Pregenerated sensors for PPM1K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037826Ensembl transcript IDs: ENSMUST00000042766.6, ENSMUST00000204607.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGAACCCAACCACAGGTCACTCGCTCTCAGTGGTGGGACACATCTaGGTTCCCACAGTCCAGAATTCTGTGACACCATGGGCCATTCCA | + |
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Preference number: 1 (lower is better) Translates to: WNPTTGHSLSVVGHI*VPTVQNSVTPWAIP Trigger: TGGAATGGCCCATGGTGTCACAGAATTCTGGACTGTGGGAACTCAGATGTGTCCCACCACTGAGAGCGAGTGACCTGTGGTTGGGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 90 bp | GAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSGPSEEQSGAP Trigger: AGGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 90 bp | ATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCCTAACCACT | + |
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Preference number: 1 (lower is better) Translates to: ILLRMVVSHHVVAGI*TLDLRKSSRVLLTT Trigger: AGTGGTTAGGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 90 bp | ACTTTGTTCGGGGAGACAAGCTGTGGCTCAGGCTACCGTGGAACTTaGTCTGTAGCTCAGGCTAATTTCAAAGTTACCATCCCGATTCTC | + |
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Preference number: 1 (lower is better) Translates to: TLFGETSCGSGYRGT*SVAQANFKVTIPIL Trigger: GAGAATCGGGATGGTAACTTTGAAATTAGCCTGAGCTACAGAGCAAGTTCCACGGTAGCCTGAGCCACAGCTTGTCTCCCCGAACAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 90 bp | TGTGACACCATGGGCCATTCCAACCATGAGACAATCAGTGTGAGCTaGCACAGAAACTACTGGTCTTATTCCAGCTGCCAAAAGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: CDTMGHSNHETISVS*HRNYWSYSSCQKQQ Trigger: CTGCTGCTTTTGGCAGCTGGAATAAGACCAGTAGTTTCTGTGGCAGCTCACACTGATTGTCTCATGGTTGGAATGGCCCATGGTGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 90 bp | AATTCTGTGACACCATGGGCCATTCCAACCATGAGACAATCAGTGTaGGCTGCCACAGAAACTACTGGTCTTATTCCAGCTGCCAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: NSVTPWAIPTMRQSV*AATETTGLIPAAKS Trigger: GCTTTTGGCAGCTGGAATAAGACCAGTAGTTTCTGTGGCAGCTCACACTGATTGTCTCATGGTTGGAATGGCCCATGGTGTCACAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 90 bp | CATCAAATGGACCAAAACCGCTTCTTCTCCCATTCAGCTCAGAGATaGACAGCGGCTTCACAGCTGTGTTATGATGCTTACACTGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: HQMDQNRFFSHSAQR*TAASQLCYDAYTEH Trigger: ATGCTCAGTGTAAGCATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGAAGCGGTTTTGGTCCATTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 90 bp | ACATACGTGACACCTAATAAAATGTCTCTTACAGCCATTTGTTGCTaGTACTTTGTTCGGGGAGACAAGCTGTGGCTCAGGCTACCGTGG | + |
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Preference number: 1 (lower is better) Translates to: TYVTPNKMSLTAICC*YFVRGDKLWLRLPW Trigger: CCACGGTAGCCTGAGCCACAGCTTGTCTCCCCGAACAAAGTATCAGCAACAAATGGCTGTAAGAGACATTTTATTAGGTGTCACGTATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 90 bp | CAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTaGCACATGCCTTTAATTCCAGTACTTGGGAGGCAGAGGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: QVLHTLKSCFQARMW*HMPLIPVLGRQRQA Trigger: TGCCTGCCTCTGCCTCCCAAGTACTGGAATTAAAGGCATGTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 90 bp | AGAAATGCAGCAGAAATTCAGTTAATTCAGGTTATACCACAGTGGTaGCTTTTGCACTGGAACCCAACCACAGGTCACTCGCTCTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RNAAEIQLIQVIPQW*LLHWNPTTGHSLSV Trigger: CACTGAGAGCGAGTGACCTGTGGTTGGGTTCCAGTGCAAAAGTCACCACTGTGGTATAACCTGAATTAACTGAATTTCTGCTGCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 90 bp | ACAATCAGTGTGAGCTGCCACAGAAACTACTGGTCTTATTCCAGCTaGCAAAAGCAGCAGGCAAGTCAACATTTGGTTTCTTCATCTTGT | + |
