Pregenerated sensors for PPP1R27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025129Ensembl transcript IDs: ENSMUST00000026121.3
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCCTGGCTGCCTCACTGCACATCCAGTGGGCACTCTAGTCCTTaGGGCAAGGTGCTTGCCACTTCTCCAAGGAGGCGCAAGCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: PAWLPHCTSSGHSSP*GKVLATSPRRRKPQ Trigger: TTGGGGCTTGCGCCTCCTTGGAGAAGTGGCAAGCACCTTGCCCCAAGGACTAGAGTGCCCACTGGATGTGCAGTGAGGCAGCCAGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| 3UTR CAA 90 bp | CTCACTGCACATCCAGTGGGCACTCTAGTCCTTGGGGCAAGGTGCTaGCCACTTCTCCAAGGAGGCGCAAGCCCCAAAGGGCTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LTAHPVGTLVLGARC*PLLQGGASPKGLSW Trigger: CCAGGAGAGCCCTTTGGGGCTTGCGCCTCCTTGGAGAAGTGGCAAGCACCTTGCCCCAAGGACTAGAGTGCCCACTGGATGTGCAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| 3UTR GCA 72 bp | GCACATCCAGTGGGCACTCTAGTCCTTGGGGCAAGGTaGTTGCCACTTCTCCAAGGAGGCGCAAGCCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: AHPVGTLVLGAR*LPLLQGGASPK Trigger: TTTGGGGCTTGCGCCTCCTTGGAGAAGTGGCAAGCACCTTGCCCCAAGGACTAGAGTGCCCACTGGATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| 3UTR CAA 72 bp | CATCCAGTGGGCACTCTAGTCCTTGGGGCAAGGTGCTaGCCACTTCTCCAAGGAGGCGCAAGCCCCAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: HPVGTLVLGARC*PLLQGGASPKG Trigger: CCCTTTGGGGCTTGCGCCTCCTTGGAGAAGTGGCAAGCACCTTGCCCCAAGGACTAGAGTGCCCACTGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR GCA 90 bp | GCAAGGTGCTTGCCACTTCTCCAAGGAGGCGCAAGCCCCAAAGGGCTCTCCTGGCAGGGTACCCATCACTaGAAGCGATGTGCAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: ARCLPLLQGGASPKGLSWQGTHH*KRCAVV Trigger: CACCACTGCACATCGCTTGCAGTGATGGGTACCCTG...CCAGGAGAGCCCTTTGGGGCTTGCGCCTCCTTGGAGAAGTGGCAAGCACCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR TCA 90 bp | AAGCCAGGCCAGAGAAATGGGTATAGGGGCAAGAGGGTCGTTCCCCACAAGTCCGTCTCATCCCGCTGGTaGATGTCAGCCCCGTATTTG | + |
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Preference number: 4 (lower is better) Translates to: KPGQRNGYRGKRVVPHKSVSSRW*MSAPYL Trigger: CAAATACGGGGCTGACATTCACCAGCGGGATGAGAC...GGACTTGTGGGGAACGACCCTCTTGCCCCTATACCCATTTCTCTGGCCTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR CCA 90 bp | AGCCAGGCCAGAGAAATGGGTATAGGGGCAAGAGGGTCGTTCCCCACAAGTCCTGCAAGCGATGTGCAGTaGTGTCCAGCCTGTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: SQAREMGIGARGSFPTSPASDVQ*CPACLI Trigger: GATGAGACAGGCTGGACACCACTGCACATCGCTTGC...AGGACTTGTGGGGAACGACCCTCTTGCCCCTATACCCATTTCTCTGGCCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR TCA 90 bp | AGCCAGGCCAGAGAAATGGGTATAGGGGCAAGAGGGTCGTTCCCCACAAGTCCTCTGCCCCCAAAGAGATaGGATACCTGGCTATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SQAREMGIGARGSFPTSPLPPKR*DTWLCQ Trigger: CTGACATAGCCAGGTATCTCATCTCTTTGGGGGCAG...AGGACTTGTGGGGAACGACCCTCTTGCCCCTATACCCATTTCTCTGGCCTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR CCA 90 bp | ACTGCACATCCAGTGGGCACTCTAGTCCTTGGGGCAAGGTGCTTGCCACTTCTCGATCGCCATCATCATTaGCTGCATCTCTGTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TAHPVGTLVLGARCLPLLDRHHH*LHLCLP Trigger: GGGCAGACAGAGATGCAGCCAATGATGATGGCGATC...GAGAAGTGGCAAGCACCTTGCCCCAAGGACTAGAGTGCCCACTGGATGTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR TCA 90 bp | AGTCCTAACCAGCCTGGCTGCCTCACTGCACATCCAGTGGGCACTCTAGTCCTTTGTCAGCCCCGTATTTaGCTAGCAACTTCACACACT | + |
