Pregenerated sensors for PPME1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030718Ensembl transcript IDs: ENSMUST00000032963.10, ENSMUST00000207634.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTCAGCCCAGGGCAGGTGCCCAGACATGTGGGAGTGGGACAGTaGGCTCACCCAGATGGGAAGCCATGTGCTTGGACTGGCTGGACC | + |
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Preference number: 1 (lower is better) Translates to: GLSPGQVPRHVGVGQ*AHPDGKPCAWTGWT Trigger: GGTCCAGCCAGTCCAAGCACATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCACATGTCTGGGCACCTGCCCTGGGCTGAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 90 bp | TGGGGTACATTGCCATATGCCAGGAACAGGGCCAGGGAGCAGCGCTaGAGGCTTCATCCTAGGCAAGGCAGGGAGCACAGGAAGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: WGTLPYARNRAREQR*RLHPRQGREHRKER Trigger: CCTCTCCTTCCTGTGCTCCCTGCCTTGCCTAGGATGAAGCCTCCAGCGCTGCTCCCTGGCCCTGTTCCTGGCATATGGCAATGTACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 90 bp | GCAGGTGCCCAGACATGTGGGAGTGGGACAGTGGGCTCACCCAGATaGGAAGCCATGTGCTTGGACTGGCTGGACCTGACTTACAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: AGAQTCGSGTVGSPR*EAMCLDWLDLTYRL Trigger: CAACCTGTAAGTCAGGTCCAGCCAGTCCAAGCACATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCACATGTCTGGGCACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR GCA 90 bp | CAAGAACATCCTCAAGGAAGGGAGATCCCTGAGCCTGGGGTACATTaGCATATGCCAGGAACAGGGCCAGGGAGCAGCGCTGGAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: QEHPQGREIPEPGVH*HMPGTGPGSSAGGF Trigger: GAAGCCTCCAGCGCTGCTCCCTGGCCCTGTTCCTGGCATATGGCAATGTACCCCAGGCTCAGGGATCTCCCTTCCTTGAGGATGTTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 90 bp | TGGGCTCACCCAGATGGGAAGCCATGTGCTTGGACTGGCTGGACCTaGCTTACAGGTTGGTTTCTTGGGATACTTGCTATCCACTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: WAHPDGKPCAWTGWT*LTGWFLGILAIHSL Trigger: GAGGGAGTGGATAGCAAGTATCCCAAGAAACCAACCTGTAAGTCAGGTCCAGCCAGTCCAAGCACATGGCTTCCCATCTGGGTGAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR GCA 90 bp | CAATGCTTTCAACAGTACACAGGAAAGGGTTTGGACATCTGGGGATaGCCTCTACAAGAGCCGGTGTCACATGGCTGGGCGGGATGGAGA | + |
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Preference number: 1 (lower is better) Translates to: QCFQQYTGKGLDIWG*PLQEPVSHGWAGWR Trigger: TCTCCATCCCGCCCAGCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR GCA 90 bp | CCCAGACTGCACGGGCCACTGTTGGACAAGGGCCCTGAAGAACAATaGTTTCAACAGTACACAGGAAAGGGTTTGGACATCTGGGGATGC | + |
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Preference number: 1 (lower is better) Translates to: PRLHGPLLDKGPEEQ*FQQYTGKGLDIWGC Trigger: GCATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 90 bp | GAAGGAGAGGAAGAGCTGTGGACCCCAGACTGCACGGGCCACTGTTaGACAAGGGCCCTGAAGAACAATGCTTTCAACAGTACACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: EGEEELWTPDCTGHC*TRALKNNAFNSTQE Trigger: TTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCTGGGGTCCACAGCTCTTCCTCTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 90 bp | AGCTGTGGACCCCAGACTGCACGGGCCACTGTTGGACAAGGGCCCTaGAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTTGGACAT | + |
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Preference number: 1 (lower is better) Translates to: SCGPQTARATVGQGP*RTMLSTVHRKGFGH Trigger: ATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCTGGGGTCCACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 90 bp | GAAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTTGGACATCTaGGGATGCCCTCTACAAGAGCCGGTGTCACATGGCTGGGCGGGA | + |
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Preference number: 1 (lower is better) Translates to: EEQCFQQYTGKGLDI*GCPLQEPVSHGWAG Trigger: TCCCGCCCAGCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 90 bp | AGGGCCCTGAAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTTaGACATCTGGGGATGCCCTCTACAAGAGCCGGTGTCACATGGCT | + |
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Preference number: 1 (lower is better) Translates to: RALKNNAFNSTQERV*TSGDALYKSRCHMA Trigger: AGCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 90 bp | CGCTGCGACAGCTGGATGAGGGCAAAGACTGGGGATGCTAGTCCATaGTGTTTCTACATTAGTGACATGGAAACCACAAGTGGATCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RCDSWMRAKTGDASP*CFYISDMETTSGSR Trigger: TCTTGATCCACTTGTGGTTTCCATGTCACTAATGTAGAAACATCATGGACTAGCATCCCCAGTCTTTGCCCTCATCCAGCTGTCGCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 90 bp | GGGACAGTTAAGACTGGGATAAAGGTACCTGACTGGTGTTTTATTTaGAAGGGAAAAATAAGGGCCAGTGTGTGCATTGCCCATCCCATG | + |
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Preference number: 1 (lower is better) Translates to: GTVKTGIKVPDWCFI*KGKIRASVCIAHPM Trigger: CATGGGATGGGCAATGCACACACTGGCCCTTATTTTTCCCTTTCAAATAAAACACCAGTCAGGTACCTTTATCCCAGTCTTAACTGTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 90 bp | CAAAGACTGGGGATGCTAGTCCATGATGTTTCTACATTAGTGACATaGAAACCACAAGTGGATCAAGAAGCTGTGGGTCTAGAAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: QRLGMLVHDVSTLVT*KPQVDQEAVGLEEA Trigger: TGCCTCTTCTAGACCCACAGCTTCTTGATCCACTTGTGGTTTCCATGTCACTAATGTAGAAACATCATGGACTAGCATCCCCAGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTGTGGGTCTAGAAGAGGCAAGCGGGCACTTGGCACACCTCCAGGAACCCATGGCTGGGCGGGATaGAGAGGAGGAGACAGCGGC | + |
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Preference number: 2 (lower is better) Translates to: RSCGSRRGKRALGTPPGTHGWAG*RGGDSG Trigger: GCCGCTGTCTCCTCCTCTCCATCCCGCCCAGCCATG...GGTTCCTGGAGGTGTGCCAAGTGCCCGCTTGCCTCTTCTAGACCCACAGCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCCCAGTGCTGCGCTGCGACAGCTGGATGAGGGCAAAGACTGGGGATGCTGGGTACATTGCCATATaGCAGGAACAGGGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: EAPVLRCDSWMRAKTGDAGYIAI*QEQGQG Trigger: TCCCTGGCCCTGTTCCTGGCATATGGCAATGTACCC...AGCATCCCCAGTCTTTGCCCTCATCCAGCTGTCGCAGCGCAGCACTGGGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | GGATCAAGAAGCTGTGGGTCTAGAAGAGGCAAGCGGGCACTTGGCACACCTCCAGTGGGAGTGGGACAGTaGGCTCACCCAGATGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GSRSCGSRRGKRALGTPPVGVGQ*AHPDGK Trigger: CTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCAC...TGGAGGTGTGCCAAGTGCCCGCTTGCCTCTTCTAGACCCACAGCTTCTTGATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGTACATTGCCATATGCCAGGAACAGGGCCAGGGAGCAGCGCTGGAGGCCGTCACAGTGGCCTCTaGTGCGATGTATTTACAACA | + |