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Preference number: 1 (lower is better) Translates to: TISVSCHRNYWSYSS*QKQQASQHLVSSSC Trigger: ACAAGATGAAGAAACCAAATGTTGACTTGCCTGCTGCTTTTGGCAGCTGGAATAAGACCAGTAGTTTCTGTGGCAGCTCACACTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 90 bp | TTACAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTaGTGGCACATGCCTTTAATTCCAGTACTTGGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: LQVLHTLKSCFQARM*WHMPLIPVLGRQRQ Trigger: CTGCCTCTGCCTCCCAAGTACTGGAATTAAAGGCATGTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 90 bp | TTGTCCTGTGGCCTGGTCTGTCTGGTTTCCCTTTCATTAAAAGCCTaGCCTCAGAGGATCACAGTGATGCTGCTTTATGTTAATATATAT | + |
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Preference number: 1 (lower is better) Translates to: LSCGLVCLVSLSLKA*PQRITVMLLYVNIY Trigger: ATATATATTAACATAAAGCAGCATCACTGTGATCCTCTGAGGTCAGGCTTTTAATGAAAGGGAAACCAGACAGACCAGGCCACAGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| 3UTR CCA 90 bp | GTCTCCTCCTTAAGTCCTGAGATTATAGGTAGAGGCCACCAATACTaGCCCCCATATTTATTTGTAATCCATAGTGGTTATCTACCAGTA | + |
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Preference number: 1 (lower is better) Translates to: VSSLSPEIIGRGHQY*PPYLFVIHSGYLPV Trigger: TACTGGTAGATAACCACTATGGATTACAAATAAATATGGGGGCCAGTATTGGTGGCCTCTACCTATAATCTCAGGACTTAAGGAGGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 90 bp | TGTATGAACTGTCAGCACTTGCTCATGAGAACTATTATGCAATCATaGATCAAATTCACTGTGACACTCCAGCTAAAACACCCTTTGCCG | + |
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Preference number: 1 (lower is better) Translates to: CMNCQHLLMRTIMQS*IKFTVTLQLKHPLP Trigger: CGGCAAAGGGTGTTTTAGCTGGAGTGTCACAGTGAATTTGATTCATGATTGCATAATAGTTCTCATGAGCAAGTGCTGACAGTTCATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| 3UTR CCA 90 bp | AAAAACGCTACATACAAACCACACAGCAACAAACTTACACAAGATTaGCACTGTCAGTGTTTCACTTTACAGATTTTGACCAAAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: KNATYKPHSNKLTQD*HCQCFTLQILTKAS Trigger: TGAGGCTTTGGTCAAAATCTGTAAAGTGAAACACTGACAGTGCCAATCTTGTGTAAGTTTGTTGCTGTGTGGTTTGTATGTAGCGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CAA 90 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCCTAACCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGAPNH Trigger: GTGGTTAGGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCTGTCTAAACACACACCTACACACTCCTAACCTCACCGCCACCATCAAAGTGTATTTTGTCCCTTaGCCTGGGCTCTTGCTATTC | + |
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Preference number: 2 (lower is better) Translates to: QVCLNTHLHTPNLTATIKVYFVP*PGLLLF Trigger: GAATAGCAAGAGCCCAGGTCAAGGGACAAAATACAC...TTTGATGGTGGCGGTGAGGTTAGGAGTGTGTAGGTGTGTGTTTAGACAGACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAAAAGCAGCAGGCAAGTCAACATTTGGTTTCTTCATCTTGTTAAACACAGTCTACAGGAAAGGATaGAGCCCAGTCCCTATGGAG | + |
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Preference number: 2 (lower is better) Translates to: LPKAAGKSTFGFFILLNTVYRKG*SPVPME Trigger: CTCCATAGGGACTGGGCTGCATCCTTTCCTGTAGAC...TGTGTTTAACAAGATGAAGAAACCAAATGTTGACTTGCCTGCTGCTTTTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTCAGGCTACCGTGGAACTTGCTCTGTAGCTCAGGCTAATTTCAAAGTTATACTACTGGGTATGTaGCTGGTAAGCTTATACTGT | + |
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Preference number: 2 (lower is better) Translates to: CGSGYRGTCSVAQANFKVILLGM*LVSLYC Trigger: ACAGTATAAGCTTACCAGCCACATACCCAGTAGTAT...AACTTTGAAATTAGCCTGAGCTACAGAGCAAGTTCCACGGTAGCCTGAGCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCTGTCTAAACACACACCTACACACTCCTAACCTCACCGCCACCATCAAACAGAATATTCTTCTCTaGAGCTTACCGAACAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: QVCLNTHLHTPNLTATIKQNILL*SLPNSY Trigger: GTAACTGTTCGGTAAGCTCCAGAGAAGAATATTCTG...TTTGATGGTGGCGGTGAGGTTAGGAGTGTGTAGGTGTGTGTTTAGACAGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR CCA 90 bp | TGCACAGAAAGTGGTATAAAAACGCTACATACAAACCACACAGCAACAAACTTAACACACGGGTACAGGTaGCCTTCTGTGTGTTACCAG | + |
