Pregenerated sensors for PPP1R1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061718Ensembl transcript IDs: ENSMUST00000078694.13, ENSMUST00000137634.2, ENSMUST00000150762.8
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACCTGTAGGCTCTCAGTACCTCCTTTCCCCAGATCTTAGGACCTaGCCTGTGGGTCTCCTGTGCCCAGGGGAGAGAATCTGGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: APVGSQYLLSPDLRT*PVGLLCPGERIWRG Trigger: CCCTCTCCAGATTCTCTCCCCTGGGCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGGGGAAAGGAGGTACTGAGAGCCTACAGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGATCTCAGGGCACCTGTGGGAACACTTCCTCCTaGGAGATACAGGGCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GDSTPTTGRGRRRSQGTCGNTSS*EIQGSE Trigger: CTCAGAGCCCTGTATCTCCCAGGAGGAAGTGTTCCC...ACAGGTGCCCTGAGATCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGATCTCAGGGCACCTGTAGGCATTGGGGACTCTaGGCTTCAGCCAAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: GDSTPTTGRGRRRSQGTCRHWGL*ASAKAN Trigger: GTTTGCTTTGGCTGAAGCCCAGAGTCCCCAATGCCT...ACAGGTGCCCTGAGATCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCTGGTTGAAGTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTAGGCAGGGAAAGGCATTaGGGACTCTGGGCTTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: EPWLKSMRGLGTQRPPLVGRERH*GLWASA Trigger: GGCTGAAGCCCAGAGTCCCCAATGCCTTTCCCTGCC...TACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTTGAGGCTCTGCCTGTGGGTCTCCTGTaGCCAGGGGAGAGAATCTGG | + |
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Preference number: 2 (lower is better) Translates to: LQAPSRNGILREGHVEALPVGLL*PGERIW Trigger: CCAGATTCTCTCCCCTGGGCACAGGAGACCCACAGG...CAGAGCCTCAACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCTGGTTGAAGTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTAGACAGAGTGGGTTTCTaGGGAACACTTCCTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EPWLKSMRGLGTQRPPLVDRVGF*GTLPPG Trigger: CCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTC...TACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGTGAGACCTGAGCCCTGGTTGAAGTCTATGAGAGGGTTGGGGACTCAACGCAGGGTGGGGACAGAGTaGGTTTCTGGGGAACACTTC | + |
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Preference number: 2 (lower is better) Translates to: CVRPEPWLKSMRGLGTQRRVGTE*VSGEHF Trigger: GAAGTGTTCCCCAGAAACCCACTCTGTCCCCACCCT...GCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTCAGGTCTCACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTGGGCTCTCTCACCTCCCTACTCCCACCGGGTAAATAGAAGAATGACTGGCAGGGAAAGGCATTaGGGACTCTGGGCTTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PVWALSPPYSHRVNRRMTGRERH*GLWASA Trigger: GGCTGAAGCCCAGAGTCCCCAATGCCTTTCCCTGCC...AGTCATTCTTCTATTTACCCGGTGGGAGTAGGGAGGTGAGAGAGCCCACACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR CAA 90 bp | AAAGAATGCGTGAGACCTGAGCCCTGGTTGAAGTCTATGAGAGGGTaGGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: KECVRPEPWLKSMRG*GTQRPPLVGEGGDL Trigger: GAGATCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTCAGGTCTCACGCATTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTGTGTGGCCCCCTAAGGACAGATAGTAAGTGCATTCCTGGCACCAAAGCACCAGATCTTAGGACCTaGCCTGTGGGTCTCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: PLCGPLRTDSKCIPGTKAPDLRT*PVGLLC Trigger: GCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGG...TGCTTTGGTGCCAGGAATGCACTTACTATCTGTCCTTAGGGGGCCACACAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGCACAAACAAAACGCAGCAAGCAGCCTCTGCCAGTCCATCTTGCAGGCCCAGATCTTAGGACCTaGCCTGTGGGTCTCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: TKAQTKRSKQPLPVHLAGPDLRT*PVGLLC Trigger: GCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGG...GCCTGCAAGATGGACTGGCAGAGGCTGCTTGCTGCGTTTTGTTTGTGCTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR CAA 90 bp | GACATGTTGAGGCTCTGCAAAGAATGCGTGAGACCTGAGCCCTGGTaGAAGTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTA | + |
