Pregenerated sensors for PPP1R14C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040653Ensembl transcript IDs: ENSMUST00000043374.7, ENSMUST00000217573.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTCCATCTCTACATTTCGCAACACTCAGTTCACACTTCTGGACTaGTGGTACTGGCACAGAAGAGGCCAGAATCTGCTTCTAAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: SSISTFRNTQFTLLD*WYWHRRGQNLLLKR Trigger: CCTTTTTAGAAGCAGATTCTGGCCTCTTCTGTGCCAGTACCATCAGTCCAGAAGTGTGAACTGAGTGTTGCGAAATGTAGAGATGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR TCA 90 bp | AGAGAAACCAGAGATGAAACCAGACTTCTAAACCAACAAAGGTCTTaGGGGGTCTTCCATCTCTACATTTCGCAACACTCAGTTCACACT | + |
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Preference number: 1 (lower is better) Translates to: RETRDETRLLNQQRS*GVFHLYISQHSVHT Trigger: AGTGTGAACTGAGTGTTGCGAAATGTAGAGATGGAAGACCCCTCAAGACCTTTGTTGGTTTAGAAGTCTGGTTTCATCTCTGGTTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR CCA 90 bp | GCCTTGTCCATCCTTGTGGATGTACCTGCTTTGATAGTTCTTGGTTaGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTAAAATATTAC | + |
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Preference number: 1 (lower is better) Translates to: ALSILVDVPALIVLG*ATVQVVVALPLKYY Trigger: GTAATATTTTAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTATCAAAGCAGGTACATCCACAAGGATGGACAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR TCA 90 bp | CAGAATCTGCTTCTAAAAAGGAAGCTCAACCCATTGGTTTCCTTTTaGCCTGCTTTCATGGACAAAGCTAATACAGTGTATTACACTGAA | + |
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Preference number: 1 (lower is better) Translates to: QNLLLKRKLNPLVSF*PAFMDKANTVYYTE Trigger: TTCAGTGTAATACACTGTATTAGCTTTGTCCATGAAAGCAGGTCAAAAGGAAACCAATGGGTTGAGCTTCCTTTTTAGAAGCAGATTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGAAGAATGTCTGGAGACCTTTTGAAAGCACGTGTGTTGTGACCACATCTGTCCAAATCCCAGGTTaGTTTCTTCATCGCCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CLKNVWRPFESTCVVTTSVQIPG*FLHRRE Trigger: CTCTCGGCGATGAAGAAAGCAACCTGGGATTTGGAC...AGATGTGGTCACAACACACGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGAAGAATGTCTGGAGACCTTTTGAAAGCACGTGTGTTGTGACCACATCTGACAGAAAACACACCTaGCCTTGTCCATCCTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: CLKNVWRPFESTCVVTTSDRKHT*PCPSLW Trigger: CCACAAGGATGGACAAGGCCAGGTGTGTTTTCTGTC...AGATGTGGTCACAACACACGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGCTAATACAGTGTATTACACTGAAAGCAGAGAACATGTTGCTACCTGGGGTCCAAATCCCAGGTTaGTTTCTTCATCGCCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TKLIQCITLKAENMLLPGVQIPG*FLHRRE Trigger: CTCTCGGCGATGAAGAAAGCAACCTGGGATTTGGAC...CCCAGGTAGCAACATGTTCTCTGCTTTCAGTGTAATACACTGTATTAGCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR CAA 90 bp | GGCCTTGTCCATCCTTGTGGATGTACCTGCTTTGATAGTTCTTGGTaGGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTAAAATATTA | + |