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Preference number: 2 (lower is better) Translates to: CTESGIKTLHTNHTATNLTHGYR*PSVCYQ Trigger: CTGGTAACACACAGAAGGCCACCTGTACCCGTGTGT...TAAGTTTGTTGCTGTGTGGTTTGTATGTAGCGTTTTTATACCACTTTCTGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR GCA 90 bp | TTACAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTGGCACCAGCTAGCTGATAAATaGGCCACAAGATTGTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LQVLHTLKSCFQARMWWHQLADK*ATRLFP Trigger: AGGGAACAATCTTGTGGCGCATTTATCAGCTAGCTG...GTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CAA 90 bp | GCGGCTTCACAGCTGTGTTATGATGCTTACACTGAGCATGTGCAGTaGACCATAATGATGATGAGGATTTATGAAAATACTACTGGGTAT | + |
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Preference number: 2 (lower is better) Translates to: AASQLCYDAYTEHVQ*TIMMMRIYENTTGY Trigger: ATACCCAGTAGTATTTTCATAAATCCTCATCATCATTATGGTCAACTGCACATGCTCAGTGTAAGCATCATAACACAGCTGTGAAGCCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CAA 90 bp | CAGCTGCCAAAAGCAGCAGGCAAGTCAACATTTGGTTTCTTCATCTaGTTAAACACAACTTGCTATTCCTGCTTAAGCCATTCTCATAAT | + |
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Preference number: 2 (lower is better) Translates to: QLPKAAGKSTFGFFI*LNTTCYSCLSHSHN Trigger: ATTATGAGAATGGCTTAAGCAGGAATAGCAAGTTGTGTTTAACAAGATGAAGAAACCAAATGTTGACTTGCCTGCTGCTTTTGGCAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CAA 90 bp | AATGGAAAACACAAACACATGGCTAGAGTTTATTTAACTCCAAACTaGAACTCCCCAGGTCCCACCCTGAAACATTCTCATAACATGAAA | + |
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Preference number: 2 (lower is better) Translates to: NGKHKHMARVYLTPN*NSPGPTLKHSHNMK Trigger: TTTCATGTTATGAGAATGTTTCAGGGTGGGACCTGGGGAGTTCAAGTTTGGAGTTAAATAAACTCTAGCCATGTGTTTGTGTTTTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGTTTCTTCATCTTGTTAAACACAACTTGCTATTCCTGCTTAAGCCATTCAGAGGCCACCAATACTaGCCCCCATATTTATTTGTA | + |
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Preference number: 2 (lower is better) Translates to: IWFLHLVKHNLLFLLKPFRGHQY*PPYLFV Trigger: TACAAATAAATATGGGGGCCAGTATTGGTGGCCTCT...GAATGGCTTAAGCAGGAATAGCAAGTTGTGTTTAACAAGATGAAGAAACCAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 72 bp | CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TLDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 72 bp | ACCACAGGTCACTCGCTCTCAGTGGTGGGACACATCTaGGTTCCCACAGTCCAGAATTCTGTGACACCATGG | + |
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Preference number: 3 (lower is better) Translates to: TTGHSLSVVGHI*VPTVQNSVTPW Trigger: CCATGGTGTCACAGAATTCTGGACTGTGGGAACTCAGATGTGTCCCACCACTGAGAGCGAGTGACCTGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 72 bp | GCACGTCCTCTACTCTCTTCCGTGTATTTTGTCCCTTaGCCTGGGCTCTTGCTATTCAGGATGACTGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: ARPLLSSVYFVP*PGLLLFRMTVP Trigger: GGGCACAGTCATCCTGAATAGCAAGAGCCCAGGTCAAGGGACAAAATACACGGAAGAGAGTAGAGGACGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 72 bp | CTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 72 bp | TCCTCTACTCTCTTCCGTGTATTTTGTCCCTTGACCTaGGCTCTTGCTATTCAGGATGACTGTGCCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSTLFRVFCPLT*ALAIQDDCAPA Trigger: GGCTGGGGCACAGTCATCCTGAATAGCAAGAGCCCAGGTCAAGGGACAAAATACACGGAAGAGAGTAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 72 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 72 bp | GACCAAAACCGCTTCTTCTCCCATTCAGCTCAGAGATaGACAGCGGCTTCACAGCTGTGTTATGATGCTTAC | + |
