Pregenerated sensors for PPP1R1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034683Ensembl transcript IDs: ENSMUST00000040863.11, ENSMUST00000090760.9, ENSMUST00000111780.3
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGAGACAGAAGAGGATGCTGGAGGCGGAGCTTTGGAGTACCAATaGATATTCAGAAGAGTACACAGTCCAGTTATTTCCAAGAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GETEEDAGGGALEYQ*IFRRVHSPVISKKP Trigger: GGGCTTCTTGGAAATAACTGGACTGTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTCTTCTGTCTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| 3UTR TCA 90 bp | ATATGTGTGTATACATCTTTGACTCATGACTTAGTTTTATTCTGTTaGCTGTGGTCTAGTCACACAAGACAATCCCTTTTCTCTTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: ICVYTSLTHDLVLFC*LWSSHTRQSLFSSD Trigger: ATCAGAAGAGAAAAGGGATTGTCTTGTGTGACTAGACCACAGTCAACAGAATAAAACTAAGTCATGAGTCAAAGATGTATACACACATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| 3UTR-3UTR CCA 90 bp | AGACAACAGATGTCTGCCTATCACTGTCTCCTTGAGGTAAACTGGGGTCTGATGGGAGGACTTAAGCTTTaGCAGTATCAAAGTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RQQMSAYHCLLEVNWGLMGGLKL*QYQSEN Trigger: GTTCTCACTTTGATACTGCCAAAGCTTAAGTCCTCC...CATCAGACCCCAGTTTACCTCAAGGAGACAGTGATAGGCAGACATCTGTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTCCCACATTCTAAGGTGTGTAGTAAAAGTGAGAGGCATACAATACATTTGGCAGTATCAAAGTaGGAACATTCATGTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VCVPHSKVCSKSERHTIHLAVSK*EHSCGS Trigger: GCTGCCACATGAATGTTCTCACTTTGATACTGCCAA...ATGTATTGTATGCCTCTCACTTTTACTACACACCTTAGAATGTGGGACACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR-3UTR TCA 90 bp | GGAATATTTGCATATACAAAGCCCTGGGTTCATTCTCTAGCACCAATAAAACAGTCTGATGTGGTGTTTTaGAGCCAGACAACAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: GIFAYTKPWVHSLAPIKQSDVVF*SQTTDV Trigger: GACATCTGTTGTCTGGCTTCAAAACACCACATCAGA...CTGTTTTATTGGTGCTAGAGAATGAACCCAGGGCTTTGTATATGCAAATATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTCCCACATTCTAAGGTGTGTAGTAAAAGTGAGAGGCATACAATACATGAAGTAAGAAACAATTaGTTCTCTCCTCCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VCVPHSKVCSKSERHTIHEVRNN*FSPPAC Trigger: ACAGGCAGGAGGAGAGAATCAATTGTTTCTTACTTC...ATGTATTGTATGCCTCTCACTTTTACTACACACCTTAGAATGTGGGACACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGTACTTATGTCATTGCATGCTATATGTGTGTATACATCTTTGACTCATGACTTAGTTTTATTCTGTTaGCTGTGGTCTAGTCACACA | + |
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Preference number: 2 (lower is better) Translates to: TVLMSLHAICVYTSLTHDLVLFC*LWSSHT Trigger: TGTGTGACTAGACCACAGTCAACAGAATAAAACTAA...GTCATGAGTCAAAGATGTATACACACATATAGCATGCAATGACATAAGTACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| 3UTR TCA 72 bp | AGCCAGACAACAGATGTCTGCCTATCACTGTCTCCTTaGGGTAAACTGGGGTCTGATGTAGGGCACAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: SQTTDVCLSLSP*GKLGSDVGHRS Trigger: GCTTCTGTGCCCTACATCAGACCCCAGTTTACCTCAAGGAGACAGTGATAGGCAGACATCTGTTGTCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR CCA 72 bp | GGGGTGAGACAGAAGAGGATGCTGGAGGCGGAGCTTTaGAGTACCAATGGATATTCAGAAGAGTACACAGTC | + |
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Preference number: 3 (lower is better) Translates to: GVRQKRMLEAEL*STNGYSEEYTV Trigger: GACTGTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTCTTCTGTCTCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| 3UTR TCA 72 bp | GAGGCATACAATACATCTCATGAAGTAAGAAACAATTaGTTCTCTCCTCCTGCCTGTGGGTTTCAGGGATCT | + |
