Pregenerated sensors for PPP1CC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004455Ensembl transcript IDs: ENSMUST00000086294.11, ENSMUST00000102528.11, ENSMUST00000128309.8, ENSMUST00000132555.8, ENSMUST00000133568.6, ENSMUST00000134719.3, ENSMUST00000151184.8
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCCCCACGGAGGGAGGCGGCCTGTGCACGCAGCCTCGATGCCCTaGCCACCTCATCCCCAGGGCGTGCCATACAGTCCAACAGAAACT | + |
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Preference number: 1 (lower is better) Translates to: RPHGGRRPVHAASMP*PPHPQGVPYSPTET Trigger: AGTTTCTGTTGGACTGTATGGCACGCCCTGGGGATGAGGTGGCCAGGGCATCGAGGCTGCGTGCACAGGCCGCCTCCCTCCGTGGGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| 3UTR CCA 90 bp | GCCATCTTCAACCACCTGTGGAGAGACCGTGTCAGTGTGAGCAGCTaGGGCACGAGCTGCCCCTCTCCTTCCCCACTGAGCTCGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: AIFNHLWRDRVSVSS*GTSCPSPSPLSSAC Trigger: GCAGGCCGAGCTCAGTGGGGAAGGAGAGGGGCAGCTCGTGCCCCAGCTGCTCACACTGACACGGTCTCTCCACAGGTGGTTGAAGATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| 3UTR CCA 90 bp | TGCTTGGCTTGCTGCTATAACCAGCAAGTGCCAGCAGTAATCAAATaGAGGAGGGCCCGACAGACAGGTCTACCTGGGCAAGCTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: CLACCYNQQVPAVIK*RRARQTGLPGQADQ Trigger: CTGGTCAGCTTGCCCAGGTAGACCTGTCTGTCGGGCCCTCCTCCATTTGATTACTGCTGGCACTTGCTGGTTATAGCAGCAAGCCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR TCA 90 bp | TTACTCAGCACTATACCACTATTGCTAGTTAAAATAACCTGCTTCTaGGGCCCCACGGAGGGAGGCGGCCTGTGCACGCAGCCTCGATGC | + |
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Preference number: 1 (lower is better) Translates to: LLSTIPLLLVKITCF*GPTEGGGLCTQPRC Trigger: GCATCGAGGCTGCGTGCACAGGCCGCCTCCCTCCGTGGGGCCTCAGAAGCAGGTTATTTTAACTAGCAATAGTGGTATAGTGCTGAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| 3UTR GCA 90 bp | AAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTGAGAATGAAGTaGTTGGCTTGCTGCTATAACCAGCAAGTGCCAGCAGTAATCAAA | + |
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Preference number: 1 (lower is better) Translates to: KGNRGSKQNALLRMK*LACCYNQQVPAVIK Trigger: TTTGATTACTGCTGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTTGGGCTTCTTTCCTCTCCTTCCCCACTaGGCTCGGCCTGCTGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: RPDPTRGGVTGLVALGFFPLLPH*ARPAAA Trigger: AGCGGCAGCAGGCCGAGCTCAGTGGGGAAGGAGAGG...AAAGAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132555.8 |
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| 3UTR-3UTR GCA 90 bp | CCACGGAGGGAGGCGGCCTGTGCACGCAGCCTCGATGCCCTGGCCACCTCATCCAAGTGCTTGGCTTGCTaGTATAACCAGCAAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PRREAACARSLDALATSSKCLAC*YNQQVP Trigger: TGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTT...GGATGAGGTGGCCAGGGCATCGAGGCTGCGTGCACAGGCCGCCTCCCTCCGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGCGGCAGGCAGGTCACTCCTGCTGCCACAGCTGCAGACACTAGTTTGTTGTGATCATACCCCGTaGTGGTGTGACAGGTCTCGT | + |
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Preference number: 2 (lower is better) Translates to: GLAAGRSLLLPQLQTLVCCDHTP*WCDRSR Trigger: ACGAGACCTGTCACACCACCACGGGGTATGATCACA...ACAAACTAGTGTCTGCAGCTGTGGCAGCAGGAGTGACCTGCCTGCCGCCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTTGGGCTTCATCTTCAACCACCTGTaGAGAGACCGTGTCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: FRPDPTRGGVTGLVALGFIFNHL*RDRVSV Trigger: CACACTGACACGGTCTCTCCACAGGTGGTTGAAGAT...GAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132555.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGCGGCAGGCAGGTCACTCCTGCTGCCACAGCTGCAGACACTAGTTTGTCCAGGCAGTGTCAAGTaGCATCTATTTCTTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GLAAGRSLLLPQLQTLVCPGSVK*HLFLCL Trigger: CAAGCAAAGAAATAGATGTCACTTGACACTGCCTGG...ACAAACTAGTGTCTGCAGCTGTGGCAGCAGGAGTGACCTGCCTGCCGCCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCTTTGTGATCATACCCCGTGGTGGTGTGACAGGTCTCGTGGCGTTGGGCATCTTCAACCACCTGTaGAGAGACCGTGTCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: ACFVIIPRGGVTGLVALGIFNHL*RDRVSV Trigger: CACACTGACACGGTCTCTCCACAGGTGGTTGAAGAT...GCCCAACGCCACGAGACCTGTCACACCACCACGGGGTATGATCACAAAGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128309.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTACACTTTCTCCTCAGACAGGATAACCTGCCAGGGTGTACAGCTTAACACCTACCCCGTGGTGGTGTaGCAGGTCTCGTGGCGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LYTFSSDRITCQGVQLNTYPVVV*QVSWRW Trigger: CCAACGCCACGAGACCTGTCACACCACCACGGGGTA...GGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGAGGAGAAAGTGTACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | GGGCCCGACAGACAGGTCTACCTGGGCAAGCTGACCAGCACATCACAGTTTAAATCTGGAAGGAACACATaGGGGTCTCATCCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: GPDRQVYLGKLTSTSQFKSGRNT*GSHPHS Trigger: TGAGTGTGGATGAGACCCTCATGTGTTCCTTCCAGA...TTTAAACTGTGATGTGCTGGTCAGCTTGCCCAGGTAGACCTGTCTGTCGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR CAA 90 bp | TTCAGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTaGGGCTTCTTTTTCTCTGCAGGCTTTAAAATCTGGAAGGAACAC | + |
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Preference number: 2 (lower is better) Translates to: FRPDPTRGGVTGLVA*GFFFSAGFKIWKEH Trigger: GTGTTCCTTCCAGATTTTAAAGCCTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGAGCTGGGGCACGAGCTaGCCCTCTCCTTCCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: FNKSETILSTWHCTRASVSWGTS*PSPSPL Trigger: CAGTGGGGAAGGAGAGGGGCAGCTCGTGCCCCAGCT...CACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATGTGCTTCAGATAGTCTaGGCAGGGCTGGCGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KPFSAHGIVHGHLCKQIHVLQIV*AGLAAG Trigger: GCCTGCCGCCAGCCCTGCCCAGACTATCTGAAGCAC...ATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| 3UTR-3UTR TCA 90 bp | CAACAGAATGCATTTATGACAATTACATGTAGAGACTCACGCACTCTAAGGCTCTACCCCGTGGTGGTGTaGCAGGTCTCGTGGCGTTGG | + |
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Preference number: 2 (lower is better) Translates to: QQNAFMTITCRDSRTLRLYPVVV*QVSWRW Trigger: CCAACGCCACGAGACCTGTCACACCACCACGGGGTA...GAGCCTTAGAGTGCGTGAGTCTCTACATGTAATTGTCATAAATGCATTCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGAAAGCATTATCGGTCACTCGTATAGGACAGTGTTGTTTCTATAATTTGGCAGCCTCGATGCCCTaGCCACCTCATCCCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PKKALSVTRIGQCCFYNLAASMP*PPHPQG Trigger: GCCCTGGGGATGAGGTGGCCAGGGCATCGAGGCTGC...CAAATTATAGAAACAACACTGTCCTATACGAGTGACCGATAATGCTTTCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCATTCCTCTCCTTCCCCACTaGGCTCGGCCTGCTGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: IYKPQCHRRIKNVAKESIPLLPH*ARPAAA Trigger: AGCGGCAGCAGGCCGAGCTCAGTGGGGAAGGAGAGG...AATGCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGAAAGCATTATCGGTCACTCGTATAGGACAGTGTTGTTTCTATAATTTGAGCTGGGGCACGAGCTaGCCCTCTCCTTCCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: PKKALSVTRIGQCCFYNLSWGTS*PSPSPL Trigger: CAGTGGGGAAGGAGAGGGGCAGCTCGTGCCCCAGCT...CAAATTATAGAAACAACACTGTCCTATACGAGTGACCGATAATGCTTTCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGGTTTGTATCAACAGAATGCATTTATGACAATTACATGTAGAGACTCAGCAGCCTCGATGCCCTaGCCACCTCATCCCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: HSGLYQQNAFMTITCRDSAASMP*PPHPQG Trigger: GCCCTGGGGATGAGGTGGCCAGGGCATCGAGGCTGC...TGAGTCTCTACATGTAATTGTCATAAATGCATTCTGTTGATACAAACCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATCTGGAAGGAACACATaGGGGTCTCATCCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: ETILSTWHCTRASVQTDSSGRNT*GSHPHS Trigger: TGAGTGTGGATGAGACCCTCATGTGTTCCTTCCAGA...TGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAATGAAGTGCTTGGCTTGCTGCTATAACCAGCAAGTGCCAGCAGTAATCTCTTTGCTTGCTTTGTaGTCATACCCCGTGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LRMKCLACCYNQQVPAVISLLAL*SYPVVV Trigger: CACCACCACGGGGTATGATCACAAAGCAAGCAAAGA...GATTACTGCTGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGTCTACCTGGGCAAGCTGACCAGCACATCACAGTTTAAAAAGGAAGGTAAGTGCTTGGCTTGCTaGTATAACCAGCAAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: RQVYLGKLTSTSQFKKEGKCLAC*YNQQVP Trigger: TGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTT...ACCTTCCTTTTTAAACTGTGATGTGCTGGTCAGCTTGCCCAGGTAGACCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTCAGACAGGATAACCTGCCAGGGTGTACAGCTTAACACCATCATCAGAGTGCAGAAAACAGAGTaGCTAACTGCCTCTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: FSSDRITCQGVQLNTIIRVQKTE*LTASLQ Trigger: TTGCAAAGAGGCAGTTAGTCACTCTGTTTTCTGCAC...TCTGATGATGGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGAGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGTCTACCTGGGCAAGCTGACCAGCACATCACAGTTTAAAAAGGAAGGTGTGCAGAAAACAGAGTaGCTAACTGCCTCTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: RQVYLGKLTSTSQFKKEGVQKTE*LTASLQ Trigger: TTGCAAAGAGGCAGTTAGTCACTCTGTTTTCTGCAC...ACCTTCCTTTTTAAACTGTGATGTGCTGGTCAGCTTGCCCAGGTAGACCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCTATAATTTGAAGCTTTCTGAATGGACGGGTTCAGGCCTGATCCAACCCTCTGGAAGGAACACATaGGGGTCTCATCCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: CFYNLKLSEWTGSGLIQPSGRNT*GSHPHS Trigger: TGAGTGTGGATGAGACCCTCATGTGTTCCTTCCAGA...GGGTTGGATCAGGCCTGAACCCGTCCATTCAGAAAGCTTCAAATTATAGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGCATCTTCAACCACCTTaGTCTGGTACATCAGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SLKPFSAHGIVHGHLCKQHLQPP*SGTSVG Trigger: ACCAACTGATGTACCAGATCAAGGTGGTTGAAGATG...CTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133568.6 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTGTGACAGGTCTCGTGGCGTTGGGCTTCTTTTTCTCTGCAGGCTTTAAAGTACACGGGCATCTGTaGAAACAGATTCATTTAACA | + |
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Preference number: 2 (lower is better) Translates to: GGVTGLVALGFFFSAGFKVHGHL*KQIHLT Trigger: TGTTAAATGAATCTGTTTGCACAGATGCCCGTGTAC...TTTAAAGCCTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGTCACACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTACACTTTCTCCTCAGACAGGATAACCTGCCAGGGTGTACAGCTTAACACCATGAAGTGCTTGGCTTaGTGCTATAACCAGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LYTFSSDRITCQGVQLNTMKCLA*CYNQQV Trigger: CACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCAT...GGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGAGGAGAAAGTGTACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR CCA 90 bp | CATCATCAGAGCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTCCAGCAGTAATCAAATaGAGGAGGGCCCGACAGACA | + |
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Preference number: 2 (lower is better) Translates to: HHQSCPQREQRFKTKCSLPAVIK*RRARQT Trigger: TGTCTGTCGGGCCCTCCTCCATTTGATTACTGCTGG...AAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGCTCTGATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTGAGAATGAAGCAGGTCTCGTGGCGTTaGGCTTCTTTTTCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AVHKGNRGSKQNALLRMKQVSWR*ASFSLQ Trigger: CTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTG...CTTCATTCTCAAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | ATCAGAGCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTGAGATCTACCTGGGCAAGCTaGCCAGCACATCACAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: IRAVHKGNRGSKQNALLRSTWAS*PAHHSL Trigger: TAAACTGTGATGTGCTGGTCAGCTTGCCCAGGTAGA...TCTCAAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGCTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | CATCATCAGAGCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTTCTGGAAGGAACACATaGGGGTCTCATCCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: HHQSCPQREQRFKTKCSLSGRNT*GSHPHS Trigger: TGAGTGTGGATGAGACCCTCATGTGTTCCTTCCAGA...AAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGCTCTGATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR CCA 90 bp | CAACAGAATGCATTTATGACAATTACATGTAGAGACTCACGCACTCTAAGGCTCCCAGCAGTAATCAAATaGAGGAGGGCCCGACAGACA | + |
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Preference number: 2 (lower is better) Translates to: QQNAFMTITCRDSRTLRLPAVIK*RRARQT Trigger: TGTCTGTCGGGCCCTCCTCCATTTGATTACTGCTGG...GAGCCTTAGAGTGCGTGAGTCTCTACATGTAATTGTCATAAATGCATTCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | CAACAGAATGCATTTATGACAATTACATGTAGAGACTCACGCACTCTAAGGCTCTCTACCTGGGCAAGCTaGCCAGCACATCACAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: QQNAFMTITCRDSRTLRLSTWAS*PAHHSL Trigger: TAAACTGTGATGTGCTGGTCAGCTTGCCCAGGTAGA...GAGCCTTAGAGTGCGTGAGTCTCTACATGTAATTGTCATAAATGCATTCTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | CATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTGTGCAGAAAACAGAGTaGCTAACTGCCTCTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: HGIVHGHLCKQIHLTGRSVQKTE*LTASLQ Trigger: TTGCAAAGAGGCAGTTAGTCACTCTGTTTTCTGCAC...ACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
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| 3UTR-3UTR TCA 90 bp | CAACAGAATGCATTTATGACAATTACATGTAGAGACTCACGCACTCTAAGGCTCTCTTTGCTTGCTTTGTaGTCATACCCCGTGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: QQNAFMTITCRDSRTLRLSLLAL*SYPVVV Trigger: CACCACCACGGGGTATGATCACAAAGCAAGCAAAGA...GAGCCTTAGAGTGCGTGAGTCTCTACATGTAATTGTCATAAATGCATTCTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCTCAGACAGGATAACCTGCCAGGGTGTACAGCTTAACACCATCATCAGAGTACACGGGCATCTGTaGAAACAGATTCATTTAACA | + |
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Preference number: 2 (lower is better) Translates to: FSSDRITCQGVQLNTIIRVHGHL*KQIHLT Trigger: TGTTAAATGAATCTGTTTGCACAGATGCCCGTGTAC...TCTGATGATGGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGAGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATCTCTTGAGAATGAAGTaGTTGGCTTGCTGCTATAAC | + |
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Preference number: 2 (lower is better) Translates to: SETILSTWHCTRASVQTDLLRMK*LACCYN Trigger: GTTATAGCAGCAAGCCAAGCACTTCATTCTCAAGAG...ATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCTTGAGAATGAAGTGCTTGGCTTGCTGCTATAACCAGCAAGTGCCAGCAATCTATTTCTTTGCTTaGTTTGTGATCATACCCCGT | + |
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Preference number: 2 (lower is better) Translates to: ALLRMKCLACCYNQQVPAIYFFA*FVIIPR Trigger: ACGGGGTATGATCACAAAGCAAGCAAAGAAATAGAT...TGCTGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAAGAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGGTTGTTTCTATAATTTaGAGCTTTCTGAATGGACGG | + |
