Pregenerated sensors for PPP1CB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014956Ensembl transcript IDs: ENSMUST00000015100.15, ENSMUST00000201360.4, ENSMUST00000201880.2, ENSMUST00000202078.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTCAGTGGCACTCTTTTCCAGTCTCCCTCCCACGTCCAAGCTCTaGGACTGGAGTGTGGGTTGGGCTCTAGATGGGTTTAGGGTTGAA | + |
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Preference number: 1 (lower is better) Translates to: HSVALFSSLPPTSKL*DWSVGWALDGFRVE Trigger: TTCAACCCTAAACCCATCTAGAGCCCAACCCACACTCCAGTCTCAGAGCTTGGACGTGGGAGGGAGACTGGAAAAGAGTGCCACTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR TCA 90 bp | AAACCATTATGGGTCAAAAGTTCCTCAGCTTGGGGCAGGGCTTTGTaGGCCCATCAGCCATGCGTCCTAGATGCTGACAGGCTCGACTCT | + |
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Preference number: 1 (lower is better) Translates to: KPLWVKSSSAWGRAL*AHQPCVLDADRLDS Trigger: AGAGTCGAGCCTGTCAGCATCTAGGACGCATGGCTGATGGGCTCACAAAGCCCTGCCCCAAGCTGAGGAACTTTTGACCCATAATGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR GCA 90 bp | TTGCCTATATGTATGTCTATGTACCCACCATGTGTGCCATGTGTGTaGCTGGTGCCCTCAGAGGGCATAAAACAGCAGATCCCCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LPICMSMYPPCVPCV*LVPSEGIKQQIPLA Trigger: AGCCAAGGGGATCTGCTGTTTTATGCCCTCTGAGGGCACCAGGCACACACATGGCACACATGGTGGGTACATAGACATACATATAGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR GCA 90 bp | GGGCTGGAGTTAAGAGCACTTGTTGCTCTTGCACAGGATCCAGGCTaGATTCCTAACACCCATGATGACTCACAACATCCATACATCCAA | + |
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Preference number: 1 (lower is better) Translates to: GLELRALVALAQDPG*IPNTHDDSQHPYIQ Trigger: TTGGATGTATGGATGTTGTGAGTCATCATGGGTGTTAGGAATGCAGCCTGGATCCTGTGCAAGAGCAACAAGTGCTCTTAACTCCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR GCA 90 bp | GCCAGTGAACTATGCATTTCTTTCCGTTATTTCTTACAGAGGAACTaGTGTGGATCTCTGTTGGCCATGGCACACCAGACACAGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: ASELCISFRYFLQRN*CGSLLAMAHQTQLS Trigger: AGAAAGCTGTGTCTGGTGTGCCATGGCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACGGAAAGAAATGCATAGTTCACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR CCA 90 bp | GGCATCCAATTCCATTACAGATGGTTGGGTCCATCATGTGGTTACTaGGAATTGAACTCAGGACCTCTGGAAGAACAATCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: GIQFHYRWLGPSCGY*ELNSGPLEEQSVLL Trigger: TAAGAGCACTGATTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGTAACCACATGATGGACCCAACCATCTGTAATGGAATTGGATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR GCA 90 bp | GGTGAGGGTAATACCAGAAAGTTAAGCATGCCAAAAGGTGTTTCGTaGGAATTAGAACCCAAAGCCAAAGTACCACATAATCACATTACC | + |
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Preference number: 1 (lower is better) Translates to: GEGNTRKLSMPKGVS*ELEPKAKVPHNHIT Trigger: GGTAATGTGATTATGTGGTACTTTGGCTTTGGGTTCTAATTCGCACGAAACACCTTTTGGCATGCTTAACTTTCTGGTATTACCCTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR CCA 90 bp | CGTGCCAGCAGTAAAGGAGCAATCATTTTTAAATCTGTGATTCATTaGATGTTGGTATGTCTGACATTACCATGCATCACTCTAGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: RASSKGAIIFKSVIH*MLVCLTLPCITLGN Trigger: ATTTCCTAGAGTGATGCATGGTAATGTCAGACATACCAACATCCAATGAATCACAGATTTAAAAATGATTGCTCCTTTACTGCTGGCACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR CCA 90 bp | CTGTTCTTGAGGGAAAGACACAAATTTTTCGGTATCCAGATACAATaGAGTTTTATAAGTATCTGTCAAACCACAGAATGCCTTCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: LFLRERHKFFGIQIQ*SFISICQTTECLPF Trigger: GAAGGGAAGGCATTCTGTGGTTTGACAGATACTTATAAAACTCCATTGTATCTGGATACCGAAAAATTTGTGTCTTTCCCTCAAGAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR TCA 90 bp | AGTATCTGTCAAACCACAGAATGCCTTCCCTTCACCTTTTTATCTTaGACTTCCACATTATACTTTAAAGCTCATGAGCAGGTTTTGAAC | + |
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Preference number: 1 (lower is better) Translates to: SICQTTECLPFTFLS*TSTLYFKAHEQVLN Trigger: GTTCAAAACCTGCTCATGAGCTTTAAAGTATAATGTGGAAGTTCAAGATAAAAAGGTGAAGGGAAGGCATTCTGTGGTTTGACAGATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR TCA 90 bp | GGTGTCGAATGGCTGGATGGTTTTACAGTGCACACTTATATATTATaGAGTATGTCCTTAACAAATCTGATGGTTTCTCTTTCTAGAATT | + |