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Preference number: 3 (lower is better) Translates to: EAYNTSHEVRNN*FSPPACGFQGS Trigger: AGATCCCTGAAACCCACAGGCAGGAGGAGAGAATCAATTGTTTCTTACTTCATGAGATGTATTGTATGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR CCA 72 bp | TGTAAATTATGTCGTAGGCCAGGAGGACTTAAGCTTTaGCAGTATCAAAGTGAGAACATTCATGTGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CKLCRRPGGLKL*QYQSENIHVAA Trigger: TGCTGCCACATGAATGTTCTCACTTTGATACTGCCAAAGCTTAAGTCCTCCTGGCCTACGACATAATTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR CCA 72 bp | TTAAGCTTTGGCAGTATCAAAGTGAGAACATTCATGTaGCAGCAGATTCCTAGGTGTGATGAGTTGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSFGSIKVRTFM*QQIPRCDELKR Trigger: TCTTTTCAACTCATCACACCTAGGAATCTGCTGCCACATGAATGTTCTCACTTTGATACTGCCAAAGCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR TCA 72 bp | TGTGTAGTAAAAGTGAGAGGCATACAATACATCTCATaGAGTAAGAAACAATTGATTCTCTCCTCCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: CVVKVRGIQYIS*SKKQLILSSCL Trigger: CAGGCAGGAGGAGAGAATCAATTGTTTCTTACTTCATGAGATGTATTGTATGCCTCTCACTTTTACTACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR TCA 72 bp | CTGGGCAATAACATCCAGTCTTGGGATGCTTCTCACTaGGTGAAACTCATTTCTACTGCATTTGTTAATAAT | + |
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Preference number: 3 (lower is better) Translates to: LGNNIQSWDASH*VKLISTAFVNN Trigger: ATTATTAACAAATGCAGTAGAAATGAGTTTCACTCAGTGAGAAGCATCCCAAGACTGGATGTTATTGCCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR GCA 72 bp | GTCATACTGACAAATACCCATTGTCATACAAAACCTTaGTGTAGCCCTATCTCCAGAGAGAAAATAAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: VILTNTHCHTKP*CSPISREKISF Trigger: AAAGCTTATTTTCTCTCTGGAGATAGGGCTACAGCAAGGTTTTGTATGACAATGGGTATTTGTCAGTATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR TCA 72 bp | TTACCCAATGGCCAGAAATCTAAGTTAAAGTCATACTaGCAAATACCCATTGTCATACAAAACCTTGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LPNGQKSKLKSY*QIPIVIQNLAV Trigger: TACAGCAAGGTTTTGTATGACAATGGGTATTTGTCAGTATGACTTTAACTTAGATTTCTGGCCATTGGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR TCA 72 bp | GCAATAACATCCAGTCTTGGGATGCTTCTCACTGAGTaGAACTCATTTCTACTGCATTTGTTAATAATTTCA | + |
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Preference number: 3 (lower is better) Translates to: AITSSLGMLLTE*NSFLLHLLIIS Trigger: TGAAATTATTAACAAATGCAGTAGAAATGAGTTTCACTCAGTGAGAAGCATCCCAAGACTGGATGTTATTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| 3UTR TCA 72 bp | TATACATCTTTGACTCATGACTTAGTTTTATTCTGTTaGCTGTGGTCTAGTCACACAAGACAATCCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: YTSLTHDLVLFC*LWSSHTRQSLF Trigger: GAAAAGGGATTGTCTTGTGTGACTAGACCACAGTCAACAGAATAAAACTAAGTCATGAGTCAAAGATGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR CCA 90 bp | GATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTCAGAAGAGTACACAGTCTGCTCTGCTGCCTCTaGGGCAATCTGACTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: DAGGGALEYQWIFRRVHSLLCCL*GNLTLE Trigger: TTCCAGAGTCAGATTGCCCCAGAGGCAGCAGAGCAG...ACTGTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| 3UTR CAA 72 bp | GGGGGTGAGACAGAAGAGGATGCTGGAGGCGGAGCTTaGGAGTACCAATGGATATTCAGAAGAGTACACAGT | + |
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Preference number: 4 (lower is better) Translates to: GGETEEDAGGGA*EYQWIFRRVHS Trigger: ACTGTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTCTTCTGTCTCACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR CCA 90 bp | GGGGGTGAGACAGAAGAGGATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATAAATCACAAGGGATGCTaGTGTAGGTCTTCTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GGETEEDAGGGALEYQWINHKGC*CRSSFP Trigger: AGGAAAAGAAGACCTACACCAGCATCCCTTGTGATT...TATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTCTTCTGTCTCACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR CCA 90 bp | ATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTCAGAAGAGTACACAGTCGCCTTTCATGGCCGGTaGTGTGTACACACTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: MLEAELWSTNGYSEEYTVAFHGR*CVHTLL Trigger: AAGCAGAGTGTGTACACACCACCGGCCATGAAAGGC...GACTGTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | GGGGTGAGACAGAAGAGGATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTTAGGCGATGCATTCTaGGATTCTTGTGTGTTAGTC | + |