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Preference number: 2 (lower is better) Translates to: DMLRLCKECVRPEPW*KSMRGLGTQRPPLV Trigger: TACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTCAGGTCTCACGCATTCTTTGCAGAGCCTCAACATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTGGGCTCTCTCACCTCCCTACTCCCACCGGGTAAATAGAAGAATGACTGACAGAGTGGGTTTCTaGGGAACACTTCCTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PVWALSPPYSHRVNRRMTDRVGF*GTLPPG Trigger: CCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTC...AGTCATTCTTCTATTTACCCGGTGGGAGTAGGGAGGTGAGAGAGCCCACACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTTGAGGCTCTGAGGCATTGGGGACTCTaGGCTTCAGCCAAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: LQAPSRNGILREGHVEALRHWGL*ASAKAN Trigger: GTTTGCTTTGGCTGAAGCCCAGAGTCCCCAATGCCT...CAGAGCCTCAACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR CAA 90 bp | CCAAAGCACAAACAAAACGCAGCAAGCAGCCTCTGCCAGTCCATCTaGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTT | + |
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Preference number: 2 (lower is better) Translates to: PKHKQNAASSLCQSI*QAPSRNGILREGHV Trigger: AACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAAGATGGACTGGCAGAGGCTGCTTGCTGCGTTTTGTTTGTGCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTGGCCCCCTAAGGACAGATAGTAAGTGCATTCCTGGCACCAAAGCACAAGACAGAGTGGGTTTCTaGGGAACACTTCCTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LCGPLRTDSKCIPGTKAQDRVGF*GTLPPG Trigger: CCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTC...TTGTGCTTTGGTGCCAGGAATGCACTTACTATCTGTCCTTAGGGGGCCACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAGCACAAACAAAACGCAGCAAGCAGCCTCTGCCAGTCCATCTTGCAGGCAGGCATTGGGGACTCTaGGCTTCAGCCAAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TKAQTKRSKQPLPVHLAGRHWGL*ASAKAN Trigger: GTTTGCTTTGGCTGAAGCCCAGAGTCCCCAATGCCT...GCCTGCAAGATGGACTGGCAGAGGCTGCTTGCTGCGTTTTGTTTGTGCTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTACCTCCTTTCCCCAGATCTTAGGACCTGCCCTGTGGGTCTCCTGTGCCGAGGGAGGGGACTTGTaGAGAATAAATGGTTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: LSTSFPQILGPALWVSCAEGGDL*RINGCL Trigger: TAAACAACCATTTATTCTCCACAAGTCCCCTCCCTC...GGCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGGGGAAAGGAGGTACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTACCTCCTTTCCCCAGATCTTAGGACCTGCCCTGTGGGTCTCCTGTGCCCTTGTGGAGAATAAATaGTTGTTTATGGCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSTSFPQILGPALWVSCALVENK*LFMAFW Trigger: CCAGAAGGCCATAAACAACCATTTATTCTCCACAAG...GGCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGGGGAAAGGAGGTACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCTGGTTGAAGTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTAATAAATGGTTGTTTATaGCCTTCTGGGGTTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: EPWLKSMRGLGTQRPPLVINGCL*PSGVSS Trigger: ACTGGAAACCCCAGAAGGCCATAAACAACCATTTAT...TACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CCA 90 bp | TGCGTGAGACCTGAGCCCTGGTTGAAGTCTATGAGAGGGTTGGGGACTCAACGCCTTGTGGAGAATAAATaGTTGTTTATGGCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: CVRPEPWLKSMRGLGTQRLVENK*LFMAFW Trigger: CCAGAAGGCCATAAACAACCATTTATTCTCCACAAG...GCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTCAGGTCTCACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR GCA 72 bp | GGCTCTCAGTACCTCCTTTCCCCAGATCTTAGGACCTaGCCTGTGGGTCTCCTGTGCCCAGGGGAGAGAATC | + |