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Preference number: 1 (lower is better) Translates to: GVEWLDGFTVHTYIL*SMSLTNLMVSLSRI Trigger: AATTCTAGAAAGAGAAACCATCAGATTTGTTAAGGACATACTTCATAATATATAAGTGTGCACTGTAAAACCATCCAGCCATTCGACACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 ENSMUST00000201880.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTCAAAAGTTCCTCAGCTTGGGGCAGGGCTTTGTGAGCCCATCAGCCATGCGAGGGTGTCGAATGGCTaGATGGTTTTACAGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: GSKVPQLGAGLCEPISHARVSNG*MVLQCT Trigger: TGTGCACTGTAAAACCATCCAGCCATTCGACACCCT...CGCATGGCTGATGGGCTCACAAAGCCCTGCCCCAAGCTGAGGAACTTTTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCACTCAGTGGCACTCTTTTCCAGTCTCCCTCCCACGTCCAAGCTCTGAGGTTAAGAGCACTTGTTaGTCTTGCACAGGATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CATQWHSFPVSLPRPSSEVKSTC*SCTGSR Trigger: CCTGGATCCTGTGCAAGAGCAACAAGTGCTCTTAAC...CTCAGAGCTTGGACGTGGGAGGGAGACTGGAAAAGAGTGCCACTGAGTGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTGCATCCATGAACATGGGTGTGGAGCAACTCAGCACCAGCTACCCCTCTTCACCTGTCTCTGTCTaGCTCACCAATCATGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KVASMNMGVEQLSTSYPSSPVSV*LTNHGV Trigger: AACCCCATGATTGGTGAGGCAGACAGAGACAGGTGA...AGAGGGGTAGCTGGTGCTGAGTTGCTCCACACCCATGTTCATGGATGCAACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTGCATCCATGAACATGGGTGTGGAGCAACTCAGCACCAGCTACCCCTCTCCAAAAGGTGTTTCGTaGGAATTAGAACCCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: KVASMNMGVEQLSTSYPSPKGVS*ELEPKA Trigger: GGCTTTGGGTTCTAATTCGCACGAAACACCTTTTGG...AGAGGGGTAGCTGGTGCTGAGTTGCTCCACACCCATGTTCATGGATGCAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCACTCAGTGGCACTCTTTTCCAGTCTCCCTCCCACGTCCAAGCTCTGAGCTCAGAGACTGTCTATaGTTCAGTCTATGTCAACTT | + |
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Preference number: 2 (lower is better) Translates to: CATQWHSFPVSLPRPSSELRDCL*FSLCQL Trigger: AAGTTGACATAGACTGAAGCATAGACAGTCTCTGAG...CTCAGAGCTTGGACGTGGGAGGGAGACTGGAAAAGAGTGCCACTGAGTGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGCAGGGGCTGGAGTTAAGAGCACTTGTTGCTCTTGCACAGGATCCAGGCATAGAACCCAGGGTGTaGGGGACTTTTGAGATAGCA | + |
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Preference number: 2 (lower is better) Translates to: FKQGLELRALVALAQDPGIEPRV*GTFEIA Trigger: TGCTATCTCAAAAGTCCCCCACACCCTGGGTTCTAT...GCCTGGATCCTGTGCAAGAGCAACAAGTGCTCTTAACTCCAGCCCCTGCTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR CCA 90 bp | ACCTTACAGATCCTGTACTTAACACTACTTGGGAGACACTGTTGTGGCCACTGTGCTGTGGATCTCTGTTaGCCATGGCACACCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: TLQILYLTLLGRHCCGHCAVDLC*PWHTRH Trigger: GTGTCTGGTGTGCCATGGCCAACAGAGATCCACAGC...ACAGTGGCCACAACAGTGTCTCCCAAGTAGTGTTAAGTACAGGATCTGTAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCTAAGGCAGGAGACTAGAGCTGGAAGCCAACCTGGACTTGACTCTGTCTCTCAACGACAAAAACAGTaGCAACTGCTCCAATCAAAA | + |
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Preference number: 2 (lower is better) Translates to: ELRQETRAGSQPGLDSVSQRQKQ*QLLQSK Trigger: TTTTGATTGGAGCAGTTGTCACTGTTTTTGTCGTTG...AGAGACAGAGTCAAGTCCAGGTTGGCTTCCAGCTCTAGTCTCCTGCCTTAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR GCA 90 bp | CCCATGATGACTCACAACATCCATACATCCAATTCTAGAAGATTCAACACACCCTGTACCCACCATGTGTaGCATGTGTGTGCCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: PMMTHNIHTSNSRRFNTPCTHHV*HVCAWC Trigger: GCACCAGGCACACACATGGCACACATGGTGGGTACA...GGGTGTGTTGAATCTTCTAGAATTGGATGTATGGATGTTGTGAGTCATCATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGCAGGGGCTGGAGTTAAGAGCACTTGTTGCTCTTGCACAGGATCCAGGCCTTAAGTTAAAGGTGTaGCATCATAAAGGGTGTCGA | + |
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Preference number: 2 (lower is better) Translates to: FKQGLELRALVALAQDPGLKLKV*HHKGCR Trigger: TCGACACCCTTTATGATGTCACACCTTTAACTTAAG...GCCTGGATCCTGTGCAAGAGCAACAAGTGCTCTTAACTCCAGCCCCTGCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR TCA 90 bp | ATTATGGGTCAAAAGTTCCTCAGCTTGGGGCAGGGCTTTGTGAGCCCATCAGCCACTTTTGCACTGTGCTaGAAATCAAATGTTACTTGC | + |
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Preference number: 2 (lower is better) Translates to: IMGQKFLSLGQGFVSPSATFALC*KSNVTC Trigger: GCAAGTAACATTTGATTTTCAGCACAGTGCAAAAGT...GGCTGATGGGCTCACAAAGCCCTGCCCCAAGCTGAGGAACTTTTGACCCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTGCATCCATGAACATGGGTGTGGAGCAACTCAGCACCAGCTACCCCTCTCAACCAATACTAATTTaGTTACTTTTCGCCCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: KVASMNMGVEQLSTSYPSQPILI*LLFAPS Trigger: ACTAGGGGCGAAAAGTAAGCAAATTAGTATTGGTTG...AGAGGGGTAGCTGGTGCTGAGTTGCTCCACACCCATGTTCATGGATGCAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR GCA 90 bp | GAGACATGTCATGCAGAGACTAAGAAAGGGCCTTTCCCCATGACTGCATCTTTGAGGTTTATGGTGATGTaGATAGCCCAGTGGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: ETCHAETKKGPFPMTASLRFMVM*IAQWGK Trigger: TTTTCCCCACTGGGCTATGCACATCACCATAAACCT...CAAAGATGCAGTCATGGGGAAAGGCCCTTTCTTAGTCTCTGCATGACATGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR CCA 90 bp | GAGACATGTCATGCAGAGACTAAGAAAGGGCCTTTCCCCATGACTGCATCTTTGTGTCGAATGGCTGGATaGTTTTACAGTGCACACTTA | + |
