Pregenerated sensors for PPP1R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047714Ensembl transcript IDs: ENSMUST00000060188.14
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCCCTCCAATTACTCTCAGGCCTACTTTGAGACAGGGTCTCACTaGTTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGGGATCTAGCG | + |
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Preference number: 1 (lower is better) Translates to: FPSNYSQAYFETGSH*FSKAGWPARSRDLA Trigger: CGCTAGATCCCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAGTGAGACCCTGTCTCAAAGTAGGCCTGAGAGTAATTGGAGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 90 bp | TGTGGTTTTCTGGGTACTAGGATTCCACACTCAGGCCCTCATGCTTaGATAGCAAGCACTCAACTGAGAGAGCCATCTTCCCAATGCCCT | + |
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Preference number: 1 (lower is better) Translates to: CGFLGTRIPHSGPHA*IASTQLREPSSQCP Trigger: AGGGCATTGGGAAGATGGCTCTCTCAGTTGAGTGCTTGCTATGCAAGCATGAGGGCCTGAGTGTGGAATCCTAGTACCCAGAAAACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 90 bp | CACACACACACACACACACACACACACACCAGCAGACAGACTTCATaGCATGGAGTACATGTAGAGTTGGTTCCCTCCTCCCACCATGTT | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTSRQTS*HGVHVELVPSSHHV Trigger: AACATGGTGGGAGGAGGGAACCAACTCTACATGTACTCCATGGCATGAAGTCTGTCTGCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR CCA 90 bp | ACACACACACACACACACACACACCAGCAGACAGACTTCATGCCATaGAGTACATGTAGAGTTGGTTCCCTCCTCCCACCATGTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHQQTDFMP*STCRVGSLLPPCFW Trigger: CCAGAAACATGGTGGGAGGAGGGAACCAACTCTACATGTACTCCATGGCATGAAGTCTGTCTGCTGGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR TCA 90 bp | GTCCAGGGATCTAGCGGTCTCTACCTCTCTAATTACAGACATGTATaGCCATATGTGGTTTTCTGGGTACTAGGATTCCACACTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: VQGSSGLYLSNYRHV*PYVVFWVLGFHTQA Trigger: GGCCTGAGTGTGGAATCCTAGTACCCAGAAAACCACATATGGTCATACATGTCTGTAATTAGAGAGGTAGAGACCGCTAGATCCCTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 90 bp | CCTGAAGCTTGCATAGCGCACGAAGACAAGCAGAGCAGGTGTCAGTaGAACTTTAACCTGGACATTTATTTGTGTATTTATTTGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PEACIAHEDKQSRCQ*NFNLDIYLCIYLGW Trigger: CCACCCCAAATAAATACACAAATAAATGTCCAGGTTAAAGTTGCACTGACACCTGCTCTGCTTGTCTTCGTGCGCTATGCAAGCTTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 90 bp | CATGCTTGCATAGCAAGCACTCAACTGAGAGAGCCATCTTCCCAATaGCCTGGAGGAAATACTTTTTATTTAGTTGCATTTGACTACCTA | + |
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Preference number: 1 (lower is better) Translates to: HACIASTQLREPSSQ*PGGNTFYLVAFDYL Trigger: TAGGTAGTCAAATGCAACTAAATAAAAAGTATTTCCTCCAGGGCATTGGGAAGATGGCTCTCTCAGTTGAGTGCTTGCTATGCAAGCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR GCA 90 bp | CTGATTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGGGATCTAGCGGTCTCTACCAGAGCAGGTGTCAGTaGAACTTTAACCTGGACATT | + |
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Preference number: 2 (lower is better) Translates to: LIQQGWLASTVQGSSGLYQSRCQ*NFNLDI Trigger: AATGTCCAGGTTAAAGTTGCACTGACACCTGCTCTG...GTAGAGACCGCTAGATCCCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR GCA 90 bp | CTGATTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGGGATCTAGCGGTCTCTACGATCTGTTTCCTTCATaGATTAGAACTAGCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LIQQGWLASTVQGSSGLYDLFPS*IRTSRC Trigger: GCACCTGCTAGTTCTAATGCATGAAGGAAACAGATC...GTAGAGACCGCTAGATCCCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR GCA 90 bp | GATTCCACACTCAGGCCCTCATGCTTGCATAGCAAGCACTCAACTGAGAGAGCCCTCTTCCAGAGGACCTaGGTTCAACTCCTATTACCC | + |