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Preference number: 3 (lower is better) Translates to: GSQYLLSPDLRT*PVGLLCPGERI Trigger: GATTCTCTCCCCTGGGCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGGGGAAAGGAGGTACTGAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGATCTCAGGGCACCTGTGGAGAGGGAGGGGACTaGTGGAGAATAAATGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: GDSTPTTGRGRRRSQGTCGEGGD*WRINGC Trigger: ACAACCATTTATTCTCCACAAGTCCCCTCCCTCTCC...ACAGGTGCCCTGAGATCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGGAGAGGGAGGGGACTaGTGGAGAATAAATGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: KSMRGLGTQRPPLVGEGGGEGGD*WRINGC Trigger: ACAACCATTTATTCTCCACAAGTCCCCTCCCTCTCC...TCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR CCA 72 bp | TTGAGGCTCTGCAAAGAATGCGTGAGACCTGAGCCCTaGTTGAAGTCTATGAGAGGGTTGGGGACTCAACGC | + |
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Preference number: 3 (lower is better) Translates to: LRLCKECVRPEP*LKSMRGLGTQR Trigger: GCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTCAGGTCTCACGCATTCTTTGCAGAGCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CAA 90 bp | GAGCCCTGGTTGAAGTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTAGTGGAGAATAAATGGTaGTTTATGGCCTTCTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: EPWLKSMRGLGTQRPPLVVENKW*FMAFWG Trigger: ACCCCAGAAGGCCATAAACAACCATTTATTCTCCAC...TACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTGGCCCCCTAAGGACAGATAGTAAGTGCATTCCTGGCACCAAAGCACAAAGACCTGAGCCCTGGTaGAAGTCTATGAGAGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: LCGPLRTDSKCIPGTKAQRPEPW*KSMRGL Trigger: CAACCCTCTCATAGACTTCAACCAGGGCTCAGGTCT...TTGTGCTTTGGTGCCAGGAATGCACTTACTATCTGTCCTTAGGGGGCCACACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| 3UTR CCA 72 bp | AGAATCTGGAGAGGGAGGGGACTTGTGGAGAATAAATaGTTGTTTATGGCCTTCTGGGGTTTCCAGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RIWRGRGLVENK*LFMAFWGFQCG Trigger: CCCACACTGGAAACCCCAGAAGGCCATAAACAACCATTTATTCTCCACAAGTCCCCTCCCTCTCCAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR CCA 90 bp | GACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGCTCTGAGCTGTCGGGGGTCGAGCTaGCTCGGGGGCGCGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: DRVGFWGTLPPGRYRALSCRGSS*LGGAGT Trigger: TGTGCCCGCGCCCCCGAGCCAGCTCGACCCCCGACA...GCTCAGAGCCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078694.13 |
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| CDS-3UTR GCA 90 bp | TACCTCCTTTCCCCAGATCTTAGGACCTGCCCTGTGGGTCTCCTGTGCCCAGGGGCCCCACAGTGCCCCTaGTGCCTTTCAGGACCTCCG | + |