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Preference number: 2 (lower is better) Translates to: PGVHCHMPGTGPGSSAGGRHSGL*CDVFTT Trigger: TGTTGTAAATACATCGCACCAGAGGCCACTGTGACG...GCCTCCAGCGCTGCTCCCTGGCCCTGTTCCTGGCATATGGCAATGTACCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGCCAGACATGTGGGAGTaGGACAGTGGGCTCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: NKVGPRLWTVQQDRGSCWPDMWE*DSGLTQ Trigger: CTGGGTGAGCCCACTGTCCCACTCCCACATGTCTGG...CCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTTCCAGATTTGGGACAAGAGCCGGTGTCACATaGCTGGGCGGGATGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: IHSLSLNPAYSGPSRFGTRAGVT*LGGMER Trigger: CCTCTCCATCCCGCCCAGCCATGTGACACCGGCTCT...TGTCCCAAATCTGGAAGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CAA 90 bp | GGAAGGAGAGGAAGAGCTGTGGACCCCAGACTGCACGGGCCACTGTaGGACAAGGGCCCTGAAGAACAATGCTTTCAACAGTACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GRRGRAVDPRLHGPL*DKGPEEQCFQQYTG Trigger: TCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCTGGGGTCCACAGCTCTTCCTCTCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGTCTAGAAGAGGCAAGCGGGCACTTGGCACACCTCCAGGAACCAACTATTCCACTCCCTCTCCCTaGATCCTGCTTACTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: CGSRRGKRALGTPPGTNYSTPSP*ILLTLD Trigger: GTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGA...ATAGTTGGTTCCTGGAGGTGTGCCAAGTGCCCGCTTGCCTCTTCTAGACCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGCATTGCCCATCCCATGAGGTAGGGCAGGACCATGCCAAGAACATCCTCACAGCGGCGTCACAGTaGCCTCTGGTGCGATGTATT | + |
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Preference number: 2 (lower is better) Translates to: CVHCPSHEVGQDHAKNILTAASQ*PLVRCI Trigger: AATACATCGCACCAGAGGCCACTGTGACGCCGCTGT...GAGGATGTTCTTGGCATGGTCCTGCCCTACCTCATGGGATGGGCAATGCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGGCCATGTGCTTGGACTaGCTGGACCTGACTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: KKQSRSQTLDRAAGQRKLAMCLD*LDLTYR Trigger: CCTGTAAGTCAGGTCCAGCCAGTCCAAGCACATGGC...CAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCAAGGAAGGGAGATCCCTGAGCCTGGGGTACATTGCCATATGCCAGGAAACACAGGAAAGGGTTTaGACATCTGGGGATGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: ILKEGRSLSLGYIAICQETQERV*TSGDAL Trigger: GAGGGCATCCCCAGATGTCCAAACCCTTTCCTGTGT...TTCCTGGCATATGGCAATGTACCCCAGGCTCAGGGATCTCCCTTCCTTGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTCTAGAAGAGGCAAGCGGGCACTTGGCACACCTCCAGGAACCAACTATACAGGATTTAGCCTGTaGCTTTGTGCATGGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: CGSRRGKRALGTPPGTNYTGFSL*LCAWAV Trigger: CACAGCCCATGCACAAAGCCACAGGCTAAATCCTGT...ATAGTTGGTTCCTGGAGGTGTGCCAAGTGCCCGCTTGCCTCTTCTAGACCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CAA 90 bp | AAGGGCCCTGAAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTaGGACATCTGGGGATGCCCTCTACAAGAGCCGGTGTCACATGGC | + |
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Preference number: 2 (lower is better) Translates to: KGPEEQCFQQYTGKG*DIWGCPLQEPVSHG Trigger: GCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGTGTTTAACCTGGGTTGCTCTGTGGCAGATTAGGGCTCATGCGGCCCTTGGCCCTGAAGAACAATaGTTTCAACAGTACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GLCLTWVALWQIRAHAALGPEEQ*FQQYTG Trigger: TCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCC...AAGGGCCGCATGAGCCCTAATCTGCCACAGAGCAACCCAGGTTAAACACAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CAA 90 bp | CAAGTGGATCAAGAAGCTGTGGGTCTAGAAGAGGCAAGCGGGCACTaGGCACACCTCCAGGAACCAACTATGAAAATGGTTAAATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: QVDQEAVGLEEASGH*AHLQEPTMKMVKFS Trigger: ACTGAATTTAACCATTTTCATAGTTGGTTCCTGGAGGTGTGCCAAGTGCCCGCTTGCCTCTTCTAGACCCACAGCTTCTTGATCCACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 72 bp | GCCTCAGCCCAGGGCAGGTGCCCAGACATGTGGGAGTaGGACAGTGGGCTCACCCAGATGGGAAGCCATGTG | + |
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Preference number: 3 (lower is better) Translates to: ASAQGRCPDMWE*DSGLTQMGSHV Trigger: CACATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCACATGTCTGGGCACCTGCCCTGGGCTGAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 72 bp | CATCTGGGGATGCCCTCTACAAGAGCCGGTGTCACATaGCTGGGCGGGATGGAGAGGAGGAGACAGCGGCGT | + |
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Preference number: 3 (lower is better) Translates to: HLGMPSTRAGVT*LGGMERRRQRR Trigger: ACGCCGCTGTCTCCTCCTCTCCATCCCGCCCAGCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 72 bp | CCAGGGCAGGTGCCCAGACATGTGGGAGTGGGACAGTaGGCTCACCCAGATGGGAAGCCATGTGCTTGGACT | + |
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Preference number: 3 (lower is better) Translates to: PGQVPRHVGVGQ*AHPDGKPCAWT Trigger: AGTCCAAGCACATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCACATGTCTGGGCACCTGCCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR GCA 72 bp | GCACAGGAAGGAGAGGAAGAGCTGTGGACCCCAGACTaGACGGGCCACTGTTGGACAAGGGCCCTGAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: AQEGEEELWTPD*TGHCWTRALKN Trigger: GTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCTGGGGTCCACAGCTCTTCCTCTCCTTCCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 72 bp | CAGACATGTGGGAGTGGGACAGTGGGCTCACCCAGATaGGAAGCCATGTGCTTGGACTGGCTGGACCTGACT | + |
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Preference number: 3 (lower is better) Translates to: QTCGSGTVGSPR*EAMCLDWLDLT Trigger: AGTCAGGTCCAGCCAGTCCAAGCACATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCACATGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR GCA 72 bp | CAACAGTACACAGGAAAGGGTTTGGACATCTGGGGATaGCCTCTACAAGAGCCGGTGTCACATGGCTGGGCG | + |
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Preference number: 3 (lower is better) Translates to: QQYTGKGLDIWG*PLQEPVSHGWA Trigger: CGCCCAGCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR GCA 72 bp | AGTGGGACAGTGGGCTCACCCAGATGGGAAGCCATGTaGTTGGACTGGCTGGACCTGACTTACAGGTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: SGTVGSPRWEAM*LDWLDLTYRLV Trigger: AACCAACCTGTAAGTCAGGTCCAGCCAGTCCAAGCACATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 72 bp | CCCCAGACTGCACGGGCCACTGTTGGACAAGGGCCCTaGAGAACAATGCTTTCAACAGTACACAGGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: PQTARATVGQGP*RTMLSTVHRKG Trigger: CCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 72 bp | GAAGAGCTGTGGACCCCAGACTGCACGGGCCACTGTTaGACAAGGGCCCTGAAGAACAATGCTTTCAACAGT | + |