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Preference number: 2 (lower is better) Translates to: GLVHPCGCTCFDSSW*GYSPSCSSFAIKIL Trigger: TAATATTTTAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTATCAAAGCAGGTACATCCACAAGGATGGACAAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGCTAATACAGTGTATTACACTGAAAGCAGAGAACATGTTGCTACCTGGGAAAGCACGTGTGTTGTaGCCACATCTAATAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TKLIQCITLKAENMLLPGKARVL*PHLIGK Trigger: CTTCCCTATTAGATGTGGTCACAACACACGTGCTTT...CCCAGGTAGCAACATGTTCTCTGCTTTCAGTGTAATACACTGTATTAGCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR CAA 90 bp | GCAGTATGGCTCATTGTAATGACAAACACACTGAATTCTTTCACTTaGTTGCAGAAAGTGGATGCTGAAGGTGGACGACATTTGTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: AVWLIVMTNTLNSFT*LQKVDAEGGRHLSE Trigger: TTCAGACAAATGTCGTCCACCTTCAGCATCCACTTTCTGCAACAAAGTGAAAGAATTCAGTGTGTTTGTCATTACAATGAGCCATACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGCTAATACAGTGTATTACACTGAAAGCAGAGAACATGTTGCTACCTGGGTATGAATTAAGCCCTTaGCCAACTCAACACATATGC | + |
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Preference number: 2 (lower is better) Translates to: TKLIQCITLKAENMLLPGYELSP*PTQHIC Trigger: GCATATGTGTTGAGTTGGTCAAGGGCTTAATTCATA...CCCAGGTAGCAACATGTTCTCTGCTTTCAGTGTAATACACTGTATTAGCTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR CCA 90 bp | CTGATTGCAAAACTGTGTTCAAAAAGTGTAGGTATTTCTTTATCAATCAGGCTGCTTTGTTGCAGAAAGTaGATGCTGAAGGTGGACGAC | + |
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Preference number: 2 (lower is better) Translates to: LIAKLCSKSVGISLSIRLLCCRK*MLKVDD Trigger: GTCGTCCACCTTCAGCATCCACTTTCTGCAACAAAG...CAGCCTGATTGATAAAGAAATACCTACACTTTTTGAACACAGTTTTGCAATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATTGCAAAACTGTGTTCAAAAAGTGTAGGTATTTCTTTATCAATCAGGCTGAAAGCACGTGTGTTGTaGCCACATCTAATAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LIAKLCSKSVGISLSIRLKARVL*PHLIGK Trigger: CTTCCCTATTAGATGTGGTCACAACACACGTGCTTT...CAGCCTGATTGATAAAGAAATACCTACACTTTTTGAACACAGTTTTGCAATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR GCA 90 bp | CAACACATATGCAGTATGGCTCATTGTAATGACAAACACACTGAATTCTTTCACCCTTGTGGATGTACCTaGTTTGATAGTTCTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: QHICSMAHCNDKHTEFFHPCGCT*FDSSWL Trigger: CAACCAAGAACTATCAAAGCAGGTACATCCACAAGG...GTGAAAGAATTCAGTGTGTTTGTCATTACAATGAGCCATACTGCATATGTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGCTAATACAGTGTATTACACTGAAAGCAGAGAACATGTTGCTACCTGGGATTCTTTCACTTTGTTaGAGAAAGTGGATGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: TKLIQCITLKAENMLLPGILSLC*RKWMLK Trigger: CTTCAGCATCCACTTTCTGCAACAAAGTGAAAGAAT...CCCAGGTAGCAACATGTTCTCTGCTTTCAGTGTAATACACTGTATTAGCTTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR CCA 90 bp | CAACACATATGCAGTATGGCTCATTGTAATGACAAACACACTGAATTCTTTCACTGTCTGAAGAATGTCTaGAGACCTTTTGAAAGCACG | + |
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Preference number: 2 (lower is better) Translates to: QHICSMAHCNDKHTEFFHCLKNV*RPFEST Trigger: CGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA...GTGAAAGAATTCAGTGTGTTTGTCATTACAATGAGCCATACTGCATATGTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR CCA 90 bp | CTGATTGCAAAACTGTGTTCAAAAAGTGTAGGTATTTCTTTATCAATCAGGCTGTGTCTGAAGAATGTCTaGAGACCTTTTGAAAGCACG | + |