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Preference number: 4 (lower is better) Translates to: SPNQPGCLTAHPVGTLVLCQPRI*LATSHT Trigger: AGTGTGTGAAGTTGCTAGTCAAATACGGGGCTGACA...AAGGACTAGAGTGCCCACTGGATGTGCAGTGAGGCAGCCAGGCTGGTTAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR GCA 90 bp | CTGGAGAAAAAGCCAGGCCAGAGAAATGGGTATAGGGGCAAGAGGGTCGTTCCCGGCTGCATCTCTGTCTaGCCCCAAAGAGATGAGATA | + |
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Preference number: 4 (lower is better) Translates to: LEKKPGQRNGYRGKRVVPGCISV*PQRDEI Trigger: TATCTCATCTCTTTGGGGGCAGACAGAGATGCAGCC...GGGAACGACCCTCTTGCCCCTATACCCATTTCTCTGGCCTGGCTTTTTCTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR CAA 90 bp | GCAAGGTGCTTGCCACTTCTCCAAGGAGGCGCAAGCCCCAAAGGGCTCTCCTGGCTGCTCCAGGTCGCCTaGTCGAATGTGGTCCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ARCLPLLQGGASPKGLSWLLQVA*SNVVQE Trigger: TTCTTGGACCACATTCGACAAGGCGACCTGGAGCAG...CCAGGAGAGCCCTTTGGGGCTTGCGCCTCCTTGGAGAAGTGGCAAGCACCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS CCA 90 bp | GCCCGGATAAAGCGTCCCACCTGCTCCAGGTCGCCTTGTCGAATGTaGTCCAAGAAGAGAACATCGTTAGGGAAGCGCACGCTCCGATCG | + |
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Preference number: 5 (lower is better) Translates to: ARIKRPTCSRSPCRM*SKKRTSLGKRTLRS Trigger: CGATCGGAGCGTGCGCTTCCCTAACGATGTTCTCTTCTTGGACCACATTCGACAAGGCGACCTGGAGCAGGTGGGACGCTTTATCCGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS CCA 90 bp | ATACCTGGCTATGTCAGGGTACCCATCACTGCAAGCGATGTGCAGTaGTGTCCAGCCTGTCTCATCCCGCTGGTGAATGTCAGCCCCGTA | + |
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Preference number: 5 (lower is better) Translates to: IPGYVRVPITASDVQ*CPACLIPLVNVSPV Trigger: TACGGGGCTGACATTCACCAGCGGGATGAGACAGGCTGGACACCACTGCACATCGCTTGCAGTGATGGGTACCCTGACATAGCCAGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR CAA 90 bp | CTTGGGGCAAGGTGCTTGCCACTTCTCCAAGGAGGCGCAAGCCCCAAAGGGCTCATGTCAGCCCCGTATTaGACTAGCAACTTCACACAC | + |
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Preference number: 5 (lower is better) Translates to: LGARCLPLLQGGASPKGLMSAPY*TSNFTH Trigger: GTGTGTGAAGTTGCTAGTCAAATACGGGGCTGACAT...GAGCCCTTTGGGGCTTGCGCCTCCTTGGAGAAGTGGCAAGCACCTTGCCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS-3UTR CAA 90 bp | CTCACTGCACATCCAGTGGGCACTCTAGTCCTTGGGGCAAGGTGCTTGCCACTTAGATCGCCATCATCATaGGCTGCATCTCTGTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LTAHPVGTLVLGARCLPLRSPSS*AASLSA Trigger: GGCAGACAGAGATGCAGCCAATGATGATGGCGATCT...AAGTGGCAAGCACCTTGCCCCAAGGACTAGAGTGCCCACTGGATGTGCAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS TCA 90 bp | CTGCAAGCGATGTGCAGTGGTGTCCAGCCTGTCTCATCCCGCTGGTaGATGTCAGCCCCGTATTTGACTAGCAACTTCACACACTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: LQAMCSGVQPVSSRW*MSAPYLTSNFTHSR Trigger: CCTAGAGTGTGTGAAGTTGCTAGTCAAATACGGGGCTGACATTCACCAGCGGGATGAGACAGGCTGGACACCACTGCACATCGCTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS GCA 90 bp | ATAGTGTCTAGGGAGACTTTCCGAGCCCGGATAAAGCGTCCCACCTaGTCCAGGTCGCCTTGTCGAATGTGGTCCAAGAAGAGAACATCG | + |
