Pregenerated sensors for PPP1R14D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027317Ensembl transcript IDs: ENSMUST00000076084.6, ENSMUST00000110820.3
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGACTCCCAGAGAGCCCAACTGAGAGCCAGCTGTGGCTGCATATaGAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ADSQRAQLRASCGCI*KCGLYKCLSLSSAA Trigger: GGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGGGCTCTCTGGGAGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR CCA 90 bp | CCAGAGAGCCCAACTGAGAGCCAGCTGTGGCTGCATATGCAAGTGTaGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: PESPTESQLWLHMQV*AIQVSLFVFCSPCP Trigger: TGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGGGCTCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR GCA 90 bp | ACTACAGCTGACTCCCAGAGAGCCCAACTGAGAGCCAGCTGTGGCTaGATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: TTADSQRAQLRASCG*ICKCGLYKCLSLSS Trigger: AGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGGGCTCTCTGGGAGTCAGCTGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR TCA 90 bp | GGTTTATCTTGGCTGCTAAGGAAAAGCATTAGACAAAACTACAGCTaGCTCCCAGAGAGCCCAACTGAGAGCCAGCTGTGGCTGCATATG | + |
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Preference number: 1 (lower is better) Translates to: GLSWLLRKSIRQNYS*LPESPTESQLWLHM Trigger: CATATGCAGCCACAGCTGGCTCTCAGTTGGGCTCTCTGGGAGTCAGCTGTAGTTTTGTCTAATGCTTTTCCTTAGCAGCCAAGATAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076084.6 |
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| 3UTR GCA 90 bp | CTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTaGAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: LHMQVWAIQVSLFVF*SPCPYPRLFSQYPG Trigger: ACCTGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTGGATCCTGGCAGTGCTaGGGCTTCAGGAGATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LHMQVWAIQVSLFVFCSPGSWQC*GFRRWS Trigger: GGACCATCTCCTGAAGCCTCAGCACTGCCAGGATCC...AGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076084.6 |
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| 3UTR CAA 90 bp | GCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTaGTCCATATCCAAGACTTTTCAGCCAGTATCCAGGTCAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: ASVGYTSVSLCLLQP*SISKTFQPVSRSGM Trigger: CATTCCTGACCTGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR GCA 72 bp | GACTCCCAGAGAGCCCAACTGAGAGCCAGCTGTGGCTaGATATGCAAGTGTGGGCTATACAAGTGTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: DSQRAQLRASCG*ICKCGLYKCLS Trigger: AGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGGGCTCTCTGGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR TCA 72 bp | TGGCTGCTAAGGAAAAGCATTAGACAAAACTACAGCTaGCTCCCAGAGAGCCCAACTGAGAGCCAGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: WLLRKSIRQNYS*LPESPTESQLW Trigger: CCACAGCTGGCTCTCAGTTGGGCTCTCTGGGAGTCAGCTGTAGTTTTGTCTAATGCTTTTCCTTAGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR GCA 72 bp | CAGAGAGCCCAACTGAGAGCCAGCTGTGGCTGCATATaGAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: QRAQLRASCGCI*KCGLYKCLSLS Trigger: AGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGGGCTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR CCA 72 bp | CCAACTGAGAGCCAGCTGTGGCTGCATATGCAAGTGTaGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PTESQLWLHMQV*AIQVSLFVFCS