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Preference number: 2 (lower is better) Translates to: LIAKLCSKSVGISLSIRLCLKNV*RPFEST Trigger: CGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA...CAGCCTGATTGATAAAGAAATACCTACACTTTTTGAACACAGTTTTGCAATCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR TCA 72 bp | TCTACATTTCGCAACACTCAGTTCACACTTCTGGACTaGTGGTACTGGCACAGAAGAGGCCAGAATCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: STFRNTQFTLLD*WYWHRRGQNLL Trigger: AAGCAGATTCTGGCCTCTTCTGTGCCAGTACCATCAGTCCAGAAGTGTGAACTGAGTGTTGCGAAATGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR CCA 72 bp | GTCCATCCTTGTGGATGTACCTGCTTTGATAGTTCTTaGTTGGGCTACAGTCCAAGTTGTAGTAGCTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: VHPCGCTCFDSS*LGYSPSCSSFA Trigger: GGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTATCAAAGCAGGTACATCCACAAGGATGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGAAGAATGTCTGGAGACCTTTTGAAAGCACGTGTGTTGTGACCACATCTAAAACACACCTGGCCTaGTCCATCCTTGTGGATGTA | + |
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Preference number: 3 (lower is better) Translates to: CLKNVWRPFESTCVVTTSKTHLA*SILVDV Trigger: TACATCCACAAGGATGGACAAGGCCAGGTGTGTTTT...AGATGTGGTCACAACACACGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR CAA 90 bp | GTGACCACATCTAATAGGGAAGCACAGGCTTATTTCATGAACCTGATACAAAGCGTGGATGTACCTGCTTaGATAGTTCTTGGTTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: VTTSNREAQAYFMNLIQSVDVPA*IVLGWA Trigger: AGCCCAACCAAGAACTATCAAAGCAGGTACATCCAC...GCTTTGTATCAGGTTCATGAAATAAGCCTGTGCTTCCCTATTAGATGTGGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR-3UTR CAA 90 bp | GTGACCACATCTAATAGGGAAGCACAGGCTTATTTCATGAACCTGATACAAAGCAAAACACACCTGGCCTaGTCCATCCTTGTGGATGTA | + |
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Preference number: 3 (lower is better) Translates to: VTTSNREAQAYFMNLIQSKTHLA*SILVDV Trigger: TACATCCACAAGGATGGACAAGGCCAGGTGTGTTTT...GCTTTGTATCAGGTTCATGAAATAAGCCTGTGCTTCCCTATTAGATGTGGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR TCA 72 bp | AGAATGTCTGGAGACCTTTTGAAAGCACGTGTGTTGTaGCCACATCTAATAGGGAAGCACAGGCTTATTTCA | + |
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Preference number: 3 (lower is better) Translates to: RMSGDLLKARVL*PHLIGKHRLIS Trigger: TGAAATAAGCCTGTGCTTCCCTATTAGATGTGGTCACAACACACGTGCTTTCAAAAGGTCTCCAGACATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR TCA 72 bp | AGAGATGAAACCAGACTTCTAAACCAACAAAGGTCTTaGGGGGTCTTCCATCTCTACATTTCGCAACACTCA | + |
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Preference number: 3 (lower is better) Translates to: RDETRLLNQQRS*GVFHLYISQHS Trigger: TGAGTGTTGCGAAATGTAGAGATGGAAGACCCCTCAAGACCTTTGTTGGTTTAGAAGTCTGGTTTCATCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR CCA 72 bp | ATCCTTGTGGATGTACCTGCTTTGATAGTTCTTGGTTaGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTA | + |
