Pregenerated sensors for PPP1R14A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037166Ensembl transcript IDs: ENSMUST00000048187.6, ENSMUST00000207714.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTGGCCTTCCCTAGGAGCTGGGACTGGGTCCATATGGGGGAGGTaGGGACAGGATGTGAGTCTCCAGGACGCCTCAGGGTCAGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: PWPSLGAGTGSIWGR*GQDVSLQDASGSVG Trigger: CCCTACTGACCCTGAGGCGTCCTGGAGACTCACATCCTGTCCCCACCTCCCCCATATGGACCCAGTCCCAGCTCCTAGGGAAGGCCAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CCA 90 bp | TGGCCAGGAGGAATGTTTCTCCGTCTGTCAGGGCCAGCTGTGGCTTaGGGGACCAAGGACAAGGGGCTGCAGAAGGCCAGGGTAATGGGG | + |
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Preference number: 1 (lower is better) Translates to: WPGGMFLRLSGPAVA*GTKDKGLQKARVMG Trigger: CCCCATTACCCTGGCCTTCTGCAGCCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCCTGACAGACGGAGAAACATTCCTCCTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CCA 90 bp | TCATCGCTGTGTGATGCCCTATGGGAAGATGACAGAGGGTCACAGTaGGCCGTGCACATCCCCCGTGACCCTGAAGGCCAGGGGATCTGG | + |
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Preference number: 1 (lower is better) Translates to: SSLCDALWEDDRGSQ*AVHIPRDPEGQGIW Trigger: CCAGATCCCCTGGCCTTCAGGGTCACGGGGGATGTGCACGGCCCACTGTGACCCTCTGTCATCTTCCCATAGGGCATCACACAGCGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CCA 90 bp | TCTCCAGGACGCCTCAGGGTCAGTAGGGTATGTTCTCAGGCTCTGTaGCCAGGAGGAATGTTTCTCCGTCTGTCAGGGCCAGCTGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SPGRLRVSRVCSQAL*PGGMFLRLSGPAVA Trigger: AGCCACAGCTGGCCCTGACAGACGGAGAAACATTCCTCCTGGCCACAGAGCCTGAGAACATACCCTACTGACCCTGAGGCGTCCTGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR GCA 90 bp | GTGAAAAGGCAGCTCTGTGGTTGCTCTGTGGTTAAGAGCAGTGGCTaGTCTTCCAGAGGATCCGAGTTCGGTTCCCAGCAGCCACATGGC | + |
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Preference number: 1 (lower is better) Translates to: VKRQLCGCSVVKSSG*SSRGSEFGSQQPHG Trigger: GCCATGTGGCTGCTGGGAACCGAACTCGGATCCTCTGGAAGAGCAGCCACTGCTCTTAACCACAGAGCAACCACAGAGCTGCCTTTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTATGGGAAGATGACAGAGGGTCACAGTGGGCCGTGCACATCCCCCGTGACCTCTGGGCTTTGGGGGTaGAGCGCAGAGGCGGGCGCA | + |
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Preference number: 2 (lower is better) Translates to: PYGKMTEGHSGPCTSPVTSGLWG*SAEAGA Trigger: TGCGCCCGCCTCTGCGCTCCACCCCCAAAGCCCAGA...GGTCACGGGGGATGTGCACGGCCCACTGTGACCCTCTGTCATCTTCCCATAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CAA 90 bp | GTGGCCAGGAGGAATGTTTCTCCGTCTGTCAGGGCCAGCTGTGGCTaGGGGGACCAAGGACAAGGGGCTGCAGAAGGCCAGGGTAATGGG | + |
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Preference number: 2 (lower is better) Translates to: VARRNVSPSVRASCG*GDQGQGAAEGQGNG Trigger: CCCATTACCCTGGCCTTCTGCAGCCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCCTGACAGACGGAGAAACATTCCTCCTGGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGTGGGGACAGGATGTGAGTCTCCAGGACGCCTCAGGGTCAGTAGGGTATGTCAGGGCCAGCTGTaGCTTGGGGGACCAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: GEVGTGCESPGRLRVSRVCQGQL*LGGPRT