Trigger: GCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| 3UTR GCA 72 bp | CAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTaGAGCCCTTGTCCATATCCAAGACTTTTCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: QVWAIQVSLFVF*SPCPYPRLFSQ Trigger: CTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCTCACCGTCAGCCGGCTaGGTCTCCGGGACCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSLSSAALVHIQDFSASISPSAG*VSGTWA Trigger: TGCCCAGGTCCCGGAGACCCAGCCGGCTGACGGTGA...GATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR TCA 90 bp | TGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTTAGCCAGCGCTGCAGATaGCCCCGGTCATACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: CICKCGLYKCLSLSSAALSQRCR*PRSYFT Trigger: GGTGAAGTATGACCGGGGTCATCTGCAGCGCTGGCT...AAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR TCA 90 bp | TTGTCCATATCCAAGACTTTTCAGCCAGTATCCAGGTCAGGAATGTGGATCCTGAGCCAGCGCTGCAGATaGCCCCGGTCATACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: LSISKTFQPVSRSGMWILSQRCR*PRSYFT Trigger: GGTGAAGTATGACCGGGGTCATCTGCAGCGCTGGCT...CAGGATCCACATTCCTGACCTGGATACTGGCTGAAAAGTCTTGGATATGGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR GCA 90 bp | GGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCTGTCTGGGTTGTCTGTaGCAGGGCTGGGAGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: GCICKCGLYKCLSLSSAACLGCL*QGWEMY Trigger: GTACATCTCCCAGCCCTGGCACAGACAACCCAGACA...GGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR GCA 90 bp | GGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCGGGTTCTTTGGCTGCTaGCTTCCTCAGTTGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GCICKCGLYKCLSLSSAAGFFGC*LPQLLG Trigger: CCCAAGCAACTGAGGAAGGCAGCAGCCAAAGAACCC...GGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | GAGAGCCCAACTGAGAGCCAGCTGTGGCTGCATATGCAAGTGTGGGCTATACAATTGACTCTGAGTCTGTaGACGATGCCCTCCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ESPTESQLWLHMQVWAIQLTLSL*TMPSFS Trigger: AGAGAAGGAGGGCATCGTCCACAGACTCAGAGTCAA...TTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGGGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | GGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCTTGCCTGGGCAGTCTTaGAGAATGGCCTCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GCICKCGLYKCLSLSSAALPGQS*RMASSC Trigger: ACAGCTGGAGGCCATTCTCCAAGACTGCCCAGGCAA...GGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | ATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCATGTCTGTGCCAGGGCTaGGAGATGTACAGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: MQVWAIQVSLFVFCSPCPCLCQG*EMYRKQ Trigger: CTGCTTCCTGTACATCTCCCAGCCCTGGCACAGACA...TGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | TGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGATGTCTGTGCCAGGGCTaGGAGATGTACAGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: WAIQVSLFVFCSPCPYPRCLCQG*EMYRKQ Trigger: CTGCTTCCTGTACATCTCCCAGCCCTGGCACAGACA...TCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | GGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCTTGACTCTGAGTCTGTaGACGATGCCCTCCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GCICKCGLYKCLSLSSAALTLSL*TMPSFS Trigger: AGAGAAGGAGGGCATCGTCCACAGACTCAGAGTCAA...GGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCCAGGCTCTCTGTTGCCTaGGCAGTCTTGGAGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: SLCLLQPLSISKTFQPVSRLSVA*AVLENG Trigger: GCCATTCTCCAAGACTGCCCAGGCAACAGAGAGCCT...GGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | TGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTTAGGCTCTCTGTTGCCTaGGCAGTCTTGGAGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: CICKCGLYKCLSLSSAALRLSVA*AVLENG Trigger: GCCATTCTCCAAGACTGCCCAGGCAACAGAGAGCCT...AAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | CCAACTGAGAGCCAGCTGTGGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTTTGACCCTTGTAAAGTaGGTTCTTTGGCTGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PTESQLWLHMQVWAIQVSLTLVK*VLWLLP Trigger: AGGCAGCAGCCAAAGAACCCACTTTACAAGGGTCAA...AGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR TCA 90 bp | CAAGACTTTTCAGCCAGTATCCAGGTCAGGAATGTGGATCCTGGCAGTGCTGAGCTGTTGACAAGTCCATaGGAGCTTCCAGATCAATCT | + |
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Preference number: 4 (lower is better) Translates to: QDFSASIQVRNVDPGSAELLTSP*ELPDQS Trigger: AGATTGATCTGGAAGCTCTCATGGACTTGTCAACAG...CTCAGCACTGCCAGGATCCACATTCCTGACCTGGATACTGGCTGAAAAGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR TCA 90 bp | ACTGAGAGCCAGCTGTGGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCCTGTTGACAAGTCCATaGGAGCTTCCAGATCAATCT | + |
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Preference number: 4 (lower is better) Translates to: TESQLWLHMQVWAIQVSLLLTSP*ELPDQS Trigger: AGATTGATCTGGAAGCTCTCATGGACTTGTCAACAG...GAGAGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR GCA 90 bp | GCTGTGGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGAGTGGGTTCTTTGGCTaGTGCCTTCCTCAGTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: AVAAYASVGYTSVSLCLLSGFFG*CLPQLL Trigger: AAGCAACTGAGGAAGGCAGCAGCCAAAGAACCCACT...CAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR TCA 90 bp | TTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCCAGGTCTCAGAAGATTCTTCTTaGCCCTGGAAGAGTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSSAALVHIQDFSASIQVSEDSS*PWKSSW Trigger: CCAGGAACTCTTCCAGGGTCAAGAAGAATCTTCTGA...GACCTGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076084.6 |
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| CDS-3UTR TCA 90 bp | GTCCATATCCAAGACTTTTCAGCCAGTATCCAGGTCAGGAATGTGGATCCTGGCCGAAGTCTCTTGAGTTaGCTGAGTAGCTCAGAGATA | + |
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Preference number: 4 (lower is better) Translates to: VHIQDFSASIQVRNVDPGRSLLS*LSSSEI Trigger: TATCTCTGAGCTACTCAGTCAACTCAAGAGACTTCG...GCCAGGATCCACATTCCTGACCTGGATACTGGCTGAAAAGTCTTGGATATGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR GCA 90 bp | CTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTGTCTGGGTTGTCTGTaGCAGGGCTGGGAGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: LYKCLSLSSAALVHIQDFCLGCL*QGWEMY Trigger: GTACATCTCCCAGCCCTGGCACAGACAACCCAGACA...AAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR GCA 90 bp | CTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCCATTGCTTGGGAGGACTTaGCCTGAGATGTCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LFVFCSPCPYPRLFSQYPLLGRT*PEMSGR Trigger: TCTTCCAGACATCTCAGGGCAAGTCCTCCCAAGCAA...TGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR TCA 90 bp | GTGGGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGCGAAGTCTCTTGAGTTaGCTGAGTAGCTCAGAGATA | + |