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Preference number: 3 (lower is better) Translates to: ILVDVPALIVLG*ATVQVVVALPL Trigger: TAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTATCAAAGCAGGTACATCCACAAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR TCA 72 bp | CAAACTGACCATAAGAAAACCATCTTCCCTGTATTGTaGGATCCTAAATTACAGCCGAGTCCTGACAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: QTDHKKTIFPVL*DPKLQPSPDRK Trigger: TTTTCTGTCAGGACTCGGCTGTAATTTAGGATCTCACAATACAGGGAAGATGGTTTTCTTATGGTCAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR TCA 72 bp | CTTCTAAAAAGGAAGCTCAACCCATTGGTTTCCTTTTaGCCTGCTTTCATGGACAAAGCTAATACAGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: LLKRKLNPLVSF*PAFMDKANTVY Trigger: ATACACTGTATTAGCTTTGTCCATGAAAGCAGGTCAAAAGGAAACCAATGGGTTGAGCTTCCTTTTTAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR TCA 90 bp | TGTCTGAAGAATGTCTGGAGACCTTTTGAAAGCACGTGTGTTGTGACCACATCTCGCCGAGTCCTCCCTTaGGGAGCCGGAGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CLKNVWRPFESTCVVTTSRRVLP*GAGAAA Trigger: AGCAGCAGCTCCGGCTCCTCAAGGGAGGACTCGGCG...AGATGTGGTCACAACACACGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR GCA 90 bp | TGTCTGAAGAATGTCTGGAGACCTTTTGAAAGCACGTGTGTTGTGACCACATCTAGGAGCCGGAGCTGCTaGTGGATCCTGGGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CLKNVWRPFESTCVVTTSRSRSC*WILGCR Trigger: GCGGCAGCCCAGGATCCAGCAGCAGCTCCGGCTCCT...AGATGTGGTCACAACACACGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGCTAATACAGTGTATTACACTGAAAGCAGAGAACATGTTGCTACCTGGGCGCCGAGTCCTCCCTTaGGGAGCCGGAGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TKLIQCITLKAENMLLPGRRVLP*GAGAAA Trigger: AGCAGCAGCTCCGGCTCCTCAAGGGAGGACTCGGCG...CCCAGGTAGCAACATGTTCTCTGCTTTCAGTGTAATACACTGTATTAGCTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR TCA 90 bp | TGTCTGAAGAATGTCTGGAGACCTTTTGAAAGCACGTGTGTTGTGACCACATCTTCGCAGCCGTACAGCTaGCCCAGCTGCTCCACGATC | + |
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Preference number: 4 (lower is better) Translates to: CLKNVWRPFESTCVVTTSSQPYS*PSCSTI Trigger: GATCGTGGAGCAGCTGGGTCAGCTGTACGGCTGCGA...AGATGTGGTCACAACACACGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR TCA 90 bp | GTGACCACATCTAATAGGGAAGCACAGGCTTATTTCATGAACCTGATACAAAGCTCGCAGCCGTACAGCTaGCCCAGCTGCTCCACGATC | + |
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Preference number: 4 (lower is better) Translates to: VTTSNREAQAYFMNLIQSSQPYS*PSCSTI Trigger: GATCGTGGAGCAGCTGGGTCAGCTGTACGGCTGCGA...GCTTTGTATCAGGTTCATGAAATAAGCCTGTGCTTCCCTATTAGATGTGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR GCA 90 bp | GTGACCACATCTAATAGGGAAGCACAGGCTTATTTCATGAACCTGATACAAAGCTTGAGGAGCCGGAGCTaGTGCTGGATCCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTTSNREAQAYFMNLIQSLRSRS*CWILGC Trigger: GCAGCCCAGGATCCAGCAGCAGCTCCGGCTCCTCAA...GCTTTGTATCAGGTTCATGAAATAAGCCTGTGCTTCCCTATTAGATGTGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR CCA 90 bp | CAACACATATGCAGTATGGCTCATTGTAATGACAAACACACTGAATTCTTTCACAGCCGGAGCTGCTGCTaGATCCTGGGCTGCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: QHICSMAHCNDKHTEFFHSRSCC*ILGCRR Trigger: CCGGCGGCAGCCCAGGATCCAGCAGCAGCTCCGGCT...GTGAAAGAATTCAGTGTGTTTGTCATTACAATGAGCCATACTGCATATGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR CCA 90 bp | ATAGTTCTTGGTTGGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTAAAATATAGCCGGAGCTGCTGCTaGATCCTGGGCTGCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: IVLGWATVQVVVALPLKYSRSCC*ILGCRR Trigger: CCGGCGGCAGCCCAGGATCCAGCAGCAGCTCCGGCT...ATATTTTAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR GCA 90 bp | ATAGTTCTTGGTTGGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTAAAATATAGGAGCCGGAGCTGCTaGTGGATCCTGGGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IVLGWATVQVVVALPLKYRSRSC*WILGCR Trigger: GCGGCAGCCCAGGATCCAGCAGCAGCTCCGGCTCCT...ATATTTTAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| 3UTR CAA 72 bp | CACCTGGCCTTGTCCATCCTTGTGGATGTACCTGCTTaGATAGTTCTTGGTTGGGCTACAGTCCAAGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: HLALSILVDVPA*IVLGWATVQVV Trigger: TACAACTTGGACTGTAGCCCAACCAAGAACTATCAAAGCAGGTACATCCACAAGGATGGACAAGGCCAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR GCA 90 bp | ATAGTTCTTGGTTGGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTAAAATATTTGAGGAGCCGGAGCTaGTGCTGGATCCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IVLGWATVQVVVALPLKYLRSRS*CWILGC Trigger: GCAGCCCAGGATCCAGCAGCAGCTCCGGCTCCTCAA...ATATTTTAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR CCA 90 bp | TGTCTGAAGAATGTCTGGAGACCTTTTGAAAGCACGTGTGTTGTGACCACATCTACTTTTCCCTGCTGGTaGCGTCGTTGTTGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: CLKNVWRPFESTCVVTTSTFPCW*RRCCCC Trigger: GCAACAGCAACAACGACGCCACCAGCAGGGAAAAGT...AGATGTGGTCACAACACACGTGCTTTCAAAAGGTCTCCAGACATTCTTCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR GCA 90 bp | ATAGTTCTTGGTTGGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTAAAATATGGCTCAGCTTCCTCATaGCTCTTATCCGGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: IVLGWATVQVVVALPLKYGSASS*LLSGRA Trigger: TGCTCTCCCGGATAAGAGGCATGAGGAAGCTGAGCC...ATATTTTAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR GCA 90 bp | CAACACATATGCAGTATGGCTCATTGTAATGACAAACACACTGAATTCTTTCACCATACGCTCTTCTTCTaGGGAGGGCTCAGCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QHICSMAHCNDKHTEFFHHTLFF*GGLSFL Trigger: GAGGAAGCTGAGCCCTCCGCAGAAGAAGAGCGTATG...GTGAAAGAATTCAGTGTGTTTGTCATTACAATGAGCCATACTGCATATGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR GCA 90 bp | ATAGTTCTTGGTTGGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTAAAATATCATACGCTCTTCTTCTaGGGAGGGCTCAGCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: IVLGWATVQVVVALPLKYHTLFF*GGLSFL Trigger: GAGGAAGCTGAGCCCTCCGCAGAAGAAGAGCGTATG...ATATTTTAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR CCA 90 bp | CAACACATATGCAGTATGGCTCATTGTAATGACAAACACACTGAATTCTTTCACACTTTTCCCTGCTGGTaGCGTCGTTGTTGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QHICSMAHCNDKHTEFFHTFPCW*RRCCCC Trigger: GCAACAGCAACAACGACGCCACCAGCAGGGAAAAGT...GTGAAAGAATTCAGTGTGTTTGTCATTACAATGAGCCATACTGCATATGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR CCA 90 bp | ATAGTTCTTGGTTGGGCTACAGTCCAAGTTGTAGTAGCTTTGCCATTAAAATATTTTCCTCCTCGCTGTTaGCATCAAGAAGATCATCAA | + |
