Pregenerated sensors for PPP1R35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029725Ensembl transcript IDs: ENSMUST00000031739.6, ENSMUST00000126126.8, ENSMUST00000198929.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGCTCTGCAGGGCCGGTGCCTCCAGCTCATGATCGTCGCCCGGTaGACCGGCCACCAGCAGCGGCTCGGACCGCACCGGGGAGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: AALQGRCLQLMIVAR*TGHQQRLGPHRGGR Trigger: CCGCCCTCCCCGGTGCGGTCCGAGCCGCTGCTGGTGGCCGGTGCACCGGGCGACGATCATGAGCTGGAGGCACCGGCCCTGCAGAGCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS TCA 90 bp | AGACTCAAAGCCAGGCTGCTCTGCAGGGCCGGTGCCTCCAGCTCATaGTCGTCGCCCGGTGCACCGGCCACCAGCAGCGGCTCGGACCGC | + |
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Preference number: 5 (lower is better) Translates to: RLKARLLCRAGASSS*SSPGAPATSSGSDR Trigger: GCGGTCCGAGCCGCTGCTGGTGGCCGGTGCACCGGGCGACGATCATGAGCTGGAGGCACCGGCCCTGCAGAGCAGCCTGGCTTTGAGTCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS TCA 90 bp | GCCACCAGCAGCGGCTCGGACCGCACCGGGGAGGGCGGCGCCAGTTaGAAACGAACCGGAGTAAGACACGCCCGCCGCGCCACTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: ATSSGSDRTGEGGAS*KRTGVRHARRATPL Trigger: CAATGGAGTGGCGCGGCGGGCGTGTCTTACTCCGGTTCGTTTTCAACTGGCGCCGCCCTCCCCGGTGCGGTCCGAGCCGCTGCTGGTGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126126.8 |
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| CDS GCA 90 bp | TTGGAGGCATCAAACTGGCCGCTGGCGACAGCGGCGCGCGCGTTCTaGAGCTCCAGACTCAAAGCCAGGCTGCTCTGCAGGGCCGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LEASNWPLATAARAF*SSRLKARLLCRAGA Trigger: GGCACCGGCCCTGCAGAGCAGCCTGGCTTTGAGTCTGGAGCTGCAGAACGCGCGCGCCGCTGTCGCCAGCGGCCAGTTTGATGCCTCCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS GCA 90 bp | GTTCTGCAGCTCCAGACTCAAAGCCAGGCTGCTCTGCAGGGCCGGTaGCTCCAGCTCATGATCGTCGCCCGGTGCACCGGCCACCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: VLQLQTQSQAALQGR*LQLMIVARCTGHQQ Trigger: CTGCTGGTGGCCGGTGCACCGGGCGACGATCATGAGCTGGAGGCACCGGCCCTGCAGAGCAGCCTGGCTTTGAGTCTGGAGCTGCAGAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS CCA 90 bp | CACAGCGGGTCCGGAACGACTTTCTCAGCTGCTCCTCTACCGCCTTaGAGGCATCAAACTGGCCGCTGGCGACAGCGGCGCGCGCGTTCT | + |
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Preference number: 5 (lower is better) Translates to: HSGSGTTFSAAPLPP*RHQTGRWRQRRARS Trigger: AGAACGCGCGCGCCGCTGTCGCCAGCGGCCAGTTTGATGCCTCCAAGGCGGTAGAGGAGCAGCTGAGAAAGTCGTTCCGGACCCGCTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS GCA 90 bp | ACGGTCTCCTCCAGGGCACAGCGGGTCCGGAACGACTTTCTCAGCTaGTCCTCTACCGCCTTGGAGGCATCAAACTGGCCGCTGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: TVSSRAQRVRNDFLS*SSTALEASNWPLAT Trigger: TGTCGCCAGCGGCCAGTTTGATGCCTCCAAGGCGGTAGAGGAGCAGCTGAGAAAGTCGTTCCGGACCCGCTGTGCCCTGGAGGAGACCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 ENSMUST00000198929.2 |
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| CDS CCA 90 bp | TTCTCAGCTGCTCCTCTACCGCCTTGGAGGCATCAAACTGGCCGCTaGCGACAGCGGCGCGCGCGTTCTGCAGCTCCAGACTCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: FSAAPLPPWRHQTGR*RQRRARSAAPDSKP Trigger: TGGCTTTGAGTCTGGAGCTGCAGAACGCGCGCGCCGCTGTCGCCAGCGGCCAGTTTGATGCCTCCAAGGCGGTAGAGGAGCAGCTGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS CCA 90 bp | AACGACTTTCTCAGCTGCTCCTCTACCGCCTTGGAGGCATCAAACTaGCCGCTGGCGACAGCGGCGCGCGCGTTCTGCAGCTCCAGACTC | + |