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Preference number: 2 (lower is better) Translates to: SLKPFSAHGIVHGHLCKQVVSII*SFLNGR Trigger: CCGTCCATTCAGAAAGCTTCAAATTATAGAAACAAC...CTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
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| 3UTR-3UTR TCA 90 bp | GCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAGAAAACAGAGTaGCTAACTGCCTCTTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AFNKSETILSTWHCTRASVQKTE*LTASLQ Trigger: TTGCAAAGAGGCAGTTAGTCACTCTGTTTTCTGCAC...AGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGAGCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTGAGAATGAAGTGCTTGGCTTaGTGCTATAACCAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: IRAVHKGNRGSKQNALLRMKCLA*CYNQQV Trigger: CACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCAT...TCTCAAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGCTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGAATGCATTTATGACAATTACATGTAGAGACTCACGCACTCTAAGGCTCTCTACCATTCTCAGCACATaGCATTGTACACGGGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: QNAFMTITCRDSRTLRLSTILST*HCTRAS Trigger: AGATGCCCGTGTACAATGCCATGTGCTGAGAATGGT...AGAGAGCCTTAGAGTGCGTGAGTCTCTACATGTAATTGTCATAAATGCATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCGTACACGGGCATCTGTaGAAACAGATTCATTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: LISLKPFSAHGIVHGHLCVHGHL*KQIHLT Trigger: TGTTAAATGAATCTGTTTGCACAGATGCCCGTGTAC...GCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTCTCTTGAGAATGAAGTaGTTGGCTTGCTGCTATAAC | + |
|
Preference number: 2 (lower is better) Translates to: AFNKSETILSTWHCTRASLLRMK*LACCYN Trigger: GTTATAGCAGCAAGCCAAGCACTTCATTCTCAAGAG...AGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTACACGGGCATCTGTaGAAACAGATTCATTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: AFNKSETILSTWHCTRASVHGHL*KQIHLT Trigger: TGTTAAATGAATCTGTTTGCACAGATGCCCGTGTAC...AGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTTTAAAAACCATTCTCAGCACATaGCATTGTACACGGGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: IVHGHLCKQIHLTGRSLKTILST*HCTRAS Trigger: AGATGCCCGTGTACAATGCCATGTGCTGAGAATGGT...TTTTAAACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCATTATGAAGTGCTTGGCTTaGTGCTATAACCAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: IYKPQCHRRIKNVAKESIMKCLA*CYNQQV Trigger: CACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCAT...AATGCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAGAAAGCATTATCGGTCACTCGTATAGGACAGTGTTGTTTCTATAATTTGGTACACGGGCATCTGTaGAAACAGATTCATTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: PKKALSVTRIGQCCFYNLVHGHL*KQIHLT Trigger: TGTTAAATGAATCTGTTTGCACAGATGCCCGTGTAC...CAAATTATAGAAACAACACTGTCCTATACGAGTGACCGATAATGCTTTCTTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR GCA 72 bp | CCCACGGAGGGAGGCGGCCTGTGCACGCAGCCTCGATaGCCTGGCCACCTCATCCCCAGGGCGTGCCATACA | + |
|
Preference number: 3 (lower is better) Translates to: PTEGGGLCTQPR*PGHLIPRACHT Trigger: TGTATGGCACGCCCTGGGGATGAGGTGGCCAGGGCATCGAGGCTGCGTGCACAGGCCGCCTCCCTCCGTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| 3UTR CCA 72 bp | GGAGGGAGGCGGCCTGTGCACGCAGCCTCGATGCCCTaGCCACCTCATCCCCAGGGCGTGCCATACAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGRRPVHAASMP*PPHPQGVPYSP Trigger: TGGACTGTATGGCACGCCCTGGGGATGAGGTGGCCAGGGCATCGAGGCTGCGTGCACAGGCCGCCTCCCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| 3UTR CCA 72 bp | AACCACCTGTGGAGAGACCGTGTCAGTGTGAGCAGCTaGGGCACGAGCTGCCCCTCTCCTTCCCCACTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NHLWRDRVSVSS*GTSCPSPSPLS Trigger: GCTCAGTGGGGAAGGAGAGGGGCAGCTCGTGCCCCAGCTGCTCACACTGACACGGTCTCTCCACAGGTGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| 3UTR TCA 72 bp | CCATCTTCAACCACCTGTGGAGAGACCGTGTCAGTGTaGGCAGCTGGGGCACGAGCTGCCCCTCTCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSSTTCGETVSV*AAGARAAPLLP Trigger: GGGAAGGAGAGGGGCAGCTCGTGCCCCAGCTGCTCACACTGACACGGTCTCTCCACAGGTGGTTGAAGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| 3UTR TCA 72 bp | TGGACGGGTTCAGGCCTGATCCAACCCGTGGTGGTGTaGCAGGTCTCGTGGCGTTGGGCTTCTTTTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WTGSGLIQPVVV*QVSWRWASFSL Trigger: CAGAGAAAAAGAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCTGAACCCGTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR TCA 72 bp | ACTATACCACTATTGCTAGTTAAAATAACCTGCTTCTaGGGCCCCACGGAGGGAGGCGGCCTGTGCACGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TIPLLLVKITCF*GPTEGGGLCTQ Trigger: CTGCGTGCACAGGCCGCCTCCCTCCGTGGGGCCTCAGAAGCAGGTTATTTTAACTAGCAATAGTGGTATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| 3UTR CCA 72 bp | TGCTGCTATAACCAGCAAGTGCCAGCAGTAATCAAATaGAGGAGGGCCCGACAGACAGGTCTACCTGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CCYNQQVPAVIK*RRARQTGLPGQ Trigger: TTGCCCAGGTAGACCTGTCTGTCGGGCCCTCCTCCATTTGATTACTGCTGGCACTTGCTGGTTATAGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR CCA 72 bp | CATCTATTTCTTTGCTTGCTTTGTGATCATACCCCGTaGTGGTGTGACAGGTCTCGTGGCGTTGGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HLFLCLLCDHTP*WCDRSRGVGLL Trigger: AAGAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGGTATGATCACAAAGCAAGCAAAGAAATAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR CCA 72 bp | CTATTTCTTTGCTTGCTTTGTGATCATACCCCGTGGTaGTGTGACAGGTCTCGTGGCGTTGGGCTTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFLCLLCDHTPW*CDRSRGVGLLF Trigger: AAAAAGAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGGTATGATCACAAAGCAAGCAAAGAAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTCTTGAGAATGAAGTGCTTGGCTTGCTGCTATAACCAGCAAGTGCCAGCATTGAGAATGAAGTGCTaGGCTTGCTGCTATAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALLRMKCLACCYNQQVPALRMKC*ACCYNQ Trigger: CTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAA...TGCTGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAAGAGAGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACAGGATAACCTGCCAGGGTGTACAGCTTAACACCATCATCAGAGCTGTCTTGAGAATGAAGTGCTaGGCTTGCTGCTATAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: SDRITCQGVQLNTIIRAVLRMKC*ACCYNQ Trigger: CTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAA...GACAGCTCTGATGATGGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCATTATCGGTCAACAGGTCTCGTGGCGTaGGGCTTCTTTTTCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ASMSPQNKECSQRKHYRSTGLVA*GFFFSA Trigger: TGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGT...TGACCGATAATGCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR GCA 72 bp | GATCAATTGTACACTTTCTCCTCAGACAGGATAACCTaGCAGGGTGTACAGCTTAACACCATCATCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DQLYTFSSDRIT*QGVQLNTIIRA Trigger: AGCTCTGATGATGGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGAGGAGAAAGTGTACAATTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCTCAGACAGGATAACCTGCCAGGGTGTACAGCTTAACACCATCATCAGAAAACAAAATGCTCTCTaGAGAATGAAGTGCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FSSDRITCQGVQLNTIIRKQNAL*RMKCLA Trigger: AGCCAAGCACTTCATTCTCAAGAGAGCATTTTGTTT...TCTGATGATGGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGAGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR GCA 72 bp | AGAGGTTCAAAACAAAATGCTCTCTTGAGAATGAAGTaGTTGGCTTGCTGCTATAACCAGCAAGTGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RGSKQNALLRMK*LACCYNQQVPA Trigger: TGCTGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAAGAGAGCATTTTGTTTTGAACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR TCA 72 bp | ACGCTATGTTACAAGTCCCAACCAGGCAGTGTCAAGTaGCATCTATTTCTTTGCTTGCTTTGTGATCATACC | + |