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Preference number: 4 (lower is better) Translates to: YLLSPDLRTCPVGLLCPGAPQCP*CLSGPP Trigger: CGGAGGTCCTGAAAGGCAGCAGGGGCACTGTGGGGC...CCCTGGGCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGGGGAAAGGAGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | GGGTGGGGACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGCCCACAGTGCCCCTGCTaGCTTTCAGGACCTCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GWGQSGFLGNTSSWEIQGPQCPC*LSGPPP Trigger: AGGCGGAGGTCCTGAAAGGCAGCAGGGGCACTGTGG...GCCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTCCCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | GGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGATCTCAGGGCACCTGTGCTTCTGCCCCACAGTaGCCCTGCTGCCTTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GDSTPTTGRGRRRSQGTCASAPQ*PCCLSG Trigger: TCCTGAAAGGCAGCAGGGGCACTGTGGGGCAGAAGC...ACAGGTGCCCTGAGATCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | TACCTCCTTTCCCCAGATCTTAGGACCTGCCCTGTGGGTCTCCTGTGCCCAGGGGCTTCTGCCCCACAGTaGCCCTGCTGCCTTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: YLLSPDLRTCPVGLLCPGASAPQ*PCCLSG Trigger: TCCTGAAAGGCAGCAGGGGCACTGTGGGGCAGAAGC...CCCTGGGCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGGGGAAAGGAGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | TTGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTTGAGGCTCTGGCCCCACAGTGCCCCTaGTGCCTTTCAGGACCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LQAPSRNGILREGHVEALAPQCP*CLSGPP Trigger: CGGAGGTCCTGAAAGGCAGCAGGGGCACTGTGGGGC...CAGAGCCTCAACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | TCAGAAGCCGCAGCCCTAGCAGGTGAAAGACAGGGTACAAAGGAGGGTGGGGACGCTTCTGCCCCACAGTaGCCCTGCTGCCTTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SEAAALAGERQGTKEGGDASAPQ*PCCLSG Trigger: TCCTGAAAGGCAGCAGGGGCACTGTGGGGCAGAAGC...GTCCCCACCCTCCTTTGTACCCTGTCTTTCACCTGCTAGGGCTGCGGCTTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | GTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGACCACAAGTAGGCTTCTaGCCCACAGTGCCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VYERVGDSTPTTGRGRRRPQVGF*PTVPLL Trigger: CAGCAGGGGCACTGTGGGGCAGAAGCCTACTTGTGG...TCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR CCA 90 bp | GGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGATCTCAGGGCACCTGTCTCTTCGACTTTGGGTaGTGCCCCTCTCCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GDSTPTTGRGRRRSQGTCLFDFG*CPSPEV Trigger: AACCTCTGGAGAGGGGCACCACCCAAAGTCGAAGAG...ACAGGTGCCCTGAGATCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR TCA 90 bp | TCAGAAGCCGCAGCCCTAGCAGGTGAAAGACAGGGTACAAAGGAGGGTGGGGACTCTCCAGAGGTTCTCTaGTGTGGAGAGGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SEAAALAGERQGTKEGGDSPEVL*CGEASS Trigger: GGAGGAGGCCTCTCCACATCAGAGAACCTCTGGAGA...GTCCCCACCCTCCTTTGTACCCTGTCTTTCACCTGCTAGGGCTGCGGCTTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR TCA 90 bp | GTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGATCTCCAGAGGTTCTCTaGTGTGGAGAGGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VYERVGDSTPTTGRGRRRSPEVL*CGEASS Trigger: GGAGGAGGCCTCTCCACATCAGAGAACCTCTGGAGA...TCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | TTGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTTGAGGCTCTGCCACAGTGCCCCTGCTaGCTTTCAGGACCTCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LQAPSRNGILREGHVEALPQCPC*LSGPPP Trigger: AGGCGGAGGTCCTGAAAGGCAGCAGGGGCACTGTGG...CAGAGCCTCAACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | CTTCTGGGGTTTCCAGTGTGGGCTCTCTCACCTCCCTACTCCCACCGGGTAAATCCACAAGTAGGCTTCTaGCCCACAGTGCCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLGFPVWALSPPYSHRVNPQVGF*PTVPLL