Pregenerated sensors for PPOX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062729Ensembl transcript IDs: ENSMUST00000073120.11, ENSMUST00000192956.3
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCCCTCCACGGAGTGACCACTGGCTCCATCGCTCAGCCCGGGCCTaGCGAATTAGTGAGGAATCCGGCTGGGGACTCTGTCCTGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: SPPRSDHWLHRSARA*RISEESGWGLCPAP Trigger: GGGCGCAGGACAGAGTCCCCAGCCGGATTCCTCACTAATTCGTCAGGCCCGGGCTGAGCGATGGAGCCAGTGGTCACTCCGTGGAGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS TCA 90 bp | CCAGGACAGCAACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTaGCAGCAACCCCCTCATAGGAGGCTCCAGCCAAAGTCAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: PGQQLLPGAHSLYSH*QQPPHRRLQPKSGA Trigger: TGCCCCTGACTTTGGCTGGAGCCTCCTATGAGGGGGTTGCTGTCAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTTGCTGTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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| CDS CCA 90 bp | AGGGTGCAGGGTACCGCCTACATACAGGAACCTGTTCTGGGCAGCTaGGTGATCCCCTCGGACAGGCAAGACTTCAGACTCCAAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: RVQGTAYIQEPVLGS*VIPSDRQDFRLQAK Trigger: CTTGGCTTGGAGTCTGAAGTCTTGCCTGTCCGAGGGGATCACCCAGCTGCCCAGAACAGGTTCCTGTATGTAGGCGGTACCCTGCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS GCA 90 bp | GCTAAAGATGCCACCTCAGGTCCAAGGCGGCGCTGGGCAAAACTGTaGACAGTTTCATCAGGCTCTTTGCCCCTGGGCTTCAGCAACTCC | + |
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Preference number: 5 (lower is better) Translates to: AKDATSGPRRRWAKL*TVSSGSLPLGFSNS Trigger: GGAGTTGCTGAAGCCCAGGGGCAAAGAGCCTGATGAAACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACCTGAGGTGGCATCTTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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| CDS GCA 90 bp | GGTTCTTTCAGTCCTAACTGTGTGGCGGCTGCCTCCTGGGCTTGTTaGTGGAACAGCTCTGGAGACAGTTGGTGGCCCGCAGCTTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: GSFSPNCVAAASWAC*WNSSGDSWWPAAFS Trigger: GCTAAAAGCTGCGGGCCACCAACTGTCTCCAGAGCTGTTCCAGCAACAAGCCCAGGAGGCAGCCGCCACACAGTTAGGACTGAAAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS TCA 90 bp | TGCAGGGTACCGCCTACATACAGGAACCTGTTCTGGGCAGCTGGGTaGTCCCCTCGGACAGGCAAGACTTCAGACTCCAAGCCAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: CRVPPTYRNLFWAAG*SPRTGKTSDSKPSS Trigger: TGAACTTGGCTTGGAGTCTGAAGTCTTGCCTGTCCGAGGGGATCACCCAGCTGCCCAGAACAGGTTCCTGTATGTAGGCGGTACCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS CCA 90 bp | GGGAGCAGCTTGCTGAGCTCTGAAGCTGGAATGGCACTTATAATGTaGTCAGCCTCCAGACTGCTGTCCCCTAGAGACACCTTCCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: GSSLLSSEAGMALIM*SASRLLSPRDTFQR Trigger: GCGCTGGAAGGTGTCTCTAGGGGACAGCAGTCTGGAGGCTGACCACATTATAAGTGCCATTCCAGCTTCAGAGCTCAGCAAGCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS CCA 90 bp | TCTTTCAGTCCTAACTGTGTGGCGGCTGCCTCCTGGGCTTGTTGCTaGAACAGCTCTGGAGACAGTTGGTGGCCCGCAGCTTTTAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SFSPNCVAAASWACC*NSSGDSWWPAAFSF Trigger: GAAGCTAAAAGCTGCGGGCCACCAACTGTCTCCAGAGCTGTTCCAGCAACAAGCCCAGGAGGCAGCCGCCACACAGTTAGGACTGAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS TCA 90 bp | AAAAGCCACCGAGTCGTACACAATTCCCAGGACAGTCGGGTCTTCTaGCGATGGCACCAAATGTCCAAATCCCTGGACAGGCAGACAAGC | + |