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Preference number: 4 (lower is better) Translates to: GVRQKRMLEAELWSTNGYLGDAF*DSCVLV Trigger: GACTAACACACAAGAATCGCAGAATGCATCGCCTAA...ATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTCTTCTGTCTCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | GAGGATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTCAGAAGAGTACACACACTCTGCTTCCTTTaGTTAGGCGATGCATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: EDAGGGALEYQWIFRRVHTLCFL*LGDAFC Trigger: GCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGT...GTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | GTACCAATGGATATTCAGAAGAGTACACAGTCCAGTTATTTCCAAGAAGCCCTCCCTGATCTGCTCTGCTaGCTCTGGGGCAATCTGACT | + |
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Preference number: 4 (lower is better) Translates to: VPMDIQKSTQSSYFQEALPDLLC*LWGNLT Trigger: AGTCAGATTGCCCCAGAGGCAGCAGAGCAGATCAGG...GAGGGCTTCTTGGAAATAACTGGACTGTGTACTCTTCTGAATATCCATTGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | AGTCACACAAGACAATCCCTTTTCTCTTCTGATTCATCTTCCCCTATGCAGTTGCCTGATCTGCTCTGCTaGCTCTGGGGCAATCTGACT | + |
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Preference number: 4 (lower is better) Translates to: SHTRQSLFSSDSSSPMQLPDLLC*LWGNLT Trigger: AGTCAGATTGCCCCAGAGGCAGCAGAGCAGATCAGG...CAACTGCATAGGGGAAGATGAATCAGAAGAGAAAAGGGATTGTCTTGTGTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR CCA 90 bp | AGTCACACAAGACAATCCCTTTTCTCTTCTGATTCATCTTCCCCTATGCAGTTGCTGCTCTGCTGCCTCTaGGGCAATCTGACTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SHTRQSLFSSDSSSPMQLLLCCL*GNLTLE Trigger: TTCCAGAGTCAGATTGCCCCAGAGGCAGCAGAGCAG...CAACTGCATAGGGGAAGATGAATCAGAAGAGAAAAGGGATTGTCTTGTGTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR TCA 90 bp | GCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTCAGAAGAGTACACAGTCCAGGGAATTATGTTCATTaGGAATCACAAGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: AGGGALEYQWIFRRVHSPGNYVH*ESQGML Trigger: CAGCATCCCTTGTGATTCTCAATGAACATAATTCCC...TGGACTGTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | ATGGATATTCAGAAGAGTACACAGTCCAGTTATTTCCAAGAAGCCCTCTTGCTACCTGATCTGCTCTGCTaGCTCTGGGGCAATCTGACT | + |
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Preference number: 4 (lower is better) Translates to: MDIQKSTQSSYFQEALLLPDLLC*LWGNLT Trigger: AGTCAGATTGCCCCAGAGGCAGCAGAGCAGATCAGG...TAGCAAGAGGGCTTCTTGGAAATAACTGGACTGTGTACTCTTCTGAATATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | GTACCAATGGATATTCAGAAGAGTACACAGTCCAGTTATTTCCAAGAAGCCCTCTTTCCTGATCTGCTCTaGTGCCTCTGGGGCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: VPMDIQKSTQSSYFQEALFPDLL*CLWGNL Trigger: CAGATTGCCCCAGAGGCAGCAGAGCAGATCAGGAAA...GAGGGCTTCTTGGAAATAACTGGACTGTGTACTCTTCTGAATATCCATTGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR CCA 90 bp | ATGGATATTCAGAAGAGTACACAGTCCAGTTATTTCCAAGAAGCCCTCTTGCTACTGCTCTGCTGCCTCTaGGGCAATCTGACTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: MDIQKSTQSSYFQEALLLLLCCL*GNLTLE Trigger: TTCCAGAGTCAGATTGCCCCAGAGGCAGCAGAGCAG...TAGCAAGAGGGCTTCTTGGAAATAACTGGACTGTGTACTCTTCTGAATATCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR TCA 90 bp | GATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTCAGAAGAGTACACAGTGGGAATTATGTTCATTaGGAATCACAAGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: DAGGGALEYQWIFRRVHSGNYVH*ESQGML Trigger: CAGCATCCCTTGTGATTCTCAATGAACATAATTCCC...ACTGTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTCCCACATTCTAAGGTGTGTAGTAAAAGTGAGAGGCATACAATACATTTTCCTGATCTGCTCTaGTGCCTCTGGGGCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: VCVPHSKVCSKSERHTIHFPDLL*CLWGNL Trigger: CAGATTGCCCCAGAGGCAGCAGAGCAGATCAGGAAA...ATGTATTGTATGCCTCTCACTTTTACTACACACCTTAGAATGTGGGACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS-3UTR CCA 90 bp | AGAAGAGGATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTCAGAAGAGTAACGCTGATCCATTCTaGTCTTTCAGATGCTTAACG | + |
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Preference number: 4 (lower is better) Translates to: RRGCWRRSFGVPMDIQKSNADPF*SFRCLT Trigger: CGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTT...ACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR CCA 90 bp | GGGGTGAGACAGAAGAGGATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATCTTCTCATCAATTTCTaGGGAATTATGTTCATTGAG | + |
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Preference number: 4 (lower is better) Translates to: GVRQKRMLEAELWSTNGYLLINF*GIMFIE Trigger: CTCAATGAACATAATTCCCCAGAAATTGATGAGAAG...ATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTCTTCTGTCTCACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | GTCACACAAGACAATCCCTTTTCTCTTCTGATTCATCTTCCCCTATGCAGTTGCTTAGGCGATGCATTCTaGGATTCTTGTGTGTTAGTC | + |
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Preference number: 4 (lower is better) Translates to: VTQDNPFSLLIHLPLCSCLGDAF*DSCVLV Trigger: GACTAACACACAAGAATCGCAGAATGCATCGCCTAA...GCAACTGCATAGGGGAAGATGAATCAGAAGAGAAAAGGGATTGTCTTGTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR GCA 90 bp | AGTCACACAAGACAATCCCTTTTCTCTTCTGATTCATCTTCCCCTATGCAGTTGTCTTTTCTTCTTGGTTaGTTGCTCCTTTCATGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SHTRQSLFSSDSSSPMQLSFLLG*LLLSWP Trigger: CGGCCATGAAAGGAGCAAGCAACCAAGAAGAAAAGA...CAACTGCATAGGGGAAGATGAATCAGAAGAGAAAAGGGATTGTCTTGTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR CCA 90 bp | GATATTCAGAAGAGTACACAGTCCAGTTATTTCCAAGAAGCCCTCTTGCTACCGAATCACAAGGGATGCTaGTGTAGGTCTTCTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: DIQKSTQSSYFQEALLLPNHKGC*CRSSFP Trigger: AGGAAAAGAAGACCTACACCAGCATCCCTTGTGATT...CGGTAGCAAGAGGGCTTCTTGGAAATAACTGGACTGTGTACTCTTCTGAATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | CAATGGATATTCAGAAGAGTACACAGTCCAGTTATTTCCAAGAAGCCCTCTTGCGAGAATCACAAGGGATaGTGGTGTAGGTCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QWIFRRVHSPVISKKPSCENHKG*WCRSSF Trigger: AAAAGAAGACCTACACCAGCATCCCTTGTGATTCTC...GCAAGAGGGCTTCTTGGAAATAACTGGACTGTGTACTCTTCTGAATATCCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR GCA 90 bp | AATGTAAATTATGTCGTAGGCCAGGAGGACTTAAGCTTTGGCAGTATCAAAGTGGAGAATCACAAGGGATaGTGGTGTAGGTCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: NVNYVVGQEDLSFGSIKVENHKG*WCRSSF Trigger: AAAAGAAGACCTACACCAGCATCCCTTGTGATTCTC...CACTTTGATACTGCCAAAGCTTAAGTCCTCCTGGCCTACGACATAATTTACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS-3UTR CCA 90 bp | AATGTAAATTATGTCGTAGGCCAGGAGGACTTAAGCTTTGGCAGTATCAAAGTGAACGCTGATCCATTCTaGTCTTTCAGATGCTTAACG | + |