Trigger: TGTCCTTGGTCCCCCAAGCCACAGCTGGCCCTGACA...TACCCTACTGACCCTGAGGCGTCCTGGAGACTCACATCCTGTCCCCACCTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCCAGGAGGAATGTTTCTCCGTCTGTCAGGGCCAGCTGTGGCTTGGGGGAAAACAATCTGGGCTTTaGGGGTGGAGCGCAGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: CGQEECFSVCQGQLWLGGKQSGL*GWSAEA Trigger: CGCCTCTGCGCTCCACCCCCAAAGCCCAGATTGTTT...TCCCCCAAGCCACAGCTGGCCCTGACAGACGGAGAAACATTCCTCCTGGCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTATGGGAAGATGACAGAGGGTCACAGTGGGCCGTGCACATCCCCCGTGACCTCCATATGGGGGAGGTaGGGACAGGATGTGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PYGKMTEGHSGPCTSPVTSIWGR*GQDVSL Trigger: GAGACTCACATCCTGTCCCCACCTCCCCCATATGGA...GGTCACGGGGGATGTGCACGGCCCACTGTGACCCTCTGTCATCTTCCCATAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCTCAGCTCATACAGTTACACCAAGCACACTCTCCATAGAGCGGACTAATGGGCCAGCTGTGGCTTaGGGGACCAAGGACAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VASAHTVTPSTLSIERTNGPAVA*GTKDKG Trigger: CCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCC...ATTAGTCCGCTCTATGGAGAGTGTGCTTGGTGTAACTGTATGAGCTGAGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR-3UTR GCA 90 bp | CTCACAACTGTCTGTAACACCAGCTCCAATGGATCTGAGCCCTCTTCTGGCCTTACCAGGCATGTGTGGTaGACAGGCATACATGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LTTVCNTSSNGSEPSSGLTRHVW*TGIHAD Trigger: GTCTGCATGTATGCCTGTGCACCACACATGCCTGGT...AAGGCCAGAAGAGGGCTCAGATCCATTGGAGCTGGTGTTACAGACAGTTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| 3UTR CCA 72 bp | TCCCTAGGAGCTGGGACTGGGTCCATATGGGGGAGGTaGGGACAGGATGTGAGTCTCCAGGACGCCTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SLGAGTGSIWGR*GQDVSLQDASG Trigger: CCCTGAGGCGTCCTGGAGACTCACATCCTGTCCCCACCTCCCCCATATGGACCCAGTCCCAGCTCCTAGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CCA 72 bp | GGAATGTTTCTCCGTCTGTCAGGGCCAGCTGTGGCTTaGGGGACCAAGGACAAGGGGCTGCAGAAGGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GMFLRLSGPAVA*GTKDKGLQKAR Trigger: CCTGGCCTTCTGCAGCCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCCTGACAGACGGAGAAACATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CCA 72 bp | CAGGAGGAATGTTTCTCCGTCTGTCAGGGCCAGCTGTaGCTTGGGGGACCAAGGACAAGGGGCTGCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: QEECFSVCQGQL*LGGPRTRGCRR Trigger: CCTTCTGCAGCCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCCTGACAGACGGAGAAACATTCCTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CCA 72 bp | CGCCTCAGGGTCAGTAGGGTATGTTCTCAGGCTCTGTaGCCAGGAGGAATGTTTCTCCGTCTGTCAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RLRVSRVCSQAL*PGGMFLRLSGP Trigger: TGGCCCTGACAGACGGAGAAACATTCCTCCTGGCCACAGAGCCTGAGAACATACCCTACTGACCCTGAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CCA 72 bp | AGCGGACTAATGGCCTCATCGCTGTGTGATGCCCTATaGGAAGATGACAGAGGGTCACAGTGGGCCGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SGLMASSLCDAL*EDDRGSQWAVH Trigger: GTGCACGGCCCACTGTGACCCTCTGTCATCTTCCCATAGGGCATCACACAGCGATGAGGCCATTAGTCCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR GCA 72 bp | CAGCTCTGTGGTTGCTCTGTGGTTAAGAGCAGTGGCTaGTCTTCCAGAGGATCCGAGTTCGGTTCCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: QLCGCSVVKSSG*SSRGSEFGSQQ Trigger: CTGCTGGGAACCGAACTCGGATCCTCTGGAAGAGCAGCCACTGCTCTTAACCACAGAGCAACCACAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| 3UTR CCA 72 bp | TTCTCTCCCACTTTAATGCTATGTTCCGCTGTTCTGTaGCCTCAGCTCATACAGTTACACCAAGCACACTCT | + |