Trigger: CAGCAGGGGCACTGTGGGGCAGAAGCCTACTTGTGG...ATTTACCCGGTGGGAGTAGGGAGGTGAGAGAGCCCACACTGGAAACCCCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR GCA 90 bp | TGCGTGAGACCTGAGCCCTGGTTGAAGTCTATGAGAGGGTTGGGGACTCAACGCCCACAAGTAGGCTTCTaGCCCACAGTGCCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CVRPEPWLKSMRGLGTQRPQVGF*PTVPLL Trigger: CAGCAGGGGCACTGTGGGGCAGAAGCCTACTTGTGG...GCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTCAGGTCTCACGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
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| CDS-3UTR TCA 90 bp | GACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGCTCTGAGCTCTCCAGAGGTTCTCTaGTGTGGAGAGGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRVGFWGTLPPGRYRALSSPEVL*CGEASS Trigger: GGAGGAGGCCTCTCCACATCAGAGAACCTCTGGAGA...GCTCAGAGCCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGCCGCAGCCCTAGCAGGTGAAAGACAGGGTACAAAGGAGGGTGGGGACTCCTCTGGTGAGGAGTaGTCTGAGACCCGGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAAALAGERQGTKEGGDSSGEE*SETRKS Trigger: GCTTTTCCGGGTCTCAGAGCACTCCTCACCAGAGGA...GTCCCCACCCTCCTTTGTACCCTGTCTTTCACCTGCTAGGGCTGCGGCTTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGCATTGGGGACTCTGGGCTTCAGCCAAAGCAAACAGAGACCAGCCTTAGTGCCCCACAGTGCCCCTaGTGCCTTTCAGGACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGIGDSGLQPKQTETSLSAPQCP*CLSGPP Trigger: CGGAGGTCCTGAAAGGCAGCAGGGGCACTGTGGGGC...ACTAAGGCTGGTCTCTGTTTGCTTTGGCTGAAGCCCAGAGTCCCCAATGCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGGGACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGCTCTTCGACTTTGGGTaGTGCCCCTCTCCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVGTEWVSGEHFLLGDTGLFDFG*CPSPEV Trigger: AACCTCTGGAGAGGGGCACCACCCAAAGTCGAAGAG...CCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTCCCCACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGGGTTTCCAGTGTGGGCTCTCTCACCTCCCTACTCCCACCGGGTAAATGGGTCTCTTCGACTTTaGGTGGTGCCCCTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGFPVWALSPPYSHRVNGSLRL*VVPLSR Trigger: TCTGGAGAGGGGCACCACCCAAAGTCGAAGAGACCC...ATTTACCCGGTGGGAGTAGGGAGGTGAGAGAGCCCACACTGGAAACCCCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | TACCTCCTTTCCCCAGATCTTAGGACCTGCCCTGTGGGTCTCCTGTGCCCAGGGGAGTTTCCATCTCTCTaGGGCTCATCCAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLLSPDLRTCPVGLLCPGEFPSL*GSSRGG Trigger: ACCTCCTCTGGATGAGCCCCAGAGAGATGGAAACTC...CCCTGGGCACAGGAGACCCACAGGGCAGGTCCTAAGATCTGGGGAAAGGAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| 3UTR CAA 72 bp | GTGAGACCTGAGCCCTGGTTGAAGTCTATGAGAGGGTaGGGGACTCAACGCCCACCACTGGTAGGGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRPEPWLKSMRG*GTQRPPLVGEG Trigger: TCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGACTTCAACCAGGGCTCAGGTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGCTCTGAGCGCGGGCACAGAGAACTaGATCTTCTTGCGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRVGFWGTLPPGRYRALSAGTEN*IFLRSL Trigger: CAAGGACCGCAAGAAGATTCAGTTCTCTGTGCCCGC...GCTCAGAGCCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078694.13 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTTGAGGCTCTGGGGTCTCTTCGACTTTaGGTGGTGCCCCTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQAPSRNGILREGHVEALGSLRL*VVPLSR Trigger: TCTGGAGAGGGGCACCACCCAAAGTCGAAGAGACCC...CAGAGCCTCAACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR GCA 90 bp | GTCTATGAGAGGGTTGGGGACTCAACGCCCACCACTGGTAGGGGAAGGAGGAGACACTTAGTGTTGCTCTaGCTTCCACTTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYERVGDSTPTTGRGRRRHLVLL*LPLGPQ Trigger: CTGAGGACCAAGTGGAAGGCAGAGCAACACTAAGTG...TCTCCTCCTTCCCCTACCAGTGGTGGGCGTTGAGTCCCCAACCCTCTCATAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | CGGGTAAATAGAAGAATGACTGGCAGGGAAAGGCATTGGGGACTCTGGGCTTCAAAGCATGGCAGGGGTTaGTCTCCGGCGCCGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVNRRMTGRERHWGLWASKHGRG*SPAPDH Trigger: ATGATCCGGCGCCGGAGACCAACCCCTGCCATGCTT...TGAAGCCCAGAGTCCCCAATGCCTTTCCCTGCCAGTCATTCTTCTATTTACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078694.13 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTTGAGGCTCTGCTCTTCGACTTTGGGTaGTGCCCCTCTCCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQAPSRNGILREGHVEALLFDFG*CPSPEV Trigger: AACCTCTGGAGAGGGGCACCACCCAAAGTCGAAGAG...CAGAGCCTCAACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGGGCTCTCTCACCTCCCTACTCCCACCGGGTAAATAGAAGAATGACTGGGTCTCTTCGACTTTaGGTGGTGCCCCTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVWALSPPYSHRVNRRMTGSLRL*VVPLSR Trigger: TCTGGAGAGGGGCACCACCCAAAGTCGAAGAGACCC...AGTCATTCTTCTATTTACCCGGTGGGAGTAGGGAGGTGAGAGAGCCCACACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGGGACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGTATAGGCACAGGGGTTaGGTCTCTTCGACTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGTEWVSGEHFLLGDTGYRHRG*VSSTLG Trigger: ACCCAAAGTCGAAGAGACCCAACCCCTGTGCCTATA...CCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTCCCCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGCTCTGAGCGAGTTTCCATCTCTCTaGGGCTCATCCAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DRVGFWGTLPPGRYRALSEFPSL*GSSRGG Trigger: ACCTCCTCTGGATGAGCCCCAGAGAGATGGAAACTC...GCTCAGAGCCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGGGCTCTCTCACCTCCCTACTCCCACCGGGTAAATAGAAGAATGACTTCCTCTGGTGAGGAGTaGTCTGAGACCCGGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVWALSPPYSHRVNRRMTSSGEE*SETRKS Trigger: GCTTTTCCGGGTCTCAGAGCACTCCTCACCAGAGGA...AGTCATTCTTCTATTTACCCGGTGGGAGTAGGGAGGTGAGAGAGCCCACACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGGGTTTCCAGTGTGGGCTCTCTCACCTCCCTACTCCCACCGGGTAAATCACTTAGTGTTGCTCTaGCTTCCACTTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGFPVWALSPPYSHRVNHLVLL*LPLGPQ Trigger: CTGAGGACCAAGTGGAAGGCAGAGCAACACTAAGTG...ATTTACCCGGTGGGAGTAGGGAGGTGAGAGAGCCCACACTGGAAACCCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTTGAGGCTCTGGAGTTTCCATCTCTCTaGGGCTCATCCAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQAPSRNGILREGHVEALEFPSL*GSSRGG Trigger: ACCTCCTCTGGATGAGCCCCAGAGAGATGGAAACTC...CAGAGCCTCAACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGGGTTTCCAGTGTGGGCTCTCTCACCTCCCTACTCCCACCGGGTAAATGCTCTGCCTTCCACTTaGTCCTCAGAGTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGFPVWALSPPYSHRVNALPST*SSEFPS Trigger: AGATGGAAACTCTGAGGACCAAGTGGAAGGCAGAGC...ATTTACCCGGTGGGAGTAGGGAGGTGAGAGAGCCCACACTGGAAACCCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| 3UTR CAA 72 bp | AAACAAAACGCAGCAAGCAGCCTCTGCCAGTCCATCTaGCAGGCACCCAGCAGGAATGGGATACTAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQNAASSLCQSI*QAPSRNGILRE Trigger: CTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAAGATGGACTGGCAGAGGCTGCTTGCTGCGTTTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGGCCCCCTAAGGACAGATAGTAAGTGCATTCCTGGCACCAAAGCACAATCCTCTGGTGAGGAGTaGTCTGAGACCCGGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCGPLRTDSKCIPGTKAQSSGEE*SETRKS