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Preference number: 3 (lower is better) Translates to: EELWTPDCTGHC*TRALKNNAFNS Trigger: ACTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCTGGGGTCCACAGCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 72 bp | ACCATGCCAAGAACATCCTCAAGGAAGGGAGATCCCTaGGCCTGGGGTACATTGCCATATGCCAGGAACAGG | + |
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Preference number: 3 (lower is better) Translates to: TMPRTSSRKGDP*AWGTLPYARNR Trigger: CCTGTTCCTGGCATATGGCAATGTACCCCAGGCTCAGGGATCTCCCTTCCTTGAGGATGTTCTTGGCATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 72 bp | CCAGATGGGAAGCCATGTGCTTGGACTGGCTGGACCTaGCTTACAGGTTGGTTTCTTGGGATACTTGCTATC | + |
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Preference number: 3 (lower is better) Translates to: PDGKPCAWTGWT*LTGWFLGILAI Trigger: GATAGCAAGTATCCCAAGAAACCAACCTGTAAGTCAGGTCCAGCCAGTCCAAGCACATGGCTTCCCATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR GCA 72 bp | CACGGGCCACTGTTGGACAAGGGCCCTGAAGAACAATaGTTTCAACAGTACACAGGAAAGGGTTTGGACATC | + |
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Preference number: 3 (lower is better) Translates to: HGPLLDKGPEEQ*FQQYTGKGLDI Trigger: GATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 72 bp | GGTTTCTTGGGATACTTGCTATCCACTCCCTCTCCCTaGATCCTGCTTACTCTGGACCTTCCAGATTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GFLGYLLSTPSP*ILLTLDLPDLG Trigger: TCCCAAATCTGGAAGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGATAGCAAGTATCCCAAGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR GCA 72 bp | TATTTGAAAGGGAAAAATAAGGGCCAGTGTGTGCATTaGCCATCCCATGAGGTAGGGCAGGACCATGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: YLKGKNKGQCVH*PSHEVGQDHAK Trigger: CTTGGCATGGTCCTGCCCTACCTCATGGGATGGGCAATGCACACACTGGCCCTTATTTTTCCCTTTCAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 72 bp | AGCTGGATGAGGGCAAAGACTGGGGATGCTAGTCCATaGTGTTTCTACATTAGTGACATGGAAACCACAAGT | + |
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Preference number: 3 (lower is better) Translates to: SWMRAKTGDASP*CFYISDMETTS Trigger: ACTTGTGGTTTCCATGTCACTAATGTAGAAACATCATGGACTAGCATCCCCAGTCTTTGCCCTCATCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR-3UTR CAA 90 bp | AGACTGGGGATGCTAGTCCATGATGTTTCTACATTAGTGACATGGAAACCACAAGACCTGACTTACAGGTaGGTTTCTTGGGATACTTGC | + |
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Preference number: 3 (lower is better) Translates to: RLGMLVHDVSTLVTWKPQDLTYR*VSWDTC Trigger: GCAAGTATCCCAAGAAACCAACCTGTAAGTCAGGTC...TTGTGGTTTCCATGTCACTAATGTAGAAACATCATGGACTAGCATCCCCAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 72 bp | TCAGTCATTAAAAACAATTCCACAGGATTTAGCCTGTaGCTTTGTGCATGGGCTGTGTTTAACCTGGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: SVIKNNSTGFSL*LCAWAVFNLGC Trigger: GCAACCCAGGTTAAACACAGCCCATGCACAAAGCCACAGGCTAAATCCTGTGGAATTGTTTTTAATGACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CCA 72 bp | GGGATGCTAGTCCATGATGTTTCTACATTAGTGACATaGAAACCACAAGTGGATCAAGAAGCTGTGGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: GMLVHDVSTLVT*KPQVDQEAVGL Trigger: TAGACCCACAGCTTCTTGATCCACTTGTGGTTTCCATGTCACTAATGTAGAAACATCATGGACTAGCATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR TCA 72 bp | AAGACTGGGATAAAGGTACCTGACTGGTGTTTTATTTaGAAGGGAAAAATAAGGGCCAGTGTGTGCATTGCC | + |
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Preference number: 3 (lower is better) Translates to: KTGIKVPDWCFI*KGKIRASVCIA Trigger: GGCAATGCACACACTGGCCCTTATTTTTCCCTTTCAAATAAAACACCAGTCAGGTACCTTTATCCCAGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR TCA 90 bp | AGCCGGTGTCACATGGCTGGGCGGGATGGAGAGGAGGAGACAGCGGCGTCACAGATCTTGGCTCCGCTCTaGCTGCCCCCGCTGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRCHMAGRDGEEETAASQILAPL*LPPLPG Trigger: ACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGAT...CTGTGACGCCGCTGTCTCCTCCTCTCCATCCCGCCCAGCCATGTGACACCGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | GTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAAATCTGACTGCCCCCGCTaGCGGGTAGAGGAGGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGPRLWTVQQDRGSCWVKSDCPR*RVEEGE Trigger: CTCGCCCTCCTCTACCCGGCAGCGGGGGCAGTCAGA...TTTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | GGTGCCCAGACATGTGGGAGTGGGACAGTGGGCTCACCCAGATGGGAAGCCATGTGCGGCTGTGTGCACTaGAATGGCGCCACCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAQTCGSGTVGSPRWEAMCGCVH*NGATHA Trigger: AGCATGGGTGGCGCCATTGCAGTGCACACAGCCGCA...CATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCACATGTCTGGGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGGAGGCCCCAGTGCTGCGCTGCGACAGCTGGATGAGGGCAAAGACTGGACTGGAATCCTCCAATaGGCTCTGCAAACCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGGPSAALRQLDEGKDWTGILQ*ALQTCA Trigger: GGCACAGGTTTGCAGAGCCCATTGGAGGATTCCAGT...CCAGTCTTTGCCCTCATCCAGCTGTCGCAGCGCAGCACTGGGGCCTCCCCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | AGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAAGCCCCAGTGCTGCGCTaGGACAGCTGGATGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSQTLDRAAGQRKLLGEAPVLR*DSWMRA Trigger: TGCCCTCATCCAGCTGTCGCAGCGCAGCACTGGGGC...TTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207634.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCCCAGACATGTGGGAGTGGGACAGTGGGCTCACCCAGATGGGAAGCCATGAAGGCCCAAGAGGCTTaGTACCAGGTTAGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAQTCGSGTVGSPRWEAMKAQEA*YQVSCG Trigger: GCCGCAGCTAACCTGGTACCAAGCCTCTTGGGCCTT...CATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCACATGTCTGGGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | TGGACATCTGGGGATGCCCTCTACAAGAGCCGGTGTCACATGGCTGGGCGGGATTGCTGCCGTGAACACTaGCCAGGAAAGGGCGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: WTSGDALYKSRCHMAGRDCCREH*PGKGGM Trigger: CATTCCGCCCTTTCCTGGGCAGTGTTCACGGCAGCA...ATCCCGCCCAGCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR TCA 90 bp | GTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAAAGCTGCGACAGCTGGATaGGGGCAAAGACTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VGPRLWTVQQDRGSCWVKAATAG*GQRLGM Trigger: CATCCCCAGTCTTTGCCCTCATCCAGCTGTCGCAGC...TTTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207634.