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Preference number: 3 (lower is better) Translates to: DQNRFFSHSAQR*TAASQLCYDAY Trigger: GTAAGCATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGAAGCGGTTTTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 72 bp | ACACCATGGGCCATTCCAACCATGAGACAATCAGTGTaGGCTGCCACAGAAACTACTGGTCTTATTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: TPWAIPTMRQSV*AATETTGLIPA Trigger: AGCTGGAATAAGACCAGTAGTTTCTGTGGCAGCTCACACTGATTGTCTCATGGTTGGAATGGCCCATGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 72 bp | CATGAGACAATCAGTGTGAGCTGCCACAGAAACTACTaGTCTTATTCCAGCTGCCAAAAGCAGCAGGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: HETISVSCHRNY*SYSSCQKQQAS Trigger: ACTTGCCTGCTGCTTTTGGCAGCTGGAATAAGACCAGTAGTTTCTGTGGCAGCTCACACTGATTGTCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 72 bp | GGCCTGGTCTGTCTGGTTTCCCTTTCATTAAAAGCCTaGCCTCAGAGGATCACAGTGATGCTGCTTTATGTT | + |
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Preference number: 3 (lower is better) Translates to: GLVCLVSLSLKA*PQRITVMLLYV Trigger: AACATAAAGCAGCATCACTGTGATCCTCTGAGGTCAGGCTTTTAATGAAAGGGAAACCAGACAGACCAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| 3UTR GCA 72 bp | GGGAACAGCCCAAATCTTATGGCCCTGTGTTTTACATaGACAGGAATATGGGGAACCCTCACAGTAATGGAA | + |
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Preference number: 3 (lower is better) Translates to: GNSPNLMALCFT*TGIWGTLTVME Trigger: TTCCATTACTGTGAGGGTTCCCCATATTCCTGTGCATGTAAAACACAGGGCCATAAGATTTGGGCTGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 72 bp | GCAGAAATTCAGTTAATTCAGGTTATACCACAGTGGTaGCTTTTGCACTGGAACCCAACCACAGGTCACTCG | + |
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Preference number: 3 (lower is better) Translates to: AEIQLIQVIPQW*LLHWNPTTGHS Trigger: CGAGTGACCTGTGGTTGGGTTCCAGTGCAAAAGTCACCACTGTGGTATAACCTGAATTAACTGAATTTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 72 bp | CCATCAAAAGCTTTTTCCAGAAGAAACAGGCTCAAATaGGCCCAAGGCCATCATCTACAGATTCCTCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: PSKAFSRRNRLK*AQGHHLQIPPC Trigger: ACAAGGAGGAATCTGTAGATGATGGCCTTGGGCGCATTTGAGCCTGTTTCTTCTGGAAAAAGCTTTTGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR TCA 72 bp | ACACCTAATAAAATGTCTCTTACAGCCATTTGTTGCTaGTACTTTGTTCGGGGAGACAAGCTGTGGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: TPNKMSLTAICC*YFVRGDKLWLR Trigger: CCTGAGCCACAGCTTGTCTCCCCGAACAAAGTATCAGCAACAAATGGCTGTAAGAGACATTTTATTAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 72 bp | TTGAACCCAGGAGTTCAAGGTCAGCCAGTGAAAACCTaGTTTCTACAGAGAAAGGAAAAAGGAACACTTGCA | + |
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Preference number: 3 (lower is better) Translates to: LNPGVQGQPVKT*FLQRKEKGTLA Trigger: TGCAAGTGTTCCTTTTTCCTTTCTCTGTAGAAAGCAGGTTTTCACTGGCTGACCTTGAACTCCTGGGTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 72 bp | CATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTaGCACATGCCTTTAATTCCAGTACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: HTLKSCFQARMW*HMPLIPVLGRQ Trigger: CTGCCTCCCAAGTACTGGAATTAAAGGCATGTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGTCTGTCTAAACACACACCTACACACTCCTAACCTCACCGCCACCATCAAAATGTCTGGAAAAGCATaGTTTCTTTCAACTGACATC | + |