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Preference number: 4 (lower is better) Translates to: NVNYVVGQEDLSFGSIKVNADPF*SFRCLT Trigger: CGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTT...CACTTTGATACTGCCAAAGCTTAAGTCCTCCTGGCCTACGACATAATTTACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS-3UTR CCA 90 bp | ACAGTACTTATGTCATTGCATGCTATATGTGTGTATACATCTTTGACTCATGACTCCTTTCATGGCCGGTaGTGTGTACACACTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TVLMSLHAICVYTSLTHDSFHGR*CVHTLL Trigger: AAGCAGAGTGTGTACACACCACCGGCCATGAAAGGA...GTCATGAGTCAAAGATGTATACACACATATAGCATGCAATGACATAAGTACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR GCA 90 bp | ACAGTACTTATGTCATTGCATGCTATATGTGTGTATACATCTTTGACTCATGACACACTCTGCTTCCTTTaGTTAGGCGATGCATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TVLMSLHAICVYTSLTHDTLCFL*LGDAFC Trigger: GCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGT...GTCATGAGTCAAAGATGTATACACACATATAGCATGCAATGACATAAGTACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR TCA 90 bp | TCAAAGGCAAAATACTCAGTTACAGTACTTATGTCATTGCATGCTATATGTGTGGGGAATTATGTTCATTaGGAATCACAAGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SKAKYSVTVLMSLHAICVGNYVH*ESQGML Trigger: CAGCATCCCTTGTGATTCTCAATGAACATAATTCCC...CACACATATAGCATGCAATGACATAAGTACTGTAACTGAGTATTTTGCCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR GCA 90 bp | TCAAAGGCAAAATACTCAGTTACAGTACTTATGTCATTGCATGCTATATGTGTGGAGAATCACAAGGGATaGTGGTGTAGGTCTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SKAKYSVTVLMSLHAICVENHKG*WCRSSF Trigger: AAAAGAAGACCTACACCAGCATCCCTTGTGATTCTC...CACACATATAGCATGCAATGACATAAGTACTGTAACTGAGTATTTTGCCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR CCA 90 bp | TCAAAGGCAAAATACTCAGTTACAGTACTTATGTCATTGCATGCTATATGTGTGCTTCTCATCAATTTCTaGGGAATTATGTTCATTGAG | + |
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Preference number: 4 (lower is better) Translates to: SKAKYSVTVLMSLHAICVLLINF*GIMFIE Trigger: CTCAATGAACATAATTCCCCAGAAATTGATGAGAAG...CACACATATAGCATGCAATGACATAAGTACTGTAACTGAGTATTTTGCCTTTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS GCA 90 bp | CTTGCTCCTTTCATGGCCGGTGGTGTGTACACACTCTGCTTCCTTTaGTTAGGCGATGCATTCTGCGATTCTTGTGTGTTAGTCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: LAPFMAGGVYTLCFL*LGDAFCDSCVLVTL Trigger: GAGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATGAAAGGAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR CAA 90 bp | GAGGATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTCAGAAGAGTACACCACACTCTGCTTCCTTaGCTTAGGCGATGCATTCTG | + |
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Preference number: 5 (lower is better) Translates to: EDAGGGALEYQWIFRRVHHTLLP*LRRCIL Trigger: CAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTG...GTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS GCA 90 bp | TTAACGCCTTTCATGGCCGGTGGTGTGTACACACTCTGCTTCCTTTaGTTAGGCGATGCATTCTGCGATTCTTGTGTGTTAGTCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: LTPFMAGGVYTLCFL*LGDAFCDSCVLVTL Trigger: GAGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATGAAAGGCGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS CCA 90 bp | CTTTCACTTGCACTTTCTTCTTCTTCCGGGAACGCTGATCCATTCTaGTCTTTCAGATGCTTAACGCCTTTCATGGCCGGTGGTGTGTAC | + |
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Preference number: 5 (lower is better) Translates to: LSLALSSSSGNADPF*SFRCLTPFMAGGVY Trigger: GTACACACCACCGGCCATGAAAGGCGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTTCCCGGAAGAAGAAGAAAGTGCAAGTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS CCA 90 bp | CCATCTCTTCTTTTCTTCTTGGTTGCTTGCTCCTTTCATGGCCGGTaGTGTGTACACACTCTGCTTCCTTTGCTTAGGCGATGCATTCTG | + |