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Preference number: 3 (lower is better) Translates to: FSPTLMLCSAVL*PQLIQLHQAHS Trigger: AGAGTGTGCTTGGTGTAACTGTATGAGCTGAGGCCACAGAACAGCGGAACATAGCATTAAAGTGGGAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR TCA 90 bp | GGGTCACAGTGGGCCGTGCACATCCCCCGTGACCCTGAAGGCCAGGGGATCTGGCAGGCTGGGGTCATCTaGGGGGCTGGGCTGCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GSQWAVHIPRDPEGQGIWQAGVI*GAGLRE Trigger: TTCCCGCAGCCCAGCCCCTCAGATGACCCCAGCCTG...CCAGATCCCCTGGCCTTCAGGGTCACGGGGGATGTGCACGGCCCACTGTGACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR CCA 90 bp | TCAGGGCCAGCTGTGGCTTGGGGGACCAAGGACAAGGGGCTGCAGAAGGCCAGGGGCGGGGGCTCAGGCTaGGGTCATCTGAGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SGPAVAWGTKDKGLQKARGGGSG*GHLRGW Trigger: CCAGCCCCTCAGATGACCCCAGCCTGAGCCCCCGCC...CCTGGCCTTCTGCAGCCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCCTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR GCA 90 bp | GGGGAGGTGGGGACAGGATGTGAGTCTCCAGGACGCCTCAGGGTCAGTAGGGTAACCGTGACTCGCGCGTaGCGCTTCTGCAGCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: GEVGTGCESPGRLRVSRVTVTRA*RFCSPL Trigger: CAGCGGGCTGCAGAAGCGGCACGCGCGAGTCACGGT...TACCCTACTGACCCTGAGGCGTCCTGGAGACTCACATCCTGTCCCCACCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR CCA 90 bp | TGTGGCCAGGAGGAATGTTTCTCCGTCTGTCAGGGCCAGCTGTGGCTTGGGGGAGGTCATCTGAGGGGCTaGGCTGCGGGAAGCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: CGQEECFSVCQGQLWLGGGHLRG*AAGSPA Trigger: AGCCGGGCTTCCCGCAGCCCAGCCCCTCAGATGACC...TCCCCCAAGCCACAGCTGGCCCTGACAGACGGAGAAACATTCCTCCTGGCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR GCA 90 bp | GGACAGGATGTGAGTCTCCAGGACGCCTCAGGGTCAGTAGGGTATGTTCTCAGGGCCCGCGACGGGGACTaGAGCTTGCTCAGCACGCGC | + |
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Preference number: 4 (lower is better) Translates to: GQDVSLQDASGSVGYVLRARDGD*SLLSTR Trigger: GCGCGTGCTGAGCAAGCTGCAGTCCCCGTCGCGGGC...CCTGAGAACATACCCTACTGACCCTGAGGCGTCCTGGAGACTCACATCCTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR GCA 90 bp | CGAGTTCGGTTCCCAGCAGCCACATGGCAGCTCACAACTGTCTGTAACACCAGCACCGTGACTCGCGCGTaGCGCTTCTGCAGCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: RVRFPAATWQLTTVCNTSTVTRA*RFCSPL Trigger: CAGCGGGCTGCAGAAGCGGCACGCGCGAGTCACGGT...GCTGGTGTTACAGACAGTTGTGAGCTGCCATGTGGCTGCTGGGAACCGAACTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR GCA 90 bp | CGGTTCCCAGCAGCCACATGGCAGCTCACAACTGTCTGTAACACCAGCTCCAATTGCTCAGCACGCGCTTaGCCAGCCGCTGCGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RFPAATWQLTTVCNTSSNCSARA*PAAAQP Trigger: TGGCTGCGCAGCGGCTGGGCAAGCGCGTGCTGAGCA...ATTGGAGCTGGTGTTACAGACAGTTGTGAGCTGCCATGTGGCTGCTGGGAACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR GCA 90 bp | GGTATGTTCTCAGGCTCTGTGGCCAGGAGGAATGTTTCTCCGTCTGTCAGGGCCACGTCCAGCCGTCGCTaGAGCTCCCGTCGGTCGTAC | + |