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Preference number: 5 (lower is better) Translates to: KSHRVVHNSQDSRVF*RWHQMSKSLDRQTS Trigger: GCTTGTCTGCCTGTCCAGGGATTTGGACATTTGGTGCCATCGTCAGAAGACCCGACTGTCCTGGGAATTGTGTACGACTCGGTGGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS GCA 90 bp | ACCAAATGTCCAAATCCCTGGACAGGCAGACAAGCTCCTCGGTACTaGAGATTCACCACAGCAACAGACACTGCCTTGATGGTACTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TKCPNPWTGRQAPRY*RFTTATDTALMVLR Trigger: CCTGAGTACCATCAAGGCAGTGTCTGTTGCTGTGGTGAATCTGCAGTACCGAGGAGCTTGTCTGCCTGTCCAGGGATTTGGACATTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS TCA 72 bp | CGGAGTGACCACTGGCTCCATCGCTCAGCCCGGGCCTaGCGAATTAGTGAGGAATCCGGCTGGGGACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSDHWLHRSARA*RISEESGWGLC Trigger: ACAGAGTCCCCAGCCGGATTCCTCACTAATTCGTCAGGCCCGGGCTGAGCGATGGAGCCAGTGGTCACTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS CCA 72 bp | CCAGCGCCCTTCTGGCTGAAGGCTGAGCCCACAGACTaGCTGCCCACTGAGGACAGTGACCCCTTTACTTGC | + |
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Preference number: 6 (lower is better) Translates to: PAPFWLKAEPTD*LPTEDSDPFTC Trigger: GCAAGTAAAGGGGTCACTGTCCTCAGTGGGCAGCCAGTCTGTGGGCTCAGCCTTCAGCCAGAAGGGCGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS CCA 72 bp | CCTAACTGTGTGGCGGCTGCCTCCTGGGCTTGTTGCTaGAACAGCTCTGGAGACAGTTGGTGGCCCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PNCVAAASWACC*NSSGDSWWPAA Trigger: AGCTGCGGGCCACCAACTGTCTCCAGAGCTGTTCCAGCAACAAGCCCAGGAGGCAGCCGCCACACAGTTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS GCA 72 bp | GCCACCTCAGGTCCAAGGCGGCGCTGGGCAAAACTGTaGACAGTTTCATCAGGCTCTTTGCCCCTGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ATSGPRRRWAKL*TVSSGSLPLGF Trigger: GAAGCCCAGGGGCAAAGAGCCTGATGAAACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACCTGAGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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| CDS GCA 72 bp | AGTCCTAACTGTGTGGCGGCTGCCTCCTGGGCTTGTTaGTGGAACAGCTCTGGAGACAGTTGGTGGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SPNCVAAASWAC*WNSSGDSWWPA Trigger: TGCGGGCCACCAACTGTCTCCAGAGCTGTTCCAGCAACAAGCCCAGGAGGCAGCCGCCACACAGTTAGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS CAA 72 bp | GCCCAGCAGCAGCCCCAGCAATATGGACCGGTGGGTTaGTTCAGCTTGGAAGAGACTGGGAAAGCAGGACCG | + |
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Preference number: 6 (lower is better) Translates to: AQQQPQQYGPVG*FSLEETGKAGP Trigger: CGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAACAAACCCACCGGTCCATATTGCTGGGGCTGCTGCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS TCA 72 bp | CCGCCTACATACAGGAACCTGTTCTGGGCAGCTGGGTaGTCCCCTCGGACAGGCAAGACTTCAGACTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PPTYRNLFWAAG*SPRTGKTSDSK Trigger: CTTGGAGTCTGAAGTCTTGCCTGTCCGAGGGGATCACCCAGCTGCCCAGAACAGGTTCCTGTATGTAGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS CCA 72 bp | GGTACCGCCTACATACAGGAACCTGTTCTGGGCAGCTaGGTGATCCCCTCGGACAGGCAAGACTTCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: GTAYIQEPVLGS*VIPSDRQDFRL Trigger: GAGTCTGAAGTCTTGCCTGTCCGAGGGGATCACCCAGCTGCCCAGAACAGGTTCCTGTATGTAGGCGGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS CAA 72 bp | CTGGGAAAGCAGGACCGGATGCTGAGCTCCCGGCTGTaGCCAGCAAATACTCCTCGGCAAAGACTGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LGKQDRMLSSRL*PANTPRQRLSM Trigger: CATGGACAGTCTTTGCCGAGGAGTATTTGCTGGCAACAGCCGGGAGCTCAGCATCCGGTCCTGCTTTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS TCA 72 bp | CAACTGCTGCCTGGCGCCCACTCTCTATACAGTCATTaGCAGCAACCCCCTCATAGGAGGCTCCAGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: QLLPGAHSLYSH*QQPPHRRLQPK Trigger: CTTTGGCTGGAGCCTCCTATGAGGGGGTTGCTGTCAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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| CDS CAA 72 bp | GATCCTCGGATTGAGCGGATCCATCCTCCCAAACGCTaGCTGCCCTCCACTAAGATCACCTTAGGAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: DPRIERIHPPKR*LPSTKITLGGL Trigger: CAGTCCTCCTAAGGTGATCTTAGTGGAGGGCAGCAAGCGTTTGGGAGGATGGATCCGCTCAATCCGAGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS CAA 90 bp | TCCCTCGAGGTCCAAGTTCAAAGATCGCACCATCTGATCCTCGGATaGAGCGGATCCATCCTCCCAAACGCTTGCTGCCCTCCACTAAGA | + |