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Preference number: 4 (lower is better) Translates to: VGYTSVSLCLLQPLSISKRSLLS*LSSSEI Trigger: TATCTCTGAGCTACTCAGTCAACTCAAGAGACTTCG...CTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | TGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTGTAAAGTGGGTTCTTTaGCTGCTGCCTTCCTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: CLSLSSAALVHIQDFSASVKWVL*LLPSSV Trigger: AACTGAGGAAGGCAGCAGCCAAAGAACCCACTTTAC...ACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| 3UTR CAA 72 bp | GGCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTaGTCCATATCCAAGACTTTTCAGCCAGTATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GYTSVSLCLLQP*SISKTFQPVSR Trigger: CCTGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR TCA 90 bp | TATCCAAGACTTTTCAGCCAGTATCCAGGTCAGGAATGTGGATCCTGGCAGTGCTTAGAAATGTCCAAGTaGGTCTTTGACTCTGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: YPRLFSQYPGQECGSWQCLEMSK*VFDSES Trigger: AGACTCAGAGTCAAAGACTCACTTGGACATTTCTAA...GCACTGCCAGGATCCACATTCCTGACCTGGATACTGGCTGAAAAGTCTTGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CCA 90 bp | GTTCCTAAAGGTTTATCTTGGCTGCTAAGGAAAAGCATTAGACAAAACTACAGCTTGCCTGGGCAGTCTTaGAGAATGGCCTCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VPKGLSWLLRKSIRQNYSLPGQS*RMASSC Trigger: ACAGCTGGAGGCCATTCTCCAAGACTGCCCAGGCAA...GCTGTAGTTTTGTCTAATGCTTTTCCTTAGCAGCCAAGATAAACCTTTAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076084.6 |
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| 3UTR CAA 72 bp | TGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCTTaGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: CICKCGLYKCLS*SSAALVHIQDF Trigger: AAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGCCCACACTTGCATATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR TCA 90 bp | TTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCCAGGTTTAGAAATGTCCAAGTaGGTCTTTGACTCTGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: FVFCSPCPYPRLFSQYPGLEMSK*VFDSES Trigger: AGACTCAGAGTCAAAGACTCACTTGGACATTTCTAA...ACCTGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS CCA 90 bp | CGATGCCCTCCTTCTCTTCTCAGAAGCCCAGTGGACCTTCTTGTCTaGGTTGTCTGTGCCAGGGCTGGGAGATGTACAGGAAGCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RCPPSLLRSPVDLLV*VVCARAGRCTGSRA Trigger: AGCCCTGCTTCCTGTACATCTCCCAGCCCTGGCACAGACAACCCAGACAAGAAGGTCCACTGGGCTTCTGAGAAGAGAAGGAGGGCATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS TCA 90 bp | AGCCGGCTGGGTCTCCGGGACCTGGGCAACTTAGAAATGTCCAAGTaGGTCTTTGACTCTGAGTCTGTGGACGATGCCCTCCTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SRLGLRDLGNLEMSK*VFDSESVDDALLLF Trigger: GAAGAGAAGGAGGGCATCGTCCACAGACTCAGAGTCAAAGACTCACTTGGACATTTCTAAGTTGCCCAGGTCCCGGAGACCCAGCCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS GCA 90 bp | AGTGGGTTCTTTGGCTGCTGCCTTCCTCAGTTGCTTGGGAGGACTTaGCCTGAGATGTCTGGAAGAGTTCCTGGACCTGAGCATCTACCC | + |