|
Preference number: 3 (lower is better) Translates to: TLCYKSQPGSVK*HLFLCLLCDHT Trigger: GGTATGATCACAAAGCAAGCAAAGAAATAGATGTCACTTGACACTGCCTGGTTGGGACTTGTAACATAGCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCAAGCTGACCAGCACATCACAGTTTAAAAAGGAAGGTTATGAACGCTATAAACAAAATGCTCTCTaGAGAATGAAGTGCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGKLTSTSQFKKEGYERYKQNAL*RMKCLA Trigger: AGCCAAGCACTTCATTCTCAAGAGAGCATTTTGTTT...ATAGCGTTCATAACCTTCCTTTTTAAACTGTGATGTGCTGGTCAGCTTGCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| 3UTR GCA 72 bp | CCATTCTCAGCACATGGCATTGTACACGGGCATCTGTaGAAACAGATTCATTTAACAGGTCGTAGTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PFSAHGIVHGHL*KQIHLTGRSLK Trigger: TTTTAAACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR CCA 72 bp | CTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATaGCATTGTACACGGGCATCTGTGCAAACAGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LAFNKSETILST*HCTRASVQTDS Trigger: TGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAACCATCTTCAACCACCTaGATCTGGTACATCAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLIYKPQCHRRIKNVAKEPSSTT*IWYISW Trigger: CCAACTGATGTACCAGATCAAGGTGGTTGAAGATGG...TTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133568.6 |
||
| CDS-3UTR TCA 90 bp | CCACGGAGGGAGGCGGCCTGTGCACGCAGCCTCGATGCCCTGGCCACCTCATCCTACCCCGTGGTGGTGTaGCAGGTCTCGTGGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRREAACARSLDALATSSYPVVV*QVSWRW Trigger: CCAACGCCACGAGACCTGTCACACCACCACGGGGTA...GGATGAGGTGGCCAGGGCATCGAGGCTGCGTGCACAGGCCGCCTCCCTCCGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102528.11 |
||
| CDS-3UTR TCA 90 bp | CCACGGAGGGAGGCGGCCTGTGCACGCAGCCTCGATGCCCTGGCCACCTCATCCGGTGATAAACCTCCATaGCAGCAGAATATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRREAACARSLDALATSSGDKPP*QQNIFS Trigger: CGAGAAGATATTCTGCTGTCATGGAGGTTTATCACC...GGATGAGGTGGCCAGGGCATCGAGGCTGCGTGCACAGGCCGCCTCCCTCCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTCAGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTTGGGCATGCTGGCGCACTCGTaGTTCCCTCTGAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFRPDPTRGGVTGLVALGMLAHS*FPLRRK Trigger: CTTTCTTCTCAGAGGGAACCACGAGTGCGCCAGCAT...GCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCTGAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR GCA 90 bp | GGGTTCAGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTTGGGCCTCGTCCACGATGGCTaGTATCGGCAAGCAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFRPDPTRGGVTGLVALGLVHDG*YRQAVK Trigger: TTTAACTGCTTGCCGATAGCAGCCATCGTGGACGAG...GCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCTGAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTCAGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTTGGGCACTTCCAGCAGCCGTTaGATGATGCTGTCGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFRPDPTRGGVTGLVALGTSSSR*MMLSML Trigger: CAACATCGACAGCATCATCCAACGGCTGCTGGAAGT...GCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCTGAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGTGTGCTTCAGATAGTCTGGGCAGGGCTGGCGGCAGGCAGGTCACTCCTGATGCTGGCGCACTCGTaGTTCCCTCTGAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSVLQIVWAGLAAGRSLLMLAHS*FPLRRK Trigger: CTTTCTTCTCAGAGGGAACCACGAGTGCGCCAGCAT...CAGGAGTGACCTGCCTGCCGCCAGCCCTGCCCAGACTATCTGAAGCACACTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGCTTCAGATAGTCTGGGCAGGGCTGGCGGCAGGCAGGTCACTCCTGCTATGCTGGCGCACTCGTaGTTCCCTCTGAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECASDSLGRAGGRQVTPAMLAHS*FPLRRK Trigger: CTTTCTTCTCAGAGGGAACCACGAGTGCGCCAGCAT...AGCAGGAGTGACCTGCCTGCCGCCAGCCCTGCCCAGACTATCTGAAGCACACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGCGGCAGGCAGGTCACTCCTGCTGCCACAGCTGCAGACACTAGTTTGTTCTTTGCTTGCTTTGTaGTCATACCCCGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLAAGRSLLLPQLQTLVCSLLAL*SYPVVV Trigger: CACCACCACGGGGTATGATCACAAAGCAAGCAAAGA...ACAAACTAGTGTCTGCAGCTGTGGCAGCAGGAGTGACCTGCCTGCCGCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102528.11 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGCTTCAGATAGTCTGGGCAGGGCTGGCGGCAGGCAGGTCACTCCTGCTCTCGTCCACGATGGCTaGTATCGGCAAGCAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ECASDSLGRAGGRQVTPALVHDG*YRQAVK Trigger: TTTAACTGCTTGCCGATAGCAGCCATCGTGGACGAG...AGCAGGAGTGACCTGCCTGCCGCCAGCCCTGCCCAGACTATCTGAAGCACACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGAAGGAGTGTGCTTCAGATAGTCTGGGCAGGGCTGGCGGCAGGCAGGTCATCTAAAAGGATAGGCTaGCTGAGGAAGATCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VGRSVLQIVWAGLAAGRSSKRIG*LRKISR Trigger: TCGGGAGATCTTCCTCAGTCAGCCTATCCTTTTAGA...TGACCTGCCTGCCGCCAGCCCTGCCCAGACTATCTGAAGCACACTCCTTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGCGGCAGGCAGGTCACTCCTGCTGCCACAGCTGCAGACACTAGTTTGTCAAATAGTTGCTCTCTaGAGGAAAGCCACCGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLAAGRSLLLPQLQTLVCQIVAL*RKATVF Trigger: GAATACGGTGGCTTTCCTCCAGAGAGCAACTATTTG...ACAAACTAGTGTCTGCAGCTGTGGCAGCAGGAGTGACCTGCCTGCCGCCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR TCA 90 bp | ATGGACGGGTTCAGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTCACAAAGAAGACCTTaGTCTGGTACATCAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MDGFRPDPTRGGVTGLVASQRRP*SGTSVG Trigger: ACCAACTGATGTACCAGATCAAGGTCTTCTTTGTGA...CGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCTGAACCCGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGCTTTGTGATCATACCCCGTGGTGGTGTGACAGGTCTCGTGGCGTTGGGCCTTCTGCACCAAATGTaGAGGACACTCCTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACFVIIPRGGVTGLVALGLLHQM*RTLLCH Trigger: ATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAG...GCCCAACGCCACGAGACCTGTCACACCACCACGGGGTATGATCACAAAGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128309.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTTGGGCTTCTTTAGTTCTCCGGATACTTaGTTTTGTAGGCCAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPDPTRGGVTGLVALGFFSSPDT*FCRPAR Trigger: TCTTGCTGGCCTACAAAATCAAGTATCCGGAGAACT...AAAGAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR TCA 90 bp | CTTCAACCACCTGTGGAGAGACCGTGTCAGTGTGAGCAGCTGGGGCACGAGCTGGTCAAAGTCAGTACCTaGTGGGCTCTACATATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQPPVERPCQCEQLGHELVKVST*WALHIR Trigger: TCTTATATGTAGAGCCCATCAGGTACTGACTTTGAC...CAGCTCGTGCCCCAGCTGCTCACACTGACACGGTCTCTCCACAGGTGGTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTGCTTGCTTTGTGATCATACCCCGTGGTGGTGTGACAGGTCTCGTGGCGGAGCTGGACATTCTTaGCTGGCTTGGACCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLCLLCDHTPWWCDRSRGGAGHS*LAWTLS Trigger: TGAGAGGGTCCAAGCCAGGCAAGAATGTCCAGCTCC...GCCACGAGACCTGTCACACCACCACGGGGTATGATCACAAAGCAAGCAAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCCGACAGACAGGTCTACCTGGGCAAGCTGACCAGCACATCACAGTTTAAAACTTCCAGCAGCCGTTaGATGATGCTGTCGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPDRQVYLGKLTSTSQFKTSSSR*MMLSML Trigger: CAACATCGACAGCATCATCCAACGGCTGCTGGAAGT...TTTAAACTGTGATGTGCTGGTCAGCTTGCCCAGGTAGACCTGTCTGTCGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| 3UTR CAA 72 bp | GATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTaGGGCTTCTTTTTCTCTGCAGGCTTTAAAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPTRGGVTGLVA*GFFFSAGFKIW Trigger: CCAGATTTTAAAGCCTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGTTGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000132555.8 ENSMUST00000133568.6 ENSMUST00000151184.