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Preference number: 2 (lower is better) Translates to: ETCHAETKKGPFPMTASLCRMAG*FYSAHL Trigger: TAAGTGTGCACTGTAAAACCATCCAGCCATTCGACA...CAAAGATGCAGTCATGGGGAAAGGCCCTTTCTTAGTCTCTGCATGACATGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTGTTCTTGAGGGAAAGACACAAATTTTTCGGTATCCAGATACAATGGAGTACAGAGGAACTGCTGTaGATCTCTGTTGGCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: HLFLRERHKFFGIQIQWSTEELL*ISVGHG Trigger: GCCATGGCCAACAGAGATCCACAGCAGTTCCTCTGT...ACTCCATTGTATCTGGATACCGAAAAATTTGTGTCTTTCCCTCAAGAACAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAAACCCAACACACACAATGCTCCAAATCAGAATTGACAATTCACTCAGTAGCACTTGTTGCTCTTaGACAGGATCCAGGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: RKNPTHTMLQIRIDNSLSSTCCS*TGSRLH Trigger: ATGCAGCCTGGATCCTGTGCAAGAGCAACAAGTGCT...ACTGAGTGAATTGTCAATTCTGATTTGGAGCATTGTGTGTGTTGGGTTTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR CCA 90 bp | AACCCAACACACACAATGCTCCAAATCAGAATTGACAATTCACTCAGTTTGGGGCTTCATGCTTTCATCTaGGTCACTAACAGGGCTAGT | + |
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Preference number: 2 (lower is better) Translates to: NPTHTMLQIRIDNSLSLGLHAFI*VTNRAS Trigger: ACTAGCCCTGTTAGTGACCCAGATGAAAGCATGAAG...CCCCAAACTGAGTGAATTGTCAATTCTGATTTGGAGCATTGTGTGTGTTGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR CCA 90 bp | ATGCATTTCTTTCCGTTATTTCTTACAGAGGAACTGCTGTGGATCTCTGTTGGCATAAAGGGTGTCGAATaGCTGGATGGTTTTACAGTG | + |
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Preference number: 2 (lower is better) Translates to: MHFFPLFLTEELLWISVGIKGVE*LDGFTV Trigger: CACTGTAAAACCATCCAGCCATTCGACACCCTTTAT...GCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACGGAAAGAAATGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR TCA 90 bp | ATGCATTTCTTTCCGTTATTTCTTACAGAGGAACTGCTGTGGATCTCTGTTGGCCTTAAGTTAAAGGTGTaGCATCATAAAGGGTGTCGA | + |
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Preference number: 2 (lower is better) Translates to: MHFFPLFLTEELLWISVGLKLKV*HHKGCR Trigger: TCGACACCCTTTATGATGTCACACCTTTAACTTAAG...GCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACGGAAAGAAATGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR TCA 90 bp | CCCATGATGACTCACAACATCCATACATCCAATTCTAGAAGATTCAACACACCCGACTTTGCTACTCCTTaGCATTTGTTAATGCTAACC | + |
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Preference number: 2 (lower is better) Translates to: PMMTHNIHTSNSRRFNTPDFATP*HLLMLT Trigger: GGTTAGCATTAACAAATGTCAAGGAGTAGCAAAGTC...GGGTGTGTTGAATCTTCTAGAATTGGATGTATGGATGTTGTGAGTCATCATGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR GCA 90 bp | TTAAGAAGTAGCAAATTGTTCTCTCCAGAGATCCACAATTACCTTACAGATCCTTTCTTACAGAGGAACTaGTGTGGATCTCTGTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LRSSKLFSPEIHNYLTDPFLQRN*CGSLLA Trigger: GGCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAA...AGGATCTGTAAGGTAATTGTGGATCTCTGGAGAGAACAATTTGCTACTTCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTGTTCTTGAGGGAAAGACACAAATTTTTCGGTATCCAGATACAATGGAGTATGTGCATAGCCCAGTaGGGAAAAGCATCATTTGAA | + |
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Preference number: 2 (lower is better) Translates to: HLFLRERHKFFGIQIQWSMCIAQ*GKASFE Trigger: TTCAAATGATGCTTTTCCCCACTGGGCTATGCACAT...ACTCCATTGTATCTGGATACCGAAAAATTTGTGTCTTTCCCTCAAGAACAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR TCA 90 bp | GGTTTTGAACCTTTCCAAAGCTGCTTTATGACCTGTAGGCATTCTCTTAAGAAGGGGAAAAGCATCATTTaGAATCTCATTCAAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GFEPFQSCFMTCRHSLKKGKSII*NLIQRR Trigger: CCTCCTTTGAATGAGATTTCAAATGATGCTTTTCCC...CTTCTTAAGAGAATGCCTACAGGTCATAAAGCAGCTTTGGAAAGGTTCAAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCTTAAGAAGTAGCAAATTGTTCTCTCCAGAGATCCACAATTACCTTACAAGGGTGTCGAATGGCTaGATGGTTTTACAGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: ILLRSSKLFSPEIHNYLTRVSNG*MVLQCT Trigger: TGTGCACTGTAAAACCATCCAGCCATTCGACACCCT...TGTAAGGTAATTGTGGATCTCTGGAGAGAACAATTTGCTACTTCTTAAGAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| 3UTR CAA 90 bp | TTCCTCAGAGACATTCTTGTTTTGGGACATGTGAATAAAGGGAAATaGGAATTGTGTTGTAAATTTCTCCATAAGGTCAACGTGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLRDILVLGHVNKGK*ELCCKFLHKVNVPA Trigger: TGCTGGCACGTTGACCTTATGGAGAAATTTACAACACAATTCCAATTTCCCTTTATTCACATGTCCCAAAACAAGAATGTCTCTGAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR TCA 90 bp | ATAGTCAGTCACTTAAACTATTTTAAACTTAAACTAGCCTCCCCCACAACTCCCCCCAGTCAAACTGTTTaGTTAAAATCAATGGATCAG | + |
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Preference number: 2 (lower is better) Translates to: IVSHLNYFKLKLASPTTPPSQTV*LKSMDQ Trigger: CTGATCCATTGATTTTAATCAAACAGTTTGACTGGG...GGGAGTTGTGGGGGAGGCTAGTTTAAGTTTAAAATAGTTTAAGTGACTGACTAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGCATTATATAAACATTATGTCCATCCTATGAAGCGTACGAATTTGACATGTCGAATGGCTGGATaGTTTTACAGTGCACACTTA | + |
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Preference number: 2 (lower is better) Translates to: RRALYKHYVHPMKRTNLTCRMAG*FYSAHL Trigger: TAAGTGTGCACTGTAAAACCATCCAGCCATTCGACA...TGTCAAATTCGTACGCTTCATAGGATGGACATAATGTTTATATAATGCCCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201880.2 |