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTTGCGGCTGTGTGCACTaGAATGGCGCCACCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSRSQTLDRAAGQRKLLGCGCVH*NGATHA Trigger: AGCATGGGTGGCGCCATTGCAGTGCACACAGCCGCA...ACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTCAAGGAAGGGAGATCCCTGAGCCTGGGGTACATTGCCATATGCCAGGAAGGCCCATCCGCATCTTaGCTCCGCTCTGACTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILKEGRSLSLGYIAICQEGPSAS*LRSDCP Trigger: GGGGCAGTCAGAGCGGAGCCAAGATGCGGATGGGCC...TTCCTGGCATATGGCAATGTACCCCAGGCTCAGGGATCTCCCTTCCTTGAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | GTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAAACTGTGTGCACTGCAATaGCGCCACCCATGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGPRLWTVQQDRGSCWVKLCALQ*RHPCCA Trigger: GGCACAGCATGGGTGGCGCCATTGCAGTGCACACAG...TTTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGGAGGCCCCAGTGCTGCGCTGCGACAGCTGGATGAGGGCAAAGACTGGTGCCATTGTTTCTGCTaGCAGGTCTTCAGAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGGGPSAALRQLDEGKDWCHCFC*QVFRIL Trigger: AAGAATTCTGAAGACCTGTCAGCAGAAACAATGGCA...CCAGTCTTTGCCCTCATCCAGCTGTCGCAGCGCAGCACTGGGGCCTCCCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | AGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAAGCGCCACCCATGCTGTaGCCAATCAGCATGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSQTLDRAAGQRKLLGEAPPML*PISMTG Trigger: TCCAGTCATGCTGATTGGGCACAGCATGGGTGGCGC...TTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGCGCTGGAGGCTTCATCCTAGGCAAGGCAGGGAGCACAGGAAGGAGAGGACCCAATCAGCATGACTaGAGGAGGGAGGTCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SSAGGFILGKAGSTGRRGPNQHD*RREVSI Trigger: TATGGAGACCTCCCTCCTCCAGTCATGCTGATTGGG...TCCTCTCCTTCCTGTGCTCCCTGCCTTGCCTAGGATGAAGCCTCCAGCGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | AGCCGGTGTCACATGGCTGGGCGGGATGGAGAGGAGGAGACAGCGGCGTCACAGCCTGCATCTGGCCTATaGTCAGATCTTTATCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SRCHMAGRDGEEETAASQPASGL*SDLYPI Trigger: GATTGGATAAAGATCTGACCATAGGCCAGATGCAGG...CTGTGACGCCGCTGTCTCCTCCTCTCCATCCCGCCCAGCCATGTGACACCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR TCA 90 bp | TGTGTGCATTGCCCATCCCATGAGGTAGGGCAGGACCATGCCAAGAACATCCTCTGTGCCCAATCAGCATaGCTGGAGGAGGGAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVHCPSHEVGQDHAKNILCAQSA*LEEGGL Trigger: GAGACCTCCCTCCTCCAGTCATGCTGATTGGGCACA...GAGGATGTTCTTGGCATGGTCCTGCCCTACCTCATGGGATGGGCAATGCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGGGTACATTGCCATATGCCAGGAACAGGGCCAGGGAGCAGCGCTGGAGGCTGGCTTCCACCACATTaGCAACATCTTTTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PGVHCHMPGTGPGSSAGGWLPPH*QHLLPL Trigger: CAATGGCAAAAGATGTTGGCAATGTGGTGGAAGCCA...GCCTCCAGCGCTGCTCCCTGGCCCTGTTCCTGGCATATGGCAATGTACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | GGTGCCCAGACATGTGGGAGTGGGACAGTGGGCTCACCCAGATGGGAAGCCATGCAATCTGTCAACACCTaGCAAGAGCAGCAGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAQTCGSGTVGSPRWEAMQSVNT*QEQQFR Trigger: CCTAAACTGCTGCTCTTGGCAGGTGTTGACAGATTG...CATGGCTTCCCATCTGGGTGAGCCCACTGTCCCACTCCCACATGTCTGGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGGCTCTGCAAACCTGTaGCGGATCAGGAAAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSRSQTLDRAAGQRKLLGGSANL*RIRKVA Trigger: TGCCACTTTCCTGATCCGGCACAGGTTTGCAGAGCC...ACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | TGGACATCTGGGGATGCCCTCTACAAGAGCCGGTGTCACATGGCTGGGCGGGATGGAGGTCTCCATACATaGCTTCCACCACATTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WTSGDALYKSRCHMAGRDGGLHT*LPPHCQ Trigger: TTGGCAATGTGGTGGAAGCCATGTATGGAGACCTCC...ATCCCGCCCAGCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | AAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGCTGTGTGCACTGCAATaGCGCCACCCATGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQSRSQTLDRAAGQRKLLLCALQ*RHPCCA Trigger: GGCACAGCATGGGTGGCGCCATTGCAGTGCACACAG...CAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| 3UTR CAA 72 bp | GGAAGAGCTGTGGACCCCAGACTGCACGGGCCACTGTaGGACAAGGGCCCTGAAGAACAATGCTTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRAVDPRLHGPL*DKGPEEQCFQQ Trigger: CTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCTGGGGTCCACAGCTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGAAGGCCCAAGAGGCTTaGTACCAGGTTAGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQSRSQTLDRAAGQRKLLKAQEA*YQVSCG Trigger: GCCGCAGCTAACCTGGTACCAAGCCTCTTGGGCCTT...CAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS-3UTR CCA 90 bp | TATGCCAGGAACAGGGCCAGGGAGCAGCGCTGGAGGCTTCATCCTAGGCAAGGCAACTTCCCCTGCATCTaGCCTATGGTCAGATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YARNRAREQRWRLHPRQGNFPCI*PMVRSL Trigger: TAAAGATCTGACCATAGGCCAGATGCAGGGGAAGTT...GCCTTGCCTAGGATGAAGCCTCCAGCGCTGCTCCCTGGCCCTGTTCCTGGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | AGACTGCACGGGCCACTGTTGGACAAGGGCCCTGAAGAACAATGCTTTCAACAGTCAGGGGCATCCTCATaGACTGCATGGCCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLHGPLLDKGPEEQCFQQSGASS*TAWPHW Trigger: CCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGA...CTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGCCGGATCAGGAAAGTaGCAACAGCTTCAGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: QSRSQTLDRAAGQRKLLGAGSGK*QQLQLP Trigger: AGGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGC...ACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTCTCCAGGTGTATGGGTaGTCCTTCTTGGTTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QSRSQTLDRAAGQRKLLGLQVYG*SFLVSM Trigger: CATGGAAACCAAGAAGGATCACCCATACACCTGGAG...ACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS-3UTR GCA 90 bp | CATTGCCCATCCCATGAGGTAGGGCAGGACCATGCCAAGAACATCCTCAAGGAATCCTCCAATGGGCTCTaGAAACCTGTGCCGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HCPSHEVGQDHAKNILKESSNGL*KPVPDQ Trigger: CTGATCCGGCACAGGTTTGCAGAGCCCATTGGAGGA...TTCCTTGAGGATGTTCTTGGCATGGTCCTGCCCTACCTCATGGGATGGGCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | CAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTTCACACTGTTTGACTTaGCCGACCATGGATACACGG | + |
|