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCACCTCATCCCCAGGGCGTGCCATACAGTCCAACAGAAACTTTGGCTTTAACTTCCAGCAGCCGTTaGATGATGCTGTCGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WPPHPQGVPYSPTETLALTSSSR*MMLSML Trigger: CAACATCGACAGCATCATCCAACGGCTGCTGGAAGT...TAAAGCCAAAGTTTCTGTTGGACTGTATGGCACGCCCTGGGGATGAGGTGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCACCTCATCCCCAGGGCGTGCCATACAGTCCAACAGAAACTTTGGCTTTATCTAAAAGGATAGGCTaGCTGAGGAAGATCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: WPPHPQGVPYSPTETLALSKRIG*LRKISR Trigger: TCGGGAGATCTTCCTCAGTCAGCCTATCCTTTTAGA...TAAAGCCAAAGTTTCTGTTGGACTGTATGGCACGCCCTGGGGATGAGGTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGGGAGCTGGACATTCTTaGCTGGCTTGGACCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKPFSAHGIVHGHLCKQGAGHS*LAWTLS Trigger: TGAGAGGGTCCAAGCCAGGCAAGAATGTCCAGCTCC...CTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | ATAACCTGCCAGGGTGTACAGCTTAACACCATCATCAGAGCTGTCCACAAAGGGTGTGATCATACCCCGTaGTGGTGTGACAGGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ITCQGVQLNTIIRAVHKGCDHTP*WCDRSR Trigger: ACGAGACCTGTCACACCACCACGGGGTATGATCACA...CCCTTTGTGGACAGCTCTGATGATGGTGTTAAGCTGTACACCCTGGCAGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102528.11 |
||
| CDS-3UTR CCA 90 bp | TGGCCACCTCATCCCCAGGGCGTGCCATACAGTCCAACAGAAACTTTGGCTTTACAAATAGTTGCTCTCTaGAGGAAAGCCACCGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: WPPHPQGVPYSPTETLALQIVAL*RKATVF Trigger: GAATACGGTGGCTTTCCTCCAGAGAGCAACTATTTG...TAAAGCCAAAGTTTCTGTTGGACTGTATGGCACGCCCTGGGGATGAGGTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCACCTCATCCCCAGGGCGTGCCATACAGTCCAACAGAAACTTTGGCTTTAGTCAAAGTCAGTACCTaGTGGGCTCTACATATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WPPHPQGVPYSPTETLALVKVST*WALHIR Trigger: TCTTATATGTAGAGCCCATCAGGTACTGACTTTGAC...TAAAGCCAAAGTTTCTGTTGGACTGTATGGCACGCCCTGGGGATGAGGTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128309.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCGGAGCTGGACATTCTTaGCTGGCTTGGACCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LISLKPFSAHGIVHGHLCGAGHS*LAWTLS Trigger: TGAGAGGGTCCAAGCCAGGCAAGAATGTCCAGCTCC...GCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATCTGGACATTCTTGCCTaGCTTGGACCCTCTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SETILSTWHCTRASVQTDLDILA*LGPSHF Trigger: GAAGTGAGAGGGTCCAAGCCAGGCAAGAATGTCCAG...ATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGATGCTGGCGCACTCGTaGTTCCCTCTGAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSTWHCTRASVQTDSFNRMLAHS*FPLRRK Trigger: CTTTCTTCTCAGAGGGAACCACGAGTGCGCCAGCAT...CCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR CCA 90 bp | GAAGGTTATGAACGCTATGTTACAAGTCCCAACCAGGCAGTGTCAAGTGACATCTCTTCTCGTCCACGATaGCTGCTATCGGCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGYERYVTSPNQAVSSDISSRPR*LLSASS Trigger: ACTGCTTGCCGATAGCAGCCATCGTGGACGAGAAGA...GATGTCACTTGACACTGCCTGGTTGGGACTTGTAACATAGCGTTCATAACCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTGAGAATGATCATACCCCGTGGTaGTGTGACAGGTCTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSCPQREQRFKTKCSLENDHTPW*CDRSRG Trigger: GCCACGAGACCTGTCACACCACCACGGGGTATGATC...ATTCTCAAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102528.11 |
||
| CDS-3UTR TCA 90 bp | ATAACCTGCCAGGGTGTACAGCTTAACACCATCATCAGAGCTGTCCACAAAGGGAGTTCTCCGGATACTTaGTTTTGTAGGCCAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITCQGVQLNTIIRAVHKGSSPDT*FCRPAR Trigger: TCTTGCTGGCCTACAAAATCAAGTATCCGGAGAACT...CCCTTTGTGGACAGCTCTGATGATGGTGTTAAGCTGTACACCCTGGCAGGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | AAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTCTTCTCGTCCACGATaGCTGCTATCGGCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KPFSAHGIVHGHLCKQIHSSRPR*LLSASS Trigger: ACTGCTTGCCGATAGCAGCCATCGTGGACGAGAAGA...ATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGTGACAGGTCTCGTGGCGTTGGGCTTCTTTTTCTCTGCAGGCTTTAAATCAACCACCTTGATCTaGTACATCAGTTGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGVTGLVALGFFFSAGFKSTTLI*YISWSH Trigger: ATGAGACCAACTGATGTACCAGATCAAGGTGGTTGA...TTTAAAGCCTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGTCACACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134719.3 ENSMUST00000151184.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGTTTAAAAAGGAAGGTTATGAACGCTATGTTACAAGTCCCAACCAGGCAGGAGCTGGACATTCTTaGCTGGCTTGGACCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQFKKEGYERYVTSPNQAGAGHS*LAWTLS Trigger: TGAGAGGGTCCAAGCCAGGCAAGAATGTCCAGCTCC...TGCCTGGTTGGGACTTGTAACATAGCGTTCATAACCTTCCTTTTTAAACTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCTCGTCCACGATGGCTaGTATCGGCAAGCAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAHGIVHGHLCKQIHLTGLVHDG*YRQAVK Trigger: TTTAACTGCTTGCCGATAGCAGCCATCGTGGACGAG...ACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAAGCTGACCAGCACATCACAGTTTAAAAAGGAAGGTTATGAACGCTATCTCGTCCACGATGGCTaGTATCGGCAAGCAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGKLTSTSQFKKEGYERYLVHDG*YRQAVK Trigger: TTTAACTGCTTGCCGATAGCAGCCATCGTGGACGAG...ATAGCGTTCATAACCTTCCTTTTTAAACTGTGATGTGCTGGTCAGCTTGCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTGAGATCTTCTCGTCCACGATaGCTGCTATCGGCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRAVHKGNRGSKQNALLRSSRPR*LLSASS Trigger: ACTGCTTGCCGATAGCAGCCATCGTGGACGAGAAGA...TCTCAAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGCTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | CATCATCAGAGCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTCAGGTCTCGTGGCGTTaGGCTTCTTTTTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HHQSCPQREQRFKTKCSLQVSWR*ASFSLQ Trigger: CTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTG...AAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGCTCTGATGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102528.11 |
||