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| 3UTR-3UTR CCA 90 bp | CACATAAGAAGGGCATTATATAAACATTATGTCCATCCTATGAAGCGTACGAATTGTCGAATGGCTGGATaGTTTTACAGTGCACACTTA | + |
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Preference number: 2 (lower is better) Translates to: HIRRALYKHYVHPMKRTNCRMAG*FYSAHL Trigger: TAAGTGTGCACTGTAAAACCATCCAGCCATTCGACA...ATTCGTACGCTTCATAGGATGGACATAATGTTTATATAATGCCCTTCTTATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201880.2 |
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| 3UTR-3UTR CCA 90 bp | CACATAAGAAGGGCATTATATAAACATTATGTCCATCCTATGAAGCGTACGAATATAAAGGGTGTCGAATaGCTGGATGGTTTTACAGTG | + |
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Preference number: 2 (lower is better) Translates to: HIRRALYKHYVHPMKRTNIKGVE*LDGFTV Trigger: CACTGTAAAACCATCCAGCCATTCGACACCCTTTAT...ATTCGTACGCTTCATAGGATGGACATAATGTTTATATAATGCCCTTCTTATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201880.2 |
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| 3UTR CAA 90 bp | AGCAGTAAAGGAGCAATCATTTTTAAATCTGTGATTCATTGGATGTaGGTATGTCTGACATTACCATGCATCACTCTAGGAAATACCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSKGAIIFKSVIHWM*VCLTLPCITLGNTS Trigger: TGAGGTATTTCCTAGAGTGATGCATGGTAATGTCAGACATACCAACATCCAATGAATCACAGATTTAAAAATGATTGCTCCTTTACTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR TCA 90 bp | CACATAAGAAGGGCATTATATAAACATTATGTCCATCCTATGAAGCGTACGAATCTTAAGTTAAAGGTGTaGCATCATAAAGGGTGTCGA | + |
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Preference number: 2 (lower is better) Translates to: HIRRALYKHYVHPMKRTNLKLKV*HHKGCR Trigger: TCGACACCCTTTATGATGTCACACCTTTAACTTAAG...ATTCGTACGCTTCATAGGATGGACATAATGTTTATATAATGCCCTTCTTATGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201880.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGCCACTCAGTGGCACTCTTTTCCAGTCTCCCTCCCACGTCCAAGCTCTGAGGAGCACTTGTTGCTCTaGCACAGGATCCAGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: CATQWHSFPVSLPRPSSEEHLLL*HRIQAA Trigger: TGCAGCCTGGATCCTGTGCAAGAGCAACAAGTGCTC...CTCAGAGCTTGGACGTGGGAGGGAGACTGGAAAAGAGTGCCACTGAGTGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR TCA 72 bp | TGGGTCAAAAGTTCCTCAGCTTGGGGCAGGGCTTTGTaGGCCCATCAGCCATGCGTCCTAGATGCTGACAGG | + |
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Preference number: 3 (lower is better) Translates to: WVKSSSAWGRAL*AHQPCVLDADR Trigger: CCTGTCAGCATCTAGGACGCATGGCTGATGGGCTCACAAAGCCCTGCCCCAAGCTGAGGAACTTTTGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR GCA 72 bp | CTGCAGGTAGCCACAGTTTATGAGTGTGTCATGCTGTaGCACTCAGTGGCACTCTTTTCCAGTCTCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LQVATVYECVML*HSVALFSSLPP Trigger: GGGAGGGAGACTGGAAAAGAGTGCCACTGAGTGGCACAGCATGACACACTCATAAACTGTGGCTACCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR CCA 72 bp | CCACAGTTTATGAGTGTGTCATGCTGTGCCACTCAGTaGCACTCTTTTCCAGTCTCCCTCCCACGTCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: PQFMSVSCCATQ*HSFPVSLPRPS Trigger: GCTTGGACGTGGGAGGGAGACTGGAAAAGAGTGCCACTGAGTGGCACAGCATGACACACTCATAAACTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| 3UTR-3UTR CAA 90 bp | AACCCAGCATGGATCCCACCTACAGTGTCAGCACTCACAGAGCTAAGGCAGGAGCCAGCTATCCAAGGCTaGTCAAAAAGGATTCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: NPAWIPPTVSALTELRQEPAIQG*SKRILM Trigger: CATGAGAATCCTTTTTGACAAGCCTTGGATAGCTGG...CTCCTGCCTTAGCTCTGTGAGTGCTGACACTGTAGGTGGGATCCATGCTGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR TCA 72 bp | ACAGATGGTTGGGTCCATCATGTGGTTACTGGGAATTaGACTCAGGACCTCTGGAAGAACAATCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TDGWVHHVVTGN*TQDLWKNNQCS Trigger: AGAGCACTGATTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGTAACCACATGATGGACCCAACCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR TCA 72 bp | GTTGTGGCCACTGTTCCAGGGCTGGTAGTCTGCCAGTaGACTATGCATTTCTTTCCGTTATTTCTTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VVATVPGLVVCQ*TMHFFPLFLTE Trigger: CTCTGTAAGAAATAACGGAAAGAAATGCATAGTTCACTGGCAGACTACCAGCCCTGGAACAGTGGCCACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR GCA 72 bp | TTAAGAGCACTTGTTGCTCTTGCACAGGATCCAGGCTaGATTCCTAACACCCATGATGACTCACAACATCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRALVALAQDPG*IPNTHDDSQHP Trigger: TGGATGTTGTGAGTCATCATGGGTGTTAGGAATGCAGCCTGGATCCTGTGCAAGAGCAACAAGTGCTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR CCA 72 bp | GACACACCAGAAGAGGGCATCCAATTCCATTACAGATaGTTGGGTCCATCATGTGGTTACTGGGAATTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: DTPEEGIQFHYR*LGPSCGYWELN Trigger: GTTCAATTCCCAGTAACCACATGATGGACCCAACCATCTGTAATGGAATTGGATGCCCTCTTCTGGTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR CCA 72 bp | GTTATTTCTTACAGAGGAACTGCTGTGGATCTCTGTTaGCCATGGCACACCAGACACAGCTTTCTGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VISYRGTAVDLC*PWHTRHSFLSL Trigger: CAAAGACAGAAAGCTGTGTCTGGTGTGCCATGGCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR TCA 72 bp | TTTTCCCCACAGGTTCCACCTAGACAGTTAGGTAATTaGGCCAACATGGAAGTCTGTTTGTATGGCTCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FSPQVPPRQLGN*ANMEVCLYGSR Trigger: TCTCGAGCCATACAAACAGACTTCCATGTTGGCTCAATTACCTAACTGTCTAGGTGGAACCTGTGGGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR GCA 72 bp | CTATGCATTTCTTTCCGTTATTTCTTACAGAGGAACTaGTGTGGATCTCTGTTGGCCATGGCACACCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LCISFRYFLQRN*CGSLLAMAHQT Trigger: TGTCTGGTGTGCCATGGCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACGGAAAGAAATGCATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR CCA 72 bp | CATCCAATTCCATTACAGATGGTTGGGTCCATCATGTaGTTACTGGGAATTGAACTCAGGACCTCTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HPIPLQMVGSIM*LLGIELRTSGR Trigger: TCTTCCAGAGGTCCTGAGTTCAATTCCCAGTAACCACATGATGGACCCAACCATCTGTAATGGAATTGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGATGACTCACAACATCCATACATCCAATTCTAGAAGATTCAACACACCCGAAGCCAACCTAGACTaGGCTGTTTTAACCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PMMTHNIHTSNSRRFNTPEANLD*AVLTQH Trigger: ATGCTGGGTTAAAACAGCCAAGTCTAGGTTGGCTTC...GGGTGTGTTGAATCTTCTAGAATTGGATGTATGGATGTTGTGAGTCATCATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR-3UTR CAA 90 bp | TGCATTTCTTTCCGTTATTTCTTACAGAGGAACTGCTGTGGATCTCTGTTGGCCTCATTCAAAGGAGGATaGTTTTCCCCACAGGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CISFRYFLQRNCCGSLLASFKGG*FSPQVP Trigger: TGGAACCTGTGGGGAAAACAATCCTCCTTTGAATGA...GGCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACGGAAAGAAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR CCA 72 bp | TTCCATTACAGATGGTTGGGTCCATCATGTGGTTACTaGGAATTGAACTCAGGACCTCTGGAAGAACAATCA | + |
|
Preference number: 3 (lower is better) Translates to: FHYRWLGPSCGY*ELNSGPLEEQS Trigger: TGATTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGTAACCACATGATGGACCCAACCATCTGTAATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR TCA 72 bp | CTCCCAAAGGTTTTAAGGCCAAACTTGACACAGTCTTaGAGGAAAAACCCAACACACACAATGCTCCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: LPKVLRPNLTQS*RKNPTHTMLQI Trigger: GATTTGGAGCATTGTGTGTGTTGGGTTTTTCCTTCAAGACTGTGTCAAGTTTGGCCTTAAAACCTTTGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR CCA 72 bp | AACCACATTACACAGATGGATCTTCATGCTTTCATCTaGGTCACTAACAGGGCTAGTTTAACTGGGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NHITQMDLHAFI*VTNRASLTGML Trigger: AAGCATCCCAGTTAAACTAGCCCTGTTAGTGACCCAGATGAAAGCATGAAGATCCATCTGTGTAATGTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR TCA 72 bp | TTGTTAATGCTAACCCGTCTCCTTAAGTTAAAGGTGTaGCATCATAAAGGGTGTCGAATGGCTGGATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLMLTRLLKLKV*HHKGCRMAGWF Trigger: AAACCATCCAGCCATTCGACACCCTTTATGATGTCACACCTTTAACTTAAGGAGACGGGTTAGCATTAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201880.2 |
||
| 3UTR TCA 72 bp | TTTAAGATCCTTTACCGTCTCCTTAAGTTAAAGGTGTaGCATCATAAAGGGTGTCGAATGGCTGGATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FKILYRLLKLKV*HHKGCRMAGWF Trigger: AAACCATCCAGCCATTCGACACCCTTTATGATGTCACACCTTTAACTTAAGGAGACGGTAAAGGATCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR TCA 72 bp | CATGAGCAGGTTTTGAACCTTTCCAAAGCTGCTTTATaGCCTGTAGGCATTCTCTTAAGAAGTAGCAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: HEQVLNLSKAAL*PVGILLRSSKL Trigger: CAATTTGCTACTTCTTAAGAGAATGCCTACAGGTCATAAAGCAGCTTTGGAAAGGTTCAAAACCTGCTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCAAATTGTTCTCTCCAGAGATCCACAATTACCTTACAGATCCTGTACTTGGGGAAAAGCATCATTaGAAATCTCATTCAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSKLFSPEIHNYLTDPVLGEKHH*KSHSKE Trigger: CTCCTTTGAATGAGATTTCAAATGATGCTTTTCCCC...AAGTACAGGATCTGTAAGGTAATTGTGGATCTCTGGAGAGAACAATTTGCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR GCA 72 bp | AATACCAGAAAGTTAAGCATGCCAAAAGGTGTTTCGTaGGAATTAGAACCCAAAGCCAAAGTACCACATAAT | + |
|
Preference number: 3 (lower is better) Translates to: NTRKLSMPKGVS*ELEPKAKVPHN Trigger: ATTATGTGGTACTTTGGCTTTGGGTTCTAATTCGCACGAAACACCTTTTGGCATGCTTAACTTTCTGGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR TCA 72 bp | TGTAATGTTAGCAATAATCGGTTAGACACCTGTTCTTaGGGGAAAGACACAAATTTTTCGGTATCCAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: CNVSNNRLDTCS*GKDTNFSVSRY Trigger: GTATCTGGATACCGAAAAATTTGTGTCTTTCCCTCAAGAACAGGTGTCTAACCGATTATTGCTAACATTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR CAA 72 bp | CCCTCAGAAACCATTATGGGTCAAAAGTTCCTCAGCTaGGGGCAGGGCTTTGTGAGCCCATCAGCCATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSETIMGQKFLS*GQGFVSPSAMR Trigger: ACGCATGGCTGATGGGCTCACAAAGCCCTGCCCCAAGCTGAGGAACTTTTGACCCATAATGGTTTCTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR TCA 90 bp | GCTGTTCGAGGCGGAGTGACAGGACGTCCAGAATTCAGCCCACCATACTGGTACGGTGACAGTCCTCCATaGCAACAGAAGATTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVRGGVTGRPEFSPPYWYGDSPP*QQKIFS Trigger: TGAGAAAATCTTCTGTTGTCATGGAGGACTGTCACC...GTACCAGTATGGTGGGCTGAATTCTGGACGTCCTGTCACTCCGCCTCGAACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202078.2 |