Preference number: 4 (lower is better) Translates to: QSRSQTLDRAAGQRKLLGSHCLT*PTMDTR Trigger: CCGTGTATCCATGGTCGGCCAAGTCAAACAGTGTGA...ACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGACTGCATGGCCACACTaGGGTAAGACCTGCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQSRSQTLDRAAGQRKLLTAWPH*GKTCIW Trigger: CCAGATGCAGGTCTTACCCCAGTGTGGCCATGCAGT...CAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | AAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGTCCTCATGGACTGCATaGCCACACTGGGGTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KQSRSQTLDRAAGQRKLLSSWTA*PHWGKT Trigger: GGTCTTACCCCAGTGTGGCCATGCAGTCCATGAGGA...CAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGGGGATGCTAGTCCATGATGTTTCTACATTAGTGACATGGAAACCACAATGGCTCCGCTCTGACTaGCCCCGCTGCCGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGMLVHDVSTLVTWKPQWLRSD*PRCRVE Trigger: CTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCA...TTGTGGTTTCCATGTCACTAATGTAGAAACATCATGGACTAGCATCCCCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR TCA 90 bp | AGGAAGGAGAGGAAGAGCTGTGGACCCCAGACTGCACGGGCCACTGTTGGACAATTCCACATCTTCCATTaGCTCAAAGTACTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKERKSCGPQTARATVGQFHIFH*LKVLTP Trigger: TGGAGTCAGTACTTTGAGTCAATGGAAGATGTGGAA...TTGTCCAACAGTGGCCCGTGCAGTCTGGGGTCCACAGCTCTTCCTCTCCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | GAAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTAAAGTACTGACTCCATaGGACAGGGGTAAAGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETKSVPDSGPCSRTEEVVKVLTP*DRGKVP Trigger: CGGGACTTTACCCCTGTCCCATGGAGTCAGTACTTT...AACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTTCAAGGTTTCGAATCTaGCCACTCTTCACACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSRSQTLDRAAGQRKLLGSRFRI*PLFTLH Trigger: ATGGAGTGTGAAGAGTGGCCAGATTCGAAACCTTGA...ACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAATCAAGGTTTCGAATCTaGCCACTCTTCACACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRSQTLDRAAGQRKLLGESRFRI*PLFTLH Trigger: ATGGAGTGTGAAGAGTGGCCAGATTCGAAACCTTGA...TTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTCACACTGTTTGACTTaGCCGACCATGGATACACGG | + |
|
Preference number: 4 (lower is better) Translates to: KKQSRSQTLDRAAGQRKLSHCLT*PTMDTR Trigger: CCGTGTATCCATGGTCGGCCAAGTCAAACAGTGTGA...CAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTATGGGTGATCCTTCTTaGTTTCCATGTCGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSRSQTLDRAAGQRKLLGMGDPS*FPCRLP Trigger: AGGAAGACGACATGGAAACCAAGAAGGATCACCCAT...ACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR CCA 90 bp | GAAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTACAGTCACAGAAAGATaGGTTTCAGGAGGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETKSVPDSGPCSRTEEVVTVTER*VSGGCP Trigger: TGGGCAGCCTCCTGAAACCCATCTTTCTGTGACTGT...AACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207634.2 |
||
| CDS-3UTR TCA 90 bp | AGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAATTTCCTCTTGTTAACTaGCTCACTTCCTTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRSQTLDRAAGQRKLLGEFPLVN*LTSFLI Trigger: GATGAGGAAGGAAGTGAGTCAGTTAACAAGAGGAAA...TTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR TCA 90 bp | ATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTTCCAGATTTGGGACACTCCAGGTGTATGGGTaGTCCTTCTTGGTTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IHSLSLNPAYSGPSRFGTLQVYG*SFLVSM Trigger: CATGGAAACCAAGAAGGATCACCCATACACCTGGAG...TGTCCCAAATCTGGAAGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGCTGCATGCTATTAAGTaGATCCATGGCGGTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQSRSQTLDRAAGQRKLLLHAIK*IHGGTF Trigger: GAAGGTACCGCCATGGATGCACTTAATAGCATGCAG...CAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGATACTTGCTATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTATCTGGAACTTCCCCTaGATCTGGCCTATGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGILAIHSLSLNPAYSGPIWNFP*IWPMVR Trigger: TCTGACCATAGGCCAGATGCAGGGGAAGTTCCAGAT...AGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGATAGCAAGTATCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR CCA 90 bp | CGGCGTCACAGTGGCCTCTGGTGCGATGTATTTACAACAGAGCTCAATGTAGAGCCAGGAAACACACACTaGAATCCTCCAATGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRHSGLWCDVFTTELNVEPGNTH*NPPMGS Trigger: AGAGCCCATTGGAGGATTCCAGTGTGTGTTTCCTGG...CTCTACATTGAGCTCTGTTGTAAATACATCGCACCAGAGGCCACTGTGACGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
||
| CDS-3UTR GCA 90 bp | AAGAAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGCTACAACATCAATCATaGAAAGGCCCAAGAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKQSRSQTLDRAAGQRKLLQHQS*KGPRGL Trigger: CAAGCCTCTTGGGCCTTTGCATGATTGATGTTGTAG...CAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
||
| CDS-3UTR GCA 90 bp | ATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTTCCAGATTTGGGACACTGCATGCTATTAAGTaGATCCATGGCGGTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHSLSLNPAYSGPSRFGTLHAIK*IHGGTF Trigger: GAAGGTACCGCCATGGATGCACTTAATAGCATGCAG...TGTCCCAAATCTGGAAGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | AGACTGCACGGGCCACTGTTGGACAAGGGCCCTGAAGAACAATGCTTTCAACAGATGGGTGATCCTTCTTaGTTTCCATGTCGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLHGPLLDKGPEEQCFQQMGDPS*FPCRLP Trigger: AGGAAGACGACATGGAAACCAAGAAGGATCACCCAT...CTGTTGAAAGCATTGTTCTTCAGGGCCCTTGTCCAACAGTGGCCCGTGCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | GGCCCTGAAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTTGGACATCTGGGGTAAGACCTGCATCTaGAACTTCCCCTGCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPEEQCFQQYTGKGLDIWGKTCI*NFPCIW Trigger: CCAGATGCAGGGGAAGTTCCAGATGCAGGTCTTACC...CCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| 3UTR CAA 72 bp | GAAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTaGGACATCTGGGGATGCCCTCTACAAGAGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEQCFQQYTGKG*DIWGCPLQEPV Trigger: CACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | GAAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTAATTCTCCAGGTGTATaGGTGATCCTTCTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETKSVPDSGPCSRTEEVVNSPGV*VILLGF Trigger: GAAACCAAGAAGGATCACCCATACACCTGGAGAATT...AACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS-3UTR GCA 90 bp | CATTGCCCATCCCATGAGGTAGGGCAGGACCATGCCAAGAACATCCTCAAGGAACTCGAAAAGTATCCTTaGCAGTTTCATTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HCPSHEVGQDHAKNILKELEKYP*QFHSPL Trigger: AAGTGGAGAATGAAACTGGCAAGGATACTTTTCGAG...TTCCTTGAGGATGTTCTTGGCATGGTCCTGCCCTACCTCATGGGATGGGCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | GAAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGATTTGGAACCTTCTaGACTTGTAATTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ETKSVPDSGPCSRTEEVVGFGTF*TCNSFT Trigger: TGTGAAGGAATTACAAGTCCAGAAGGTTCCAAATCC...AACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS-3UTR GCA 90 bp | GGCCCTGAAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTTGGACATCTGGCTACAACATCAATCATaGAAAGGCCCAAGAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPEEQCFQQYTGKGLDIWLQHQS*KGPRGL