| CDS-3UTR TCA 90 bp | TCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATAGTTCTCCGGATACTTaGTTTTGTAGGCCAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SETILSTWHCTRASVQTDSSPDT*FCRPAR Trigger: TCTTGCTGGCCTACAAAATCAAGTATCCGGAGAACT...ATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR TCA 90 bp | AAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATCTTCTGCACCAAATGTaGAGGACACTCCTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPFSAHGIVHGHLCKQIHLLHQM*RTLLCH Trigger: ATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAG...ATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | GAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCACCATCTTCAACCACCTaGTGGGCTCTACATATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETILSTWHCTRASVQTDSPSSTT*WALHIR Trigger: TCTTATATGTAGAGCCCATCAGGTGGTTGAAGATGG...TGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGTCACTCCTGCTGCCACAGCTGCAGACACTAGTTTGTACATGACAAGACTTATGGAGAAATTTTaGAACCACTTCTGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQVTPAATAADTSLYMTRLMEKF*NHFCTK Trigger: TTTGGTGCAGAAGTGGTTGCAAAATTTCTCCATAAG...TCTTGTCATGTACAAACTAGTGTCTGCAGCTGTGGCAGCAGGAGTGACCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | GAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCACAAATAGTTGCTCTCTaGAGGAAAGCCACCGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: ETILSTWHCTRASVQTDSQIVAL*RKATVF Trigger: GAATACGGTGGCTTTCCTCCAGAGAGCAACTATTTG...TGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR TCA 90 bp | ACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTGGTGATAAACCTCCATaGCAGCAGAATATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TILSTWHCTRASVQTDSFGDKPP*QQNIFS Trigger: CGAGAAGATATTCTGCTGTCATGGAGGTTTATCACC...AAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | AAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATGTGCAGAAAACAGAGTaGCTAACTGCCTCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPFSAHGIVHGHLCKQIHVQKTE*LTASLQ Trigger: TTGCAAAGAGGCAGTTAGTCACTCTGTTTTCTGCAC...ATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 |
||
| CDS-3UTR GCA 90 bp | AAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATCGAGAAACAAATAGTTaGTCTCTGGAGGAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPFSAHGIVHGHLCKQIHRETNS*SLEESH Trigger: GTGGCTTTCCTCCAGAGAGCAACTATTTGTTTCTCG...ATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR GCA 90 bp | GAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTTGCAACCACTTCTaGACCAAATGTGAAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ETILSTWHCTRASVQTDSFCNHF*TKCEGH Trigger: GTGTCCTTCACATTTGGTGCAGAAGTGGTTGCAAAA...TGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR GCA 90 bp | CATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTCTCGGCTCACACCCATaGTCTAAGTGTACATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGIVHGHLCKQIHLTGRSLGSHP*SKCTCK Trigger: TTTACATGTACACTTAGAGCATGGGTGTGAGCCGAG...ACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR GCA 90 bp | ACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTCTCGGCTCACACCCATaGTCTAAGTGTACATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TILSTWHCTRASVQTDSFLGSHP*SKCTCK Trigger: TTTACATGTACACTTAGAGCATGGGTGTGAGCCGAG...AAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | ACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTCAAATAGTTGCTCTCTaGAGGAAAGCCACCGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: TILSTWHCTRASVQTDSFQIVAL*RKATVF Trigger: GAATACGGTGGCTTTCCTCCAGAGAGCAACTATTTG...AAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGAAGAAGACCTTGATCTaGTACATCAGTTGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLKPFSAHGIVHGHLCKQKKTLI*YISWSH Trigger: ATGAGACCAACTGATGTACCAGATCAAGGTCTTCTT...CTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| 3UTR CAA 72 bp | GGTTCAAAACAAAATGCTCTCTTGAGAATGAAGTGCTaGGCTTGCTGCTATAACCAGCAAGTGCCAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSKQNALLRMKC*ACCYNQQVPAV Trigger: TACTGCTGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAAGAGAGCATTTTGTTTTGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000134719.3 |
||
| CDS-3UTR TCA 90 bp | CTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCAAGTTCTCCGGATACTTaGTTTTGTAGGCCAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAFNKSETILSTWHCTRASSPDT*FCRPAR Trigger: TCTTGCTGGCCTACAAAATCAAGTATCCGGAGAACT...TGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR TCA 90 bp | GCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGGTGATAAACCTCCATaGCAGCAGAATATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AFNKSETILSTWHCTRASGDKPP*QQNIFS Trigger: CGAGAAGATATTCTGCTGTCATGGAGGTTTATCACC...AGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGCTTCTGCACCAAATGTaGAGGACACTCCTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLAFNKSETILSTWHCTRLLHQM*RTLLCH Trigger: ATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAG...CCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCACCATCTTCAACCACCTaGTGGGCTCTACATATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAFNKSETILSTWHCTRAPSSTT*WALHIR Trigger: TCTTATATGTAGAGCCCATCAGGTGGTTGAAGATGG...TGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 |
||
| CDS-3UTR TCA 90 bp | CTGACCAGCACATCACAGTTTAAAAAGGAAGGTTATGAACGCTATGTTACAAGTTCTGGAAGGAACACATaGGGGTCTCATCCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSTSQFKKEGYERYVTSSGRNT*GSHPHS Trigger: TGAGTGTGGATGAGACCCTCATGTGTTCCTTCCAGA...ACTTGTAACATAGCGTTCATAACCTTCCTTTTTAAACTGTGATGTGCTGGTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102528.11 |
||
| CDS-3UTR CCA 90 bp | ATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTTTAAAAATGCTGGCGCACTCGTaGTTCCCTCTGAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVHGHLCKQIHLTGRSLKMLAHS*FPLRRK Trigger: CTTTCTTCTCAGAGGGAACCACGAGTGCGCCAGCAT...TTTTAAACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR CCA 90 bp | ATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTTTAAAATCTTCTCGTCCACGATaGCTGCTATCGGCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVHGHLCKQIHLTGRSLKSSRPR*LLSASS Trigger: ACTGCTTGCCGATAGCAGCCATCGTGGACGAGAAGA...TTTTAAACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATAATTTGAAGCTTTCTGAATGGACGGGTTCAGGCCTGATCCAACCCGTGAAGAAGACCTTGATCTaGTACATCAGTTGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYNLKLSEWTGSGLIQPVKKTLI*YISWSH Trigger: ATGAGACCAACTGATGTACCAGATCAAGGTCTTCTT...CACGGGTTGGATCAGGCCTGAACCCGTCCATTCAGAAAGCTTCAAATTATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGGTGATAAACCTCCATaGCAGCAGAATATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLAFNKSETILSTWHCTRGDKPP*QQNIFS Trigger: CGAGAAGATATTCTGCTGTCATGGAGGTTTATCACC...CCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTTCTATAATTTGAAGCTTTCTGAATGGACGGGTTCAGGCCTGATCCAAGTGCAGAAAACAGAGTaGCTAACTGCCTCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCFYNLKLSEWTGSGLIQVQKTE*LTASLQ Trigger: TTGCAAAGAGGCAGTTAGTCACTCTGTTTTCTGCAC...TTGGATCAGGCCTGAACCCGTCCATTCAGAAAGCTTCAAATTATAGAAACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102528.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTTTAAAATCTGGAAGGAACACATaGGGGTCTCATCCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVHGHLCKQIHLTGRSLKSGRNT*GSHPHS Trigger: TGAGTGTGGATGAGACCCTCATGTGTTCCTTCCAGA...TTTTAAACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 |
||