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Preference number: 5 (lower is better) Translates to: SGFFGCCLPQLLGRT*PEMSGRVPGPEHLP Trigger: GGGTAGATGCTCAGGTCCAGGAACTCTTCCAGACATCTCAGGGCAAGTCCTCCCAAGCAACTGAGGAAGGCAGCAGCCAAAGAACCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | GACTCCCAGAGAGCCCAACTGAGAGCCAGCTGTGGCTGCATATGCAAGTGTGGGTGTAAAGTGGGTTCTTaGGCTGCTGCCTTCCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: DSQRAQLRASCGCICKCGCKVGS*AAAFLS Trigger: ACTGAGGAAGGCAGCAGCCAAAGAACCCACTTTACA...CCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGGGCTCTCTGGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS GCA 90 bp | TTCTCTTCTCAGAAGCCCAGTGGACCTTCTTGTCTGGGTTGTCTGTaGCAGGGCTGGGAGATGTACAGGAAGCAGGGCTTGAAGACAGCA | + |
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Preference number: 5 (lower is better) Translates to: FSSQKPSGPSCLGCL*QGWEMYRKQGLKTA Trigger: TGCTGTCTTCAAGCCCTGCTTCCTGTACATCTCCCAGCCCTGGCACAGACAACCCAGACAAGAAGGTCCACTGGGCTTCTGAGAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | CAAGACTTTTCAGCCAGTATCCAGGTCAGGAATGTGGATCCTGGCAGTGCTGAGGCCTTCCTCAGTTGCTaGGGAGGACTTGCCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: QDFSASIQVRNVDPGSAEAFLSC*GGLALR Trigger: TCTCAGGGCAAGTCCTCCCAAGCAACTGAGGAAGGC...CTCAGCACTGCCAGGATCCACATTCCTGACCTGGATACTGGCTGAAAAGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | GTGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGACCTTCTTGTCTGGGTaGTCTGTGCCAGGGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VSLFVFCSPCPYPRLFSQTFLSG*SVPGLG Trigger: TCCCAGCCCTGGCACAGACAACCCAGACAAGAAGGT...CTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | CCAACTGAGAGCCAGCTGTGGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTTGTCCAAGTGAGTCTTaGACTCTGAGTCTGTGGACG | + |
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Preference number: 5 (lower is better) Translates to: PTESQLWLHMQVWAIQVSCPSES*TLSLWT Trigger: CGTCCACAGACTCAGAGTCAAAGACTCACTTGGACA...AGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | TGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTTGCTGCCTTCCTCAGTaGCTTGGGAGGACTTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: CLSLSSAALVHIQDFSASCCLPQ*LGRTCP Trigger: AGGGCAAGTCCTCCCAAGCAACTGAGGAAGGCAGCA...ACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS TCA 90 bp | CTGTTGCCTGGGCAGTCTTGGAGAATGGCCTCCAGCTGTGTCCTTTaGTCTTCTGTTGACAAGTCCATGAGAGCTTCCAGATCAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: LLPGQSWRMASSCVL*SSVDKSMRASRSIS Trigger: AGAGATTGATCTGGAAGCTCTCATGGACTTGTCAACAGAAGATCAAAGGACACAGCTGGAGGCCATTCTCCAAGACTGCCCAGGCAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS TCA 90 bp | CAGGATTATTTCGAAGGCCTGCTGAGTCTCCGAAGTCTCTTGAGTTaGCTGAGTAGCTCAGAGATAAAAGGCTCTCTGTTGCCTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QDYFEGLLSLRSLLS*LSSSEIKGSLLPGQ Trigger: CTGCCCAGGCAACAGAGAGCCTTTTATCTCTGAGCTACTCAGTCAACTCAAGAGACTTCGGAGACTCAGCAGGCCTTCGAAATAATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | GCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCCAGGTCAGGAATGTGATAAAAGGCTCTCTGTaGCCTGGGCAGTCTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: AALVHIQDFSASIQVRNVIKGSL*PGQSWR Trigger: TCTCCAAGACTGCCCAGGCAACAGAGAGCCTTTTAT...CACATTCCTGACCTGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS TCA 90 bp | GCAGTCTTGGAGAATGGCCTCCAGCTGTGTCCTTTGATCTTCTGTTaGCAAGTCCATGAGAGCTTCCAGATCAATCTCTGGCTCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: AVLENGLQLCPLIFC*QVHESFQINLWLRR Trigger: TCTTCTGAGCCAGAGATTGATCTGGAAGCTCTCATGGACTTGTCAACAGAAGATCAAAGGACACAGCTGGAGGCCATTCTCCAAGACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS CCA 90 bp | CAGATCAATCTCTGGCTCAGAAGATTCTTCTTGACCCTTGTAAAGTaGGTTCTTTGGCTGCTGCCTTCCTCAGTTGCTTGGGAGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: QINLWLRRFFLTLVK*VLWLLPSSVAWEDL Trigger: CAAGTCCTCCCAAGCAACTGAGGAAGGCAGCAGCCAAAGAACCCACTTTACAAGGGTCAAGAAGAATCTTCTGAGCCAGAGATTGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | GTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCCAGGTCAGCTCAGAAGATTCTTCTaGACCCTGGAAGAGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VFCSPCPYPRLFSQYPGQLRRFF*TLEEFL Trigger: CAGGAACTCTTCCAGGGTCAAGAAGAATCTTCTGAG...CTGACCTGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076084.6 |
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| CDS-3UTR CAA 90 bp | TCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTTCAGCCAGTATCCATAAAAGGCTCTCTGTaGCCTGGGCAGTCTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SLCLLQPLSISKTFQPVSIKGSL*PGQSWR Trigger: TCTCCAAGACTGCCCAGGCAACAGAGAGCCTTTTAT...GGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | CCAACTGAGAGCCAGCTGTGGCTGCATATGCAAGTGTGGGCTATACAAGTGTCTCTCAGAAGATTCTTCTaGACCCTTGTAAAGTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: PTESQLWLHMQVWAIQVSLRRFF*TLVKWV Trigger: AACCCACTTTACAAGGGTCAAGAAGAATCTTCTGAG...AGACACTTGTATAGCCCACACTTGCATATGCAGCCACAGCTGGCTCTCAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS-3UTR CAA 90 bp | GTTCCTAAAGGTTTATCTTGGCTGCTAAGGAAAAGCATTAGACAAAACTACAGCACCTTCTTGTCTGGGTaGTCTGTGCCAGGGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VPKGLSWLLRKSIRQNYSTFLSG*SVPGLG Trigger: TCCCAGCCCTGGCACAGACAACCCAGACAAGAAGGT...GCTGTAGTTTTGTCTAATGCTTTTCCTTAGCAGCCAAGATAAACCTTTAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076084.6 |
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| CDS-3UTR CAA 90 bp | GCTATACAAGTGTCTCTCTTTGTCTTCTGCAGCCCTTGTCCATATCCAAGACTTTGTCCAAGTGAGTCTTaGACTCTGAGTCTGTGGACG | + |
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Preference number: 5 (lower is better) Translates to: AIQVSLFVFCSPCPYPRLCPSES*TLSLWT Trigger: CGTCCACAGACTCAGAGTCAAAGACTCACTTGGACA...AAGTCTTGGATATGGACAAGGGCTGCAGAAGACAAAGAGAGACACTTGTATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS CAA 90 bp | GCCCTCCTTCTCTTCTCAGAAGCCCAGTGGACCTTCTTGTCTGGGTaGTCTGTGCCAGGGCTGGGAGATGTACAGGAAGCAGGGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: ALLLFSEAQWTFLSG*SVPGLGDVQEAGLE Trigger: TTCAAGCCCTGCTTCCTGTACATCTCCCAGCCCTGGCACAGACAACCCAGACAAGAAGGTCCACTGGGCTTCTGAGAAGAGAAGGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS CAA 90 bp | GTGGACGATGCCCTCCTTCTCTTCTCAGAAGCCCAGTGGACCTTCTaGTCTGGGTTGTCTGTGCCAGGGCTGGGAGATGTACAGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: VDDALLLFSEAQWTF*SGLSVPGLGDVQEA Trigger: TGCTTCCTGTACATCTCCCAGCCCTGGCACAGACAACCCAGACAAGAAGGTCCACTGGGCTTCTGAGAAGAGAAGGAGGGCATCGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS GCA 72 bp | TTTGGCTGCTGCCTTCCTCAGTTGCTTGGGAGGACTTaGCCTGAGATGTCTGGAAGAGTTCCTGGACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: FGCCLPQLLGRT*PEMSGRVPGPE Trigger: CTCAGGTCCAGGAACTCTTCCAGACATCTCAGGGCAAGTCCTCCCAAGCAACTGAGGAAGGCAGCAGCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS CAA 72 bp | CTCTTCTCAGAAGCCCAGTGGACCTTCTTGTCTGGGTaGTCTGTGCCAGGGCTGGGAGATGTACAGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LFSEAQWTFLSG*SVPGLGDVQEA