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Preference number: 4 (lower is better) Translates to: IVLGWATVQVVVALPLKYFPPRC*HQEDHQ Trigger: TTGATGATCTTCTTGATGCCAACAGCGAGGAGGAAA...ATATTTTAATGGCAAAGCTACTACAACTTGGACTGTAGCCCAACCAAGAACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043374.7 |
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| CDS-3UTR CCA 90 bp | CTGATTGCAAAACTGTGTTCAAAAAGTGTAGGTATTTCTTTATCAATCAGGCTGGATGAATTCCTCTGTTaGTTTATAGCAGTCTACGAG | + |
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Preference number: 4 (lower is better) Translates to: LIAKLCSKSVGISLSIRLDEFLC*FIAVYE Trigger: CTCGTAGACTGCTATAAACCAACAGAGGAATTCATC...CAGCCTGATTGATAAAGAAATACCTACACTTTTTGAACACAGTTTTGCAATCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043374.7 |
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| CDS TCA 90 bp | TTGCCCGGCGGCGGCCACCGTAGTCACCGGCGCCGAGTCCTCCCTTaGGGAGCCGGAGCTGCTGCTGGATCCTGGGCTGCCGCCGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LPGGGHRSHRRRVLP*GAGAAAGSWAAAGS Trigger: GGAACCGGCGGCAGCCCAGGATCCAGCAGCAGCTCCGGCTCCTCAAGGGAGGACTCGGCGCCGGTGACTACGGTGGCCGCCGCCGGGCAA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS GCA 90 bp | CCGAGTCCTCCCTTGAGGAGCCGGAGCTGCTGCTGGATCCTGGGCTaGCGCCGGTTCCACCGCGGGGACTCTGGAAGAAGACACGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: PSPPLRSRSCCWILG*RRFHRGDSGRRHAH Trigger: GTGCGCGTGTCTTCTTCCAGAGTCCCCGCGGTGGAACCGGCGGCAGCCCAGGATCCAGCAGCAGCTCCGGCTCCTCAAGGGAGGACTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS GCA 90 bp | TATTTCACTGTCACTTTTCCCTGCTGGTGGCGTCGTTGTTGCTGTTaGACTTGCCCGGCGGCGGCCACCGTAGTCACCGGCGCCGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: YFTVTFPCWWRRCCC*TCPAAATVVTGAES Trigger: GGACTCGGCGCCGGTGACTACGGTGGCCGCCGCCGGGCAAGTGCAACAGCAACAACGACGCCACCAGCAGGGAAAAGTGACAGTGAAATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS TCA 90 bp | ATCCGGGAGAGCAGCTCTCTGATGAATTCCTCGCAGCCGTACAGCTaGCCCAGCTGCTCCACGATCCATTCTTCCAGCACCAACCGCTTA | + |
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Preference number: 5 (lower is better) Translates to: IRESSSLMNSSQPYS*PSCSTIHSSSTNRL Trigger: TAAGCGGTTGGTGCTGGAAGAATGGATCGTGGAGCAGCTGGGTCAGCTGTACGGCTGCGAGGAATTCATCAGAGAGCTGCTCTCCCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217573.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGCTAATACAGTGTATTACACTGAAAGCAGAGAACATGTTGCTACCTGGGCTGCTGGTGGCGTCGTaGTTGCTGTTGCACTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TKLIQCITLKAENMLLPGLLVAS*LLLHLP Trigger: GGGCAAGTGCAACAGCAACAACGACGCCACCAGCAG...CCCAGGTAGCAACATGTTCTCTGCTTTCAGTGTAATACACTGTATTAGCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS-3UTR CAA 90 bp | CTGATTGCAAAACTGTGTTCAAAAAGTGTAGGTATTTCTTTATCAATCAGGCTGCTGCTGGTGGCGTCGTaGTTGCTGTTGCACTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LIAKLCSKSVGISLSIRLLLVAS*LLLHLP Trigger: GGGCAAGTGCAACAGCAACAACGACGCCACCAGCAG...CAGCCTGATTGATAAAGAAATACCTACACTTTTTGAACACAGTTTTGCAATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS CCA 90 bp | CTACGAGAGCTTCCTGTAATTTCGAAGCTCTTTCCTCCTCGCTGTTaGCATCAAGAAGATCATCAATGTCAATTTCTACATCTGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: LRELPVISKLFPPRC*HQEDHQCQFLHLAF Trigger: AAATGCCAGATGTAGAAATTGACATTGATGATCTTCTTGATGCCAACAGCGAGGAGGAAAGAGCTTCGAAATTACAGGAAGCTCTCGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043374.7 |