Trigger: CAAGCCTCTTGGGCCTTTGCATGATTGATGTTGTAG...CCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAGGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | AGACTGGGGATGCTAGTCCATGATGTTTCTACATTAGTGACATGGAAACCACAAAAGCAGCAGCAGGACTaGACCCTCAGAACCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGMLVHDVSTLVTWKPQKQQQD*TLRTTL Trigger: AAGAGTGGTTCTGAGGGTCCAGTCCTGCTGCTGCTT...TTGTGGTTTCCATGTCACTAATGTAGAAACATCATGGACTAGCATCCCCAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | CGGCGTCACAGTGGCCTCTGGTGCGATGTATTTACAACAGAGCTCAATGTAGAGGGATTTGGAACCTTCTaGACTTGTAATTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RRHSGLWCDVFTTELNVEGFGTF*TCNSFT Trigger: TGTGAAGGAATTACAAGTCCAGAAGGTTCCAAATCC...CTCTACATTGAGCTCTGTTGTAAATACATCGCACCAGAGGCCACTGTGACGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CCA 90 bp | ACTTGCTATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTTCCAGATTAATTCTCCAGGTGTATaGGTGATCCTTCTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TCYPLPLPESCLLWTFQINSPGV*VILLGF Trigger: GAAACCAAGAAGGATCACCCATACACCTGGAGAATT...AATCTGGAAGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGATAGCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR TCA 90 bp | CTGAAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTTGGACATCTGGGGATCTTCCTCCTCCTCTATaGTTCCTTCCACTATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LKNNAFNSTQERVWTSGDLPPPL*FLPLWI Trigger: AATCCATAGTGGAAGGAATCATAGAGGAGGAGGAAG...ATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR TCA 90 bp | CTGAAGAACAATGCTTTCAACAGTACACAGGAAAGGGTTTGGACATCTGGGGATTTTCCTCTTGTTAACTaGCTCACTTCCTTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LKNNAFNSTQERVWTSGDFPLVN*LTSFLI Trigger: GATGAGGAAGGAAGTGAGTCAGTTAACAAGAGGAAA...ATCCCCAGATGTCCAAACCCTTTCCTGTGTACTGTTGAAAGCATTGTTCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 90 bp | CCCGCTTCCGTCCAGGGCCCATCCGCATCTTGGCTCCGCTCTGACTaGCCCCGCTGCCGGGTAGAGGAGGGCGAGAAGGTAGGCGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PASVQGPSASWLRSD*PRCRVEEGEKVGGR Trigger: TCGGCCGCCTACCTTCTCGCCCTCCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGGATGGGCCCTGGACGGAAGCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 90 bp | GTCCAGGGCCCATCCGCATCTTGGCTCCGCTCTGACTGCCCCCGCTaGCGGGTAGAGGAGGGCGAGAAGGTAGGCGGCCGAGGTGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VQGPSASWLRSDCPR*RVEEGEKVGGRGAC Trigger: GCATGCACCTCGGCCGCCTACCTTCTCGCCCTCCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGGATGGGCCCTGGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS TCA 90 bp | AAGTCCCGCTTCCGTCCAGGGCCCATCCGCATCTTGGCTCCGCTCTaGCTGCCCCCGCTGCCGGGTAGAGGAGGGCGAGAAGGTAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KSRFRPGPIRILAPL*LPPLPGRGGREGRR Trigger: CCGCCTACCTTCTCGCCCTCCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGGATGGGCCCTGGACGGAAGCGGGACTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 90 bp | AAGGCCCAAGAGGCTTGGTACCAGGTTAGCTGCGGCTGTGTGCACTaGAATGGCGCCACCCATGCTGTGCCCAATCAGCATGACTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAQEAWYQVSCGCVH*NGATHAVPNQHDWR Trigger: CCTCCAGTCATGCTGATTGGGCACAGCATGGGTGGCGCCATTGCAGTGCACACAGCCGCAGCTAACCTGGTACCAAGCCTCTTGGGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 90 bp | AGGTTAGCTGCGGCTGTGTGCACTGCAATGGCGCCACCCATGCTGTaGCCAATCAGCATGACTGGAGGAGGGAGGTCTCCATACATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLAAAVCTAMAPPML*PISMTGGGRSPYMA Trigger: AGCCATGTATGGAGACCTCCCTCCTCCAGTCATGCTGATTGGGCACAGCATGGGTGGCGCCATTGCAGTGCACACAGCCGCAGCTAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS TCA 90 bp | CTGTGTGCACTGCAATGGCGCCACCCATGCTGTGCCCAATCAGCATaGCTGGAGGAGGGAGGTCTCCATACATGGCTTCCACCACATTGC | + |
|
Preference number: 5 (lower is better) Translates to: LCALQWRHPCCAQSA*LEEGGLHTWLPPHC Trigger: GCAATGTGGTGGAAGCCATGTATGGAGACCTCCCTCCTCCAGTCATGCTGATTGGGCACAGCATGGGTGGCGCCATTGCAGTGCACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS CCA 90 bp | GTGCACTGCAATGGCGCCACCCATGCTGTGCCCAATCAGCATGACTaGAGGAGGGAGGTCTCCATACATGGCTTCCACCACATTGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VHCNGATHAVPNQHD*RREVSIHGFHHIAN Trigger: GTTGGCAATGTGGTGGAAGCCATGTATGGAGACCTCCCTCCTCCAGTCATGCTGATTGGGCACAGCATGGGTGGCGCCATTGCAGTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS CCA 90 bp | GGCGGTACCTTCTACAACATCAATCATGCAAAGGCCCAAGAGGCTTaGTACCAGGTTAGCTGCGGCTGTGTGCACTGCAATGGCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GGTFYNINHAKAQEA*YQVSCGCVHCNGAT Trigger: GGTGGCGCCATTGCAGTGCACACAGCCGCAGCTAACCTGGTACCAAGCCTCTTGGGCCTTTGCATGATTGATGTTGTAGAAGGTACCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS GCA 90 bp | TCGCAGATCCAGAGCCACAATCCTACACTGTACTCTACTGATGATTaGTGCCGTGAACACTGCCCAGGAAAGGGCGGAATGGCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQIQSHNPTLYSTDD*CREHCPGKGGMASS Trigger: GGAGGAGGCCATTCCGCCCTTTCCTGGGCAGTGTTCACGGCAGCAATCATCAGTAGAGTACAGTGTAGGATTGTGGCTCTGGATCTGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 90 bp | AACATCAATCATGCAAAGGCCCAAGAGGCTTGGTACCAGGTTAGCTaGGGCTGTGTGCACTGCAATGGCGCCACCCATGCTGTGCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: NINHAKAQEAWYQVS*GCVHCNGATHAVPN Trigger: ATTGGGCACAGCATGGGTGGCGCCATTGCAGTGCACACAGCCGCAGCTAACCTGGTACCAAGCCTCTTGGGCCTTTGCATGATTGATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS CCA 90 bp | CCAGGAAAGGGCGGAATGGCCTCCTCCATGAAGCAGCAGCAGGACTaGACCCTCAGAACCACTCTTGTAAACTCGAAAAGTATCCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGKGGMASSMKQQQD*TLRTTLVNSKSILA Trigger: GGCAAGGATACTTTTCGAGTTTACAAGAGTGGTTCTGAGGGTCCAGTCCTGCTGCTGCTTCATGGAGGAGGCCATTCCGCCCTTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | TGGACATCTGGGGATGCCCTCTACAAGAGCCGGTGTCACATGGCTGGGCGGGATCCTTCCACTATGGATTaGGAACCTTCTGGACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WTSGDALYKSRCHMAGRDPSTMD*EPSGLV Trigger: TACAAGTCCAGAAGGTTCCAAATCCATAGTGGAAGG...ATCCCGCCCAGCCATGTGACACCGGCTCTTGTAGAGGGCATCCCCAGATGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | CTTGGGATACTTGCTATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTACAGCTTCAGCTACCTaGTCAGGGGCATCCTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LGILAIHSLSLNPAYSGPTASAT*SGASSW Trigger: CCATGAGGATGCCCCTGACAAGGTAGCTGAAGCTGT...AGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGATAGCAAGTATCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | AGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAACCTTCCACTATGGATTaGGAACCTTCTGGACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRSQTLDRAAGQRKLLGEPSTMD*EPSGLV