Pregenerated sensors for PPP1R15A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040435Ensembl transcript IDs: ENSMUST00000042105.11, ENSMUST00000167273.2, ENSMUST00000211212.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCCTCTGCCTGGGCAATGCGTCGAGCAAAGCGGCTTCGATCTCGTaGAAACTGCTCCCAGGGACCTCGACGGGCAGCTTGGGCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLCLGNASSKAASIS*KLLPGTSTGSLGWS Trigger: GGACCAGCCCAAGCTGCCCGTCGAGGTCCCTGGGAGCAGTTTGCACGAGATCGAAGCCGCTTTGCTCGACGCATTGCCCAGGCAGAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS GCA 90 bp | GCCTGGGCAATGCGTCGAGCAAAGCGGCTTCGATCTCGTGCAAACTaGTCCCAGGGACCTCGACGGGCAGCTTGGGCTGGTCCTTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: AWAMRRAKRLRSRAN*SQGPRRAAWAGPSE Trigger: CTCGGAAGGACCAGCCCAAGCTGCCCGTCGAGGTCCCTGGGAGCAGTTTGCACGAGATCGAAGCCGCTTTGCTCGACGCATTGCCCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211212.2 |
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| CDS TCA 90 bp | ATGCCTCTGGGACTTCTGGGCCCCTCAGGCGGCTCCAGGCCCGACTaGGCAAGCCCATCAGTGGGGACAGGAGATAGAAGTTGTGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: MPLGLLGPSGGSRPD*ASPSVGTGDRSCGR Trigger: ACGCCCACAACTTCTATCTCCTGTCCCCACTGATGGGCTTGCTCAGTCGGGCCTGGAGCCGCCTGAGGGGCCCAGAAGTCCCAGAGGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS GCA 90 bp | CCCTCTTCTCTAGCCACCACCTCCCCAAGCCTCTTATCAGCCCCTTaGAGGCCAGCGGGCTGTAGTGTGGCCTTGCCAGCTGTGCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: PSSLATTSPSLLSAP*RPAGCSVALPAVRS Trigger: GGAACGCACAGCTGGCAAGGCCACACTACAGCCCGCTGGCCTGCAAGGGGCTGATAAGAGGCTTGGGGAGGTGGTGGCTAGAGAAGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CCA 90 bp | ATCTGCTCCTGTTACTGTTTTTGCCAGCCATGCCTCTGGGACTTCTaGGCCCCTCAGGCGGCTCCAGGCCCGACTGAGCAAGCCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: ICSCYCFCQPCLWDF*APQAAPGPTEQAHQ Trigger: CTGATGGGCTTGCTCAGTCGGGCCTGGAGCCGCCTGAGGGGCCCAGAAGTCCCAGAGGCATGGCTGGCAAAAACAGTAACAGGAGCAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CCA 90 bp | GGGAGTGGCCTCAGAGGAAGAGCGAGGCTCGGACTGTGGAAGAGATaGGTTTCTAAGGCGTGCCCATGCTCTGGCCCTGGAATCAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: GSGLRGRARLGLWKR*VSKACPCSGPGIRG Trigger: ACCCCTGATTCCAGGGCCAGAGCATGGGCACGCCTTAGAAACCCATCTCTTCCACAGTCCGAGCCTCGCTCTTCCTCTGAGGCCACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS GCA 90 bp | GCGAGGCTCGGACTGTGGAAGAGATGGGTTTCTAAGGCGTGCCCATaGTCTGGCCCTGGAATCAGGGGTAAGGTAGGGACCCAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: ARLGLWKRWVSKACP*SGPGIRGKVGTQLL Trigger: GAGAAGCTGGGTCCCTACCTTACCCCTGATTCCAGGGCCAGAGCATGGGCACGCCTTAGAAACCCATCTCTTCCACAGTCCGAGCCTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS CCA 90 bp | TTGGGTCAAGGGAGTGGCCTCAGAGGAAGAGCGAGGCTCGGACTGTaGAAGAGATGGGTTTCTAAGGCGTGCCCATGCTCTGGCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LGQGSGLRGRARLGL*KRWVSKACPCSGPG Trigger: TCCAGGGCCAGAGCATGGGCACGCCTTAGAAACCCATCTCTTCCACAGTCCGAGCCTCGCTCTTCCTCTGAGGCCACTCCCTTGACCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS CCA 90 bp | AGTACAGGCTGGGCGAAGGGGTTTCACTGGGAAGGGGAGAGGGTGTaGTCACATCTTGGGTCAAGGGAGTGGCCTCAGAGGAAGAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: STGWAKGFHWEGERV*SHLGSREWPQRKSE Trigger: CTCGCTCTTCCTCTGAGGCCACTCCCTTGACCCAAGATGTGACCACACCCTCTCCCCTTCCCAGTGAAACCCCTTCGCCCAGCCTGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS GCA 90 bp | CTCAGCCTCAGCATTCCGACAAGGGTGACCCTGCCCTGCCCTGTGTaGCTCTACCTTGGCTTCTCCCTCCTGCTTAGGCTTCTCTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: LSLSIPTRVTLPCPV*LYLGFSLLLRLLSR Trigger: TCTAGAGAGAAGCCTAAGCAGGAGGGAGAAGCCAAGGTAGAGGCACACAGGGCAGGGCAGGGTCACCCTTGTCGGAATGCTGAGGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CCA 90 bp | ATCTCGTGCAAACTGCTCCCAGGGACCTCGACGGGCAGCTTGGGCTaGTCCTGCCCAGACAGCAAGGAAATGGACTGTGACTTTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: ISCKLLPGTSTGSLG*SCPDSKEMDCDFLS Trigger: GCTGAGAAAGTCACAGTCCATTTCCTTGCTGTCTGGGCAGGACCAGCCCAAGCTGCCCGTCGAGGTCCCTGGGAGCAGTTTGCACGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CCA 90 bp | TTCTATCTGATCTGCTCCTGTTACTGTTTTTGCCAGCCATGCCTCTaGGACTTCTGGGCCCCTCAGGCGGCTCCAGGCCCGACTGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: FYLICSCYCFCQPCL*DFWAPQAAPGPTEQ Trigger: TTGCTCAGTCGGGCCTGGAGCCGCCTGAGGGGCCCAGAAGTCCCAGAGGCATGGCTGGCAAAAACAGTAACAGGAGCAGATCAGATAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS GCA 90 bp | CTTCCGTGGCTTGATGTTCTGCCTCCCCCAAGAAAGGCACAGGGGTaGTGGGTTTGTATCCCGGAGCTATGGAAGCAGCAGAAGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LPWLDVLPPPRKAQG*WVCIPELWKQQKLG Trigger: ACCAAGCTTCTGCTGCTTCCATAGCTCCGGGATACAAACCCAGCACCCCTGTGCCTTTCTTGGGGGAGGCAGAACATCAAGCCACGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CCA 90 bp | CCGTGGCTTGATGTTCTGCCTCCCCCAAGAAAGGCACAGGGGTGCTaGGTTTGTATCCCGGAGCTATGGAAGCAGCAGAAGCTTGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: PWLDVLPPPRKAQGC*VCIPELWKQQKLGK Trigger: CTTACCAAGCTTCTGCTGCTTCCATAGCTCCGGGATACAAACCCAGCACCCCTGTGCCTTTCTTGGGGGAGGCAGAACATCAAGCCACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 90 bp | ACTTGTATGTGGGGTGGCACCGGTCTGAGCTGTGTCTTCCTCAGCTaGATCCAAATCGCTGTTTTCTTCCTCTGTGTCCTCTCCTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: TCMWGGTGLSCVFLS*IQIAVFFLCVLSWA Trigger: CGCCCAGGAGAGGACACAGAGGAAGAAAACAGCGATTTGGATTCAGCTGAGGAAGACACAGCTCAGACCGGTGCCACCCCACATACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS GCA 90 bp | TTCAGGAGGGGAACTTTCAGCTTCCACAAGGCAGAGCCTCTGGGCTaGTTGACTCTGTTCAGGAGATCCACTTTCTTCAGTCTCCCCATG | + |
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Preference number: 5 (lower is better) Translates to: FRRGTFSFHKAEPLG*LTLFRRSTFFSLPM Trigger: CATGGGGAGACTGAAGAAAGTGGATCTCCTGAACAGAGTCAAGCAGCCCAGAGGCTCTGCCTTGTGGAAGCTGAAAGTTCCCCTCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 90 bp | AGGCTTCTCTCTAGAGTAGTACTCCCAGGCTCTGGAGTGGGAGCCTaGAGAAGGAGAGTTGGAGGGGTCAGCCTTGTTTTCTGTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: RLLSRVVLPGSGVGA*RRRVGGVSLVFCSF Trigger: AAAGGAACAGAAAACAAGGCTGACCCCTCCAACTCTCCTTCTTCAGGCTCCCACTCCAGAGCCTGGGAGTACTACTCTAGAGAGAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 90 bp | TCTAAGGTCATCTTGTCCTGGCTTTGCATTGTACTCATCAACATTTaGAAGTCCCCAAGTTTCAGGAGGGGAACTTTCAGCTTCCACAAG | + |