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Preference number: 4 (lower is better) Translates to: GMFSGSVARRNVSPSVRATSSRR*SSRRSY Trigger: GTACGACCGACGGGAGCTGCAGCGACGGCTGGACGT...GGCCCTGACAGACGGAGAAACATTCCTCCTGGCCACAGAGCCTGAGAACATACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR GCA 90 bp | GTCAGGGCCAGCTGTGGCTTGGGGGACCAAGGACAAGGGGCTGCAGAAGGCCAGGTCCTCTGTGGGATTTaGACAAGCCTCCAGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VRASCGLGDQGQGAAEGQVLCGI*TSLQKS Trigger: GGACTTCTGGAGGCTTGTGCAAATCCCACAGAGGAC...CTGGCCTTCTGCAGCCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| 3UTR CAA 72 bp | AGGAATGTTTCTCCGTCTGTCAGGGCCAGCTGTGGCTaGGGGGACCAAGGACAAGGGGCTGCAGAAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RNVSPSVRASCG*GDQGQGAAEGQ Trigger: CTGGCCTTCTGCAGCCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCCTGACAGACGGAGAAACATTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR TCA 90 bp | AGAGGATCCGAGTTCGGTTCCCAGCAGCCACATGGCAGCTCACAACTGTCTGTACTCGTCCGGCATGTCTaGCTCCCTGCCGCGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: RGSEFGSQQPHGSSQLSVLVRHV*LPAAVQ Trigger: CTGTACCGCGGCAGGGAGTCAGACATGCCGGACGAG...TACAGACAGTTGTGAGCTGCCATGTGGCTGCTGGGAACCGAACTCGGATCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR GCA 90 bp | CAGCTCACAACTGTCTGTAACACCAGCTCCAATGGATCTGAGCCCTCTTCTGGCACGGGGACTGCAGCTTaGTCAGCACGCGCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QLTTVCNTSSNGSEPSSGTGTAA*SARACP Trigger: TGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCCCCGT...GCCAGAAGAGGGCTCAGATCCATTGGAGCTGGTGTTACAGACAGTTGTGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR GCA 90 bp | TCACAACTGTCTGTAACACCAGCTCCAATGGATCTGAGCCCTCTTCTGGCCTTCACGTCCAGCCGTCGCTaGAGCTCCCGTCGGTCGTAC | + |
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Preference number: 4 (lower is better) Translates to: SQLSVTPAPMDLSPLLAFTSSRR*SSRRSY Trigger: GTACGACCGACGGGAGCTGCAGCGACGGCTGGACGT...GAAGGCCAGAAGAGGGCTCAGATCCATTGGAGCTGGTGTTACAGACAGTTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR GCA 90 bp | GGTAATGGGGAGAGGAAAATCCGGACACCAGAGGCAGTTACAGAACCATTAAATTGCTCAGCACGCGCTTaGCCAGCCGCTGCGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GNGERKIRTPEAVTEPLNCSARA*PAAAQP Trigger: TGGCTGCGCAGCGGCTGGGCAAGCGCGTGCTGAGCA...ATTTAATGGTTCTGTAACTGCCTCTGGTGTCCGGATTTTCCTCTCCCCATTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR GCA 90 bp | CGAGTTCGGTTCCCAGCAGCCACATGGCAGCTCACAACTGTCTGTAACACCAGCGAGCTCTGTGGGATTTaGACAAGCCTCCAGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RVRFPAATWQLTTVCNTSELCGI*TSLQKS Trigger: GGACTTCTGGAGGCTTGTGCAAATCCCACAGAGCTC...GCTGGTGTTACAGACAGTTGTGAGCTGCCATGTGGCTGCTGGGAACCGAACTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR TCA 90 bp | CAGCTCACAACTGTCTGTAACACCAGCTCCAATGGATCTGAGCCCTCTTCTGGCGAGAGACAAAGACCCTaGTCCGAGAGAGACACAGGC | + |