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Preference number: 5 (lower is better) Translates to: PSLLFFLVACSFHGR*CVHTLLPLLRRCIL Trigger: CAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATGAAAGGAGCAAGCAACCAAGAAGAAAAGAAGAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS TCA 90 bp | CTTCTCTTCTCTTTCACTTGCACTTTCTTCTTCTTCCGGGAACGCTaGTCCATTCTGGTCTTTCAGATGCTTAACGCCTTTCATGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: LLFSFTCTFFFFRER*SILVFQMLNAFHGR Trigger: CCGGCCATGAAAGGCGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTTCCCGGAAGAAGAAGAAAGTGCAAGTGAAAGAGAAGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS GCA 90 bp | ATGCTTAACGCCTGGGGAATTATGTTCATTGAGAATCACAAGGGATaGTGGTGTAGGTCTTCTTTTCCTGATCTGCTCTGCTGCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: MLNAWGIMFIENHKG*WCRSSFPDLLCCLW Trigger: CCAGAGGCAGCAGAGCAGATCAGGAAAAGAAGACCTACACCAGCATCCCTTGTGATTCTCAATGAACATAATTCCCCAGGCGTTAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040863.11 |
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| CDS GCA 90 bp | CATGGCCGGTGGTGTGTACACACTCTGCTTCCTTTGCTTAGGCGATaGATTCTGCGATTCTTGTGTGTTAGTCACTCTCTTCTCATCAAT | + |
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Preference number: 5 (lower is better) Translates to: HGRWCVHTLLPLLRR*ILRFLCVSHSLLIN Trigger: ATTGATGAGAAGAGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS GCA 90 bp | GGTGGTGTGTACACACTCTGCTTCCTTTGCTTAGGCGATGCATTCTaGGATTCTTGTGTGTTAGTCACTCTCTTCTCATCAATTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGVYTLCFLCLGDAF*DSCVLVTLFSSISG Trigger: CCCAGAAATTGATGAGAAGAGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS GCA 90 bp | CTCATCAATTTCTGGGGAATTATGTTCATTGAGAATCACAAGGGATaGTGGTGTAGGTCTTCTTTTCCTGATCTGCTCTGCTGCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LINFWGIMFIENHKG*WCRSSFPDLLCCLW Trigger: CCAGAGGCAGCAGAGCAGATCAGGAAAAGAAGACCTACACCAGCATCCCTTGTGATTCTCAATGAACATAATTCCCCAGAAATTGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS-3UTR CAA 90 bp | ATGCTGGAGGCGGAGCTTTGGAGTACCAATGGATATTCAGAAGAGTACACAGTCGGGGAATTATGTTCATaGAGAATCACAAGGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: MLEAELWSTNGYSEEYTVGELCS*RITRDA Trigger: AGCATCCCTTGTGATTCTCAATGAACATAATTCCCC...GACTGTGTACTCTTCTGAATATCCATTGGTACTCCAAAGCTCCGCCTCCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040863.11 ENSMUST00000090760.9 |
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| CDS-3UTR CAA 90 bp | AGTCACACAAGACAATCCCTTTTCTCTTCTGATTCATCTTCCCCTATGCAGTTGCACACTCTGCTTCCTTaGCTTAGGCGATGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHTRQSLFSSDSSSPMQLHTLLP*LRRCIL Trigger: CAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTG...CAACTGCATAGGGGAAGATGAATCAGAAGAGAAAAGGGATTGTCTTGTGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR CAA 90 bp | AGTCACACAAGACAATCCCTTTTCTCTTCTGATTCATCTTCCCCTATGCAGTTGTTTCTTCTTGGTTGCTaGCTCCTTTCATGGCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHTRQSLFSSDSSSPMQLFLLGC*LLSWPV Trigger: CACCGGCCATGAAAGGAGCAAGCAACCAAGAAGAAA...CAACTGCATAGGGGAAGATGAATCAGAAGAGAAAAGGGATTGTCTTGTGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS CCA 90 bp | CTTTCACTTGCACTTTCTTCTTCTTCCGGGAACGCTGATCCATTCTaGTCTTTCAGATGCTTAACGCCTGGGGAATTATGTTCATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLALSSSSGNADPF*SFRCLTPGELCSLR Trigger: TCTCAATGAACATAATTCCCCAGGCGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTTCCCGGAAGAAGAAGAAAGTGCAAGTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040863.11 |