||
| CDS-3UTR TCA 90 bp | GAGACATGTCATGCAGAGACTAAGAAAGGGCCTTTCCCCATGACTGCATCTTTGCTGTTCGAGGCGGAGTaGCAGGACGTCCAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETCHAETKKGPFPMTASLLFEAE*QDVQNS Trigger: TGAATTCTGGACGTCCTGTCACTCCGCCTCGAACAG...CAAAGATGCAGTCATGGGGAAAGGCCCTTTCTTAGTCTCTGCATGACATGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR GCA 90 bp | GAGACTAGAGCTGGAAGCCAACCTAGACTTGGCTGTTTTAACCCAGCATGGATCTTTTCTCCCCAGCCTTaGACATCCTTATCTGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ETRAGSQPRLGCFNPAWIFSPQP*TSLSGS Trigger: CGACCCAGATAAGGATGTGCAAGGCTGGGGAGAAAA...GATCCATGCTGGGTTAAAACAGCCAAGTCTAGGTTGGCTTCCAGCTCTAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAGGCAGGAGACTAGAGCTGGAAGCCAACCTGGACTTGACTCTGTCTCTTTGTACAATCTTTCCTaGACGACATCCTCGTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELRQETRAGSQPGLDSVSLYNLS*TTSSYL Trigger: GAGGTACGAGGATGTCGTCCAGGAAAGATTGTACAA...AGAGACAGAGTCAAGTCCAGGTTGGCTTCCAGCTCTAGTCTCCTGCCTTAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR TCA 90 bp | ATTATGGGTCAAAAGTTCCTCAGCTTGGGGCAGGGCTTTGTGAGCCCATCAGCCAGTTCTCCGGGTATTTaGTTTTGTAAGCCAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IMGQKFLSLGQGFVSPSASSPGI*FCKPIA Trigger: TGCTATTGGCTTACAAAATCAAATACCCGGAGAACT...GGCTGATGGGCTCACAAAGCCCTGCCCCAAGCTGAGGAACTTTTGACCCATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR CCA 90 bp | ATTATGGGTCAAAAGTTCCTCAGCTTGGGGCAGGGCTTTGTGAGCCCATCAGCCTTCAGCCCACCATACTaGTACTTAGCTTTCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IMGQKFLSLGQGFVSPSAFSPPY*YLAFFS Trigger: TGAAAAGAAAGCTAAGTACCAGTATGGTGGGCTGAA...GGCTGATGGGCTCACAAAGCCCTGCCCCAAGCTGAGGAACTTTTGACCCATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| 3UTR CAA 72 bp | CGTTATTTCTTACAGAGGAACTGCTGTGGATCTCTGTaGGCCATGGCACACCAGACACAGCTTTCTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYFLQRNCCGSL*AMAHQTQLSVF Trigger: AAAGACAGAAAGCTGTGTCTGGTGTGCCATGGCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAACCCAACACACACAATGCTCCAAATCAGAATTGACAATTCACTCAGTCTGTTCGAGGCGGAGTaGCAGGACGTCCAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKNPTHTMLQIRIDNSLSLFEAE*QDVQNS Trigger: TGAATTCTGGACGTCCTGTCACTCCGCCTCGAACAG...ACTGAGTGAATTGTCAATTCTGATTTGGAGCATTGTGTGTGTTGGGTTTTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGACGCTATAAGGTTTCACACATCTATGGTAACACATAAGAAGGGCATTCTGTTCGAGGCGGAGTaGCAGGACGTCCAGAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKDAIRFHTSMVTHKKGILFEAE*QDVQNS Trigger: TGAATTCTGGACGTCCTGTCACTCCGCCTCGAACAG...AATGCCCTTCTTATGTGTTACCATAGATGTGTGAAACCTTATAGCGTCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201880.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTAGAAGATTCAACACACCCACCAGGCACCCATGTGGTGCACACACATACACAACCCTCGGACTTCTaGTTCAGTCATTTGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILEDSTHPPGTHVVHTHTQPSDF*FSHLYN Trigger: ATTGTACAAATGACTGAAGCAGAAGTCCGAGGGTTG...TGTATGTGTGTGCACCACATGGGTGCCTGGTGGGTGTGTTGAATCTTCTAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR CCA 90 bp | TGTGACATCATAAAGGGTGTCGAATGGCTGGATGGTTTTACAGTGCACACTTATTCACCTTTTCTTCGGTaGATTAGCTGTTCGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CDIIKGVEWLDGFTVHTYSPFLR*ISCSRR Trigger: CCGCCTCGAACAGCTAATCCACCGAAGAAAAGGTGA...ATAAGTGTGCACTGTAAAACCATCCAGCCATTCGACACCCTTTATGATGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 ENSMUST00000201880.2 |
||
| CDS-3UTR TCA 90 bp | TGCATTTCTTTCCGTTATTTCTTACAGAGGAACTGCTGTGGATCTCTGTTGGCCGGTGACAGTCCTCCATaGCAACAGAAGATTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CISFRYFLQRNCCGSLLAGDSPP*QQKIFS Trigger: TGAGAAAATCTTCTGTTGTCATGGAGGACTGTCACC...GGCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACGGAAAGAAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR CCA 90 bp | ATTCTAGAAGATTCAACACACCCACCAGGCACCCATGTGGTGCACACACATACACTAAGAAAAGATAGTTaGCTTCTGGTGGAAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILEDSTHPPGTHVVHTHTLRKDS*LLVENL Trigger: GAGGTTTTCCACCAGAAGCCAACTATCTTTTCTTAG...TGTATGTGTGTGCACCACATGGGTGCCTGGTGGGTGTGTTGAATCTTCTAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR CCA 90 bp | ATTCTAGAAGATTCAACACACCCACCAGGCACCCATGTGGTGCACACACATACAATGCTAGCACACTCATaGTTTCCTCTTAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILEDSTHPPGTHVVHTHTMLAHS*FPLRRK Trigger: CTTTCTTCTAAGAGGAAACCATGAGTGTGCTAGCAT...TGTATGTGTGTGCACCACATGGGTGCCTGGTGGGTGTGTTGAATCTTCTAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR CCA 90 bp | ATGCATTTCTTTCCGTTATTTCTTACAGAGGAACTGCTGTGGATCTCTGTTGGCTTGTACAATCTTTCCTaGACGACATCCTCGTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: MHFFPLFLTEELLWISVGLYNLS*TTSSYL Trigger: GAGGTACGAGGATGTCGTCCAGGAAAGATTGTACAA...GCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACGGAAAGAAATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR CCA 90 bp | GCAGAGACTAAGAAAGGGCCTTTCCCCATGACTGCATCTTTGGTAGATGCTTTTTTCAGCCCACCATACTaGTACTTAGCTTTCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AETKKGPFPMTASLVDAFFSPPY*YLAFFS Trigger: TGAAAAGAAAGCTAAGTACCAGTATGGTGGGCTGAA...AAAAGCATCTACCAAAGATGCAGTCATGGGGAAAGGCCCTTTCTTAGTCTCTGC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| 3UTR CAA 72 bp | CCTCCCAAAGGTTTTAAGGCCAAACTTGACACAGTCTaGAAGGAAAAACCCAACACACACAATGCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPKGFKAKLDTV*KEKPNTHNAPN Trigger: ATTTGGAGCATTGTGTGTGTTGGGTTTTTCCTTCAAGACTGTGTCAAGTTTGGCCTTAAAACCTTTGGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR TCA 90 bp | GCAGAGACTAAGAAAGGGCCTTTCCCCATGACTGCATCTTTGGTAGATGCTTTTGATTCAGAAATTTACTaGCTACATCAGCTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AETKKGPFPMTASLVDAFDSEIY*LHQLQK Trigger: CTTTTGGAGCTGATGTAGTCAGTAAATTTCTGAATC...AAAAGCATCTACCAAAGATGCAGTCATGGGGAAAGGCCCTTTCTTAGTCTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR CCA 90 bp | TGCATTTCTTTCCGTTATTTCTTACAGAGGAACTGCTGTGGATCTCTGTTGGCCCTAAGAAAAGATAGTTaGCTTCTGGTGGAAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CISFRYFLQRNCCGSLLALRKDS*LLVENL Trigger: GAGGTTTTCCACCAGAAGCCAACTATCTTTTCTTAG...GGCCAACAGAGATCCACAGCAGTTCCTCTGTAAGAAATAACGGAAAGAAATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR CCA 90 bp | TTAAGAAGTAGCAAATTGTTCTCTCCAGAGATCCACAATTACCTTACAGATCCTTCACCTTTTCTTCGGTaGATTAGCTGTTCGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSSKLFSPEIHNYLTDPSPFLR*ISCSRR Trigger: CCGCCTCGAACAGCTAATCCACCGAAGAAAAGGTGA...AGGATCTGTAAGGTAATTGTGGATCTCTGGAGAGAACAATTTGCTACTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR GCA 90 bp | ACCTTACAGATCCTGTACTTAACACTACTTGGGAGACACTGTTGTGGCCACTGTACAAATCTTCAGTGGTaGTTCCAATTCCAAAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLQILYLTLLGRHCCGHCTNLQW*FQFQKN Trigger: ATTCTTTTGGAATTGGAAGCACCACTGAAGATTTGT...ACAGTGGCCACAACAGTGTCTCCCAAGTAGTGTTAAGTACAGGATCTGTAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR CCA 90 bp | ACCTTACAGATCCTGTACTTAACACTACTTGGGAGACACTGTTGTGGCCACTGTGATGGTTTCAATATCTaGAATGAACACATCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLQILYLTLLGRHCCGHCDGFNI*NEHIKV Trigger: GACTTTGATGTGTTCATTCCAGATATTGAAACCATC...ACAGTGGCCACAACAGTGTCTCCCAAGTAGTGTTAAGTACAGGATCTGTAAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
||
| CDS-3UTR CCA 90 bp | TGTGACATCATAAAGGGTGTCGAATGGCTGGATGGTTTTACAGTGCACACTTATTTCAGCCCACCATACTaGTACTTAGCTTTCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CDIIKGVEWLDGFTVHTYFSPPY*YLAFFS Trigger: TGAAAAGAAAGCTAAGTACCAGTATGGTGGGCTGAA...ATAAGTGTGCACTGTAAAACCATCCAGCCATTCGACACCCTTTATGATGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 ENSMUST00000201880.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGCATTATATAAACATTATGTCCATCCTATGAAGCGTACGAATTTGACATCACCTTTTCTTCGGTaGATTAGCTGTTCGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRALYKHYVHPMKRTNLTSPFLR*ISCSRR Trigger: CCGCCTCGAACAGCTAATCCACCGAAGAAAAGGTGA...TGTCAAATTCGTACGCTTCATAGGATGGACATAATGTTTATATAATGCCCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201880.2 |
||
| CDS-3UTR TCA 90 bp | CCCATGATGACTCACAACATCCATACATCCAATTCTAGAAGATTCAACACACCCGATTCAGAAATTTACTaGCTACATCAGCTCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PMMTHNIHTSNSRRFNTPDSEIY*LHQLQK Trigger: CTTTTGGAGCTGATGTAGTCAGTAAATTTCTGAATC...GGGTGTGTTGAATCTTCTAGAATTGGATGTATGGATGTTGTGAGTCATCATGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGCATTATATAAACATTATGTCCATCCTATGAAGCGTACGAATTTGACAGGTGACAGTCCTCCATaGCAACAGAAGATTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRALYKHYVHPMKRTNLTGDSPP*QQKIFS Trigger: TGAGAAAATCTTCTGTTGTCATGGAGGACTGTCACC...TGTCAAATTCGTACGCTTCATAGGATGGACATAATGTTTATATAATGCCCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
||
| CDS-3UTR GCA 90 bp | GAACTGAGATCTAAAGACAAGAAAGTTTTTATGATGCTCAAACCCCAGATCAGACAACCCTCGGACTTCTaGTTCAGTCATTTGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELRSKDKKVFMMLKPQIRQPSDF*FSHLYN Trigger: ATTGTACAAATGACTGAAGCAGAAGTCCGAGGGTTG...TCTGATCTGGGGTTTGAGCATCATAAAAACTTTCTTGTCTTTAGATCTCAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| CDS-3UTR GCA 90 bp | TGTGACATCATAAAGGGTGTCGAATGGCTGGATGGTTTTACAGTGCACACTTATACAAATCTTCAGTGGTaGTTCCAATTCCAAAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: CDIIKGVEWLDGFTVHTYTNLQW*FQFQKN Trigger: ATTCTTTTGGAATTGGAAGCACCACTGAAGATTTGT...ATAAGTGTGCACTGTAAAACCATCCAGCCATTCGACACCCTTTATGATGTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 |