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Preference number: 5 (lower is better) Translates to: NDFLSCSSTALEASN*PLATAARAFCSSRL Trigger: GAGTCTGGAGCTGCAGAACGCGCGCGCCGCTGTCGCCAGCGGCCAGTTTGATGCCTCCAAGGCGGTAGAGGAGCAGCTGAGAAAGTCGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS CCA 90 bp | TCAAGTGCGGAGATTCGGACCACAGAGAATCTGGGTTGCACAGCATaGTCATGTCTGGGCCCGGCCCGAGCACCTCCTTCAGGGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: SSAEIRTTENLGCTA*SCLGPARAPPSGAG Trigger: CCCCGCCCCTGAAGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031739.6 |
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| CDS CCA 90 bp | TCAAGTGCGGAGATTCGGACCACAGAGAATCTGGGTTGCACAGCATaGTCATGTCTGGGCCCGGCCCGAGCACCTCCCTCCGCCACGGTC | + |
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Preference number: 5 (lower is better) Translates to: SSAEIRTTENLGCTA*SCLGPARAPPSATV Trigger: GACCGTGGCGGAGGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198929.2 |
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| CDS GCA 90 bp | CATCCACTGTCAAGTGCGGAGATTCGGACCACAGAGAATCTGGGTTaGACAGCATGGTCATGTCTGGGCCCGGCCCGAGCACCTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: HPLSSAEIRTTENLG*TAWSCLGPARAPPS Trigger: GGAGGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGACAGTGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198929.2 |
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| CDS CCA 90 bp | CAGCCCATCCACTGTCAAGTGCGGAGATTCGGACCACAGAGAATCTaGGTTGCACAGCATGGTCATGTCTGGGCCCGGCCCGAGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: QPIHCQVRRFGPQRI*VAQHGHVWARPEHL Trigger: GAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGACAGTGGATGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000198929.2 |
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| CDS GCA 90 bp | CATCCACTGTCAAGTGCGGAGATTCGGACCACAGAGAATCTGGGTTaGACAGCATGGTCATGTCTGGGCCCGGCCCGAGCACCTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: HPLSSAEIRTTENLG*TAWSCLGPARAPPS Trigger: TGAAGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGACAGTGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031739.6 |
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| CDS TCA 90 bp | AGAGTTATGAGGGCTACGCTTCCCAGCGCCTCAGCATCCGATGCATaGGAAAGGTATCTTCTGAAGGGCGGGGCCGGGCTTGAAGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: RVMRATLPSASASDA*ERYLLKGGAGLEAL Trigger: TAAGGCTTCAAGCCCGGCCCCGCCCTTCAGAAGATACCTTTCTCATGCATCGGATGCTGAGGCGCTGGGAAGCGTAGCCCTCATAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198929.2 |
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| CDS CCA 72 bp | CGGGCTAAGGCTCAAGTCCAAGCCCGGCTCGGGCTCTaGGGCTCGGGGTTCCGGGGCTCGCGGCTCCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: RAKAQVQARLGL*GSGFRGSRLRG Trigger: CCCCCGGAGCCGCGAGCCCCGGAACCCCGAGCCCCAGAGCCCGAGCCGGGCTTGGACTTGAGCCTTAGCCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031739.6 |
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| CDS TCA 72 bp | AGCGGCTCGGACCGCACCGGGGAGGGCGGCGCCAGTTaGAAACGAACCTGCCGCCCCCTCCGGCTACCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SGSDRTGEGGAS*KRTCRPLRLPP Trigger: GGGCGGTAGCCGGAGGGGGCGGCAGGTTCGTTTTCAACTGGCGCCGCCCTCCCCGGTGCGGTCCGAGCCGCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031739.6 |
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| CDS TCA 72 bp | AGCGGCTCGGACCGCACCGGGGAGGGCGGCGCCAGTTaGAAACGAACCGGAGTAAGACACGCCCGCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SGSDRTGEGGAS*KRTGVRHARRA Trigger: GGCGCGGCGGGCGTGTCTTACTCCGGTTCGTTTTCAACTGGCGCCGCCCTCCCCGGTGCGGTCCGAGCCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126126.8 |
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| CDS CAA 72 bp | CAGCGGCTCGGACCGCACCGGGGAGGGCGGCGCCAGTaGAAAACGAACCGGAGTAAGACACGCCCGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: QRLGPHRGGRRQ*KTNRSKTRPPR Trigger: GCGCGGCGGGCGTGTCTTACTCCGGTTCGTTTTCAACTGGCGCCGCCCTCCCCGGTGCGGTCCGAGCCGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126126.8 |