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Preference number: 5 (lower is better) Translates to: IVSRETFRARIKRPT*SRSPCRMWSKKRTS Trigger: CGATGTTCTCTTCTTGGACCACATTCGACAAGGCGACCTGGAGCAGGTGGGACGCTTTATCCGGGCTCGGAAAGTCTCCCTAGACACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS GCA 90 bp | GTCCGGGTCAATAAGGTCGGAGGGCAGATCGCCATCATCATTGGCTaGATCTCTGTCTGCCCCCAAAGAGATGAGATACCTGGCTATGTC | + |
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Preference number: 5 (lower is better) Translates to: VRVNKVGGQIAIIIG*ISVCPQRDEIPGYV Trigger: GACATAGCCAGGTATCTCATCTCTTTGGGGGCAGACAGAGATGCAGCCAATGATGATGGCGATCTGCCCTCCGACCTTATTGACCCGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS TCA 90 bp | GTGTCCAGCCTGTCTCATCCCGCTGGTGAATGTCAGCCCCGTATTTaGCTAGCAACTTCACACACTCTAGGTTTCCAGAGAGCACAGCTT | + |
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Preference number: 5 (lower is better) Translates to: VSSLSHPAGECQPRI*LATSHTLGFQRAQL Trigger: AAGCTGTGCTCTCTGGAAACCTAGAGTGTGTGAAGTTGCTAGTCAAATACGGGGCTGACATTCACCAGCGGGATGAGACAGGCTGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS TCA 90 bp | GATCGCCATCATCATTGGCTGCATCTCTGTCTGCCCCCAAAGAGATaGGATACCTGGCTATGTCAGGGTACCCATCACTGCAAGCGATGT | + |
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Preference number: 5 (lower is better) Translates to: DRHHHWLHLCLPPKR*DTWLCQGTHHCKRC Trigger: ACATCGCTTGCAGTGATGGGTACCCTGACATAGCCAGGTATCTCATCTCTTTGGGGGCAGACAGAGATGCAGCCAATGATGATGGCGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS GCA 90 bp | ACTAGCAACTTCACACACTCTAGGTTTCCAGAGAGCACAGCTTCATaGAGAGCAGCCAGTCCTGAGGGATGGATAGTGTCTAGGGAGACT | + |
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Preference number: 5 (lower is better) Translates to: TSNFTHSRFPESTAS*RAASPEGWIVSRET Trigger: AGTCTCCCTAGACACTATCCATCCCTCAGGACTGGCTGCTCTGCATGAAGCTGTGCTCTCTGGAAACCTAGAGTGTGTGAAGTTGCTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS GCA 72 bp | AGGGAGACTTTCCGAGCCCGGATAAAGCGTCCCACCTaGTCCAGGTCGCCTTGTCGAATGTGGTCCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RETFRARIKRPT*SRSPCRMWSKK Trigger: CTTCTTGGACCACATTCGACAAGGCGACCTGGAGCAGGTGGGACGCTTTATCCGGGCTCGGAAAGTCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS CAA 90 bp | GACTTTCCGAGCCCGGATAAAGCGTCCCACCTGCTCCAGGTCGCCTaGTCGAATGTGGTCCAAGAAGAGAACATCGTTAGGGAAGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: DFPSPDKASHLLQVA*SNVVQEENIVREAH Trigger: GTGCGCTTCCCTAACGATGTTCTCTTCTTGGACCACATTCGACAAGGCGACCTGGAGCAGGTGGGACGCTTTATCCGGGCTCGGAAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS CCA 72 bp | AAGCGTCCCACCTGCTCCAGGTCGCCTTGTCGAATGTaGTCCAAGAAGAGAACATCGTTAGGGAAGCGCACG | + |