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| CDS-3UTR CAA 90 bp | CTGATTGCAAAACTGTGTTCAAAAAGTGTAGGTATTTCTTTATCAATCAGGCTGCTTTCCTCCTCGCTGTaGGCATCAAGAAGATCATCA | + |
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Preference number: 5 (lower is better) Translates to: LIAKLCSKSVGISLSIRLLSSSL*ASRRSS Trigger: TGATGATCTTCTTGATGCCAACAGCGAGGAGGAAAG...CAGCCTGATTGATAAAGAAATACCTACACTTTTTGAACACAGTTTTGCAATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043374.7 |
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| CDS GCA 72 bp | CCCTTGAGGAGCCGGAGCTGCTGCTGGATCCTGGGCTaGCGCCGGTTCCACCGCGGGGACTCTGGAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PLRSRSCCWILG*RRFHRGDSGRR Trigger: TCTTCTTCCAGAGTCCCCGCGGTGGAACCGGCGGCAGCCCAGGATCCAGCAGCAGCTCCGGCTCCTCAAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS CAA 72 bp | TTTTCCCTGCTGGTGGCGTCGTTGTTGCTGTTGCACTaGCCCGGCGGCGGCCACCGTAGTCACCGGCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: FSLLVASLLLLH*PGGGHRSHRRR Trigger: TCGGCGCCGGTGACTACGGTGGCCGCCGCCGGGCAAGTGCAACAGCAACAACGACGCCACCAGCAGGGAAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS GCA 72 bp | GTCACTTTTCCCTGCTGGTGGCGTCGTTGTTGCTGTTaGACTTGCCCGGCGGCGGCCACCGTAGTCACCGGC | + |
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Preference number: 6 (lower is better) Translates to: VTFPCWWRRCCC*TCPAAATVVTG Trigger: GCCGGTGACTACGGTGGCCGCCGCCGGGCAAGTGCAACAGCAACAACGACGCCACCAGCAGGGAAAAGTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS CAA 72 bp | TGTCACTTTTCCCTGCTGGTGGCGTCGTTGTTGCTGTaGCACTTGCCCGGCGGCGGCCACCGTAGTCACCGG | + |
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Preference number: 6 (lower is better) Translates to: CHFSLLVASLLL*HLPGGGHRSHR Trigger: CCGGTGACTACGGTGGCCGCCGCCGGGCAAGTGCAACAGCAACAACGACGCCACCAGCAGGGAAAAGTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS CAA 90 bp | GTATTTCACTGTCACTTTTCCCTGCTGGTGGCGTCGTTGTTGCTGTaGCACTTGCCCGGCGGCGGCCACCGTAGTCACCGGCGCCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: VFHCHFSLLVASLLL*HLPGGGHRSHRRRV Trigger: GACTCGGCGCCGGTGACTACGGTGGCCGCCGCCGGGCAAGTGCAACAGCAACAACGACGCCACCAGCAGGGAAAAGTGACAGTGAAATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043374.7 ENSMUST00000217573.2 |
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| CDS TCA 72 bp | AGCAGCTCTCTGATGAATTCCTCGCAGCCGTACAGCTaGCCCAGCTGCTCCACGATCCATTCTTCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SSSLMNSSQPYS*PSCSTIHSSST Trigger: GGTGCTGGAAGAATGGATCGTGGAGCAGCTGGGTCAGCTGTACGGCTGCGAGGAATTCATCAGAGAGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217573.2 |
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