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Preference number: 5 (lower is better) Translates to: SKVILSWLCIVLINI*KSPSFRRGTFSFHK Trigger: CTTGTGGAAGCTGAAAGTTCCCCTCCTGAAACTTGGGGACTTTCAAATGTTGATGAGTACAATGCAAAGCCAGGACAAGATGACCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 72 bp | GGACTTCTGGGCCCCTCAGGCGGCTCCAGGCCCGACTaGGCAAGCCCATCAGTGGGGACAGGAGATAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GLLGPSGGSRPD*ASPSVGTGDRS Trigger: ACTTCTATCTCCTGTCCCCACTGATGGGCTTGCTCAGTCGGGCCTGGAGCCGCCTGAGGGGCCCAGAAGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS GCA 72 bp | CTAGCCACCACCTCCCCAAGCCTCTTATCAGCCCCTTaGAGGCCAGCGGGCTGTAGTGTGGCCTTGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LATTSPSLLSAP*RPAGCSVALPA Trigger: AGCTGGCAAGGCCACACTACAGCCCGCTGGCCTGCAAGGGGCTGATAAGAGGCTTGGGGAGGTGGTGGCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CAA 90 bp | GGGCGAAGGGGTTTCACTGGGAAGGGGAGAGGGTGTGGTCACATCTaGGGTCAAGGGAGTGGCCTCAGAGGAAGAGCGAGGCTCGGACTG | + |
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Preference number: 6 (lower is better) Translates to: GRRGFTGKGRGCGHI*GQGSGLRGRARLGL Trigger: CAGTCCGAGCCTCGCTCTTCCTCTGAGGCCACTCCCTTGACCCAAGATGTGACCACACCCTCTCCCCTTCCCAGTGAAACCCCTTCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS GCA 72 bp | CTCAGCCTCAGCATTCCGACAAGGGTGACCCTGCCCTaGCCTGTGTGCCTCTACCTTGGCTTCTCCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSLSIPTRVTLP*PVCLYLGFSLL Trigger: CAGGAGGGAGAAGCCAAGGTAGAGGCACACAGGGCAGGGCAGGGTCACCCTTGTCGGAATGCTGAGGCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS GCA 72 bp | CTGGGCAATGCGTCGAGCAAAGCGGCTTCGATCTCGTaGAAACTGCTCCCAGGGACCTCGACGGGCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LGNASSKAASIS*KLLPGTSTGSL Trigger: CAAGCTGCCCGTCGAGGTCCCTGGGAGCAGTTTGCACGAGATCGAAGCCGCTTTGCTCGACGCATTGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS CCA 72 bp | AAACTGCTCCCAGGGACCTCGACGGGCAGCTTGGGCTaGTCCTGCCCAGACAGCAAGGAAATGGACTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: KLLPGTSTGSLG*SCPDSKEMDCD Trigger: GTCACAGTCCATTTCCTTGCTGTCTGGGCAGGACCAGCCCAAGCTGCCCGTCGAGGTCCCTGGGAGCAGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CCA 72 bp | TGGGCGAAGGGGTTTCACTGGGAAGGGGAGAGGGTGTaGTCACATCTTGGGTCAAGGGAGTGGCCTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: WAKGFHWEGERV*SHLGSREWPQR Trigger: CCTCTGAGGCCACTCCCTTGACCCAAGATGTGACCACACCCTCTCCCCTTCCCAGTGAAACCCCTTCGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS CCA 72 bp | CGTGCAAACTGCTCCCAGGGACCTCGACGGGCAGCTTaGGCTGGTCCTTCCGAGCTTTTAGAGGAATCTCGG | + |
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Preference number: 6 (lower is better) Translates to: RANCSQGPRRAA*AGPSELLEESR Trigger: CCGAGATTCCTCTAAAAGCTCGGAAGGACCAGCCCAAGCTGCCCGTCGAGGTCCCTGGGAGCAGTTTGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211212.2 |
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| CDS GCA 72 bp | AGCATTCCGACAAGGGTGACCCTGCCCTGCCCTGTGTaGCTCTACCTTGGCTTCTCCCTCCTGCTTAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SIPTRVTLPCPV*LYLGFSLLLRL Trigger: AAGCCTAAGCAGGAGGGAGAAGCCAAGGTAGAGGCACACAGGGCAGGGCAGGGTCACCCTTGTCGGAATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CCA 72 bp | CTCAGAGGAAGAGCGAGGCTCGGACTGTGGAAGAGATaGGTTTCTAAGGCGTGCCCATGCTCTGGCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LRGRARLGLWKR*VSKACPCSGPG Trigger: TCCAGGGCCAGAGCATGGGCACGCCTTAGAAACCCATCTCTTCCACAGTCCGAGCCTCGCTCTTCCTCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS CCA 72 bp | GGGAGTGGCCTCAGAGGAAGAGCGAGGCTCGGACTGTaGAAGAGATGGGTTTCTAAGGCGTGCCCATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSGLRGRARLGL*KRWVSKACPCS Trigger: AGAGCATGGGCACGCCTTAGAAACCCATCTCTTCCACAGTCCGAGCCTCGCTCTTCCTCTGAGGCCACTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS CAA 72 bp | GGTTTCACTGGGAAGGGGAGAGGGTGTGGTCACATCTaGGGTCAAGGGAGTGGCCTCAGAGGAAGAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: GFTGKGRGCGHI*GQGSGLRGRAR Trigger: CCTCGCTCTTCCTCTGAGGCCACTCCCTTGACCCAAGATGTGACCACACCCTCTCCCCTTCCCAGTGAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS CAA 72 bp | TCGTGCAAACTGCTCCCAGGGACCTCGACGGGCAGCTaGGGCTGGTCCTTCCGAGCTTTTAGAGGAATCTCG | + |
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Preference number: 6 (lower is better) Translates to: SCKLLPGTSTGS*GWSFRAFRGIS Trigger: CGAGATTCCTCTAAAAGCTCGGAAGGACCAGCCCAAGCTGCCCGTCGAGGTCCCTGGGAGCAGTTTGCACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211212.2 |
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| CDS TCA 72 bp | GGGGGTGGCACCGGTCTGAGCTGTGTCTTCCTCAGCTaGATCCGAATCGCTGTCTTCTTCCTCTGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GGGTGLSCVFLS*IRIAVFFLCVL Trigger: GAGGACACAGAGGAAGAAGACAGCGATTCGGATTCAGCTGAGGAAGACACAGCTCAGACCGGTGCCACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CAA 72 bp | TCTGCCTCCCCCAAGAAAGGCACAGGGGTGCTGGGTTaGTATCCCGGAGCTATGGAAGCAGCAGAAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SASPKKGTGVLG*YPGAMEAAEAW Trigger: CCAAGCTTCTGCTGCTTCCATAGCTCCGGGATACAAACCCAGCACCCCTGTGCCTTTCTTGGGGGAGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CAA 72 bp | GTAGACAACGCTGGGGCTGAAGGCAGGGACTCTGGCTaGAGTCAGCTGTTTCTGAGTCACCTGGGGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: VDNAGAEGRDSG*SQLFLSHLGPH Trigger: ATGTGGCCCCAGGTGACTCAGAAACAGCTGACTCAAGCCAGAGTCCCTGCCTTCAGCCCCAGCGTTGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CAA 90 bp | TCTCTCCTGGTAGACAACGCTGGGGCTGAAGGCAGGGACTCTGGCTaGAGTCAGCTGTTTCTGAGTCACCTGGGGCCACATTCTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: SLLVDNAGAEGRDSG*SQLFLSHLGPHSHC Trigger: ACAGTGAGAATGTGGCCCCAGGTGACTCAGAAACAGCTGACTCAAGCCAGAGTCCCTGCCTTCAGCCCCAGCGTTGTCTACCAGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 72 bp | GGGGGTGGCACCGGTCTGAGCTGTGTCTTCCTCAGCTaGATCCGAATCGCTGTTGTCTTCTTCCTCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GGGTGLSCVFLS*IRIAVVFFLCV Trigger: GACACAGAGGAAGAAGACAACAGCGATTCGGATTCAGCTGAGGAAGACACAGCTCAGACCGGTGCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS GCA 72 bp | AGGCTCGGACTGTGGAAGAGATGGGTTTCTAAGGCGTaGCCATGCTCTGGCCCTGGAATCAGGGGTAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: RLGLWKRWVSKA*PCSGPGIRGKV Trigger: TACCTTACCCCTGATTCCAGGGCCAGAGCATGGGCACGCCTTAGAAACCCATCTCTTCCACAGTCCGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 ENSMUST00000211212.2 |
