Pregenerated sensors for PPP1R21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034709Ensembl transcript IDs: ENSMUST00000038551.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTCCAAGGGCACACGGCTTCCCAGCGGTCACCAGCACTGGCTGTaGAGTCTGGCTCGAGTCTCAGGGCAGAACAGTCACTGCGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: KSKGTRLPSGHQHWL*SLARVSGQNSHCGG Trigger: GCCACCGCAGTGACTGTTCTGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGCCGTGTGCCCTTGGACTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR CCA 90 bp | CTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCACAGACAGCACTaGCTCATCTACCAAGTCCAAGGGCACACGGCTTCCCAGCGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LFTNILQRSPGHRQH*LIYQVQGHTASQRS Trigger: TGACCGCTGGGAAGCCGTGTGCCCTTGGACTTGGTAGATGAGCCAGTGCTGTCTGTGACCTGGAGACCTTTGAAGAATATTTGTGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR GCA 90 bp | ATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTaGTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: MCTAFHLTVNMGLCI*FCSQIFFKGLQVTD Trigger: GTCTGTGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR-3UTR CCA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTACTGGCTGTGGAGTCTaGCTCGAGTCTCAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RKETYNVHGYVYCFPSDCTGCGV*LESQGR Trigger: TCTGCCCTGAGACTCGAGCCAGACTCCACAGCCAGT...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGTAAAAACAGCGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTGGGCAGAACAGTCACTaGGGTGGCAGCCTAGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HSKNSVRKPTMSTGMCTAGQNSH*GGSLGH Trigger: ATGACCTAGGCTGCCACCGCAGTGACTGTTCTGCCC...AGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACGCTGTTTTTACTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTGGTCACAGACAGCACTaGCTCATCTACCAAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: TVNMGLCICFCSQIFFKGGHRQH*LIYQVQ Trigger: TTGGACTTGGTAGATGAGCCAGTGCTGTCTGTGACC...ACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR CAA 90 bp | TATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTaGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: YVYCFPSDCQHGALY*LLFTNILQRSPGHR Trigger: TCTGTGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR CCA 72 bp | GGCTTCCCAGCGGTCACCAGCACTGGCTGTGGAGTCTaGCTCGAGTCTCAGGGCAGAACAGTCACTGCGGTG | + |
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Preference number: 3 (lower is better) Translates to: GFPAVTSTGCGV*LESQGRTVTAV Trigger: CACCGCAGTGACTGTTCTGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR CCA 72 bp | AATATTCTTCAAAGGTCTCCAGGTCACAGACAGCACTaGCTCATCTACCAAGTCCAAGGGCACACGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: NILQRSPGHRQH*LIYQVQGHTAS Trigger: GGAAGCCGTGTGCCCTTGGACTTGGTAGATGAGCCAGTGCTGTCTGTGACCTGGAGACCTTTGAAGAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR TCA 72 bp | CTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTaGCTGTCAACATGGGGCTCTGTATTTGCTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: LQCPRVCVLLSI*LSTWGSVFASV Trigger: AACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR GCA 72 bp | AGCAATTATTTGAACACAGAGAGTGTACTGTACAGCTaGAGACATGACAGCGAACCCATAGGCTCTAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SNYLNTESVLYS*RHDSEPIGSRR Trigger: CCTTCTAGAGCCTATGGGTTCGCTGTCATGTCTGCAGCTGTACAGTACACTCTCTGTGTTCAAATAATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR GCA 72 bp | GCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTaGTTCTGTTCACAAATATTCTTCAAAGGTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: AFHLTVNMGLCI*FCSQIFFKGLQ Trigger: CTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | GCTTCCCAGCGGTCACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCATCAGCCAGCTGCAGCTaGGATGTGAGCTCCGCTATC | + |
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Preference number: 4 (lower is better) Translates to: ASQRSPALAVESGSSLRASASCS*DVSSAI Trigger: GATAGCGGAGCTCACATCTCAGCTGCAGCTGGCTGA...TGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | GCTTCCCAGCGGTCACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCAGCAAGGCGAGGAGAGTaGCATACGTCTGCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ASQRSPALAVESGSSLRAARRGE*HTSAAS Trigger: AGAAGCTGCAGACGTATGTCACTCTCCTCGCCTTGC...TGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | CACACGGCTTCCCAGCGGTCACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCTCCCAACCAGACTGGTaGTCTGCACAGGCTCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: HTASQRSPALAVESGSSLSQPDW*SAQALS Trigger: TGACAGAGCCTGTGCAGAGCACCAGTCTGGTTGGGA...GAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGCCGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CACACGGCTTCCCAGCGGTCACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCCGTAGCTCCGCTTGGTaGTCATCAGCTCGTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: HTASQRSPALAVESGSSLRSSAW*SSARPE Trigger: TTCAGGACGAGCTGATGACCACCAAGCGGAGCTACG...GAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGCCGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | CACACGGCTTCCCAGCGGTCACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCGGGCCCATAGCTCAGTaGAGCAATGAAGTAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HTASQRSPALAVESGSSLGPIAQ*SNEVVH Trigger: GTGGACTACTTCATTGCTTCACTGAGCTATGGGCCC...GAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGCCGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCAGAACAGTCACTGCATCCGCTGGCTGTCTTaGGCCCATAGCTCAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HQHWLWSLARVSGQNSHCIRWLS*AHSSVK Trigger: CTTCACTGAGCTATGGGCCCAAGACAGCCAGCGGAT...GCAGTGACTGTTCTGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | TATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGGCCAGCCCAGGCAGCTaGGCACTGGTGGTGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: YVYCFPSDCQHGALYLLLASPGS*ALVVPR Trigger: GCGGGGCACCACCAGTGCCCAGCTGCCTGGGCTGGC...CAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | GCTTCCCAGCGGTCACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCACTTCTGATTCAATGGTaGTATAGTGTCTATGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ASQRSPALAVESGSSLRALLIQW*YSVYGR Trigger: TCTGCCATAGACACTATATCACCATTGAATCAGAAG...TGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CACGGGTATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGACAGTCGCATTCTCCTaGGCCAGCCCAGGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HGYVYCFPSDCQHGALYLTVAFS*ASPGSW Trigger: CCAGCTGCCTGGGCTGGCCCAGGAGAATGCGACTGT...CAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATACCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | CACAGTAAAAACAGCGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTGCTGGGCACTGGTGGTaGCCCGCAGCCTGTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: HSKNSVRKPTMSTGMCTAAGHWW*PAACLQ Trigger: TTGCAGACAGGCTGCGGGGCACCACCAGTGCCCAGC...AGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACGCTGTTTTTACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTTGTCAGGACCTTGGCTaGAGCCTCCTCCTGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RKETYNVHGYVYCFPSDCCQDLG*SLLLAG Trigger: TCCAGCCAGGAGGAGGCTGCAGCCAAGGTCCTGACA...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | CACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCAGAACAGTCACTGCTATTGGGAGAACTTCTaGTTCAATGGTGATATAGTG | + |
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Preference number: 4 (lower is better) Translates to: HQHWLWSLARVSGQNSHCYWENF*FNGDIV Trigger: CACTATATCACCATTGAATCAGAAGTTCTCCCAATA...GCAGTGACTGTTCTGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTCGTCCTGAAGCCTGCTaGTGTTCTGACTGGCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: RKETYNVHGYVYCFPSDCRPEAC*CSDWLA Trigger: GGCTAGCCAGTCAGAACATCAGCAGGCTTCAGGACG...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | CACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCAGAACAGTCACTGCTTTTCTTGTTTTTCTTaGCTCGAGGTTCACTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: HQHWLWSLARVSGQNSHCFSCFS*LEVHLV Trigger: CACTAAGTGAACCTCGAGGCAAGAAAAACAAGAAAA...GCAGTGACTGTTCTGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | TATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGGCCGGTACAAGATCCTaGACAAAAGCCAGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: YVYCFPSDCQHGALYLLLAGTRS*TKARAC Trigger: GCAGGCCCTGGCTTTTGTTCAGGATCTTGTACCGGC...CAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | TATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGGGCGTAGAAGTGCACTaGCTTACTGTCAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: YVYCFPSDCQHGALYLLLGVEVH*LTVSQL Trigger: CAGCTGGCTGACAGTAAGTCAGTGCACTTCTACGCC...CAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | TGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCAGGTGGTCGCTCATCATaGTCAGCTGATCCTCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: CTAFHLTVNMGLCICFCSGGRSS*SADPRS Trigger: GCTACGAGGATCAGCTGAGCATGATGAGCGACCACC...TGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | TGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCATCAGAGCAGCAGAGCTaGCCTGCTCATCCACAACAC | + |
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Preference number: 4 (lower is better) Translates to: CTAFHLTVNMGLCICFCSSEQQS*PAHPQH Trigger: GTGTTGTGGATGAGCAGGCCAGCTCTGCTGCTCTGA...TGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | TGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCAGCAGCAGAGCTGGCCTaGTCATCCACAACACCTTTC | + |
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Preference number: 4 (lower is better) Translates to: WGSVFASVHKYSSKVSRSAAELA*SSTTPF Trigger: GAAAGGTGTTGTGGATGAGCAGGCCAGCTCTGCTGC...TGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | TGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCAACAAAAGCCAGGGCCTaGCCAGCTATATCTCGCATC | + |