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Preference number: 4 (lower is better) Translates to: QLTTVCNTSSNGSEPSSGERQRP*SERDTG Trigger: GCCTGTGTCTCTCTCGGATCAGGGTCTTTGTCTCTC...GCCAGAAGAGGGCTCAGATCCATTGGAGCTGGTGTTACAGACAGTTGTGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR TCA 90 bp | ACTTTAATGCTATGTTCCGCTGTTCTGTGGCCTCAGCTCATACAGTTACACCAACTCGTCCGGCATGTCTaGCTCCCTGCCGCGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: TLMLCSAVLWPQLIQLHQLVRHV*LPAAVQ Trigger: CTGTACCGCGGCAGGGAGTCAGACATGCCGGACGAG...TTGGTGTAACTGTATGAGCTGAGGCCACAGAACAGCGGAACATAGCATTAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR TCA 90 bp | AGCTCACAACTGTCTGTAACACCAGCTCCAATGGATCTGAGCCCTCTTCTGGCCAGATGTTTCTCAGGCTaGGAGACAGTCCCCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: SSQLSVTPAPMDLSPLLARCFSG*ETVPRD Trigger: GTCTCTGGGGACTGTCTCTCAGCCTGAGAAACATCT...GGCCAGAAGAGGGCTCAGATCCATTGGAGCTGGTGTTACAGACAGTTGTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR GCA 90 bp | GGTAATGGGGAGAGGAAAATCCGGACACCAGAGGCAGTTACAGAACCATTAAATACGGGGACTGCAGCTTaGTCAGCACGCGCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GNGERKIRTPEAVTEPLNTGTAA*SARACP Trigger: TGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCCCCGT...ATTTAATGGTTCTGTAACTGCCTCTGGTGTCCGGATTTTCCTCTCCCCATTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR GCA 90 bp | ACTTTAATGCTATGTTCCGCTGTTCTGTGGCCTCAGCTCATACAGTTACACCAATCTGAGGGGCTGGGCTaGGGGAAGCCCGGCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: TLMLCSAVLWPQLIQLHQSEGLG*GKPGCL Trigger: CAAACAGCCGGGCTTCCCGCAGCCCAGCCCCTCAGA...TTGGTGTAACTGTATGAGCTGAGGCCACAGAACAGCGGAACATAGCATTAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR CCA 90 bp | CAGCTCACAACTGTCTGTAACACCAGCTCCAATGGATCTGAGCCCTCTTCTGGCAGACACAGGCTCAGATaGAAGAGGGAGATGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QLTTVCNTSSNGSEPSSGRHRLR*KREMFL Trigger: GAGAAACATCTCCCTCTTCCATCTGAGCCTGTGTCT...GCCAGAAGAGGGCTCAGATCCATTGGAGCTGGTGTTACAGACAGTTGTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR CAA 90 bp | GGGCCAGCTGTGGCTTGGGGGACCAAGGACAAGGGGCTGCAGAAGGCCAGGGTAGACGGGGACTGCAGCTaGCTCAGCACGCGCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GPAVAWGTKDKGLQKARVDGDCS*LSTRLP Trigger: GGGCAAGCGCGTGCTGAGCAAGCTGCAGTCCCCGTC...TACCCTGGCCTTCTGCAGCCCCTTGTCCTTGGTCCCCCAAGCCACAGCTGGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS-3UTR CAA 90 bp | CCCTATGGGAAGATGACAGAGGGTCACAGTGGGCCGTGCACATCCCCCGTGACCTTGCTCAGCACGCGCTaGCCCAGCCGCTGCGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PYGKMTEGHSGPCTSPVTLLSTR*PSRCAA Trigger: GGCTGCGCAGCGGCTGGGCAAGCGCGTGCTGAGCAA...GGTCACGGGGGATGTGCACGGCCCACTGTGACCCTCTGTCATCTTCCCATAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS GCA 90 bp | TCCTCCAAGCATCCGTCGATCCACTTCTCCACGTCCAGCCGTCGCTaGAGCTCCCGTCGGTCGTACTTGACCGTGACTCGCGCGTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: SSKHPSIHFSTSSRR*SSRRSYLTVTRACR Trigger: GCGGCACGCGCGAGTCACGGTCAAGTACGACCGACGGGAGCTGCAGCGACGGCTGGACGTGGAGAAGTGGATCGACGGATGCTTGGAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048187.6 ENSMUST00000207714.2 |