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| CDS-3UTR CAA 90 bp | AGTCACACAAGACAATCCCTTTTCTCTTCTGATTCATCTTCCCCTATGCAGTTGGGGGAATTATGTTCATaGAGAATCACAAGGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHTRQSLFSSDSSSPMQLGELCS*RITRDA Trigger: AGCATCCCTTGTGATTCTCAATGAACATAATTCCCC...CAACTGCATAGGGGAAGATGAATCAGAAGAGAAAAGGGATTGTCTTGTGTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR CAA 90 bp | GTCACACAAGACAATCCCTTTTCTCTTCTGATTCATCTTCCCCTATGCAGTTGCTCTCTTCTTTTCTTCTaGGTTGCTTGCTCCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VTQDNPFSLLIHLPLCSCSLLFF*VACSFH Trigger: ATGAAAGGAGCAAGCAACCAAGAAGAAAAGAAGAGA...GCAACTGCATAGGGGAAGATGAATCAGAAGAGAAAAGGGATTGTCTTGTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS-3UTR CAA 90 bp | AATGTAAATTATGTCGTAGGCCAGGAGGACTTAAGCTTTGGCAGTATCAAAGTGGGGGAATTATGTTCATaGAGAATCACAAGGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: NVNYVVGQEDLSFGSIKVGELCS*RITRDA Trigger: AGCATCCCTTGTGATTCTCAATGAACATAATTCCCC...CACTTTGATACTGCCAAAGCTTAAGTCCTCCTGGCCTACGACATAATTTACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS GCA 72 bp | TCTTCCGGGAACGCTGATCCATTCTGGTCTTTCAGATaGTTAACGCCTTTCATGGCCGGTGGTGTGTACACA | + |
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Preference number: 6 (lower is better) Translates to: SSGNADPFWSFR*LTPFMAGGVYT Trigger: TGTGTACACACCACCGGCCATGAAAGGCGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTTCCCGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS CCA 72 bp | CTGGTCTTTCAGATGCTTAACGCCTTTCATGGCCGGTaGTGTGTACACACTCTGCTTCCTTTGCTTAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: LVFQMLNAFHGR*CVHTLLPLLRR Trigger: TCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATGAAAGGCGTTAAGCATCTGAAAGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS CAA 90 bp | GCTTGCTCCTTTCATGGCCGGTGGTGTGTACACACTCTGCTTCCTTaGCTTAGGCGATGCATTCTGCGATTCTTGTGTGTTAGTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: ACSFHGRWCVHTLLP*LRRCILRFLCVSHS Trigger: AGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATGAAAGGAGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS CCA 72 bp | GCACTTTCTTCTTCTTCCGGGAACGCTGATCCATTCTaGTCTTTCAGATGCTTAACGCCTTTCATGGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: ALSSSSGNADPF*SFRCLTPFMAG Trigger: ACCGGCCATGAAAGGCGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTTCCCGGAAGAAGAAGAAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS CCA 72 bp | CTTTTCTTCTTGGTTGCTTGCTCCTTTCATGGCCGGTaGTGTGTACACACTCTGCTTCCTTTGCTTAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: LFFLVACSFHGR*CVHTLLPLLRR Trigger: TCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATGAAAGGAGCAAGCAACCAAGAAGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS CAA 90 bp | CTTAACGCCTTTCATGGCCGGTGGTGTGTACACACTCTGCTTCCTTaGCTTAGGCGATGCATTCTGCGATTCTTGTGTGTTAGTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LNAFHGRWCVHTLLP*LRRCILRFLCVSHS Trigger: AGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATGAAAGGCGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS TCA 72 bp | TCTTTCACTTGCACTTTCTTCTTCTTCCGGGAACGCTaGTCCATTCTGGTCTTTCAGATGCTTAACGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SFTCTFFFFRER*SILVFQMLNAW Trigger: CCAGGCGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTTCCCGGAAGAAGAAGAAAGTGCAAGTGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040863.11 |
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| CDS GCA 72 bp | GCCTGGGGAATTATGTTCATTGAGAATCACAAGGGATaGTGGTGTAGGTCTTCTTTTCCTGATCTGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: AWGIMFIENHKG*WCRSSFPDLLC Trigger: GCAGAGCAGATCAGGAAAAGAAGACCTACACCAGCATCCCTTGTGATTCTCAATGAACATAATTCCCCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040863.11 |