Trigger: TGCTTCCTGTACATCTCCCAGCCCTGGCACAGACAACCCAGACAAGAAGGTCCACTGGGCTTCTGAGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS TCA 72 bp | GGTCTCCGGGACCTGGGCAACTTAGAAATGTCCAAGTaGGTCTTTGACTCTGAGTCTGTGGACGATGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GLRDLGNLEMSK*VFDSESVDDAL Trigger: GAGGGCATCGTCCACAGACTCAGAGTCAAAGACTCACTTGGACATTTCTAAGTTGCCCAGGTCCCGGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS CAA 90 bp | GTCCATGAGAGCTTCCAGATCAATCTCTGGCTCAGAAGATTCTTCTaGACCCTGGAAGAGTTCCTGGACCTGAGCATCTACCCACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VHESFQINLWLRRFF*TLEEFLDLSIYPLL Trigger: GAGCAGTGGGTAGATGCTCAGGTCCAGGAACTCTTCCAGGGTCAAGAAGAATCTTCTGAGCCAGAGATTGATCTGGAAGCTCTCATGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076084.6 |
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| CDS CAA 90 bp | TCTCTGGCTCAGAAGATTCTTCTTGACCCTTGTAAAGTGGGTTCTTaGGCTGCTGCCTTCCTCAGTTGCTTGGGAGGACTTGCCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SLAQKILLDPCKVGS*AAAFLSCLGGLALR Trigger: TCTCAGGGCAAGTCCTCCCAAGCAACTGAGGAAGGCAGCAGCCAAAGAACCCACTTTACAAGGGTCAAGAAGAATCTTCTGAGCCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS CCA 72 bp | CTCTGGCTCAGAAGATTCTTCTTGACCCTTGTAAAGTaGGTTCTTTGGCTGCTGCCTTCCTCAGTTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LWLRRFFLTLVK*VLWLLPSSVAW Trigger: CCAAGCAACTGAGGAAGGCAGCAGCCAAAGAACCCACTTTACAAGGGTCAAGAAGAATCTTCTGAGCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS TCA 72 bp | GAGAATGGCCTCCAGCTGTGTCCTTTGATCTTCTGTTaGCAAGTCCATGAGAGCTTCCAGATCAATCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ENGLQLCPLIFC*QVHESFQINLW Trigger: CCAGAGATTGATCTGGAAGCTCTCATGGACTTGTCAACAGAAGATCAAAGGACACAGCTGGAGGCCATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS TCA 72 bp | TTCGAAGGCCTGCTGAGTCTCCGAAGTCTCTTGAGTTaGCTGAGTAGCTCAGAGATAAAAGGCTCTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: FEGLLSLRSLLS*LSSSEIKGSLL Trigger: CAACAGAGAGCCTTTTATCTCTGAGCTACTCAGTCAACTCAAGAGACTTCGGAGACTCAGCAGGCCTTCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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| CDS CAA 72 bp | CAGAAGATTCTTCTTGACCCTTGTAAAGTGGGTTCTTaGGCTGCTGCCTTCCTCAGTTGCTTGGGAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: QKILLDPCKVGS*AAAFLSCLGGL Trigger: AAGTCCTCCCAAGCAACTGAGGAAGGCAGCAGCCAAAGAACCCACTTTACAAGGGTCAAGAAGAATCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS CAA 90 bp | GTCCATGAGAGCTTCCAGATCAATCTCTGGCTCAGAAGATTCTTCTaGACCCTTGTAAAGTGGGTTCTTTGGCTGCTGCCTTCCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VHESFQINLWLRRFF*TLVKWVLWLLPSSV Trigger: AACTGAGGAAGGCAGCAGCCAAAGAACCCACTTTACAAGGGTCAAGAAGAATCTTCTGAGCCAGAGATTGATCTGGAAGCTCTCATGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110820.3 |
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| CDS TCA 72 bp | CCAGCTGTGTCCTTTGATCTTCTGTTGACAAGTCCATaGGAGCTTCCAGATCAATCTCTGGCTCAGAAGATT | + |
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Preference number: 6 (lower is better) Translates to: PAVSFDLLLTSP*ELPDQSLAQKI Trigger: AATCTTCTGAGCCAGAGATTGATCTGGAAGCTCTCATGGACTTGTCAACAGAAGATCAAAGGACACAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076084.6 ENSMUST00000110820.3 |
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