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Preference number: 6 (lower is better) Translates to: SLEVQVQRSHHLILG*SGSILPNACCPPLR Trigger: TCTTAGTGGAGGGCAGCAAGCGTTTGGGAGGATGGATCCGCTCAATCCGAGGATCAGATGGTGCGATCTTTGAACTTGGACCTCGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS TCA 72 bp | CGAGTCGTACACAATTCCCAGGACAGTCGGGTCTTCTaGCGATGGCACCAAATGTCCAAATCCCTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: RVVHNSQDSRVF*RWHQMSKSLDR Trigger: CCTGTCCAGGGATTTGGACATTTGGTGCCATCGTCAGAAGACCCGACTGTCCTGGGAATTGTGTACGACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS GCA 72 bp | TCAGCTGTTAGATTCTGTGCCCAGGACAGCAACTGCTaGCTGGCGCCCACTCTCTATACAGTCATTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SAVRFCAQDSNC*LAPTLYTVIDS Trigger: GCTGTCAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTTGCTGTCCTGGGCACAGAATCTAACAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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| CDS CCA 72 bp | ATGGCTAAAGATGCCACCTCAGGTCCAAGGCGGCGCTaGGCAAAACTGTGCACAGTTTCATCAGGCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MAKDATSGPRRR*AKLCTVSSGSL Trigger: CAAAGAGCCTGATGAAACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACCTGAGGTGGCATCTTTAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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| CDS CCA 72 bp | CTGTTAGATTCTGTGCCCAGGACAGCAACTGCTGCCTaGCGCCCACTCTCTATACAGTCATTGACAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: LLDSVPRTATAA*RPLSIQSLTAT Trigger: GGTTGCTGTCAATGACTGTATAGAGAGTGGGCGCCAGGCAGCAGTTGCTGTCCTGGGCACAGAATCTAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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| CDS CAA 72 bp | ATTCGAGCTAGAGGTGCAGCCTCGGCAGGGAGCAGCTaGCTGAGCTCTGAAGCTGGAATGGCACTTATAATG | + |
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Preference number: 6 (lower is better) Translates to: IRARGAASAGSS*LSSEAGMALIM Trigger: CATTATAAGTGCCATTCCAGCTTCAGAGCTCAGCAAGCTGCTCCCTGCCGAGGCTGCACCTCTAGCTCGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS GCA 72 bp | GCCAAAGTCAGGGGCAACCTCTGGGCCGTCAGGAATTaGATAGCTGAGTCTAGTTTTTGCCAGTGGCCTATT | + |
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Preference number: 6 (lower is better) Translates to: AKVRGNLWAVRN*IAESSFCQWPI Trigger: AATAGGCCACTGGCAAAAACTAGACTCAGCTATGCAATTCCTGACGGCCCAGAGGTTGCCCCTGACTTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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| CDS CCA 72 bp | TTGCTGAGCTCTGAAGCTGGAATGGCACTTATAATGTaGTCAGCCTCCAGACTGCTGTCCCCTAGAGACACC | + |
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Preference number: 6 (lower is better) Translates to: LLSSEAGMALIM*SASRLLSPRDT Trigger: GGTGTCTCTAGGGGACAGCAGTCTGGAGGCTGACCACATTATAAGTGCCATTCCAGCTTCAGAGCTCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073120.11 ENSMUST00000192956.3 |
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| CDS TCA 72 bp | GCTGAGTCTAGTTTTTGCCAGTGGCCTATTGTATACTaGGGGATACAGTTCTTGTGTAGATGGACCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: AESSFCQWPIVY*GIQFLCRWTRQ Trigger: CTGCCTGGTCCATCTACACAAGAACTGTATCCCTCAGTATACAATAGGCCACTGGCAAAAACTAGACTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073120.11 |
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