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| CDS-3UTR CAA 90 bp | GAGCCCTCTTCTGGCCTTCATGGGCACCAGGCATGTGTGGTGCACAGGCATACATTGCTCAGCACGCGCTaGCCCAGCCGCTGCGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: EPSSGLHGHQACVVHRHTLLSTR*PSRCAA Trigger: GGCTGCGCAGCGGCTGGGCAAGCGCGTGCTGAGCAA...TGTATGCCTGTGCACCACACATGCCTGGTGCCCATGAAGGCCAGAAGAGGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS-3UTR CAA 90 bp | ACATGGCAGCTCACAACTGTCTGTAACACCAGCTCCAATGGATCTGAGCCCTCTGACGGGGACTGCAGCTaGCTCAGCACGCGCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TWQLTTVCNTSSNGSEPSDGDCS*LSTRLP Trigger: GGGCAAGCGCGTGCTGAGCAAGCTGCAGTCCCCGTC...AGAGGGCTCAGATCCATTGGAGCTGGTGTTACAGACAGTTGTGAGCTGCCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS TCA 90 bp | GGCATCTTTCCTCTTCACTGTCCAATTCCAATAGCTCATCGATGTTaGCCTCGTCCGGCATGTCTGACTCCCTGCCGCGGTACAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GIFPLHCPIPIAHRC*PRPACLTPCRGTAP Trigger: AGGAGCTGTACCGCGGCAGGGAGTCAGACATGCCGGACGAGGTCAACATCGATGAGCTATTGGAATTGGACAGTGAAGAGGAAAGATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048187.6 ENSMUST00000207714.2 |
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| CDS CCA 90 bp | TGGAGAGAGACAAAGACCCTGATCCGAGAGAGACACAGGCTCAGATaGAAGAGGGAGATGTTTCTCAGGCTGAGAGACAGTCCCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: WRETKTLIRERHRLR*KREMFLRLRDSPQR Trigger: TCTCTGGGGACTGTCTCTCAGCCTGAGAAACATCTCCCTCTTCCATCTGAGCCTGTGTCTCTCTCGGATCAGGGTCTTTGTCTCTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS CCA 90 bp | TGGACGAAGTCCTCTGTGGGATTTGCACAAGCCTCCAGAAGTCCCTaGATTTTCCGGCATCTTTCCTCTTCACTGTCCAATTCCAATAGC | + |
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Preference number: 5 (lower is better) Translates to: WTKSSVGFAQASRSP*IFRHLSSSLSNSNS Trigger: GCTATTGGAATTGGACAGTGAAGAGGAAAGATGCCGGAAAATCCAGGGACTTCTGGAGGCTTGTGCAAATCCCACAGAGGACTTCGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS CCA 90 bp | GCATCTAGGAGCTCTGTGGGATTTGCACAAGCCTCCAGAAGTCCCTaGATTTTCCGGCATCTTTCCTCTTCACTGTCCAATTCCAATAGC | + |
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Preference number: 5 (lower is better) Translates to: ASRSSVGFAQASRSP*IFRHLSSSLSNSNS Trigger: GCTATTGGAATTGGACAGTGAAGAGGAAAGATGCCGGAAAATCCAGGGACTTCTGGAGGCTTGTGCAAATCCCACAGAGCTCCTAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS GCA 72 bp | CCCCCGGGCCGCGGGCCCGCGACGGGGACTGCAGCTTaGTCAGCACGCGCTTGCCCAGCCGCTGCGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PPGRGPATGTAA*SARACPAAAQP Trigger: TGGCTGCGCAGCGGCTGGGCAAGCGCGTGCTGAGCAAGCTGCAGTCCCCGTCGCGGGCCCGCGGCCCGGGGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048187.6 ENSMUST00000207714.2 |
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| CDS CAA 90 bp | CACTTCTCCACGTCCAGCCGTCGCTGCAGCTCCCGTCGGTCGTACTaGACCGTGACTCGCGCGTGCCGCTTCTGCAGCCCGCTGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: HFSTSSRRCSSRRSY*TVTRACRFCSPLGL Trigger: CAGCCCCAGCGGGCTGCAGAAGCGGCACGCGCGAGTCACGGTCAAGTACGACCGACGGGAGCTGCAGCGACGGCTGGACGTGGAGAAGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048187.6 ENSMUST00000207714.2 |
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| CDS CAA 72 bp | ACGTCCAGCCGTCGCTGCAGCTCCCGTCGGTCGTACTaGACCGTGACTCGCGCGTGCCGCTTCTGCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TSSRRCSSRRSY*TVTRACRFCSP Trigger: CGGGCTGCAGAAGCGGCACGCGCGAGTCACGGTCAAGTACGACCGACGGGAGCTGCAGCGACGGCTGGACGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048187.6 ENSMUST00000207714.2 |