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Preference number: 2 (lower is better) Translates to: DSTLRPSCLHSKHSTERALFQRT*VQLLLP Trigger: GGGTAATAGGAGTTGAACGCAGGTCCTCTGGAAGAG...GGCTCTCTCAGTTGAGTGCTTGCTATGCAAGCATGAGGGCCTGAGTGTGGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR GCA 90 bp | CTGATTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGGGATCTAGCGGTCTCTACGTTTGGTTAGAATACTaGACTAACATTCAGAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: LIQQGWLASTVQGSSGLYVWLEY*TNIQSY Trigger: GTAGCTCTGAATGTTAGTGCAGTATTCTAACCAAAC...GTAGAGACCGCTAGATCCCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCCCTCCAATTACTCTCAGGCCTACTTTGAGACAGGGTCTCACTGATTCAGGAACCGTGTCCATCTaGCACAGTGTGCATTATCGT | + |
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Preference number: 2 (lower is better) Translates to: VSPPITLRPTLRQGLTDSGTVSI*HSVHYR Trigger: ACGATAATGCACACTGTGGCAGATGGACACGGTTCC...TGAATCAGTGAGACCCTGTCTCAAAGTAGGCCTGAGAGTAATTGGAGGGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCAGTGGTGGCCCACATCTTTAATCTCAATACTTGGATCTCAAGAGTTCTTTGCATACAAGCAGTaGACAGACACACACTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: DRQWWPTSLISILGSQEFFAYKQ*TDTHCR Trigger: CCTACAGTGTGTGTCTGTTCACTGCTTGTATGCAAA...GAACTCTTGAGATCCAAGTATTGAGATTAAAGATGTGGGCCACCACTGCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR CCA 90 bp | GACAGGCAGTGGTGGCCCACATCTTTAATCTCAATACTTGGATCTCAAGAGTTCTATTTGGGGTGGGAATaGGGGAAACCAGTTTGGATA | + |
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Preference number: 2 (lower is better) Translates to: DRQWWPTSLISILGSQEFYLGWE*GKPVWI Trigger: TATCCAAACTGGTTTCCCCCATTCCCACCCCAAATA...GAACTCTTGAGATCCAAGTATTGAGATTAAAGATGTGGGCCACCACTGCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCCCTCCAATTACTCTCAGGCCTACTTTGAGACAGGGTCTCACTGATTCAATGGTCACCTTCCTTTaGTTTCCACAGGTTTTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VSPPITLRPTLRQGLTDSMVTFL*FPQVLH Trigger: ATGCAAAACCTGTGGAAACCAAAGGAAGGTGACCAT...TGAATCAGTGAGACCCTGTCTCAAAGTAGGCCTGAGAGTAATTGGAGGGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGCTCTTACATTATCATTCCATTTACACTAAGGTGGCCCATGCTTTAAATCTGATTCAGCAAGGCTaGCTGGCCAGCACGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KLLLHYHSIYTKVAHALNLIQQG*LASTVQ Trigger: CTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAG...ATTTAAAGCATGGGCCACCTTAGTGTAAATGGAATGATAATGTAAGAGCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGCCATCTTCCCAATGCCCTGGAGGAAATACTTTTTATTTAGTTGCATTACCTTGCCTGAAGCTTaGATAGCGCACGAAGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERAIFPMPWRKYFLFSCITLPEA*IAHEDK Trigger: CTTGTCTTCGTGCGCTATGCAAGCTTCAGGCAAGGT...AATGCAACTAAATAAAAAGTATTTCCTCCAGGGCATTGGGAAGATGGCTCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR CAA 90 bp | GACAAGCAGAGCAGGTGTCAGTGCAACTTTAACCTGGACATTTATTaGTGTATTTATTTGGGGTGGGAATGGGGGAAACCAGTTTGGATA | + |
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Preference number: 2 (lower is better) Translates to: DKQSRCQCNFNLDIY*CIYLGWEWGKPVWI Trigger: TATCCAAACTGGTTTCCCCCATTCCCACCCCAAATAAATACACAAATAAATGTCCAGGTTAAAGTTGCACTGACACCTGCTCTGCTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR TCA 90 bp | AAGTTGCTCTTACATTATCATTCCATTTACACTAAGGTGGCCCATGCTTTAAATGGATGGCTCAGCATGTaGAAGCTCTGGCTGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KLLLHYHSIYTKVAHALNGWLSM*KLWLLF Trigger: GAAGAGCAGCCAGAGCTTTCACATGCTGAGCCATCC...ATTTAAAGCATGGGCCACCTTAGTGTAAATGGAATGATAATGTAAGAGCAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGCTCTTACATTATCATTCCATTTACACTAAGGTGGCCCATGCTTTAAATAATCAGAGGAGGGGCTaGAGGGATGGCTCAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: KLLLHYHSIYTKVAHALNNQRRG*RDGSAC Trigger: ACATGCTGAGCCATCCCTCCAGCCCCTCCTCTGATT...ATTTAAAGCATGGGCCACCTTAGTGTAAATGGAATGATAATGTAAGAGCAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR CAA 90 bp | TCCACATCCCACAAACAGGCTTACTTTACAAAGATGAGGTATACATaGCTTAGTGTGTACATGAGCGGTTCACTGGCTAAAACGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: STSHKQAYFTKMRYT*LSVYMSGSLAKTFG Trigger: ACCAAACGTTTTAGCCAGTGAACCGCTCATGTACACACTAAGCAATGTATACCTCATCTTTGTAAAGTAAGCCTGTTTGTGGGATGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCAGTGGTGGCCCACATCTTTAATCTCAATACTTGGATCTCAAGAGTTCAATTACAGACATGTATaGCCATATGTGGTTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: DRQWWPTSLISILGSQEFNYRHV*PYVVFW Trigger: CCAGAAAACCACATATGGTCATACATGTCTGTAATT...GAACTCTTGAGATCCAAGTATTGAGATTAAAGATGTGGGCCACCACTGCCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGCCATCTTCCCAATGCCCTGGAGGAAATACTTTTTATTTAGTTGCATTGGTTTCCACAGGTTTTaGATACAAGCAGTGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: ERAIFPMPWRKYFLFSCIGFHRF*IQAVNR Trigger: TCTGTTCACTGCTTGTATGCAAAACCTGTGGAAACC...AATGCAACTAAATAAAAAGTATTTCCTCCAGGGCATTGGGAAGATGGCTCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGCTACCAAAAACTTACGATACAAATAAACAACTACAAAGGGAACCATCACACTACTGCAGCAGATaGCAGAATATGCAAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LVLPKTYDTNKQLQREPSHYCSR*QNMQEE Trigger: CTCTTCTTGCATATTCTGTCATCTGCTGCAGTAGTG...TGATGGTTCCCTTTGTAGTTGTTTATTTGTATCGTAAGTTTTTGGTAGCACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGCTACCAAAAACTTACGATACAAATAAACAACTACAAAGGGAACCATCAGCAGATGACAGAATATaGAAGAAGAGTTCCTCACGT | + |
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Preference number: 2 (lower is better) Translates to: LVLPKTYDTNKQLQREPSADDRI*KKSSSR Trigger: ACGTGAGGAACTCTTCTTGCATATTCTGTCATCTGC...TGATGGTTCCCTTTGTAGTTGTTTATTTGTATCGTAAGTTTTTGGTAGCACCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGCTCTTACATTATCATTCCATTTACACTAAGGTGGCCCATGCTTTAAATTGTATTTATTTGGGGTaGGAATGGGGGAAACCAGTT | + |
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Preference number: 2 (lower is better) Translates to: KLLLHYHSIYTKVAHALNCIYLG*EWGKPV Trigger: AACTGGTTTCCCCCATTCCCACCCCAAATAAATACA...ATTTAAAGCATGGGCCACCTTAGTGTAAATGGAATGATAATGTAAGAGCAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR TCA 72 bp | AATTACTCTCAGGCCTACTTTGAGACAGGGTCTCACTaGTTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: NYSQAYFETGSH*FSKAGWPARSR Trigger: CCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAGTGAGACCCTGTCTCAAAGTAGGCCTGAGAGTAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 72 bp | CTGGGTACTAGGATTCCACACTCAGGCCCTCATGCTTaGATAGCAAGCACTCAACTGAGAGAGCCATCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LGTRIPHSGPHA*IASTQLREPSS Trigger: GGAAGATGGCTCTCTCAGTTGAGTGCTTGCTATGCAAGCATGAGGGCCTGAGTGTGGAATCCTAGTACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR CAA 90 bp | CTGATTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGGGATCTAGCGGTCTCTACAAGATGAGGTATACATaGCTTAGTGTGTACATGAGC | + |
