGAACTTGTCAAAGGACGTGGATCTAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: EPSKSSWPCPRA*RNLSKDVDLAH Trigger: ATGTGCTAGATCCACGTCCTTTGACAAGTTCCGTCATGCCCGTGGACATGGCCATGAGGATTTGCTTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 72 bp | TTCTTGGCTTGGTTGTGTGGGCTCTTCCACTCACTCTaGGATTTGGCTTCCTGCTTGACACTGAGACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: FLAWLCGLFHSL*DLASCLTLRHG Trigger: ACCATGTCTCAGTGTCAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CCA 72 bp | GTTAAGGTCCAAGAGATCAAACTGCAGGTCCCACGCTaGTTCTTCTGGAAGGTCGGAGAAGACATGGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: VKVQEIKLQVPR*FFWKVGEDMDS Trigger: GCTATCCATGTCTTCTCCGACCTTCCAGAAGAACCAGCGTGGGACCTGCAGTTTGATCTCTTGGACCTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 72 bp | ACCATTGTAAGGACCCAGGAAACTCTTCAGAGGTGGTaGATGAGCCAAGCAAATCCTCATGGCCATGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TIVRTQETLQRW*MSQANPHGHVH Trigger: GTGGACATGGCCATGAGGATTTGCTTGGCTCATTCACCACCTCTGAAGAGTTTCCTGGGTCCTTACAATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 72 bp | GGGCAAGTCGATGGCAAAGGAGAAGGTGTCGCTGTCTaGGCTGCTGTAAACATTCTTCATGTAGACACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GQVDGKGEGVAV*AAVNILHVDTV Trigger: GACTGTGTCTACATGAAGAATGTTTACAGCAGCTCAGACAGCGACACCTTCTCCTTTGCCATCGACTTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS GCA 72 bp | TTCTTCACTTTCACTGTCCCGGTCACCGTCCGATCTTaGAAAGAGCAGTTCTCGAGGCAGACAAAGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FFTFTVPVTVRS*KEQFSRQTKFF Trigger: GAAGAACTTTGTCTGCCTCGAGAACTGCTCTTTGCAAGATCGGACGGTGACCGGGACAGTGAAAGTGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 72 bp | GCTTGGTTGTGTGGGCTCTTCCACTCACTCTGCGATTaGGCTTCCTGCTTGACACTGAGACATGGTTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AWLCGLFHSLCD*ASCLTLRHGFK Trigger: TTTGAAACCATGTCTCAGTGTCAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 90 bp | CGCTTCTTGGCTTGGTTGTGTGGGCTCTTCCACTCACTCTGCGATTaGGCTTCCTGCTTGACACTGAGACATGGTTTCAAAGGTTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RFLAWLCGLFHSLCD*ASCLTLRHGFKGFN Trigger: ATTGAAACCTTTGAAACCATGTCTCAGTGTCAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCAAGCCAAGAAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 90 bp | AAAGCTCACATTCTTCACTTTCACTGTCCCGGTCACCGTCCGATCTaGCAAAGAGCAGTTCTCGAGGCAGACAAAGTTCTTCTGAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: KAHILHFHCPGHRPI*QRAVLEADKVLLKA Trigger: CGCTTTCAGAAGAACTTTGTCTGCCTCGAGAACTGCTCTTTGCAAGATCGGACGGTGACCGGGACAGTGAAAGTGAAGAATGTGAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 90 bp | ACAGTCTTTGGGTGCCACCTGAGTCTGCACTCCGTCAGGTTTCCATaGCACATGGACAATTCTGTAATTCTGACCCTCATTGTTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVFGCHLSLHSVRFP*HMDNSVILTLIVVP Trigger: TGGGACAACAATGAGGGTCAGAATTACAGAATTGTCCATGTGCAATGGAAACCTGACGGAGTGCAGACTCAGGTGGCACCCAAAGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 72 bp | ATTCTTCACTTTCACTGTCCCGGTCACCGTCCGATCTaGCAAAGAGCAGTTCTCGAGGCAGACAAAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILHFHCPGHRPI*QRAVLEADKVL Trigger: AAGAACTTTGTCTGCCTCGAGAACTGCTCTTTGCAAGATCGGACGGTGACCGGGACAGTGAAAGTGAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS TCA 72 bp | AAGAAATGCAGAACTCAATTTTCTCCTCAGTTGGAATaGCACGGGGCAAGTCGATGGCAAAGGAGAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: KKCRTQFSPQLE*HGASRWQRRRC Trigger: ACACCTTCTCCTTTGCCATCGACTTGCCCCGTGTCATTCCAACTGAGGAGAAAATTGAGTTCTGCATTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 72 bp | GGGCTCTTCCACTCACTCTGCGATTTGGCTTCCTGCTaGACACTGAGACATGGTTTCAAAGGTTTCAATTTA | + |
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Preference number: 6 (lower is better) Translates to: GLFHSLCDLASC*TLRHGFKGFNL Trigger: TAAATTGAAACCTTTGAAACCATGTCTCAGTGTCAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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| CDS CAA 90 bp | TGGTTGTGTGGGCTCTTCCACTCACTCTGCGATTTGGCTTCCTGCTaGACACTGAGACATGGTTTCAAAGGTTTCAATTTATTCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: WLCGLFHSLCDLASC*TLRHGFKGFNLFTK Trigger: TTTTGTGAATAAATTGAAACCTTTGAAACCATGTCTCAGTGTCAAGCAGGAAGCCAAATCGCAGAGTGAGTGGAAGAGCCCACACAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087321.4 |
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