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Preference number: 4 (lower is better) Translates to: CTAFHLTVNMGLCICFCSTKARA*PAISRI Trigger: GATGCGAGATATAGCTGGGCAGGCCCTGGCTTTTGT...TGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | TGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCACTTCTGTTTCAAGAGTaGCCAGCCGACTCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CTAFHLTVNMGLCICFCSLLFQE*PADSSA Trigger: AGCTGAGGAGTCGGCTGGCCACTCTTGAAACAGAAG...TGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTACATCCCAACCAGACTaGTGCTCTGCACAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HGALYLLLFTNILQRSPGTSQPD*CSAQAL Trigger: CAGAGCCTGTGCAGAGCACCAGTCTGGTTGGGATGT...ACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | CATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTAGCTTCGAGTACTCCTaGGCCAGCTTCTGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: HGALYLLLFTNILQRSPGSFEYS*ASFWYF Trigger: GAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCT...ACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTATCACAGCTTGGTGCTaGGCAGCTTCTGTTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: RKETYNVHGYVYCFPSDCITAWC*AASVSR Trigger: TCTTGAAACAGAAGCTGCTCAGCACCAAGCTGTGAT...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | TGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCACTCTCAGTGCAGGTGTaGAGAGGGAAGATTCACACT | + |
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Preference number: 4 (lower is better) Translates to: CTAFHLTVNMGLCICFCSLSVQV*RGKIHT Trigger: AGTGTGAATCTTCCCTCTGCACACCTGCACTGAGAG...TGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CACAGTAAAAACAGCGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTGGAGTTCCACCCTCTTaGCAAGCTGCAGATTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: HSKNSVRKPTMSTGMCTAGVPPS*QAADFE Trigger: TTCGAAATCTGCAGCTTGCCAAGAGGGTGGAACTCC...AGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACGCTGTTTTTACTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTTCTGGAGTTTCTCAATaGTCTCCATGTACTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RKETYNVHGYVYCFPSDCSGVSQ*SPCTSG Trigger: CCCGGAAGTACATGGAGACCATTGAGAAACTCCAGA...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTTTTGCCTTGTCGCTCTaGAGTTTCTCAATGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RKETYNVHGYVYCFPSDCFALSL*SFSMVS Trigger: GGAGACCATTGAGAAACTCCAGAGCGACAAGGCAAA...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR TCA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTTGCTCTTGGCTCAACTaGGAAGAAGATTCACCACTT | + |
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Preference number: 4 (lower is better) Translates to: RKETYNVHGYVYCFPSDCCSWLN*EEDSPL Trigger: AAGTGGTGAATCTTCTTCTCAGTTGAGCCAAGAGCA...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | CTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCACAGACAGGTAAGGCACAGACTCTaGGAGGGGCGTTCTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LYLLLFTNILQRSPGHRQVRHRL*EGRSQR Trigger: TCTTTGAGAACGCCCCTCGCAGAGTCTGTGCCTTAC...CTGTCTGTGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCACAGACAGTCGAAGGAGTCCATCTaGCTCTGTACTTGGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LYLLLFTNILQRSPGHRQSKESI*LCTWQG Trigger: GCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGA...CTGTCTGTGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTTTCATGCTGCATAGGTaGTCGCTCATCATGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: HGALYLLLFTNILQRSPGFMLHR*SLIMLS Trigger: GCTGAGCATGATGAGCGACCACCTATGCAGCATGAA...ACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCACAGACAGTCTCCTCCCTCTGTTTaGACAGGGTCTCGTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: LYLLLFTNILQRSPGHRQSPPSV*TGSRSC Trigger: GCATGAACGAGACCCTGTCCAAACAGAGGGAGGAGA...CTGTCTGTGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | CATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTGGGGCGGACATACGATaGGTTTTCATGAAGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: HGALYLLLFTNILQRSPGGADIR*VFMKVL Trigger: CAATACCTTCATGAAAACGCATCGTATGTCCGCCCC...ACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | ACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTGTCCATTTCCTGCTaGAGTTTCCTCAAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVNMGLCICFCSQIFFKGLSISC*SFLKDW Trigger: CCAGTCCTTGAGGAAACTGCAGCAGGAAATGGACAG...ACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | CACAGTAAAAACAGCGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTAGTTTCCTCAAGGACTaGTCCTTCATTTTCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSKNSVRKPTMSTGMCTASFLKD*SFIFSC Trigger: ACAACTGAAAATGAAGGACCAGTCCTTGAGGAAACT...AGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACGCTGTTTTTACTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | ACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTGCAGTCGACATTCCTTaGCCTCCTTTTCTAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVNMGLCICFCSQIFFKGAVDIP*PPFLES