Trigger: TACAAGTCCAGAAGGTTCCAAATCCATAGTGGAAGG...TTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS-3UTR CAA 90 bp | AACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGATGGCTTCCACCACATaGCCAACATCTTTTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: NKVGPRLWTVQQDRGSCWMASTT*PTSFAI Trigger: AATGGCAAAAGATGTTGGCAATGTGGTGGAAGCCAT...CCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | AGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGGTGAAAGTACTTTTCTGTTTTaGCCAGCTCAATTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSQTLDRAAGQRKLLGESTFLF*PAQFSR Trigger: CCTGGAGAATTGAGCTGGCAAAAACAGAAAAGTACT...TTCACCCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | ATCCTCAAGGAAGGGAGATCCCTGAGCCTGGGGTACATTGCCATATGCCAGGAACTTCCACATCTTCCATaGACTCAAAGTACTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILKEGRSLSLGYIAICQELPHLP*TQSTDS Trigger: GGAGTCAGTACTTTGAGTCAATGGAAGATGTGGAAG...TTCCTGGCATATGGCAATGTACCCCAGGCTCAGGGATCTCCCTTCCTTGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | AACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTGGACTCGAAAAGTATCCTaGCCAGTTTCATTCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: NKVGPRLWTVQQDRGSCWTRKVS*PVSFST Trigger: AGTGGAGAATGAAACTGGCAAGGATACTTTTCGAGT...CCAACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | ACTTGCTATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTTCCAGATTCAGCTAAGAAAGAGATaGGATAAGCCCCGGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TCYPLPLPESCLLWTFQIQLRKR*DKPRNQ Trigger: CTGGTTCCGGGGCTTATCCAATCTCTTTCTTAGCTG...AATCTGGAAGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGATAGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | GCAAGCGGGCACTTGGCACACCTCCAGGAACCAACTATGAAAATGGTTAAATTCTTCACACTGTTTGACTaGGCCGACCATGGATACACG | + |
|
Preference number: 5 (lower is better) Translates to: ASGHLAHLQEPTMKMVKFFTLFD*ADHGYT Trigger: CGTGTATCCATGGTCGGCCAAGTCAAACAGTGTGAA...GAATTTAACCATTTTCATAGTTGGTTCCTGGAGGTGTGCCAAGTGCCCGCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS TCA 90 bp | GAGGGCAAAGACTGGGGATGCAGCTCAATTCTCCAGGTGTATGGGTaGTCCTTCTTGGTTTCCATGTCGTCTTCCTTTTTCCTCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: EGKDWGCSSILQVYG*SFLVSMSSSFFLLL Trigger: TAACAAGAGGAAAAAGGAAGACGACATGGAAACCAAGAAGGATCACCCATACACCTGGAGAATTGAGCTGCATCCCCAGTCTTTGCCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207634.2 |
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| CDS-3UTR CAA 90 bp | ATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTTCCAGATTTGGGACACAACATCTTTTGCCATaGTTTCTGCTGACAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IHSLSLNPAYSGPSRFGTQHLLP*FLLTGL Trigger: AAGACCTGTCAGCAGAAACAATGGCAAAAGATGTTG...TGTCCCAAATCTGGAAGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | GAAACAAAGTCGGTCCCAGACTCTGGACCGTGCAGCAGGACAGAGGAAGTTGTTTCTTCCTTTTTCCTCTaGTTAACTGACTCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ETKSVPDSGPCSRTEEVVSSFFL*LTDSLP Trigger: AGGAAGTGAGTCAGTTAACAAGAGGAAAAAGGAAGA...AACAACTTCCTCTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS TCA 90 bp | GTTTCTGCTGACAGGTCTTCAGAATTCTTGACTTTAGTTTCTCCGTaGCCTCGCAGATCCAGAGCCACAATCCTACACTGTACTCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSADRSSEFLTLVSP*PRRSRATILHCTLL Trigger: CAGTAGAGTACAGTGTAGGATTGTGGCTCTGGATCTGCGAGGTCACGGAGAAACTAAAGTCAAGAATTCTGAAGACCTGTCAGCAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS-3UTR CAA 90 bp | CTTGGGATACTTGCTATCCACTCCCTCTCCCTGAATCCTGCTTACTCTGGACCTTCTTCCTTTTTCCTCTaGTTAACTGACTCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGILAIHSLSLNPAYSGPSSFFL*LTDSLP Trigger: AGGAAGTGAGTCAGTTAACAAGAGGAAAAAGGAAGA...AGGTCCAGAGTAAGCAGGATTCAGGGAGAGGGAGTGGATAGCAAGTATCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS TCA 90 bp | AAAAGTATCCTTGCCAGTTTCATTCTCCACTTCCACATCTTCCATTaGCTCAAAGTACTGACTCCATGGGACAGGGGTAAAGTCCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KSILASFILHFHIFH*LKVLTPWDRGKVPL Trigger: AAGCGGGACTTTACCCCTGTCCCATGGAGTCAGTACTTTGAGTCAATGGAAGATGTGGAAGTGGAGAATGAAACTGGCAAGGATACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS CCA 90 bp | TTCCTCCTCCTCTATGATTCCTTCCACTATGGATTTGGAACCTTCTaGACTTGTAATTCCTTCACACTGTTTGACTTGGCCGACCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLLYDSFHYGFGTF*TCNSFTLFDLADHG Trigger: TCCATGGTCGGCCAAGTCAAACAGTGTGAAGGAATTACAAGTCCAGAAGGTTCCAAATCCATAGTGGAAGGAATCATAGAGGAGGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS GCA 90 bp | TTCTCCAAAGACTTGAAGGTTTTAGGTCGACCACGCAAGAAATTCTaGATGCTATTAAGTGCATCCATGGCGGTACCTTCTACAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: FSKDLKVLGRPRKKF*MLLSASMAVPSTTS Trigger: TGATGTTGTAGAAGGTACCGCCATGGATGCACTTAATAGCATGCAGAATTTCTTGCGTGGTCGACCTAAAACCTTCAAGTCTTTGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS GCA 72 bp | CCATCCGCATCTTGGCTCCGCTCTGACTGCCCCCGCTaGCGGGTAGAGGAGGGCGAGAAGGTAGGCGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PSASWLRSDCPR*RVEEGEKVGGR Trigger: TCGGCCGCCTACCTTCTCGCCCTCCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGGATGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS TCA 72 bp | TTCCGTCCAGGGCCCATCCGCATCTTGGCTCCGCTCTaGCTGCCCCCGCTGCCGGGTAGAGGAGGGCGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FRPGPIRILAPL*LPPLPGRGGRE Trigger: TTCTCGCCCTCCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGGATGGGCCCTGGACGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | GTCCAGGGCCCATCCGCATCTTGGCTCCGCTCTGACTaGCCCCGCTGCCGGGTAGAGGAGGGCGAGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VQGPSASWLRSD*PRCRVEEGEKV Trigger: TACCTTCTCGCCCTCCTCTACCCGGCAGCGGGGGCAGTCAGAGCGGAGCCAAGATGCGGATGGGCCCTGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | GCGGCTGTGTGCACTGCAATGGCGCCACCCATGCTGTaGCCAATCAGCATGACTGGAGGAGGGAGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AAVCTAMAPPML*PISMTGGGRSP Trigger: TGGAGACCTCCCTCCTCCAGTCATGCTGATTGGGCACAGCATGGGTGGCGCCATTGCAGTGCACACAGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | GAGGCTTGGTACCAGGTTAGCTGCGGCTGTGTGCACTaGAATGGCGCCACCCATGCTGTGCCCAATCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: EAWYQVSCGCVH*NGATHAVPNQH Trigger: ATGCTGATTGGGCACAGCATGGGTGGCGCCATTGCAGTGCACACAGCCGCAGCTAACCTGGTACCAAGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS TCA 72 bp | CTGCAATGGCGCCACCCATGCTGTGCCCAATCAGCATaGCTGGAGGAGGGAGGTCTCCATACATGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LQWRHPCCAQSA*LEEGGLHTWLP Trigger: TGGAAGCCATGTATGGAGACCTCCCTCCTCCAGTCATGCTGATTGGGCACAGCATGGGTGGCGCCATTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS CCA 72 bp | GCAACAGCTTCAGCTACCTTGTCAGGGGCATCCTCATaGACTGCATGGCCACACTGGGGTAAGACCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: ATASATLSGASS*TAWPHWGKTCI Trigger: GATGCAGGTCTTACCCCAGTGTGGCCATGCAGTCCATGAGGATGCCCCTGACAAGGTAGCTGAAGCTGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | GCCAGGAAACACACACTGGAATCCTCCAATGGGCTCTaGAAACCTGTGCCGGATCAGGAAAGTGGCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: ARKHTLESSNGL*KPVPDQESGNS Trigger: GCTGTTGCCACTTTCCTGATCCGGCACAGGTTTGCAGAGCCCATTGGAGGATTCCAGTGTGTGTTTCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS CCA 72 bp | CAATGGGCTCTGCAAACCTGTGCCGGATCAGGAAAGTaGCAACAGCTTCAGCTACCTTGTCAGGGGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: QWALQTCAGSGK*QQLQLPCQGHP Trigger: AGGATGCCCCTGACAAGGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGCACAGGTTTGCAGAGCCCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | ACACTGTACTCTACTGATGATTGCTGCCGTGAACACTaGCCAGGAAAGGGCGGAATGGCCTCCTCCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLYSTDDCCREH*PGKGGMASSMK Trigger: CTTCATGGAGGAGGCCATTCCGCCCTTTCCTGGGCAGTGTTCACGGCAGCAATCATCAGTAGAGTACAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | AGCCACAATCCTACACTGTACTCTACTGATGATTGCTaGCGTGAACACTGCCCAGGAAAGGGCGGAATGGCC | + |
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Preference number: 6 (lower is better) Translates to: SHNPTLYSTDDC*REHCPGKGGMA Trigger: GGCCATTCCGCCCTTTCCTGGGCAGTGTTCACGGCAGCAATCATCAGTAGAGTACAGTGTAGGATTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | ACACACTGGAATCCTCCAATGGGCTCTGCAAACCTGTaGCGGATCAGGAAAGTGGCAACAGCTTCAGCTACC | + |
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Preference number: 6 (lower is better) Translates to: THWNPPMGSANL*RIRKVATASAT Trigger: GGTAGCTGAAGCTGTTGCCACTTTCCTGATCCGGCACAGGTTTGCAGAGCCCATTGGAGGATTCCAGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS CCA 72 bp | GGCGGAATGGCCTCCTCCATGAAGCAGCAGCAGGACTaGACCCTCAGAACCACTCTTGTAAACTCGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GGMASSMKQQQD*TLRTTLVNSKS Trigger: ACTTTTCGAGTTTACAAGAGTGGTTCTGAGGGTCCAGTCCTGCTGCTGCTTCATGGAGGAGGCCATTCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | CAGAGCCACAATCCTACACTGTACTCTACTGATGATTaGTGCCGTGAACACTGCCCAGGAAAGGGCGGAATG | + |
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Preference number: 6 (lower is better) Translates to: QSHNPTLYSTDD*CREHCPGKGGM Trigger: CATTCCGCCCTTTCCTGGGCAGTGTTCACGGCAGCAATCATCAGTAGAGTACAGTGTAGGATTGTGGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS TCA 72 bp | TTCTCCACTTCCACATCTTCCATTGACTCAAAGTACTaGCTCCATGGGACAGGGGTAAAGTCCCGCTTCCGT | + |
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Preference number: 6 (lower is better) Translates to: FSTSTSSIDSKY*LHGTGVKSRFR Trigger: ACGGAAGCGGGACTTTACCCCTGTCCCATGGAGTCAGTACTTTGAGTCAATGGAAGATGTGGAAGTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS CCA 72 bp | TTCTACAACATCAATCATGCAAAGGCCCAAGAGGCTTaGTACCAGGTTAGCTGCGGCTGTGTGCACTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: FYNINHAKAQEA*YQVSCGCVHCN Trigger: ATTGCAGTGCACACAGCCGCAGCTAACCTGGTACCAAGCCTCTTGGGCCTTTGCATGATTGATGTTGTAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS CCA 72 bp | AGACCTGCATCTGGAACTTCCCCTGCATCTGGCCTATaGTCAGATCTTTATCCAATCTGTCAACACCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RPASGTSPASGL*SDLYPICQHLP Trigger: TGGCAGGTGTTGACAGATTGGATAAAGATCTGACCATAGGCCAGATGCAGGGGAAGTTCCAGATGCAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS TCA 72 bp | GACTGGGGATGCAGCTCAATTCTCCAGGTGTATGGGTaGTCCTTCTTGGTTTCCATGTCGTCTTCCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: DWGCSSILQVYG*SFLVSMSSSFF Trigger: GAAAAAGGAAGACGACATGGAAACCAAGAAGGATCACCCATACACCTGGAGAATTGAGCTGCATCCCCAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207634.2 |
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| CDS CCA 72 bp | ACCATGGATACACGGGCAGACTCAAGGTTTCGAATCTaGCCACTCTTCACACTCCATTCAATAGCATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TMDTRADSRFRI*PLFTLHSIAFS Trigger: GGAGAATGCTATTGAATGGAGTGTGAAGAGTGGCCAGATTCGAAACCTTGAGTCTGCCCGTGTATCCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS CCA 72 bp | CAAAGACTGGGGATGCAGCTCAATTCTCCAGGTGTATaGGTGATCCTTCTTGGTTTCCATGTCGTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QRLGMQLNSPGV*VILLGFHVVFL Trigger: AAGGAAGACGACATGGAAACCAAGAAGGATCACCCATACACCTGGAGAATTGAGCTGCATCCCCAGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207634.2 |
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| CDS TCA 72 bp | GACAGGTCTTCAGAATTCTTGACTTTAGTTTCTCCGTaGCCTCGCAGATCCAGAGCCACAATCCTACACTGT | + |
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Preference number: 6 (lower is better) Translates to: DRSSEFLTLVSP*PRRSRATILHC Trigger: ACAGTGTAGGATTGTGGCTCTGGATCTGCGAGGTCACGGAGAAACTAAAGTCAAGAATTCTGAAGACCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032963.10 |
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| CDS GCA 72 bp | GACTTGAAGGTTTTAGGTCGACCACGCAAGAAATTCTaGATGCTATTAAGTGCATCCATGGCGGTACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DLKVLGRPRKKF*MLLSASMAVPS Trigger: AGAAGGTACCGCCATGGATGCACTTAATAGCATGCAGAATTTCTTGCGTGGTCGACCTAAAACCTTCAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS GCA 72 bp | AGGTCGACCACGCAAGAAATTCTGCATGCTATTAAGTaGATCCATGGCGGTACCTTCTACAACATCAATCAT | + |
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Preference number: 6 (lower is better) Translates to: RSTTQEILHAIK*IHGGTFYNINH Trigger: ATGATTGATGTTGTAGAAGGTACCGCCATGGATGCACTTAATAGCATGCAGAATTTCTTGCGTGGTCGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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| CDS CAA 90 bp | ATCTGGCCACTCTTCACACTCCATTCAATAGCATTCTCCAAAGACTaGAAGGTTTTAGGTCGACCACGCAAGAAATTCTGCATGCTATTA | + |
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Preference number: 6 (lower is better) Translates to: IWPLFTLHSIAFSKD*KVLGRPRKKFCMLL Trigger: TAATAGCATGCAGAATTTCTTGCGTGGTCGACCTAAAACCTTCAAGTCTTTGGAGAATGCTATTGAATGGAGTGTGAAGAGTGGCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032963.10 ENSMUST00000207634.2 |
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