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Preference number: 3 (lower is better) Translates to: QVCLNTHLHTPNLTATIKMSGKA*FLSTDI Trigger: GATGTCAGTTGAAAGAAACAATGCTTTTCCAGACAT...TTTGATGGTGGCGGTGAGGTTAGGAGTGTGTAGGTGTGTGTTTAGACAGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR GCA 72 bp | TTTATCTCTTATATCCCTTGTATCCCTCCCTTGGAATaGCCCCATCTCCTAGGTATATGTTCTCACTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: FISYIPCIPPLE*PHLLGICSHSS Trigger: AGAAGAGTGAGAACATATACCTAGGAGATGGGGGCATTCCAAGGGAGGGATACAAGGGATATAAGAGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 72 bp | CCTTACAAAGGAAACACAGATTCATCACTCATCAAATaGACCAAAACCGCTTCTTCTCCCATTCAGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: PYKGNTDSSLIK*TKTASSPIQLR Trigger: TCTGAGCTGAATGGGAGAAGAAGCGGTTTTGGTCCATTTGATGAGTGATGAATCTGTGTTTCCTTTGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR CAA 90 bp | CTTAACAAATGTGTGTTAAGAAAGTCTACAGGAAAGGATGCAGCCCAGTCCCTACAAACTTACACAAGATaGGCACTGTCAGTGTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: LNKCVLRKSTGKDAAQSLQTYTR*ALSVFH Trigger: GTGAAACACTGACAGTGCCAATCTTGTGTAAGTTTG...TAGGGACTGGGCTGCATCCTTTCCTGTAGACTTTCTTAACACACATTTGTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CCA 72 bp | AATCTTATGGCCCTGTGTTTTACATGCACAGGAATATaGGGAACCCTCACAGTAATGGAAAACACAAACACA | + |
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Preference number: 3 (lower is better) Translates to: NLMALCFTCTGI*GTLTVMENTNT Trigger: TGTGTTTGTGTTTTCCATTACTGTGAGGGTTCCCCATATTCCTGTGCATGTAAAACACAGGGCCATAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR-3UTR CAA 90 bp | ATTTGGTTTCTTCATCTTGTTAAACACAACTTGCTATTCCTGCTTAAGCCATTCGACCAGAGCCTAGATTaGAAGCAGCTAAGAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: IWFLHLVKHNLLFLLKPFDQSLD*KQLRDT Trigger: TGTGTCTCTTAGCTGCTTCAAATCTAGGCTCTGGTC...GAATGGCTTAAGCAGGAATAGCAAGTTGTGTTTAACAAGATGAAGAAACCAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR GCA 72 bp | ATCTTTACTAACAAAGGCCCCAACTCGCTTACTGTGTaGACAGAAAGTGGTATAAAAACGCTACATACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IFTNKGPNSLTV*TESGIKTLHTN Trigger: GTTTGTATGTAGCGTTTTTATACCACTTTCTGTGCACACAGTAAGCGAGTTGGGGCCTTTGTTAGTAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGTTTCTTCATCTTGTTAAACACAACTTGCTATTCCTGCTTAAGCCATTCTGTGTTACCAGTTTCTaGATAAGCCCACTGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: IWFLHLVKHNLLFLLKPFCVTSF*ISPLTL Trigger: CAGTGTCAGTGGGCTTATCAAGAAACTGGTAACACA...GAATGGCTTAAGCAGGAATAGCAAGTTGTGTTTAACAAGATGAAGAAACCAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CCA 72 bp | TTAAGTCCTGAGATTATAGGTAGAGGCCACCAATACTaGCCCCCATATTTATTTGTAATCCATAGTGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LSPEIIGRGHQY*PPYLFVIHSGY Trigger: ATAACCACTATGGATTACAAATAAATATGGGGGCCAGTATTGGTGGCCTCTACCTATAATCTCAGGACTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR TCA 72 bp | AGCCATGTATTTTGCAGGGTTAAATTTACTAATAAGTaGTCCAGAGTACACTATTCAGTCATAGAGAACCTA | + |
|
Preference number: 3 (lower is better) Translates to: SHVFCRVKFTNK*SRVHYSVIENL Trigger: TAGGTTCTCTATGACTGAATAGTGTACTCTGGATCACTTATTAGTAAATTTAACCCTGCAAAATACATGGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | TCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGCTTACACTGAGGGAGTCGCCTGCCTGTaGTCCTGCAGGAGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAQRCTAASQLCYDAYTEGVACL*SCRRME Trigger: CTCCATCCTCCTGCAGGACCACAGGCAGGCGACTCC...CTCAGTGTAAGCATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCCCATTCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGACAGAAGTCAGCGGCTaGAGGGCCCCCATGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSPIQLRDAQRLHSCVMMTEVSG*RAPMSI Trigger: GATGGACATGGGGGCCCTGCAGCCGCTGACTTCTGT...CATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | CCAGCTAAAACACCCTTTGCCGGTGGTGCTGTCCCTAATCCTCTCCTCCCTGGGAGTCTGCCATTTACATaGGGCTGTCCCAAACTATTC | + |
|
Preference number: 4 (lower is better) Translates to: PAKTPFAGGAVPNPLLPGSLPFT*GCPKLF Trigger: GAATAGTTTGGGACAGCCCCATGTAAATGGCAGACT...CCCAGGGAGGAGAGGATTAGGGACAGCACCACCGGCAAAGGGTGTTTTAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