Trigger: AGACTCTAGAAAAGGAGGCCAAGGAATGTCGACTGC...ACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| 3UTR CAA 72 bp | TGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTaGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CFPSDCQHGALY*LLFTNILQRSP Trigger: TGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR GCA 90 bp | ACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTATGCTCTCGAATAAGTaGAGCATTCCTTCCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVNMGLCICFCSQIFFKGMLSNK*SIPSSR Trigger: CCTTGAGGAAGGAATGCTGCACTTATTCGAGAGCAT...ACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CCA 90 bp | ACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTGTCTGCAATCCGTTaGTTTTCTTTCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVNMGLCICFCSQIFFKGLSAIR*FSFSSL Trigger: CAAGCTGGAGAAAGAAAACCAACGGATTGCAGACAG...ACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATGTTGACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 90 bp | CCGGAGCCTCACTGTCTGGCGTCCTGGTTAACATCCCAACCAGACTaGTGCTCTGCACAGGCTCTGTCAGGACCTTGGCTGCAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PEPHCLASWLTSQPD*CSAQALSGPWLQPP Trigger: AGGAGGCTGCAGCCAAGGTCCTGACAGAGCCTGTGCAGAGCACCAGTCTGGTTGGGATGTTAACCAGGACGCCAGACAGTGAGGCTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 90 bp | TCACTGTCTGGCGTCCTGGTTAACATCCCAACCAGACTGGTGCTCTaGACAGGCTCTGTCAGGACCTTGGCTGCAGCCTCCTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSGVLVNIPTRLVL*TGSVRTLAAASSWL Trigger: CAGCCAGGAGGAGGCTGCAGCCAAGGTCCTGACAGAGCCTGTGCAGAGCACCAGTCTGGTTGGGATGTTAACCAGGACGCCAGACAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 90 bp | GGCCGTCGATCACAGCTTGGTGCTGAGCAGCTTCTGTTTCAAGAGTaGCCAGCCGACTCCTCAGCTCCGCTTCCACGTGCCTGTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRRSQLGAEQLLFQE*PADSSAPLPRACDA Trigger: AGCATCACAGGCACGTGGAAGCGGAGCTGAGGAGTCGGCTGGCCACTCTTGAAACAGAAGCTGCTCAGCACCAAGCTGTGATCGACGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 90 bp | TCAAGAGTGGCCAGCCGACTCCTCAGCTCCGCTTCCACGTGCCTGTaGTGCTCGTCCGCTTCGAAGAACTGTATGTGCAGCCGTTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRVASRLLSSASTCL*CSSASKNCMCSRSF Trigger: GAACGAACGGCTGCACATACAGTTCTTCGAAGCGGACGAGCATCACAGGCACGTGGAAGCGGAGCTGAGGAGTCGGCTGGCCACTCTTGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 90 bp | GTCTCCATGTACTTCCGGGTCAGGCCGTCGATCACAGCTTGGTGCTaGGCAGCTTCTGTTTCAAGAGTGGCCAGCCGACTCCTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSMYFRVRPSITAWC*AASVSRVASRLLSS Trigger: GGAGCTGAGGAGTCGGCTGGCCACTCTTGAAACAGAAGCTGCTCAGCACCAAGCTGTGATCGACGGCCTGACCCGGAAGTACATGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 90 bp | GGTCTTCACGGGACTCAACATCCGGAGCCTCACTGTCTGGCGTCCTaGTTAACATCCCAACCAGACTGGTGCTCTGCACAGGCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLHGTQHPEPHCLAS*LTSQPDWCSAQALS Trigger: TGACAGAGCCTGTGCAGAGCACCAGTCTGGTTGGGATGTTAACCAGGACGCCAGACAGTGAGGCTCCGGATGTTGAGTCCCGTGAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCAGAACAGTCACTGCCGCAGTCGACATTCCTaGGCCTCCTTTTCTAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HQHWLWSLARVSGQNSHCRSRHS*ASFSRV Trigger: GACTCTAGAAAAGGAGGCCAAGGAATGTCGACTGCG...GCAGTGACTGTTCTGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 90 bp | TACGTCTGCAGCTTCTCAAACACGGCTGTCATCGTCTTCATGTCCTaGGACAGCTCCAGGTTCCTGGCTCTCAGTGCAGGTGTGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YVCSFSNTAVIVFMS*DSSRFLALSAGVQR Trigger: CCTCTGCACACCTGCACTGAGAGCCAGGAACCTGGAGCTGTCCCAGGACATGAAGACGATGACAGCCGTGTTTGAGAAGCTGCAGACGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | GCTTCCCAGCGGTCACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCAGTCCTTCATTTTCAGTaGTTCCTTCAGAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASQRSPALAVESGSSLRAVLHFQ*FLQSSR Trigger: TCTGCTGCTCTGAAGGAACAACTGAAAATGAAGGAC...TGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTGACCGCTGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 90 bp | GTTTGGACAGGGTCTCGTTCATGCTGCATAGGTGGTCGCTCATCATaGTCAGCTGATCCTCGTAGCTCCGCTTGGTGGTCATCAGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VWTGSRSCCIGGRSS*SADPRSSAWWSSAR Trigger: ACGAGCTGATGACCACCAAGCGGAGCTACGAGGATCAGCTGAGCATGATGAGCGACCACCTATGCAGCATGAACGAGACCCTGTCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 90 bp | GCGTGTCAATCTCCTCCCTCTGTTTGGACAGGGTCTCGTTCATGCTaGATAGGTGGTCGCTCATCATGCTCAGCTGATCCTCGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACQSPPSVWTGSRSC*IGGRSSCSADPRSS Trigger: GGAGCTACGAGGATCAGCTGAGCATGATGAGCGACCACCTATGCAGCATGAACGAGACCCTGTCCAAACAGAGGGAGGAGATTGACACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 90 bp | CCATCTGGCTCTGTACTTGGCAAGGCGAGGAGAGTGACATACGTCTaGAGCTTCTCAAACACGGCTGTCATCGTCTTCATGTCCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSGSVLGKARRVTYV*SFSNTAVIVFMSWD Trigger: GTCCCAGGACATGAAGACGATGACAGCCGTGTTTGAGAAGCTGCAGACGTATGTCACTCTCCTCGCCTTGCCAAGTACAGAGCCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 90 bp | ACACGGCTGTCATCGTCTTCATGTCCTGGGACAGCTCCAGGTTCCTaGCTCTCAGTGCAGGTGTGCAGAGGGAAGATTCACACTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRLSSSSCPGTAPGS*LSVQVCRGKIHTLL Trigger: AAGAAGAGTGTGAATCTTCCCTCTGCACACCTGCACTGAGAGCCAGGAACCTGGAGCTGTCCCAGGACATGAAGACGATGACAGCCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CACCAGCACTGGCTGTGGAGTCTGGCTCGAGTCTCAGGGCAGAACAGTCACTGCTTCTCCAGCTTGATTTaGGCTAACTGTGCTTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: HQHWLWSLARVSGQNSHCFSSLI*ANCASS Trigger: GCTAGAAGCACAGTTAGCCAAAATCAAGCTGGAGAA...GCAGTGACTGTTCTGCCCTGAGACTCGAGCCAGACTCCACAGCCAGTGCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CACGGGTATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGTCTTGCCCGCTCCGTTaGTTAACGTCACCGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGYVYCFPSDCQHGALYLSCPLR*LTSPLR Trigger: CCTCAGCGGTGACGTTAACAAACGGAGCGGGCAAGA...CAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATACCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 90 bp | AAGGGGACTAATGAATCCGCTGGCTGTCTTGGGCCCATAGCTCAGTaGAGCAATGAAGTAGTCCACGTTGTTGCCGAAGAAAGACGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KGTNESAGCLGPIAQ*SNEVVHVVAEERRN Trigger: ATTGCGTCTTTCTTCGGCAACAACGTGGACTACTTCATTGCTTCACTGAGCTATGGGCCCAAGACAGCCAGCGGATTCATTAGTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 90 bp | GTCTCCAGGACAGTCACAGTATCCTCTGTAATGCTCTCGAATAAGTaGAGCATTCCTTCCTCAAGGGGGCGGACATACGATGCGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSRTVTVSSVMLSNK*SIPSSRGRTYDAFS Trigger: TGAAAACGCATCGTATGTCCGCCCCCTTGAGGAAGGAATGCTGCACTTATTCGAGAGCATTACAGAGGATACTGTGACTGTCCTGGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 90 bp | GAGATTTTACTTCTAGCTTTGCCTTGTCGCTCTGGAGTTTCTCAATaGTCTCCATGTACTTCCGGGTCAGGCCGTCGATCACAGCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EILLLALPCRSGVSQ*SPCTSGSGRRSQLG Trigger: ACCAAGCTGTGATCGACGGCCTGACCCGGAAGTACATGGAGACCATTGAGAAACTCCAGAGCGACAAGGCAAAGCTAGAAGTAAAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTAGGAGTTCCACCCTCTaGGCAAGCTGCAGATTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RKETYNVHGYVYCFPSDCRSSTL*ASCRFR Trigger: TCGAAATCTGCAGCTTGCCAAGAGGGTGGAACTCCT...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 90 bp | TCATGTCCTGGGACAGCTCCAGGTTCCTGGCTCTCAGTGCAGGTGTaGAGAGGGAAGATTCACACTCTTCTTCTAAACTTTTTAACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SCPGTAPGSWLSVQV*RGKIHTLLLNFLTD Trigger: ATCAGTTAAAAAGTTTAGAAGAAGAGTGTGAATCTTCCCTCTGCACACCTGCACTGAGAGCCAGGAACCTGGAGCTGTCCCAGGACATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTTTCCATCTGACTGTGACGCTCTTCTGCTCTaGGCTCAACTGAGAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKETYNVHGYVYCFPSDCDALLL*AQLRRR Trigger: TCTTCTTCTCAGTTGAGCCAAGAGCAGAAGAGCGTC...ACAGTCAGATGGAAAGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 90 bp | GAGGTTCACTTAGTGCTAGCTCATCTTGAAGGAGTTCCACCCTCTTaGCAAGCTGCAGATTTCGAAATGTCAAACTGTCCATTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EVHLVLAHLEGVPPS*QAADFEMSNCPFPA Trigger: AGCAGGAAATGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAGGGTGGAACTCCTTCAAGATGAGCTAGCACTAAGTGAACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 90 bp | TTCTTGTTTTTCTTGCCTCGAGGTTCACTTAGTGCTAGCTCATCTTaGAGGAGTTCCACCCTCTTGGCAAGCTGCAGATTTCGAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLFFLPRGSLSASSS*RSSTLLASCRFRNV Trigger: GACATTTCGAAATCTGCAGCTTGCCAAGAGGGTGGAACTCCTTCAAGATGAGCTAGCACTAAGTGAACCTCGAGGCAAGAAAAACAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 90 bp | TCTTCTGTTCGCAGTCGACATTCCTTGGCCTCCTTTTCTAGAGTCTaGGATTTTACTTCTAGCTTTGCCTTGTCGCTCTGGAGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVRSRHSLASFSRV*DFTSSFALSLWSFS Trigger: TGAGAAACTCCAGAGCGACAAGGCAAAGCTAGAAGTAAAATCTCAGACTCTAGAAAAGGAGGCCAAGGAATGTCGACTGCGAACAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 90 bp | CTCTTGGCAAGCTGCAGATTTCGAAATGTCAAACTGTCCATTTCCTaGTGCAGTTTCCTCAAGGACTGGTCCTTCATTTTCAGTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLASCRFRNVKLSIS*CSFLKDWSFIFSCS Trigger: GGAACAACTGAAAATGAAGGACCAGTCCTTGAGGAAACTGCAGCAGGAAATGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCACAGACAGGCAGCAGCCTTCTTCTaGTACTGCAGCATGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LYLLLFTNILQRSPGHRQAAAFF*YCSMHS Trigger: TGAGTGCATGCTGCAGTACAAGAAGAAGGCTGCTGC...CTGTCTGTGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | TGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCAAGACGGAAGTGTAGTTaGTTCGAAGGAGTCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGSVFASVHKYSSKVSRSRRKCS*FEGVHL Trigger: CAGATGGACTCCTTCGAACAAACTACACTTCCGTCT...TGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | TATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGGCTTCTGTGTTGCTGTaGGAATTTCATGCTCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: YVYCFPSDCQHGALYLLLASVLL*EFHALW Trigger: CCATAGAGCATGAAATTCCAACAGCAACACAGAAGC...CAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | TGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCACCTGTCTGCAATCCGTaGGTTTTCTTTCTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WGSVFASVHKYSSKVSRSPVCNP*VFFLQL Trigger: AAGCTGGAGAAAGAAAACCAACGGATTGCAGACAGG...TGACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CACAGTAAAAACAGCGTAAGGAAACCTACAATGTCCACGGGTATGTGTACTGCTATTTTACTTCTAGCTTaGCCTTGTCGCTCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSKNSVRKPTMSTGMCTAILLLA*PCRSGV Trigger: AACTCCAGAGCGACAAGGCAAAGCTAGAAGTAAAAT...AGCAGTACACATACCCGTGGACATTGTAGGTTTCCTTACGCTGTTTTTACTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CACGGGTATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGGTTTTCATGAAGGTATaGGGAGAACTTCTGATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HGYVYCFPSDCQHGALYLVFMKV*GELLIQ Trigger: TTGAATCAGAAGTTCTCCCAATACCTTCATGAAAAC...CAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATACCCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTGAGCAGCACCAACATTaGTTAAGACGGAAGTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HGALYLLLFTNILQRSPGEQHQH*LRRKCS Trigger: ACTACACTTCCGTCTTAACAAATGTTGGTGCTGCTC...ACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTGATTCACCACTTTTCTaGTTTTTCTTGCCTCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGALYLLLFTNILQRSPGDSPLF*FFLPRG Trigger: ACCTCGAGGCAAGAAAAACAAGAAAAGTGGTGAATC...ACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTCTCCTCGATTTTCTTTaGCAGGTCTTCATCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HGALYLLLFTNILQRSPGLLDFL*QVFIKD Trigger: GTCTTTGATGAAGACCTGCAAAAGAAAATCGAGGAG...ACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | CATGGGGCTCTGTATTTGCTTCTGTTCACAAATATTCTTCAAAGGTCTCCAGGTTTTTCAATTTCACAGTaGTCTCCAGGACAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: HGALYLLLFTNILQRSPGFSISQ*SPGQSQ Trigger: CTGTGACTGTCCTGGAGACAACTGTGAAATTGAAAA...ACCTGGAGACCTTTGAAGAATATTTGTGAACAGAAGCAAATACAGAGCCCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS-3UTR CAA 90 bp | TATGTGTACTGCTTTCCATCTGACTGTCAACATGGGGCTCTGTATTTGCTTCTGTTACTAGCTTCTGTGTaGCTGTTGGAATTTCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: YVYCFPSDCQHGALYLLLLLASV*LLEFHA Trigger: AGCATGAAATTCCAACAGCAACACAGAAGCTAGTAA...CAGAAGCAAATACAGAGCCCCATGTTGACAGTCAGATGGAAAGCAGTACACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | TCTCCTGGGCCAGCCCAGGCAGCTGGGCACTGGTGGTaGCCCGCAGCCTGTCTGCAATCCGTTGGTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SPGPAQAAGHWW*PAACLQSVGFL Trigger: AAGAAAACCAACGGATTGCAGACAGGCTGCGGGGCACCACCAGTGCCCAGCTGCCTGGGCTGGCCCAGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
||
| CDS CCA 72 bp | CATTCTCCTGGGCCAGCCCAGGCAGCTGGGCACTGGTaGTGCCCCGCAGCCTGTCTGCAATCCGTTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HSPGPAQAAGHW*CPAACLQSVGF Trigger: AAAACCAACGGATTGCAGACAGGCTGCGGGGCACCACCAGTGCCCAGCTGCCTGGGCTGGCCCAGGAGAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | GCCAGCCGACTCCTCAGCTCCGCTTCCACGTGCCTGTaGTGCTCGTCCGCTTCGAAGAACTGTATGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASRLLSSASTCL*CSSASKNCMCS Trigger: GCTGCACATACAGTTCTTCGAAGCGGACGAGCATCACAGGCACGTGGAAGCGGAGCTGAGGAGTCGGCTGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | GGCGTCCTGGTTAACATCCCAACCAGACTGGTGCTCTaGACAGGCTCTGTCAGGACCTTGGCTGCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GVLVNIPTRLVL*TGSVRTLAAAS Trigger: GGAGGCTGCAGCCAAGGTCCTGACAGAGCCTGTGCAGAGCACCAGTCTGGTTGGGATGTTAACCAGGACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 72 bp | TCACAGCTTGGTGCTGAGCAGCTTCTGTTTCAAGAGTaGCCAGCCGACTCCTCAGCTCCGCTTCCACGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SQLGAEQLLFQE*PADSSAPLPRA Trigger: GGCACGTGGAAGCGGAGCTGAGGAGTCGGCTGGCCACTCTTGAAACAGAAGCTGCTCAGCACCAAGCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | TACTTCCGGGTCAGGCCGTCGATCACAGCTTGGTGCTaGGCAGCTTCTGTTTCAAGAGTGGCCAGCCGACTC | + |
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Preference number: 6 (lower is better) Translates to: YFRVRPSITAWC*AASVSRVASRL Trigger: GAGTCGGCTGGCCACTCTTGAAACAGAAGCTGCTCAGCACCAAGCTGTGATCGACGGCCTGACCCGGAAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | TGTCTGGCGTCCTGGTTAACATCCCAACCAGACTGGTaGTCTGCACAGGCTCTGTCAGGACCTTGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CLASWLTSQPDW*SAQALSGPWLQ Trigger: CTGCAGCCAAGGTCCTGACAGAGCCTGTGCAGAGCACCAGTCTGGTTGGGATGTTAACCAGGACGCCAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 72 bp | GCCAGGGCCTGCCCAGCTATATCTCGCATCTTCAGCTaGTGTCGCCTATTGTGCAGGGGAACATTGAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: ARACPAISRIFS*CRLLCRGTLRA Trigger: CGCTCTCAATGTTCCCCTGCACAATAGGCGACACCAGCTGAAGATGCGAGATATAGCTGGGCAGGCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 72 bp | CACTGTCTGGCGTCCTGGTTAACATCCCAACCAGACTaGTGCTCTGCACAGGCTCTGTCAGGACCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: HCLASWLTSQPD*CSAQALSGPWL Trigger: CAGCCAAGGTCCTGACAGAGCCTGTGCAGAGCACCAGTCTGGTTGGGATGTTAACCAGGACGCCAGACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 72 bp | GGGACTCAACATCCGGAGCCTCACTGTCTGGCGTCCTaGTTAACATCCCAACCAGACTGGTGCTCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: GTQHPEPHCLAS*LTSQPDWCSAQ Trigger: CTGTGCAGAGCACCAGTCTGGTTGGGATGTTAACCAGGACGCCAGACAGTGAGGCTCCGGATGTTGAGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 90 bp | CTCAATGGTCTCCATGTACTTCCGGGTCAGGCCGTCGATCACAGCTaGGTGCTGAGCAGCTTCTGTTTCAAGAGTGGCCAGCCGACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LNGLHVLPGQAVDHS*VLSSFCFKSGQPTP Trigger: AGGAGTCGGCTGGCCACTCTTGAAACAGAAGCTGCTCAGCACCAAGCTGTGATCGACGGCCTGACCCGGAAGTACATGGAGACCATTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | CTTAGAGAGCGCACGGCACTCGGCGTAGAAGTGCACTaGCTTACTGTCAGCCAGCTGCAGCTGAGATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LRERTALGVEVH*LTVSQLQLRCE Trigger: CTCACATCTCAGCTGCAGCTGGCTGACAGTAAGTCAGTGCACTTCTACGCCGAGTGCCGTGCGCTCTCTAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | GGGTCTCGTTCATGCTGCATAGGTGGTCGCTCATCATaGTCAGCTGATCCTCGTAGCTCCGCTTGGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: GSRSCCIGGRSS*SADPRSSAWWS Trigger: TGACCACCAAGCGGAGCTACGAGGATCAGCTGAGCATGATGAGCGACCACCTATGCAGCATGAACGAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 72 bp | CTCCATGTACTTCCGGGTCAGGCCGTCGATCACAGCTaGGTGCTGAGCAGCTTCTGTTTCAAGAGTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LHVLPGQAVDHS*VLSSFCFKSGQ Trigger: CTGGCCACTCTTGAAACAGAAGCTGCTCAGCACCAAGCTGTGATCGACGGCCTGACCCGGAAGTACATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | TCCGCTTGGTGGTCATCAGCTCGTCCTGAAGCCTGCTaGTGTTCTGACTGGCTAGCCTCATCTCCTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SAWWSSARPEAC*CSDWLASSPLS Trigger: TGACAGAGGAGATGAGGCTAGCCAGTCAGAACATCAGCAGGCTTCAGGACGAGCTGATGACCACCAAGCGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | CATGTCCTGGGACAGCTCCAGGTTCCTGGCTCTCAGTaGAGGTGTGCAGAGGGAAGATTCACACTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HVLGQLQVPGSQ*RCAEGRFTLFF Trigger: GAAGAAGAGTGTGAATCTTCCCTCTGCACACCTGCACTGAGAGCCAGGAACCTGGAGCTGTCCCAGGACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 72 bp | AGCTTCTCAAACACGGCTGTCATCGTCTTCATGTCCTaGGACAGCTCCAGGTTCCTGGCTCTCAGTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SFSNTAVIVFMS*DSSRFLALSAG Trigger: ACCTGCACTGAGAGCCAGGAACCTGGAGCTGTCCCAGGACATGAAGACGATGACAGCCGTGTTTGAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | GTCCATCTGGCTCTGTACTTGGCAAGGCGAGGAGAGTaGCATACGTCTGCAGCTTCTCAAACACGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: VHLALYLARRGE*HTSAASQTRLS Trigger: TGACAGCCGTGTTTGAGAAGCTGCAGACGTATGTCACTCTCCTCGCCTTGCCAAGTACAGAGCCAGATGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | TCTCCTCCCTCTGTTTGGACAGGGTCTCGTTCATGCTaGATAGGTGGTCGCTCATCATGCTCAGCTGATCCT | + |
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Preference number: 6 (lower is better) Translates to: SPPSVWTGSRSC*IGGRSSCSADP Trigger: AGGATCAGCTGAGCATGATGAGCGACCACCTATGCAGCATGAACGAGACCCTGTCCAAACAGAGGGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | CGCTGGCTGTCTTGGGCCCATAGCTCAGTGAAGCAATaGAGTAGTCCACGTTGTTGCCGAAGAAAGACGCAA | + |
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Preference number: 6 (lower is better) Translates to: RWLSWAHSSVKQ*SSPRCCRRKTQ Trigger: TTGCGTCTTTCTTCGGCAACAACGTGGACTACTTCATTGCTTCACTGAGCTATGGGCCCAAGACAGCCAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | CAATCTCCTCCCTCTGTTTGGACAGGGTCTCGTTCATaGTGCATAGGTGGTCGCTCATCATGCTCAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: QSPPSVWTGSRS*CIGGRSSCSAD Trigger: ATCAGCTGAGCATGATGAGCGACCACCTATGCAGCATGAACGAGACCCTGTCCAAACAGAGGGAGGAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 72 bp | CTTCTAGCTTTGCCTTGTCGCTCTGGAGTTTCTCAATaGTCTCCATGTACTTCCGGGTCAGGCCGTCGATCA | + |
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Preference number: 6 (lower is better) Translates to: LLALPCRSGVSQ*SPCTSGSGRRS Trigger: TGATCGACGGCCTGACCCGGAAGTACATGGAGACCATTGAGAAACTCCAGAGCGACAAGGCAAAGCTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 72 bp | TGTTGCCGAAGAAAGACGCAATCTTGCCCGCTCCGTTaGTTAACGTCACCGCTGAGGACAAGATGCAGTCGT | + |
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Preference number: 6 (lower is better) Translates to: CCRRKTQSCPLR*LTSPLRTRCSR Trigger: ACGACTGCATCTTGTCCTCAGCGGTGACGTTAACAAACGGAGCGGGCAAGATTGCGTCTTTCTTCGGCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 90 bp | CATTTCCTGCTGCAGTTTCCTCAAGGACTGGTCCTTCATTTTCAGTaGTTCCTTCAGAGCAGCAGAGCTGGCCTGCTCATCCACAACACC | + |