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| CDS CCA 72 bp | ATCTCTTCTTTTCTTCTTGGTTGCTTGCTCCTTTCATaGCCGGTGGTGTGTACACACTCTGCTTCCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ISSFLLGCLLLS*PVVCTHSASFA Trigger: AGCAAAGGAAGCAGAGTGTGTACACACCACCGGCCATGAAAGGAGCAAGCAACCAAGAAGAAAAGAAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111780.3 |
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| CDS GCA 72 bp | TCTTCCGGGAACGCTGATCCATTCTGGTCTTTCAGATaGTTAACGCCTGGGGAATTATGTTCATTGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: SSGNADPFWSFR*LTPGELCSLRI Trigger: GATTCTCAATGAACATAATTCCCCAGGCGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTTCCCGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040863.11 |
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| CDS GCA 72 bp | TGGTGTGTACACACTCTGCTTCCTTTGCTTAGGCGATaGATTCTGCGATTCTTGTGTGTTAGTCACTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WCVHTLLPLLRR*ILRFLCVSHSL Trigger: AAGAGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTACACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS TCA 72 bp | TCTTTCACTTGCACTTTCTTCTTCTTCCGGGAACGCTaGTCCATTCTGGTCTTTCAGATGCTTAACGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SFTCTFFFFRER*SILVFQMLNAF Trigger: AAAGGCGTTAAGCATCTGAAAGACCAGAATGGATCAGCGTTCCCGGAAGAAGAAGAAAGTGCAAGTGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090760.9 |
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| CDS GCA 72 bp | TTCTGGGGAATTATGTTCATTGAGAATCACAAGGGATaGTGGTGTAGGTCTTCTTTTCCTGATCTGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FWGIMFIENHKG*WCRSSFPDLLC Trigger: GCAGAGCAGATCAGGAAAAGAAGACCTACACCAGCATCCCTTGTGATTCTCAATGAACATAATTCCCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS GCA 72 bp | TACACACTCTGCTTCCTTTGCTTAGGCGATGCATTCTaGGATTCTTGTGTGTTAGTCACTCTCTTCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: YTLCFLCLGDAF*DSCVLVTLFSS Trigger: TGATGAGAAGAGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS CAA 72 bp | CTGCTTCCTTTGCTTAGGCGATGCATTCTGCGATTCTaGTGTGTTAGTCACTCTCTTCTCATCAATTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPLLRRCILRF*CVSHSLLINFW Trigger: CCAGAAATTGATGAGAAGAGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS CAA 90 bp | GTACACACTCTGCTTCCTTTGCTTAGGCGATGCATTCTGCGATTCTaGTGTGTTAGTCACTCTCTTCTCATCAATTTCTGGGGAATTATG | + |
|
Preference number: 6 (lower is better) Translates to: VHTLLPLLRRCILRF*CVSHSLLINFWGIM Trigger: CATAATTCCCCAGAAATTGATGAGAAGAGAGTGACTAACACACAAGAATCGCAGAATGCATCGCCTAAGCAAAGGAAGCAGAGTGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS CAA 72 bp | TCTTTCAGATGCTTAACGCCTGGGGAATTATGTTCATaGAGAATCACAAGGGATGCTGGTGTAGGTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFRCLTPGELCS*RITRDAGVGLL Trigger: AAGAAGACCTACACCAGCATCCCTTGTGATTCTCAATGAACATAATTCCCCAGGCGTTAAGCATCTGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040863.11 |
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| CDS CAA 90 bp | GTGTTAGTCACTCTCTTCTCATCAATTTCTGGGGAATTATGTTCATaGAGAATCACAAGGGATGCTGGTGTAGGTCTTCTTTTCCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: VLVTLFSSISGELCS*RITRDAGVGLLFLI Trigger: GATCAGGAAAAGAAGACCTACACCAGCATCCCTTGTGATTCTCAATGAACATAATTCCCCAGAAATTGATGAGAAGAGAGTGACTAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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| CDS CAA 72 bp | ACTCTCTTCTCATCAATTTCTGGGGAATTATGTTCATaGAGAATCACAAGGGATGCTGGTGTAGGTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TLFSSISGELCS*RITRDAGVGLL Trigger: AAGAAGACCTACACCAGCATCCCTTGTGATTCTCAATGAACATAATTCCCCAGAAATTGATGAGAAGAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090760.9 ENSMUST00000111780.3 |
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