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| CDS CCA 72 bp | GATGTTCTGCCTCCCCCAAGAAAGGCACAGGGGTGCTaGGTTTGTATCCCGGAGCTATGGAAGCAGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: DVLPPPRKAQGC*VCIPELWKQQK Trigger: CTTCTGCTGCTTCCATAGCTCCGGGATACAAACCCAGCACCCCTGTGCCTTTCTTGGGGGAGGCAGAACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 72 bp | GGGGGTGGCACCGGTCTGAGCTGTGTCTTCCTCAGCTaGATCCAAATCGCTGTTTTCTTCCTCTGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GGGTGLSCVFLS*IQIAVFFLCVL Trigger: GAGGACACAGAGGAAGAAAACAGCGATTTGGATTCAGCTGAGGAAGACACAGCTCAGACCGGTGCCACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CAA 90 bp | AGGAGGGGAACTTTCAGCTTCCACAAGGCAGAGCCTCTGGGCTGCTaGACTCTGTTCAGGAGATCCACTTTCTTCAGTCTCCCCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: RRGTFSFHKAEPLGC*TLFRRSTFFSLPMR Trigger: CCTCATGGGGAGACTGAAGAAAGTGGATCTCCTGAACAGAGTCAAGCAGCCCAGAGGCTCTGCCTTGTGGAAGCTGAAAGTTCCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 72 bp | ACAGGGGTAGGTGTCAGCAGAGCCGCAGCTTCTATCTaGTCTGCTCCTGTTACTGTTTTTGCCAGCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: TGVGVSRAAASI*SAPVTVFASHA Trigger: GGCATGGCTGGCAAAAACAGTAACAGGAGCAGATCAGATAGAAGCTGCGGCTCTGCTGACACCTACCCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 72 bp | TGGGGTGGCACCGGTCTGAGCTGTGTCTTCCTCAGCTaGATCCAAATCGCTGTTTTCTTCCTCTGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: WGGTGLSCVFLS*IQIAVFFLCVL Trigger: GAGGACACAGAGGAAGAAAACAGCGATTTGGATTCAGCTGAGGAAGACACAGCTCAGACCGGTGCCACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 72 bp | TTCAGGAAGGGACTTGTATGTGGGGTGGCACCGGTCTaGGCTGTGTCTTCCTCAGCTGAATCCAAATCGCTG | + |
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Preference number: 6 (lower is better) Translates to: FRKGLVCGVAPV*AVSSSAESKSL Trigger: CAGCGATTTGGATTCAGCTGAGGAAGACACAGCTCAGACCGGTGCCACCCCACATACAAGTCCCTTCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS GCA 72 bp | GGTAGGTGTCAGCAGAGCCGCAGCTTCTATCTGATCTaGTCCTGTTACTGTTTTTGCCAGCCATGCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GRCQQSRSFYLI*SCYCFCQPCLW Trigger: CCAGAGGCATGGCTGGCAAAAACAGTAACAGGAGCAGATCAGATAGAAGCTGCGGCTCTGCTGACACCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CAA 90 bp | CGTTCCATTTCCTTCTCTCTAAGGTCATCTTGTCCTGGCTTTGCATaGTACTCATCAACATTTGAAAGTCCCCAAGTTTCAGGAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: RSISFSLRSSCPGFA*YSSTFESPQVSGGE Trigger: TTCCCCTCCTGAAACTTGGGGACTTTCAAATGTTGATGAGTACAATGCAAAGCCAGGACAAGATGACCTTAGAGAGAAGGAAATGGAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS TCA 72 bp | ATCTTGTCCTGGCTTTGCATTGTACTCATCAACATTTaGAAGTCCCCAAGTTTCAGGAGGGGAACTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ILSWLCIVLINI*KSPSFRRGTFS Trigger: GCTGAAAGTTCCCCTCCTGAAACTTGGGGACTTTCAAATGTTGATGAGTACAATGCAAAGCCAGGACAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CAA 72 bp | CATCTTGTCCTGGCTTTGCATTGTACTCATCAACATTaGAAAGTCCCCAAGTTTCAGGAGGGGAACTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HLVLALHCTHQH*KVPKFQEGNFQ Trigger: CTGAAAGTTCCCCTCCTGAAACTTGGGGACTTTCAAATGTTGATGAGTACAATGCAAAGCCAGGACAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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| CDS CAA 72 bp | TCCTTCTCTCTAAGGTCATCTTGTCCTGGCTTTGCATaGTACTCATCAACATTTGAAAGTCCCCAAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SFSLRSSCPGFA*YSSTFESPQVS Trigger: TGAAACTTGGGGACTTTCAAATGTTGATGAGTACAATGCAAAGCCAGGACAAGATGACCTTAGAGAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042105.11 ENSMUST00000167273.2 |
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