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Preference number: 6 (lower is better) Translates to: KRPTCSRSPCRM*SKKRTSLGKRT Trigger: CGTGCGCTTCCCTAACGATGTTCTCTTCTTGGACCACATTCGACAAGGCGACCTGGAGCAGGTGGGACGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS CCA 72 bp | AGCACAGCTTCATGCAGAGCAGCCAGTCCTGAGGGATaGATAGTGTCTAGGGAGACTTTCCGAGCCCGGATA | + |
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Preference number: 6 (lower is better) Translates to: STASCRAASPEG*IVSRETFRARI Trigger: TATCCGGGCTCGGAAAGTCTCCCTAGACACTATCCATCCCTCAGGACTGGCTGCTCTGCATGAAGCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS CAA 72 bp | AGCCCGGATAAAGCGTCCCACCTGCTCCAGGTCGCCTaGTCGAATGTGGTCCAAGAAGAGAACATCGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: SPDKASHLLQVA*SNVVQEENIVR Trigger: CCTAACGATGTTCTCTTCTTGGACCACATTCGACAAGGCGACCTGGAGCAGGTGGGACGCTTTATCCGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS GCA 72 bp | GGGCAGATCGCCATCATCATTGGCTGCATCTCTGTCTaGCCCCAAAGAGATGAGATACCTGGCTATGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GQIAIIIGCISV*PQRDEIPGYVR Trigger: CCTGACATAGCCAGGTATCTCATCTCTTTGGGGGCAGACAGAGATGCAGCCAATGATGATGGCGATCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS CAA 90 bp | TTGAAGTCCGGGTCAATAAGGTCGGAGGGCAGATCGCCATCATCATaGGCTGCATCTCTGTCTGCCCCCAAAGAGATGAGATACCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LKSGSIRSEGRSPSS*AASLSAPKEMRYLA Trigger: AGCCAGGTATCTCATCTCTTTGGGGGCAGACAGAGATGCAGCCAATGATGATGGCGATCTGCCCTCCGACCTTATTGACCCGGACTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS TCA 72 bp | ATGTGCAGTGGTGTCCAGCCTGTCTCATCCCGCTGGTaGATGTCAGCCCCGTATTTGACTAGCAACTTCACA | + |
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Preference number: 6 (lower is better) Translates to: MCSGVQPVSSRW*MSAPYLTSNFT Trigger: TGTGAAGTTGCTAGTCAAATACGGGGCTGACATTCACCAGCGGGATGAGACAGGCTGGACACCACTGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS GCA 72 bp | AATAAGGTCGGAGGGCAGATCGCCATCATCATTGGCTaGATCTCTGTCTGCCCCCAAAGAGATGAGATACCT | + |
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Preference number: 6 (lower is better) Translates to: NKVGGQIAIIIG*ISVCPQRDEIP Trigger: AGGTATCTCATCTCTTTGGGGGCAGACAGAGATGCAGCCAATGATGATGGCGATCTGCCCTCCGACCTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS CAA 72 bp | TCCATGCTGGTTCCTTTGAAGAGTTCCACCAAGTCTTaGAAGTCCGGGTCAATAAGGTCGGAGGGCAGATCG | + |
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Preference number: 6 (lower is better) Translates to: SMLVPLKSSTKS*KSGSIRSEGRS Trigger: CGATCTGCCCTCCGACCTTATTGACCCGGACTTCAAAGACTTGGTGGAACTCTTCAAAGGAACCAGCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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| CDS TCA 72 bp | CTGTCTCATCCCGCTGGTGAATGTCAGCCCCGTATTTaGCTAGCAACTTCACACACTCTAGGTTTCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LSHPAGECQPRI*LATSHTLGFQR Trigger: TCTCTGGAAACCTAGAGTGTGTGAAGTTGCTAGTCAAATACGGGGCTGACATTCACCAGCGGGATGAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026121.3 |
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