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| 3UTR CAA 72 bp | GGAGCAATCATTTTTAAATCTGTGATTCATTGGATGTaGGTATGTCTGACATTACCATGCATCACTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: GAIIFKSVIHWM*VCLTLPCITLG Trigger: TCCTAGAGTGATGCATGGTAATGTCAGACATACCAACATCCAATGAATCACAGATTTAAAAATGATTGCTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| CDS-3UTR TCA 90 bp | ATTCTCTTAAGAAGTAGCAAATTGTTCTCTCCAGAGATCCACAATTACCTTACAAGTTCTCCGGGTATTTaGTTTTGTAAGCCAATAGCA | + |
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Preference number: 4 (lower is better) Translates to: ILLRSSKLFSPEIHNYLTSSPGI*FCKPIA Trigger: TGCTATTGGCTTACAAAATCAAATACCCGGAGAACT...TGTAAGGTAATTGTGGATCTCTGGAGAGAACAATTTGCTACTTCTTAAGAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| CDS-3UTR CCA 90 bp | CACATAAGAAGGGCATTATATAAACATTATGTCCATCCTATGAAGCGTACGAATGATGGTTTCAATATCTaGAATGAACACATCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: HIRRALYKHYVHPMKRTNDGFNI*NEHIKV Trigger: GACTTTGATGTGTTCATTCCAGATATTGAAACCATC...ATTCGTACGCTTCATAGGATGGACATAATGTTTATATAATGCCCTTCTTATGTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201880.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTGCATCCATGAACATGGGTGTGGAGCAACTCAGCACCAGCTACCCCTCTTTCTGCTTCAGTCATTaGTACAATCTTTCCTGGACG | + |
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Preference number: 5 (lower is better) Translates to: KVASMNMGVEQLSTSYPSFCFSH*YNLSWT Trigger: CGTCCAGGAAAGATTGTACAAATGACTGAAGCAGAA...AGAGGGGTAGCTGGTGCTGAGTTGCTCCACACCCATGTTCATGGATGCAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| CDS CCA 90 bp | GTTCGAGGCGGAGTGACAGGACGTCCAGAATTCAGCCCACCATACTaGTACTTAGCTTTCTTTTCAGATGGTTTCAATATCTGGAATGAA | + |
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Preference number: 5 (lower is better) Translates to: VRGGVTGRPEFSPPY*YLAFFSDGFNIWNE Trigger: TTCATTCCAGATATTGAAACCATCTGAAAAGAAAGCTAAGTACCAGTATGGTGGGCTGAATTCTGGACGTCCTGTCACTCCGCCTCGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 ENSMUST00000201880.2 |
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| CDS-3UTR CAA 90 bp | CCCATGATGACTCACAACATCCATACATCCAATTCTAGAAGATTCAACACACCCATTTTCTCCCCAGCCTaGCACATCCTTATCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: PMMTHNIHTSNSRRFNTPIFSPA*HILIWV Trigger: GACCCAGATAAGGATGTGCAAGGCTGGGGAGAAAAT...GGGTGTGTTGAATCTTCTAGAATTGGATGTATGGATGTTGTGAGTCATCATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015100.15 |
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| CDS-3UTR CAA 90 bp | GAACTGAGATCTAAAGACAAGAAAGTTTTTATGATGCTCAAACCCCAGATCAGAATTTTCTCCCCAGCCTaGCACATCCTTATCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: ELRSKDKKVFMMLKPQIRIFSPA*HILIWV Trigger: GACCCAGATAAGGATGTGCAAGGCTGGGGAGAAAAT...TCTGATCTGGGGTTTGAGCATCATAAAAACTTTCTTGTCTTTAGATCTCAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| CDS-3UTR CAA 90 bp | CACCTGTTCTTGAGGGAAAGACACAAATTTTTCGGTATCCAGATACAATGGAGTTTCTGCTTCAGTCATTaGTACAATCTTTCCTGGACG | + |
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Preference number: 5 (lower is better) Translates to: HLFLRERHKFFGIQIQWSFCFSH*YNLSWT Trigger: CGTCCAGGAAAGATTGTACAAATGACTGAAGCAGAA...ACTCCATTGTATCTGGATACCGAAAAATTTGTGTCTTTCCCTCAAGAACAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201360.4 |
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| CDS CAA 90 bp | TTCACGAGACTTGATACACAACCCTCGGACTTCTGCTTCAGTCATTaGTACAATCTTTCCTGGACGACATCCTCGTACCTCCAGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: FTRLDTQPSDFCFSH*YNLSWTTSSYLQQA Trigger: CGCCTGCTGGAGGTACGAGGATGTCGTCCAGGAAAGATTGTACAAATGACTGAAGCAGAAGTCCGAGGGTTGTGTATCAAGTCTCGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 |
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| CDS CAA 72 bp | CTTGATACACAACCCTCGGACTTCTGCTTCAGTCATTaGTACAATCTTTCCTGGACGACATCCTCGTACCTC | + |
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Preference number: 6 (lower is better) Translates to: LDTQPSDFCFSH*YNLSWTTSSYL Trigger: GAGGTACGAGGATGTCGTCCAGGAAAGATTGTACAAATGACTGAAGCAGAAGTCCGAGGGTTGTGTATCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 |
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| CDS GCA 72 bp | GATTTCACGAGACTTGATACACAACCCTCGGACTTCTaGTTCAGTCATTTGTACAATCTTTCCTGGACGACA | + |
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Preference number: 6 (lower is better) Translates to: DFTRLDTQPSDF*FSHLYNLSWTT Trigger: TGTCGTCCAGGAAAGATTGTACAAATGACTGAAGCAGAAGTCCGAGGGTTGTGTATCAAGTCTCGTGAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 |
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| CDS GCA 72 bp | ATATTGTCCATGAATGTCTCCACAAATCTTCAGTGGTaGTTCCAATTCCAAAAGAATAGGCTGGCTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ILSMNVSTNLQW*FQFQKNRLAEK Trigger: TTTCTCAGCCAGCCTATTCTTTTGGAATTGGAAGCACCACTGAAGATTTGTGGAGACATTCATGGACAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015100.15 ENSMUST00000201360.4 |
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