||
| CDS-3UTR TCA 90 bp | ACGGGTACAGGTGGCCTTCTGTGTGTTACCAGTTTCTTGATAAGCCCACTGACACTTTCCGTTTGCCAATaGGAGAGGCACAGCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TGTGGLLCVTSFLISPLTLSVCQ*ERHSPR Trigger: ACGTGGGCTGTGCCTCTCTCATTGGCAAACGGAAAG...TGTCAGTGGGCTTATCAAGAAACTGGTAACACACAGAAGGCCACCTGTACCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | CAAGTCTGTCTAAACACACACCTACACACTCCTAACCTCACCGCCACCATCAAAGCCTGCCTGTGGTCCTaGAGGAGGATGGAGCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVCLNTHLHTPNLTATIKACLWS*RRMELN Trigger: GTTAAGCTCCATCCTCCTGCAGGACCACAGGCAGGC...TTTGATGGTGGCGGTGAGGTTAGGAGTGTGTAGGTGTGTGTTTAGACAGACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | CTTAACAAATGTGTGTTAAGAAAGTCTACAGGAAAGGATGCAGCCCAGTCCCTACAGGCAGGAGTCGCCTaGCTGTGGTCCTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNKCVLRKSTGKDAAQSLQAGVA*LWSCRR Trigger: CCTCCTGCAGGACCACAGGCAGGCGACTCCTGCCTG...TAGGGACTGGGCTGCATCCTTTCCTGTAGACTTTCTTAACACACATTTGTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCCCATTCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGTCCCAAGTGGCTGGCTaGCCACTTCCATCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPIQLRDAQRLHSCVMMSQVAG*PLPSGS Trigger: TGATCCAGATGGAAGTGGGCAGCCAGCCACTTGGGA...CATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCCCATTCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGCAGGAGGCTTGCATCTaGAGACAGGTGGGCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSPIQLRDAQRLHSCVMMQEACI*RQVGIT Trigger: AGTTATGCCCACCTGTCTGCAGATGCAAGCCTCCTG...CATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CAA 72 bp | ACGGGTACAGGTGGCCTTCTGTGTGTTACCAGTTTCTaGATAAGCCCACTGACACTGCTGCATAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGTGGLLCVTSF*ISPLTLLHRNS Trigger: GGAGTTCCTATGCAGCAGTGTCAGTGGGCTTATCAAGAAACTGGTAACACACAGAAGGCCACCTGTACCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CAA 72 bp | GCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTaGTTACGGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHTRRGSQI*LRMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGACTCCCTCTTCTGGTGTGTCTGAAGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CAA 72 bp | AGCACGTCCTCTACTCTCTTCCGTGTATTTTGTCCCTaGACCTGGGCTCTTGCTATTCAGGATGACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: STSSTLFRVFCP*TWALAIQDDCA Trigger: GGCACAGTCATCCTGAATAGCAAGAGCCCAGGTCAAGGGACAAAATACACGGAAGAGAGTAGAGGACGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CAA 72 bp | ATCAAATTCACTGTGACACTCCAGCTAAAACACCCTTaGCCGGTGGTGCTGTCCCTAATCCTCTCCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKFTVTLQLKHP*PVVLSLILSSL Trigger: CAGGGAGGAGAGGATTAGGGACAGCACCACCGGCAAAGGGTGTTTTAGCTGGAGTGTCACAGTGAATTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGCTTACACTGAGCAAACCGAGAACACCTaGCCTCTGAAGTGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAQRCTAASQLCYDAYTEQTENT*PLKWRS Trigger: ACTTCTCCACTTCAGAGGCCAGGTGTTCTCGGTTTG...CTCAGTGTAAGCATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | CAAGTCTGTCTAAACACACACCTACACACTCCTAACCTCACCGCCACCATCAAACAAAATTGTCCCAAGTaGCTGGCTGCCCACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVCLNTHLHTPNLTATIKQNCPK*LAAHFH Trigger: ATGGAAGTGGGCAGCCAGCCACTTGGGACAATTTTG...TTTGATGGTGGCGGTGAGGTTAGGAGTGTGTAGGTGTGTGTTTAGACAGACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | ACGGGTACAGGTGGCCTTCTGTGTGTTACCAGTTTCTTGATAAGCCCACTGACACTCTTCTGTCAGCTGTaGAAACCCAAATCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTGGLLCVTSFLISPLTLFCQL*KPKSIF Trigger: GAAGATCGATTTGGGTTTGCACAGCTGACAGAAGAG...TGTCAGTGGGCTTATCAAGAAACTGGTAACACACAGAAGGCCACCTGTACCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | AGACCATTTGAACCCAGGAGTTCAAGGTCAGCCAGTGAAAACCTGCTTTCTACAGGTACCGTACTGTATTaGCTGCTCAGTCACCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RPFEPRSSRSASENLLSTGTVLY*LLSHRM Trigger: CATTCGGTGACTGAGCAGGCAATACAGTACGGTACC...TGTAGAAAGCAGGTTTTCACTGGCTGACCTTGAACTCCTGGGTTCAAATGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | CTTAACAAATGTGTGTTAAGAAAGTCTACAGGAAAGGATGCAGCCCAGTCCCTAACCTGGCCTCTGAAGTaGAGAAGTAGCAGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNKCVLRKSTGKDAAQSLTWPLK*RSSRQE Trigger: CTCCTGCCTGCTACTTCTCCACTTCAGAGGCCAGGT...TAGGGACTGGGCTGCATCCTTTCCTGTAGACTTTCTTAACACACATTTGTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCCCATTCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGAGTCTGCCATTTACATaGGGCTGTCCCAAACTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPIQLRDAQRLHSCVMMSLPFT*GCPKLF Trigger: GAATAGTTTGGGACAGCCCCATGTAAATGGCAGACT...CATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR TCA 90 bp | TACAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTGGCACAAGAACACCTGGCCTCTaGAGTGGAGAAGTAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKFSILLKVVFKPGCGGTRTPGL*SGEVAG Trigger: GCCTGCTACTTCTCCACTTCAGAGGCCAGGTGTTCT...TGTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCACCAATACTGGCCCCCATATTTATTTGTAATCCATAGTGGTTATCTAATTGTCCCAAGTGGCTaGCTGCCCACTTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGHQYWPPYLFVIHSGYLIVPSG*LPTSIW Trigger: CCAGATGGAAGTGGGCAGCCAGCCACTTGGGACAAT...TAGATAACCACTATGGATTACAAATAAATATGGGGGCCAGTATTGGTGGCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | CAAGTCTGTCTAAACACACACCTACACACTCCTAACCTCACCGCCACCATCAAACTCATCTTTTCTTTCTaGGGTATGGTCAGTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVCLNTHLHTPNLTATIKLIFSF*GMVSGQ Trigger: CTGACCACTGACCATACCCCAGAAAGAAAAGATGAG...TTTGATGGTGGCGGTGAGGTTAGGAGTGTGTAGGTGTGTGTTTAGACAGACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | AGACCATTTGAACCCAGGAGTTCAAGGTCAGCCAGTGAAAACCTGCTTTCTACATTGTCATTGCAAGTCTaGCATTTACATGGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPFEPRSSRSASENLLSTLSLQV*HLHGAV Trigger: GACAGCCCCATGTAAATGGCAGACTTGCAATGACAA...TGTAGAAAGCAGGTTTTCACTGGCTGACCTTGAACTCCTGGGTTCAAATGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | TCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGCTTACACTGAGGATACTCCTTGTCATTaGAAGTCTGCCATTTACATG | + |
|
Preference number: 4 (lower is better) Translates to: SAQRCTAASQLCYDAYTEDTPCH*KSAIYM Trigger: CATGTAAATGGCAGACTTGCAATGACAAGGAGTATC...CTCAGTGTAAGCATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCACCAATACTGGCCCCCATATTTATTTGTAATCCATAGTGGTTATCTAGCACCACTACTGCAGTaGTGTTGTCTTCGGTACCGT | + |
|
Preference number: 4 (lower is better) Translates to: RGHQYWPPYLFVIHSGYLAPLLQ*CCLRYR Trigger: ACGGTACCGAAGACAACAGCACTGCAGTAGTGGTGC...TAGATAACCACTATGGATTACAAATAAATATGGGGGCCAGTATTGGTGGCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | AGACCATTTGAACCCAGGAGTTCAAGGTCAGCCAGTGAAAACCTGCTTTCTACATTTCTTTCTGGGGTATaGTCAGTGGTCAGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RPFEPRSSRSASENLLSTFLSGV*SVVSFM Trigger: CATGAAGCTGACCACTGACCATACCCCAGAAAGAAA...TGTAGAAAGCAGGTTTTCACTGGCTGACCTTGAACTCCTGGGTTCAAATGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | ATCATGAATCAAATTCACTGTGACACTCCAGCTAAAACACCCTTTGCCGGTGGTTTAGGATCGTGGCACTaGTTGACAAAGTCGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: IMNQIHCDTPAKTPFAGGLGSWH*LTKSQI Trigger: GATCTGCGACTTTGTCAACCAGTGCCACGATCCTAA...ACCACCGGCAAAGGGTGTTTTAGCTGGAGTGTCACAGTGAATTTGATTCATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
||
| 3UTR CAA 72 bp | ATAAAATGTCTCTTACAGCCATTTGTTGCTGATACTTaGTTCGGGGAGACAAGCTGTGGCTCAGGCTACCGT | + |
|