Trigger: GCTTTTCCGGGTCTCAGAGCACTCCTCACCAGAGGA...TTGTGCTTTGGTGCCAGGAATGCACTTACTATCTGTCCTTAGGGGGCCACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAAGCACAAACAAAACGCAGCAAGCAGCCTCTGCCAGTCCATCTTGCAGGCTATAGGCACAGGGGTTaGGTCTCTTCGACTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKAQTKRSKQPLPVHLAGYRHRG*VSSTLG Trigger: ACCCAAAGTCGAAGAGACCCAACCCCTGTGCCTATA...GCCTGCAAGATGGACTGGCAGAGGCTGCTTGCTGCGTTTTGTTTGTGCTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGCATTGGGGACTCTGGGCTTCAGCCAAAGCAAACAGAGACCAGCCTTATATAGGCACAGGGGTTaGGTCTCTTCGACTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GKALGTLGFSQSKQRPALYRHRG*VSSTLG Trigger: ACCCAAAGTCGAAGAGACCCAACCCCTGTGCCTATA...TAAGGCTGGTCTCTGTTTGCTTTGGCTGAAGCCCAGAGTCCCCAATGCCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGGCCCCCTAAGGACAGATAGTAAGTGCATTCCTGGCACCAAAGCACAACACTTAGTGTTGCTCTaGCTTCCACTTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCGPLRTDSKCIPGTKAQHLVLL*LPLGPQ Trigger: CTGAGGACCAAGTGGAAGGCAGAGCAACACTAAGTG...TTGTGCTTTGGTGCCAGGAATGCACTTACTATCTGTCCTTAGGGGGCCACACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | CGGGTAAATAGAAGAATGACTGGCAGGGAAAGGCATTGGGGACTCTGGGCTTCAGCTCTGCCTTCCACTTaGTCCTCAGAGTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RVNRRMTGRERHWGLWASALPST*SSEFPS Trigger: AGATGGAAACTCTGAGGACCAAGTGGAAGGCAGAGC...TGAAGCCCAGAGTCCCCAATGCCTTTCCCTGCCAGTCATTCTTCTATTTACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CCA 90 bp | AGAATCTGGAGAGGGAGGGGACTTGTGGAGAATAAATGGTTGTTTATGGCCTTCGCTCTGCCTTCCACTTaGTCCTCAGAGTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RIWRGRGLVENKWLFMAFALPST*SSEFPS Trigger: AGATGGAAACTCTGAGGACCAAGTGGAAGGCAGAGC...GAAGGCCATAAACAACCATTTATTCTCCACAAGTCCCCTCCCTCTCCAGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS CCA 90 bp | AGTGTTGCTCTGCCTTCCACTTGGTCCTCAGAGTTTCCATCTCTCTaGGGCTCATCCAGAGGAGGTGGGCGCTCCCAGGGCCCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVALPSTWSSEFPSL*GSSRGGGRSQGPSR Trigger: TCTGGAGGGGCCCTGGGAGCGCCCACCTCCTCTGGATGAGCCCCAGAGAGATGGAAACTCTGAGGACCAAGTGGAAGGCAGAGCAACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGCACCCAGCAGGAATGGGATACTAAGGGAGGGACATGTTGAGGCTCTGAAAGCATGGCAGGGGTaGGTCTCCGGCGCCGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LQAPSRNGILREGHVEALKAWQG*VSGAGS Trigger: TGATCCGGCGCCGGAGACCAACCCCTGCCATGCTTT...CAGAGCCTCAACATGTCCCTCCCTTAGTATCCCATTCCTGCTGGGTGCCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078694.13 |
||
| CDS-3UTR CAA 90 bp | GGACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGCTCTGAGTGGGTCTCTTCGACTTaGGGTGGTGCCCCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQSGFLGNTSSWEIQGSEWVSST*GGAPLQ Trigger: CTGGAGAGGGGCACCACCCAAAGTCGAAGAGACCCA...CTCAGAGCCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS CCA 90 bp | CCAAGCTCCCGAAGCTCCCCTAACTCATCCTCTTCCTCCGAGGCCTaGTTCTCACTCAAGTTGCTAATGGTCTGCAGGTGCTGCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSRSSPNSSSSSEA*FSLKLLMVCRCCTA Trigger: AGCTGTGCAGCACCTGCAGACCATTAGCAACTTGAGTGAGAACCAGGCCTCGGAGGAAGAGGATGAGTTAGGGGAGCTTCGGGAGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGTGGCCCCCTAAGGACAGATAGTAAGTGCATTCCTGGCACCAAAGCATGGGTCTCTTCGACTTaGGGTGGTGCCCCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLCGPLRTDSKCIPGTKAWVSST*GGAPLQ Trigger: CTGGAGAGGGGCACCACCCAAAGTCGAAGAGACCCA...TGCTTTGGTGCCAGGAATGCACTTACTATCTGTCCTTAGGGGGCCACACAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGGCCCCCTAAGGACAGATAGTAAGTGCATTCCTGGCACCAAAGCACAATGGGTCTCTTCGACTTaGGGTGGTGCCCCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCGPLRTDSKCIPGTKAQWVSST*GGAPLQ Trigger: CTGGAGAGGGGCACCACCCAAAGTCGAAGAGACCCA...TTGTGCTTTGGTGCCAGGAATGCACTTACTATCTGTCCTTAGGGGGCCACACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS-3UTR CAA 90 bp | GGACAGAGTGGGTTTCTGGGGAACACTTCCTCCTGGGAGATACAGGGCTCTGAGCAGGCTCACTTAGTGTaGCTCTGCCTTCCACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GQSGFLGNTSSWEIQGSEQAHLV*LCLPLG Trigger: ACCAAGTGGAAGGCAGAGCAACACTAAGTGAGCCTG...CTCAGAGCCCTGTATCTCCCAGGAGGAAGTGTTCCCCAGAAACCCACTCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS TCA 90 bp | CTCACTCAAGTTGCTAATGGTCTGCAGGTGCTGCACAGCTTTCAGTaGTGGGGGCGTATAGGCACAGGGGTTGGGTCTCTTCGACTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTQVANGLQVLHSFQ*WGRIGTGVGSLRLW Trigger: CCAAAGTCGAAGAGACCCAACCCCTGTGCCTATACGCCCCCATCACTGAAAGCTGTGCAGCACCTGCAGACCATTAGCAACTTGAGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS CAA 72 bp | AGGAGTGCTCTGAGACCCGGAAAAGCATGGCAGGGGTaGGTCTCCGGCGCCGGATCATCTCCACCTGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSALRPGKAWQG*VSGAGSSPPVG Trigger: CCCGACAGGTGGAGATGATCCGGCGCCGGAGACCAACCCCTGCCATGCTTTTCCGGGTCTCAGAGCACTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078694.13 |
||
| CDS CCA 72 bp | CCTCTGGTGAGGAGTGCTCTGAGACCCGGAAAAGCATaGCAGGGGTTGGTCTCCGGCGCCGGATCATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLVRSALRPGKA*QGLVSGAGSSP Trigger: TGGAGATGATCCGGCGCCGGAGACCAACCCCTGCCATGCTTTTCCGGGTCTCAGAGCACTCCTCACCAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078694.13 |
||
| CDS CCA 72 bp | CTGCCTTCCACTTGGTCCTCAGAGTTTCCATCTCTCTaGGGCTCATCCAGAGGAGGTGGGCGCTCCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPSTWSSEFPSL*GSSRGGGRSQG Trigger: GCCCTGGGAGCGCCCACCTCCTCTGGATGAGCCCCAGAGAGATGGAAACTCTGAGGACCAAGTGGAAGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS TCA 72 bp | TTCGACTTTGGGTGGTGCCCCTCTCCAGAGGTTCTCTaGTGTGGAGAGGCCTCCTCCTCTGGTGAGGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FDFGWCPSPEVL*CGEASSSGEEC Trigger: GCACTCCTCACCAGAGGAGGAGGCCTCTCCACATCAGAGAACCTCTGGAGAGGGGCACCACCCAAAGTCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS CAA 90 bp | TCCCCTAACTCATCCTCTTCCTCCGAGGCCTGGTTCTCACTCAAGTaGCTAATGGTCTGCAGGTGCTGCACAGCTTTCAGTGATGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPNSSSSSEAWFSLK*LMVCRCCTAFSDGG Trigger: GCCCCCATCACTGAAAGCTGTGCAGCACCTGCAGACCATTAGCAACTTGAGTGAGAACCAGGCCTCGGAGGAAGAGGATGAGTTAGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS TCA 72 bp | GTTGCTAATGGTCTGCAGGTGCTGCACAGCTTTCAGTaGTGGGGGCGTATAGGCACAGGGGTTGGGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VANGLQVLHSFQ*WGRIGTGVGSL Trigger: AAGAGACCCAACCCCTGTGCCTATACGCCCCCATCACTGAAAGCTGTGCAGCACCTGCAGACCATTAGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||
| CDS CAA 72 bp | TCATCCTCTTCCTCCGAGGCCTGGTTCTCACTCAAGTaGCTAATGGTCTGCAGGTGCTGCACAGCTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSEAWFSLK*LMVCRCCTAFS Trigger: ACTGAAAGCTGTGCAGCACCTGCAGACCATTAGCAACTTGAGTGAGAACCAGGCCTCGGAGGAAGAGGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078694.13 ENSMUST00000137634.2 ENSMUST00000150762.8 |
||