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| CDS CAA 90 bp | GGCCACCAGCAGCGGCTCGGACCGCACCGGGGAGGGCGGCGCCAGTaGAAAACGAACCGGAGTAAGACACGCCCGCCGCGCCACTCCATT | + |
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Preference number: 6 (lower is better) Translates to: GHQQRLGPHRGGRRQ*KTNRSKTRPPRHSI Trigger: AATGGAGTGGCGCGGCGGGCGTGTCTTACTCCGGTTCGTTTTCAACTGGCGCCGCCCTCCCCGGTGCGGTCCGAGCCGCTGCTGGTGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126126.8 |
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| CDS GCA 72 bp | CTCCAGACTCAAAGCCAGGCTGCTCTGCAGGGCCGGTaGCTCCAGCTCATGATCGTCGCCCGGTGCACCGGC | + |
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Preference number: 6 (lower is better) Translates to: LQTQSQAALQGR*LQLMIVARCTG Trigger: GCCGGTGCACCGGGCGACGATCATGAGCTGGAGGCACCGGCCCTGCAGAGCAGCCTGGCTTTGAGTCTGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS CCA 72 bp | GCTCCTCTACCGCCTTGGAGGCATCAAACTGGCCGCTaGCGACAGCGGCGCGCGCGTTCTGCAGCTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: APLPPWRHQTGR*RQRRARSAAPD Trigger: GTCTGGAGCTGCAGAACGCGCGCGCCGCTGTCGCCAGCGGCCAGTTTGATGCCTCCAAGGCGGTAGAGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS CAA 90 bp | GCACAGCGGGTCCGGAACGACTTTCTCAGCTGCTCCTCTACCGCCTaGGAGGCATCAAACTGGCCGCTGGCGACAGCGGCGCGCGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: AQRVRNDFLSCSSTA*EASNWPLATAARAF Trigger: GAACGCGCGCGCCGCTGTCGCCAGCGGCCAGTTTGATGCCTCCAAGGCGGTAGAGGAGCAGCTGAGAAAGTCGTTCCGGACCCGCTGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS GCA 72 bp | TCAAACTGGCCGCTGGCGACAGCGGCGCGCGCGTTCTaGAGCTCCAGACTCAAAGCCAGGCTGCTCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SNWPLATAARAF*SSRLKARLLCR Trigger: CCTGCAGAGCAGCCTGGCTTTGAGTCTGGAGCTGCAGAACGCGCGCGCCGCTGTCGCCAGCGGCCAGTTTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS CCA 72 bp | CCACAGAGAATCTGGGTTGCACAGCATGGTCATGTCTaGGCCCGGCCCGAGCACCTCCTTCAGGGGCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PQRIWVAQHGHV*ARPEHLLQGRG Trigger: GCCCCGCCCCTGAAGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031739.6 |
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| CDS GCA 72 bp | CGCGCGCGTTCTGCAGCTCCAGACTCAAAGCCAGGCTaGTCTGCAGGGCCGGTGCCTCCAGCTCATGATCGT | + |
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Preference number: 6 (lower is better) Translates to: RARSAAPDSKPG*SAGPVPPAHDR Trigger: ACGATCATGAGCTGGAGGCACCGGCCCTGCAGAGCAGCCTGGCTTTGAGTCTGGAGCTGCAGAACGCGCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS GCA 72 bp | ATCGCCAGCTTCTCCCTCAGCGCCGCGTTCAGTACCTaGTCCTCGGGCACCTGCAGACTCACCAGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: IASFSLSAAFST*SSGTCRLTRSR Trigger: CCGAGACCTGGTGAGTCTGCAGGTGCCCGAGGAGCAGGTACTGAACGCGGCGCTGAGGGAGAAGCTGGCGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 |
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| CDS CCA 72 bp | CCACAGAGAATCTGGGTTGCACAGCATGGTCATGTCTaGGCCCGGCCCGAGCACCTCCCTCCGCCACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PQRIWVAQHGHV*ARPEHLPPPRS Trigger: AGACCGTGGCGGAGGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198929.2 |
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| CDS CAA 72 bp | GTCCGGAACGACTTTCTCAGCTGCTCCTCTACCGCCTaGGAGGCATCAAACTGGCCGCTGGCGACAGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: VRNDFLSCSSTA*EASNWPLATAA Trigger: CGCCGCTGTCGCCAGCGGCCAGTTTGATGCCTCCAAGGCGGTAGAGGAGCAGCTGAGAAAGTCGTTCCGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 ENSMUST00000198929.2 |