| CDS-3UTR GCA 90 bp | CACAGTTTAAAAAGGAAGGTTATGAACGCTATGTTACAAGTCCCAACCAGGCAGTTTTGCAACCACTTCTaGACCAAATGTGAAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLKRKVMNAMLQVPTRQFCNHF*TKCEGH Trigger: GTGTCCTTCACATTTGGTGCAGAAGTGGTTGCAAAA...CTGCCTGGTTGGGACTTGTAACATAGCGTTCATAACCTTCCTTTTTAAACTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR GCA 90 bp | GCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTCTTATGGAGAAATTTTaGAACCACTTCTGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AHGIVHGHLCKQIHLTGRLMEKF*NHFCTK Trigger: TTTGGTGCAGAAGTGGTTGCAAAATTTCTCCATAAG...ACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTTTAAAAACTTCCAGCAGCCGTTaGATGATGCTGTCGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IVHGHLCKQIHLTGRSLKTSSSR*MMLSML Trigger: CAACATCGACAGCATCATCCAACGGCTGCTGGAAGT...TTTTAAACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGCAAATAGTTGCTCTCTaGAGGAAAGCCACCGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: KLAFNKSETILSTWHCTRQIVAL*RKATVF Trigger: GAATACGGTGGCTTTCCTCCAGAGAGCAACTATTTG...CCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR CCA 90 bp | AGACAGGTCTACCTGGGCAAGCTGACCAGCACATCACAGTTTAAAAAGGAAGGTTCCAAATCATGCTTATaGAGAAATTTTGCAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: RQVYLGKLTSTSQFKKEGSKSCL*RNFATT Trigger: AGTGGTTGCAAAATTTCTCCATAAGCATGATTTGGA...ACCTTCCTTTTTAAACTGTGATGTGCTGGTCAGCTTGCCCAGGTAGACCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAACAGGTCTCGTGGCGTTaGGCTTCTTTTTCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLIYKPQCHRRIKNVAKQVSWR*ASFSLQ Trigger: CTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTG...TTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAAAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 |
||
| CDS-3UTR TCA 90 bp | TTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCTCTAAAAGGATAGGCTaGCTGAGGAAGATCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LIYKPQCHRRIKNVAKESSKRIG*LRKISR Trigger: TCGGGAGATCTTCCTCAGTCAGCCTATCCTTTTAGA...GCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGTGTCACCACATATCTTaGGTGGTGCTTCAAGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLAFNKSETILSTWHCTRCHHIS*VVLQVL Trigger: TAGAACTTGAAGCACCACTCAAGATATGTGGTGACA...CCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | TTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCCTTCTGCACCAAATGTaGAGGACACTCCTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIYKPQCHRRIKNVAKESLLHQM*RTLLCH Trigger: ATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAG...GCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | TTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCGTTGTTTCTATAATTTaGAGCTTTCTGAATGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LISLKPFSAHGIVHGHLCVVSII*SFLNGR Trigger: CCGTCCATTCAGAAAGCTTCAAATTATAGAAACAAC...GCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086294.11 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGTTTTGCAACCACTTCTaGACCAAATGTGAAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: KLAFNKSETILSTWHCTRFCNHF*TKCEGH Trigger: GTGTCCTTCACATTTGGTGCAGAAGTGGTTGCAAAA...CCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | CCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCATTATCGGTCACAAGAAGACCTTGATCTaGTACATCAGTTGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQCHRRIKNVAKESIIGHKKTLI*YISWSH Trigger: ATGAGACCAACTGATGTACCAGATCAAGGTCTTCTT...GTGACCGATAATGCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCCAAATCATGCTTATaGAGAAATTTTGCAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSTWHCTRASVQTDSFNRSKSCL*RNFATT Trigger: AGTGGTTGCAAAATTTCTCCATAAGCATGATTTGGA...CCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | ATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCATTTCTAAAAGGATAGGCTaGCTGAGGAAGATCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IYKPQCHRRIKNVAKESISKRIG*LRKISR Trigger: TCGGGAGATCTTCCTCAGTCAGCCTATCCTTTTAGA...AATGCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | AGCACATCACAGTTTAAAAAGGAAGGTTATGAACGCTATGTTACAAGTCCCAACTCACAAAGAAGACCTTaGTCTGGTACATCAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STSQFKKEGYERYVTSPNSQRRP*SGTSVG Trigger: ACCAACTGATGTACCAGATCAAGGTCTTCTTTGTGA...GTTGGGACTTGTAACATAGCGTTCATAACCTTCCTTTTTAAACTGTGATGTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAAGTTCTCCGGATACTTaGTTTTGTAGGCCAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLIYKPQCHRRIKNVAKSSPDT*FCRPAR Trigger: TCTTGCTGGCCTACAAAATCAAGTATCCGGAGAACT...TTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAAAAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 ENSMUST00000133568.6 |
||
| CDS-3UTR GCA 90 bp | ATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTTTAAAATTTTGCAACCACTTCTaGACCAAATGTGAAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: IVHGHLCKQIHLTGRSLKFCNHF*TKCEGH Trigger: GTGTCCTTCACATTTGGTGCAGAAGTGGTTGCAAAA...TTTTAAACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGTTTAAAAAGGAAGGTTATGAACGCTATGTTACAAGTCCCAACCAGGCACTTATGGAGAAATTTTaGAACCACTTCTGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQFKKEGYERYVTSPNQALMEKF*NHFCTK Trigger: TTTGGTGCAGAAGTGGTTGCAAAATTTCTCCATAAG...TGCCTGGTTGGGACTTGTAACATAGCGTTCATAACCTTCCTTTTTAAACTGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | AGCACATCACAGTTTAAAAAGGAAGGTTATGAACGCTATGTTACAAGTCCCAACAAGAAGACCTTGATCTaGTACATCAGTTGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STSQFKKEGYERYVTSPNKKTLI*YISWSH Trigger: ATGAGACCAACTGATGTACCAGATCAAGGTCTTCTT...GTTGGGACTTGTAACATAGCGTTCATAACCTTCCTTTTTAAACTGTGATGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCTCAACCACCTTGATCTaGTACATCAGTTGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIYKPQCHRRIKNVAKESSTTLI*YISWSH Trigger: ATGAGACCAACTGATGTACCAGATCAAGGTGGTTGA...GCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151184.8 |
||
| CDS-3UTR TCA 90 bp | ATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCATTTCACAAAGAAGACCTTaGTCTGGTACATCAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYKPQCHRRIKNVAKESISQRRP*SGTSVG Trigger: ACCAACTGATGTACCAGATCAAGGTCTTCTTTGTGA...AATGCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR TCA 90 bp | CACAGTGGTTTGTATCAACAGAATGCATTTATGACAATTACATGTAGAGACTCATCACAAAGAAGACCTTaGTCTGGTACATCAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSGLYQQNAFMTITCRDSSQRRP*SGTSVG Trigger: ACCAACTGATGTACCAGATCAAGGTCTTCTTTGTGA...TGAGTCTCTACATGTAATTGTCATAAATGCATTCTGTTGATACAAACCACTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAACTTATGGAGAAATTTTaGAACCACTTCTGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLIYKPQCHRRIKNVAKLMEKF*NHFCTK Trigger: TTTGGTGCAGAAGTGGTTGCAAAATTTCTCCATAAG...TTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAAAAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCTCCAAATCATGCTTATaGAGAAATTTTGCAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: LIYKPQCHRRIKNVAKESSKSCL*RNFATT Trigger: AGTGGTTGCAAAATTTCTCCATAAGCATGATTTGGA...GCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTGATTTATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAATCCAAATCATGCTTATaGAGAAATTTTGCAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLLIYKPQCHRRIKNVAKSKSCL*RNFATT Trigger: AGTGGTTGCAAAATTTCTCCATAAGCATGATTTGGA...TTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATAAATCAAAAGGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CAA 90 bp | ATGGACGGGTTCAGGCCTGATCCAACCCGTGGTGGTGTGACAGGTCTCGTGGCGTGGAGCTGGACATTCTaGCCTGGCTTGGACCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MDGFRPDPTRGGVTGLVAWSWTF*PGLDPL Trigger: GAGAGGGTCCAAGCCAGGCAAGAATGTCCAGCTCCA...CGCCACGAGACCTGTCACACCACCACGGGTTGGATCAGGCCTGAACCCGTCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132555.8 |
||
| CDS-3UTR CAA 90 bp | CATAGCCATCTTCAACCACCTGTGGAGAGACCGTGTCAGTGTGAGCAGCTGGGGATGATGCTGTCGATGTaGAGTTTGTCGATATCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSHLQPPVERPCQCEQLGMMLSM*SLSISA Trigger: GGCGGATATCGACAAACTCAACATCGACAGCATCAT...CCCCAGCTGCTCACACTGACACGGTCTCTCCACAGGTGGTTGAAGATGGCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTTGAGAATGAAGTGCTTGGCTTGCTGCTATAACCAGCAAGTGCCAGCATGGAGCTGGACATTCTaGCCTGGCTTGGACCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALLRMKCLACCYNQQVPAWSWTF*PGLDPL Trigger: GAGAGGGTCCAAGCCAGGCAAGAATGTCCAGCTCCA...TGCTGGCACTTGCTGGTTATAGCAGCAAGCCAAGCACTTCATTCTCAAGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGTGGAGCTGGACATTCTaGCCTGGCTTGGACCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLKPFSAHGIVHGHLCKQWSWTF*PGLDPL Trigger: GAGAGGGTCCAAGCCAGGCAAGAATGTCCAGCTCCA...CTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CAA 90 bp | TTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCTGGAGCTGGACATTCTaGCCTGGCTTGGACCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LISLKPFSAHGIVHGHLCWSWTF*PGLDPL Trigger: GAGAGGGTCCAAGCCAGGCAAGAATGTCCAGCTCCA...GCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGTGACAGGTCTCGTGGCGTTGGGCTTCTTTTTCTCTGCAGGCTTTAAAATCACAAAGAAGACCTaGATCTGGTACATCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGVTGLVALGFFFSAGFKITKKT*IWYISW Trigger: CCAACTGATGTACCAGATCAAGGTCTTCTTTGTGAT...TTTAAAGCCTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGTCACACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACAGGATAACCTGCCAGGGTGTACAGCTTAACACCATCATCAGAGCTGTCATGTCACCACATATCTaGAGTGGTGCTTCAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDRITCQGVQLNTIIRAVMSPHI*SGASSS Trigger: AGAACTTGAAGCACCACTCAAGATATGTGGTGACAT...GACAGCTCTGATGATGGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACACAGGTCTCGTGGCGTaGGGCTTCTTTTTCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILSTWHCTRASVQTDSFNTGLVA*GFFFSA Trigger: TGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGT...GTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 |
||
| CDS-3UTR CAA 90 bp | CCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCATTATCGGTCACACAGGTCTCGTGGCGTaGGGCTTCTTTTTCTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: PQCHRRIKNVAKESIIGHTGLVA*GFFFSA Trigger: TGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGT...GTGACCGATAATGCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102528.11 |
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| CDS-3UTR CAA 90 bp | TTGTACACTTTCTCCTCAGACAGGATAACCTGCCAGGGTGTACAGCTTAACACCATCACAAAGAAGACCTaGATCTGGTACATCAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LYTFSSDRITCQGVQLNTITKKT*IWYISW Trigger: CCAACTGATGTACCAGATCAAGGTCTTCTTTGTGAT...GGTGTTAAGCTGTACACCCTGGCAGGTTATCCTGTCTGAGGAGAAAGTGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| CDS-3UTR CAA 90 bp | CTTGCATTTAATAAGTCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCAATGATGCTGTCGATGTaGAGTTTGTCGATATCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LAFNKSETILSTWHCTRAMMLSM*SLSISA Trigger: GGCGGATATCGACAAACTCAACATCGACAGCATCAT...TGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGACTTATTAAATGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCTGTCCACAAAGGGAACAGAGGTTCAAAACAAAATGCTCTCTTGAGAATATGATGCTGTCGATGTaGAGTTTGTCGATATCCGCC | + |
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Preference number: 5 (lower is better) Translates to: QSCPQREQRFKTKCSLENMMLSM*SLSISA Trigger: GGCGGATATCGACAAACTCAACATCGACAGCATCAT...ATTCTCAAGAGAGCATTTTGTTTTGAACCTCTGTTCCCTTTGTGGACAGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| CDS-3UTR CAA 90 bp | TCTGAAACCATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATATCACAAAGAAGACCTaGATCTGGTACATCAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: SETILSTWHCTRASVQTDITKKT*IWYISW Trigger: CCAACTGATGTACCAGATCAAGGTCTTCTTTGTGAT...ATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAATGGTTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| CDS-3UTR CAA 90 bp | TATAAGCCTCAATGTCACCGCAGAATAAAGAATGTAGCCAAAGAAAGCATTATCCACTTCCAGCAGCCGTaGGATGATGCTGTCGATGTT | + |
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Preference number: 5 (lower is better) Translates to: YKPQCHRRIKNVAKESIIHFQQP*DDAVDV Trigger: AACATCGACAGCATCATCCAACGGCTGCTGGAAGTG...GATAATGCTTTCTTTGGCTACATTCTTTATTCTGCGGTGACATTGAGGCTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| CDS-3UTR CAA 90 bp | CATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACAGGTCGTAGTATGTCACCACATATCTaGAGTGGTGCTTCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: HGIVHGHLCKQIHLTGRSMSPHI*SGASSS Trigger: AGAACTTGAAGCACCACTCAAGATATGTGGTGACAT...ACTACGACCTGTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| CDS-3UTR CAA 90 bp | TGTTTCTATAATTTGAAGCTTTCTGAATGGACGGGTTCAGGCCTGATCCAACCCATGTCACCACATATCTaGAGTGGTGCTTCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: CFYNLKLSEWTGSGLIQPMSPHI*SGASSS Trigger: AGAACTTGAAGCACCACTCAAGATATGTGGTGACAT...GGGTTGGATCAGGCCTGAACCCGTCCATTCAGAAAGCTTCAAATTATAGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132555.8 |
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| CDS-3UTR CAA 90 bp | AGCACATCACAGTTTAAAAAGGAAGGTTATGAACGCTATGTTACAAGTCCCAACATGATGCTGTCGATGTaGAGTTTGTCGATATCCGCC | + |
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Preference number: 5 (lower is better) Translates to: STSQFKKEGYERYVTSPNMMLSM*SLSISA Trigger: GGCGGATATCGACAAACTCAACATCGACAGCATCAT...GTTGGGACTTGTAACATAGCGTTCATAACCTTCCTTTTTAAACTGTGATGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| CDS-3UTR CAA 90 bp | ATTCTCAGCACATGGCATTGTACACGGGCATCTGTGCAAACAGATTCATTTAACATCACAAAGAAGACCTaGATCTGGTACATCAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: ILSTWHCTRASVQTDSFNITKKT*IWYISW Trigger: CCAACTGATGTACCAGATCAAGGTCTTCTTTGTGAT...GTTAAATGAATCTGTTTGCACAGATGCCCGTGTACAATGCCATGTGCTGAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086294.11 ENSMUST00000102528.11 ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| CDS-3UTR CAA 90 bp | CAACAGAATGCATTTATGACAATTACATGTAGAGACTCACGCACTCTAAGGCTCATGTCACCACATATCTaGAGTGGTGCTTCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: QQNAFMTITCRDSRTLRLMSPHI*SGASSS Trigger: AGAACTTGAAGCACCACTCAAGATATGTGGTGACAT...GAGCCTTAGAGTGCGTGAGTCTCTACATGTAATTGTCATAAATGCATTCTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102528.11 ENSMUST00000128309.8 |
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| CDS GCA 72 bp | CCACCAAAATCAACAAGGAGCCTCGGCTCACACCCATaGTCTAAGTGTACATGTAAAGTCAAAGTCAGTACC | + |
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Preference number: 6 (lower is better) Translates to: PPKSTRSLGSHP*SKCTCKVKVST Trigger: GGTACTGACTTTGACTTTACATGTACACTTAGAGCATGGGTGTGAGCCGAGGCTCCTTGTTGATTTTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
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| CDS TCA 72 bp | TGCTCTAAGTGTACATGTAAAGTCAAAGTCAGTACCTaGTGGGCTCTACATATAAGATCCAAATCATGCTTA | + |
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Preference number: 6 (lower is better) Translates to: CSKCTCKVKVST*WALHIRSKSCL Trigger: TAAGCATGATTTGGATCTTATATGTAGAGCCCATCAGGTACTGACTTTGACTTTACATGTACACTTAGAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128309.8 ENSMUST00000132555.8 |
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