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Preference number: 3 (lower is better) Translates to: LIQQGWLASTVQGSSGLYKMRYT*LSVYMS Trigger: GCTCATGTACACACTAAGCAATGTATACCTCATCTT...GTAGAGACCGCTAGATCCCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR CAA 90 bp | CTGATTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGGGATCTAGCGGTCTCTACAACCTGGACATTTATTaGTGTATTTATTTGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LIQQGWLASTVQGSSGLYNLDIY*CIYLGW Trigger: CCACCCCAAATAAATACACAAATAAATGTCCAGGTT...GTAGAGACCGCTAGATCCCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR TCA 72 bp | ATGCTGTTTCCCCTCCAATTACTCTCAGGCCTACTTTaGGACAGGGTCTCACTGATTCAGCAAGGCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: MLFPLQLLSGLL*DRVSLIQQGWL Trigger: CAGCCAGCCTTGCTGAATCAGTGAGACCCTGTCTCAAAGTAGGCCTGAGAGTAATTGGAGGGGAAACAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 72 bp | ACACACACACACACACACACCAGCAGACAGACTTCATaGCATGGAGTACATGTAGAGTTGGTTCCCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: THTHTHTSRQTS*HGVHVELVPSS Trigger: GGAGGAGGGAACCAACTCTACATGTACTCCATGGCATGAAGTCTGTCTGCTGGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 72 bp | AGAAGGACAGCGATCAAGCTGCTAAGCAGTCCTTCCTaGCACAGTATGGCCACTACTAGATCTGTTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: RRTAIKLLSSPS*HSMATTRSVSF Trigger: GAAGGAAACAGATCTAGTAGTGGCCATACTGTGGCAGGAAGGACTGCTTAGCAGCTTGATCGCTGTCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 72 bp | CTCTGTCTTCATGCTCTTGGGGAGTCCACAGAAGCATaGTGTTTCCCCTCCAATTACTCTCAGGCCTACTTT | + |
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Preference number: 3 (lower is better) Translates to: LCLHALGESTEA*CFPSNYSQAYF Trigger: AAAGTAGGCCTGAGAGTAATTGGAGGGGAAACAGCATGCTTCTGTGGACTCCCCAAGAGCATGAAGACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 72 bp | ATCATGTTAGAGGAACCGTGTCCATCTGCCACAGTGTaGATTATCGTAGTCCCTTTAAAGCAGACTCCGCAG | + |
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Preference number: 3 (lower is better) Translates to: IMLEEPCPSATV*IIVVPLKQTPQ Trigger: CTGCGGAGTCTGCTTTAAAGGGACTACGATAATGCACACTGTGGCAGATGGACACGGTTCCTCTAACATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR TCA 72 bp | AGCAGGTGCCAAGTGAGAATTCACTACTGCAGCAGATaGCAGAATATGCAAGAAGAGTTCCTCACGTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SRCQVRIHYCSR*QNMQEEFLTSN Trigger: ATTGGACGTGAGGAACTCTTCTTGCATATTCTGTCATCTGCTGCAGTAGTGAATTCTCACTTGGCACCTGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR-3UTR CAA 90 bp | AAGTTGCTCTTACATTATCATTCCATTTACACTAAGGTGGCCCATGCTTTAAATGGAGTACATGTAGAGTaGGTTCCCTCCTCCCACCAT | + |
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Preference number: 3 (lower is better) Translates to: KLLLHYHSIYTKVAHALNGVHVE*VPSSHH Trigger: ATGGTGGGAGGAGGGAACCAACTCTACATGTACTCC...ATTTAAAGCATGGGCCACCTTAGTGTAAATGGAATGATAATGTAAGAGCAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR GCA 72 bp | ATAGCAAGCACTCAACTGAGAGAGCCATCTTCCCAATaGCCTGGAGGAAATACTTTTTATTTAGTTGCATTT | + |
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Preference number: 3 (lower is better) Translates to: IASTQLREPSSQ*PGGNTFYLVAF Trigger: AAATGCAACTAAATAAAAAGTATTTCCTCCAGGGCATTGGGAAGATGGCTCTCTCAGTTGAGTGCTTGCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| CDS-3UTR GCA 90 bp | CTGATTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGGGATCTAGCGGTCTCTACCATGCTGTCTCCATCTaGAGTCTCTGCCATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LIQQGWLASTVQGSSGLYHAVSI*SLCHFF Trigger: GAAGAAATGGCAGAGACTGCAGATGGAGACAGCATG...GTAGAGACCGCTAGATCCCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| CDS-3UTR TCA 90 bp | CTGATTCAGCAAGGCTGGCTGGCCAGCACGGTCCAGGGATCTAGCGGTCTCTACAGTAGATCCTTGACTTaGCTCTTCAACATTCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LIQQGWLASTVQGSSGLYSRSLT*LFNIHA Trigger: AGCATGAATGTTGAAGAGTCAAGTCAAGGATCTACT...GTAGAGACCGCTAGATCCCTGGACCGTGCTGGCCAGCCAGCCTTGCTGAATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR CAA 72 bp | CATGCTGTTTCCCCTCCAATTACTCTCAGGCCTACTTaGAGACAGGGTCTCACTGATTCAGCAAGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: HAVSPPITLRPT*RQGLTDSARLA Trigger: AGCCAGCCTTGCTGAATCAGTGAGACCCTGTCTCAAAGTAGGCCTGAGAGTAATTGGAGGGGAAACAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR CAA 72 bp | CATCTGATGGTCACCTTCCTTTGGTTTCCACAGGTTTaGCATACAAGCAGTGAACAGACACACACTGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: HLMVTFLWFPQV*HTSSEQTHTVG Trigger: GCCTACAGTGTGTGTCTGTTCACTGCTTGTATGCAAAACCTGTGGAAACCAAAGGAAGGTGACCATCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| CDS-3UTR GCA 90 bp | GACAGGCAGTGGTGGCCCACATCTTTAATCTCAATACTTGGATCTCAAGAGTTCTCTCCACTACTTTCTTaGTCCCGAGTCCGATACTTT | + |
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Preference number: 4 (lower is better) Translates to: DRQWWPTSLISILGSQEFSPLLS*SRVRYF Trigger: AAAGTATCGGACTCGGGAGCAAGAAAGTAGTGGAGA...GAACTCTTGAGATCCAAGTATTGAGATTAAAGATGTGGGCCACCACTGCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| CDS-3UTR CCA 90 bp | GACAGGCAGTGGTGGCCCACATCTTTAATCTCAATACTTGGATCTCAAGAGTTCGTGATATGGGGTGTTTaGCTCGTCTATTTTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: DRQWWPTSLISILGSQEFVIWGV*LVYFHQ Trigger: TTGATGAAAATAGACGAGCCAAACACCCCATATCAC...GAACTCTTGAGATCCAAGTATTGAGATTAAAGATGTGGGCCACCACTGCCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR CAA 72 bp | AGCAGGTGTCAGTGCAACTTTAACCTGGACATTTATTaGTGTATTTATTTGGGGTGGGAATGGGGGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: SRCQCNFNLDIY*CIYLGWEWGKP Trigger: TGGTTTCCCCCATTCCCACCCCAAATAAATACACAAATAAATGTCCAGGTTAAAGTTGCACTGACACCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| 3UTR CAA 72 bp | CACAAACAGGCTTACTTTACAAAGATGAGGTATACATaGCTTAGTGTGTACATGAGCGGTTCACTGGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: HKQAYFTKMRYT*LSVYMSGSLAK Trigger: TTTAGCCAGTGAACCGCTCATGTACACACTAAGCAATGTATACCTCATCTTTGTAAAGTAAGCCTGTTTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| CDS-3UTR TCA 90 bp | TTGGTGCTACCAAAAACTTACGATACAAATAAACAACTACAAAGGGAACCATCATCTTTGTCAGCGGGATaGTATGTTGCCAGGATATTC | + |
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Preference number: 4 (lower is better) Translates to: LVLPKTYDTNKQLQREPSSLSAG*YVARIF Trigger: GAATATCCTGGCAACATATCATCCCGCTGACAAAGA...TGATGGTTCCCTTTGTAGTTGTTTATTTGTATCGTAAGTTTTTGGTAGCACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| CDS-3UTR TCA 90 bp | TTGGTGCTACCAAAAACTTACGATACAAATAAACAACTACAAAGGGAACCATCATCACCTATCATATTGTaGTATGGGGTGTTTGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LVLPKTYDTNKQLQREPSSPIIL*YGVFGS Trigger: CGAGCCAAACACCCCATATCACAATATGATAGGTGA...TGATGGTTCCCTTTGTAGTTGTTTATTTGTATCGTAAGTTTTTGGTAGCACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| CDS-3UTR GCA 90 bp | AAGTTGCTCTTACATTATCATTCCATTTACACTAAGGTGGCCCATGCTTTAAATCTTTGTGATTTGTGTTaGAGATGGTCACTTGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: KLLLHYHSIYTKVAHALNLCDLC*RWSLVV Trigger: TACTACAAGTGACCATCTGCAACACAAATCACAAAG...ATTTAAAGCATGGGCCACCTTAGTGTAAATGGAATGATAATGTAAGAGCAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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| CDS-3UTR CAA 90 bp | AAGTTGCTCTTACATTATCATTCCATTTACACTAAGGTGGCCCATGCTTTAAATTATGAACTTTGTGATTaGTGTTGCAGATGGTCACTT | + |
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Preference number: 5 (lower is better) Translates to: KLLLHYHSIYTKVAHALNYELCD*CCRWSL Trigger: AAGTGACCATCTGCAACACAAATCACAAAGTTCATA...ATTTAAAGCATGGGCCACCTTAGTGTAAATGGAATGATAATGTAAGAGCAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060188.14 |
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