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| CDS GCA 72 bp | TCCAGGGCACAGCGGGTCCGGAACGACTTTCTCAGCTaGTCCTCTACCGCCTTGGAGGCATCAAACTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SRAQRVRNDFLS*SSTALEASNWP Trigger: CGGCCAGTTTGATGCCTCCAAGGCGGTAGAGGAGCAGCTGAGAAAGTCGTTCCGGACCCGCTGTGCCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031739.6 ENSMUST00000126126.8 ENSMUST00000198929.2 |
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| CDS CCA 72 bp | GAGATTCGGACCACAGAGAATCTGGGTTGCACAGCATaGTCATGTCTGGGCCCGGCCCGAGCACCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EIRTTENLGCTA*SCLGPARAPPS Trigger: GGAGGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198929.2 |
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| CDS CAA 90 bp | CCATCCACTGTCAAGTGCGGAGATTCGGACCACAGAGAATCTGGGTaGCACAGCATGGTCATGTCTGGGCCCGGCCCGAGCACCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PSTVKCGDSDHRESG*HSMVMSGPGPSTSL Trigger: GAGGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGACAGTGGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198929.2 |
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| CDS TCA 72 bp | AGGGCTACGCTTCCCAGCGCCTCAGCATCCGATGCATaGGAAAGGTATCTTCTGAAGGGCGGGGCCGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RATLPSASASDA*ERYLLKGGAGL Trigger: AAGCCCGGCCCCGCCCTTCAGAAGATACCTTTCTCATGCATCGGATGCTGAGGCGCTGGGAAGCGTAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198929.2 |
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| CDS CAA 90 bp | CCATCCACTGTCAAGTGCGGAGATTCGGACCACAGAGAATCTGGGTaGCACAGCATGGTCATGTCTGGGCCCGGCCCGAGCACCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PSTVKCGDSDHRESG*HSMVMSGPGPSTSF Trigger: GAAGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGACAGTGGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031739.6 |
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| CDS GCA 72 bp | TCAAGTGCGGAGATTCGGACCACAGAGAATCTGGGTTaGACAGCATGGTCATGTCTGGGCCCGGCCCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSAEIRTTENLG*TAWSCLGPARA Trigger: TGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000198929.2 |
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| CDS GCA 72 bp | TATGAGGGCTACGCTTCCCAGCGCCTCAGCATCCGATaGATGAGAAAGGTATCTTCTGAAGGGCGGGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: YEGYASQRLSIR*MRKVSSEGRGR Trigger: CCGGCCCCGCCCTTCAGAAGATACCTTTCTCATGCATCGGATGCTGAGGCGCTGGGAAGCGTAGCCCTCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198929.2 |
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| CDS CCA 72 bp | GAGATTCGGACCACAGAGAATCTGGGTTGCACAGCATaGTCATGTCTGGGCCCGGCCCGAGCACCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: EIRTTENLGCTA*SCLGPARAPPS Trigger: TGAAGGAGGTGCTCGGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031739.6 |
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| CDS CCA 72 bp | CACTGTCAAGTGCGGAGATTCGGACCACAGAGAATCTaGGTTGCACAGCATGGTCATGTCTGGGCCCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: HCQVRRFGPQRI*VAQHGHVWARP Trigger: GGGCCGGGCCCAGACATGACCATGCTGTGCAACCCAGATTCTCTGTGGTCCGAATCTCCGCACTTGACAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000198929.2 |
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| CDS TCA 72 bp | ATGAGAAAGGTATCTTCTGAAGGGCGGGGCCGGGCTTaGAGCCTTAGTGGGGGCAGCCCATCCACTGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: MRKVSSEGRGRA*SLSGGSPSTVK Trigger: CTTGACAGTGGATGGGCTGCCCCCACTAAGGCTTCAAGCCCGGCCCCGCCCTTCAGAAGATACCTTTCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031739.6 ENSMUST00000198929.2 |
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