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Preference number: 6 (lower is better) Translates to: HFLLQFPQGLVLHFQ*FLQSSRAGLLIHNT Trigger: GGTGTTGTGGATGAGCAGGCCAGCTCTGCTGCTCTGAAGGAACAACTGAAAATGAAGGACCAGTCCTTGAGGAAACTGCAGCAGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | GGGACAGCTCCAGGTTCCTGGCTCTCAGTGCAGGTGTaGAGAGGGAAGATTCACACTCTTCTTCTAAACTTT | + |
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Preference number: 6 (lower is better) Translates to: GTAPGSWLSVQV*RGKIHTLLLNF Trigger: AAAGTTTAGAAGAAGAGTGTGAATCTTCCCTCTGCACACCTGCACTGAGAGCCAGGAACCTGGAGCTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | TCTGTACTTGGCAAGGCGAGGAGAGTGACATACGTCTaGAGCTTCTCAAACACGGCTGTCATCGTCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: SVLGKARRVTYV*SFSNTAVIVFM Trigger: CATGAAGACGATGACAGCCGTGTTTGAGAAGCTGCAGACGTATGTCACTCTCCTCGCCTTGCCAAGTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 72 bp | TTCCGGGTCTTCTTAGAATTCCCCTTACTGGCCATCTaGAGCGTGTCAATCTCCTCCCTCTGTTTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: FRVFLEFPLLAI*SVSISSLCLDR Trigger: CCTGTCCAAACAGAGGGAGGAGATTGACACGCTCAAGATGGCCAGTAAGGGGAATTCTAAGAAGACCCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | AATGAATCCGCTGGCTGTCTTGGGCCCATAGCTCAGTaGAGCAATGAAGTAGTCCACGTTGTTGCCGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: NESAGCLGPIAQ*SNEVVHVVAEE Trigger: TTCTTCGGCAACAACGTGGACTACTTCATTGCTTCACTGAGCTATGGGCCCAAGACAGCCAGCGGATTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 90 bp | ATCCATGCAGAGCAGCACCAACATTTGTTAAGACGGAAGTGTAGTTaGTTCGAAGGAGTCCATCTGGCTCTGTACTTGGCAAGGCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: IHAEQHQHLLRRKCS*FEGVHLALYLARRG Trigger: TCCTCGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGAACAAACTACACTTCCGTCTTAACAAATGTTGGTGCTGCTCTGCATGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | CGCAGTCGACATTCCTTGGCCTCCTTTTCTAGAGTCTaGGATTTTACTTCTAGCTTTGCCTTGTCGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSRHSLASFSRV*DFTSSFALSLW Trigger: CCAGAGCGACAAGGCAAAGCTAGAAGTAAAATCTCAGACTCTAGAAAAGGAGGCCAAGGAATGTCGACTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | GTGCAGCATTCCTTCCTCAAGGGGGCGGACATACGATaGGTTTTCATGAAGGTATTGGGAGAACTTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: VQHSFLKGADIR*VFMKVLGELLI Trigger: AATCAGAAGTTCTCCCAATACCTTCATGAAAACGCATCGTATGTCCGCCCCCTTGAGGAAGGAATGCTGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS GCA 72 bp | ACAGTCACAGTATCCTCTGTAATGCTCTCGAATAAGTaGAGCATTCCTTCCTCAAGGGGGCGGACATACGAT | + |
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Preference number: 6 (lower is better) Translates to: TVTVSSVMLSNK*SIPSSRGRTYD Trigger: ATCGTATGTCCGCCCCCTTGAGGAAGGAATGCTGCACTTATTCGAGAGCATTACAGAGGATACTGTGACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 90 bp | CGCAGCCTGTCTGCAATCCGTTGGTTTTCTTTCTCCAGCTTGATTTaGGCTAACTGTGCTTCTAGCATCCAATGTTCTTTCTCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RSLSAIRWFSFSSLI*ANCASSIQCSFSCS Trigger: GGAGCAGGAGAAAGAACATTGGATGCTAGAAGCACAGTTAGCCAAAATCAAGCTGGAGAAAGAAAACCAACGGATTGCAGACAGGCTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 72 bp | CTGTATGTGCAGCCGTTCGTTCTCCTCGATTTTCTTTaGCAGGTCTTCATCAAAGACGCTCTTCTGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LYVQPFVLLDFL*QVFIKDALLLL Trigger: CAAGAGCAGAAGAGCGTCTTTGATGAAGACCTGCAAAAGAAAATCGAGGAGAACGAACGGCTGCACATACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 72 bp | GAGCAGCACCAACATTTGTTAAGACGGAAGTGTAGTTaGTTCGAAGGAGTCCATCTGGCTCTGTACTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: EQHQHLLRRKCS*FEGVHLALYLA Trigger: TGCCAAGTACAGAGCCAGATGGACTCCTTCGAACAAACTACACTTCCGTCTTAACAAATGTTGGTGCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CCA 72 bp | TTAGTGCTAGCTCATCTTGAAGGAGTTCCACCCTCTTaGCAAGCTGCAGATTTCGAAATGTCAAACTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LVLAHLEGVPPS*QAADFEMSNCP Trigger: TGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAGGGTGGAACTCCTTCAAGATGAGCTAGCACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 72 bp | CTTTTGCAGGTCTTCATCAAAGACGCTCTTCTGCTCTaGGCTCAACTGAGAAGAAGATTCACCACTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLQVFIKDALLL*AQLRRRFTTFL Trigger: AAGAAAAGTGGTGAATCTTCTTCTCAGTTGAGCCAAGAGCAGAAGAGCGTCTTTGATGAAGACCTGCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS CAA 72 bp | TCTGCAATCCGTTGGTTTTCTTTCTCCAGCTTGATTTaGGCTAACTGTGCTTCTAGCATCCAATGTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SAIRWFSFSSLI*ANCASSIQCSF Trigger: GAAAGAACATTGGATGCTAGAAGCACAGTTAGCCAAAATCAAGCTGGAGAAAGAAAACCAACGGATTGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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| CDS TCA 72 bp | TTCATGAAGGTATTGGGAGAACTTCTGATTCAATGGTaGTATAGTGTCTATGGCAGAATCAACAGGGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: FMKVLGELLIQW*YSVYGRINREN Trigger: ATTTTCCCTGTTGATTCTGCCATAGACACTATATCACCATTGAATCAGAAGTTCTCCCAATACCTTCATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038551.8 |
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