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| CDS GCA 72 bp | TCTGAGGGGCTGGGCTGCGGGAAGCCCGGCTGTTTGTaGAGGCCCCGAAGCTTGGCCAGTAGCTCCTGGACG | + |
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Preference number: 6 (lower is better) Translates to: SEGLGCGKPGCL*RPRSLASSSWT Trigger: CGTCCAGGAGCTACTGGCCAAGCTTCGGGGCCTGCACAAACAGCCGGGCTTCCCGCAGCCCAGCCCCTCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS CAA 72 bp | TCATCTGAGGGGCTGGGCTGCGGGAAGCCCGGCTGTTaGTGCAGGCCCCGAAGCTTGGCCAGTAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSEGLGCGKPGC*CRPRSLASSSW Trigger: CCAGGAGCTACTGGCCAAGCTTCGGGGCCTGCACAAACAGCCGGGCTTCCCGCAGCCCAGCCCCTCAGATGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS TCA 72 bp | CCCCAGAGACCAGGTCTGAGCCAGCTCCAGGCCGACTaGCAGGCGGTGACGTTTGTCCCTCTGGCATCTAGG | + |
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Preference number: 6 (lower is better) Translates to: PQRPGLSQLQAD*QAVTFVPLASR Trigger: CCTAGATGCCAGAGGGACAAACGTCACCGCCTGTCAGTCGGCCTGGAGCTGGCTCAGACCTGGTCTCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207714.2 |
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| CDS CCA 72 bp | GCGGGAAGCCCGGCTGTTTGTGCAGGCCCCGAAGCTTaGCCAGTAGCTCCTGGACGAAGTCCTCTGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: AGSPAVCAGPEA*PVAPGRSPLWD Trigger: ATCCCACAGAGGACTTCGTCCAGGAGCTACTGGCCAAGCTTCGGGGCCTGCACAAACAGCCGGGCTTCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS CAA 72 bp | TGCGGGAAGCCCGGCTGTTTGTGCAGGCCCCGAAGCTaGGCCAGTAGCTCCTGGACGAAGTCCTCTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: CGKPGCLCRPRS*ASSSWTKSSVG Trigger: TCCCACAGAGGACTTCGTCCAGGAGCTACTGGCCAAGCTTCGGGGCCTGCACAAACAGCCGGGCTTCCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS CAA 72 bp | TGGCCAGTAGCTCCTGGACGAAGTCCTCTGTGGGATTaGCACAAGCCTCCAGAAGTCCCTGGATTTTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: WPVAPGRSPLWD*HKPPEVPGFSG Trigger: GCCGGAAAATCCAGGGACTTCTGGAGGCTTGTGCAAATCCCACAGAGGACTTCGTCCAGGAGCTACTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048187.6 |
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| CDS CAA 90 bp | CGGCATCTTTCCTCTTCACTGTCCAATTCCAATAGCTCATCGATGTaGACCTCGTCCGGCATGTCTGACTCCCTGCCGCGGTACAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RHLSSSLSNSNSSSM*TSSGMSDSLPRYSS Trigger: GGAGCTGTACCGCGGCAGGGAGTCAGACATGCCGGACGAGGTCAACATCGATGAGCTATTGGAATTGGACAGTGAAGAGGAAAGATGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048187.6 ENSMUST00000207714.2 |
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| CDS CAA 72 bp | TCCTCTTCACTGTCCAATTCCAATAGCTCATCGATGTaGACCTCGTCCGGCATGTCTGACTCCCTGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSLSNSNSSSM*TSSGMSDSLPR Trigger: CCGCGGCAGGGAGTCAGACATGCCGGACGAGGTCAACATCGATGAGCTATTGGAATTGGACAGTGAAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048187.6 ENSMUST00000207714.2 |
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