Preference number: 4 (lower is better) Translates to: IKCLLQPFVADT*FGETSCGSGYR Trigger: ACGGTAGCCTGAGCCACAGCTTGTCTCCCCGAACAAAGTATCAGCAACAAATGGCTGTAAGAGACATTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CAA 72 bp | GATCCTTTGACCCCAGATGAGGACCAGAGCCTAGATTaGAAGCAGCTAAGAGACACAAAGAATCCTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: DPLTPDEDQSLD*KQLRDTKNPNT Trigger: TGTGTTAGGATTCTTTGTGTCTCTTAGCTGCTTCAAATCTAGGCTCTGGTCCTCATCTGGGGTCAAAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | TTACAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTGGCACCTGCCCACTTCCATCTaGATCAAACCGAGAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: LQVLHTLKSCFQARMWWHLPTSI*IKPRTP Trigger: AGGTGTTCTCGGTTTGATCCAGATGGAAGTGGGCAG...GTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CAA 72 bp | AAAATGTACCTTGTATCCCTTTATCTCTTATATCCCTaGTATCCCTCCCTTGGAATGCCCCCATCTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KMYLVSLYLLYP*YPSLGMPPSPR Trigger: CCTAGGAGATGGGGGCATTCCAAGGGAGGGATACAAGGGATATAAGAGATAAAGGGATACAAGGTACATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | TACAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTGGCACAGTACTTGATGCTAGGTaGCAGCAGAATTGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: YKFSILLKVVFKPGCGGTVLDAR*QQNWLI Trigger: GATGAGCCAATTCTGCTGCCACCTAGCATCAAGTAC...TGTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAAAGCAGCAGGCAAGTCAACATTTGGTTTCTTCATCTTGTTAAACACATTAGGATCGTGGCACTaGTTGACAAAGTCGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPKAAGKSTFGFFILLNTLGSWH*LTKSQI Trigger: GATCTGCGACTTTGTCAACCAGTGCCACGATCCTAA...TGTGTTTAACAAGATGAAGAAACCAAATGTTGACTTGCCTGCTGCTTTTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | TACAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTGGCACAGCTTCTTTAGGATCGTaGCACTGGTTGACAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YKFSILLKVVFKPGCGGTASLGS*HWLTKS Trigger: CGACTTTGTCAACCAGTGCCACGATCCTAAAGAAGC...TGTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| 3UTR CAA 72 bp | CACAAACACATGGCTAGAGTTTATTTAACTCCAAACTaGAACTCCCCAGGTCCCACCCTGAAACATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HKHMARVYLTPN*NSPGPTLKHSH Trigger: ATGAGAATGTTTCAGGGTGGGACCTGGGGAGTTCAAGTTTGGAGTTAAATAAACTCTAGCCATGTGTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAAAGCAGCAGGCAAGTCAACATTTGGTTTCTTCATCTTGTTAAACACAGAATTGGCTCATCAATaGGGTTATCCCAGATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPKAAGKSTFGFFILLNTELAHQ*GYPRSQ Trigger: TTGGGATCTGGGATAACCGCATTGATGAGCCAATTC...TGTGTTTAACAAGATGAAGAAACCAAATGTTGACTTGCCTGCTGCTTTTGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | ATTTGGTTTCTTCATCTTGTTAAACACAACTTGCTATTCCTGCTTAAGCCATTCCAACAGGGCTACTGTTaGAGTAGTCCCAGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWFLHLVKHNLLFLLKPFQQGYC*SSPRGQ Trigger: CTGACCTCTGGGACTACTGCAACAGTAGCCCTGTTG...GAATGGCTTAAGCAGGAATAGCAAGTTGTGTTTAACAAGATGAAGAAACCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR GCA 90 bp | TATGCAATCATGAATCAAATTCACTGTGACACTCCAGCTAAAACACCCTTTGCCTTGTCATTGCAAGTCTaGCATTTACATGGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YAIMNQIHCDTPAKTPFALSLQV*HLHGAV Trigger: GACAGCCCCATGTAAATGGCAGACTTGCAATGACAA...GGCAAAGGGTGTTTTAGCTGGAGTGTCACAGTGAATTTGATTCATGATTGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
||
| CDS-3UTR CCA 90 bp | CACCAATACTGGCCCCCATATTTATTTGTAATCCATAGTGGTTATCTACCAGTAAGGTGGCAGCAGAATTaGCTCATCAATGCGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: HQYWPPYLFVIHSGYLPVRWQQN*LINAVI Trigger: GATAACCGCATTGATGAGCCAATTCTGCTGCCACCT...TACTGGTAGATAACCACTATGGATTACAAATAAATATGGGGGCCAGTATTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | TGCACAGAAAGTGGTATAAAAACGCTACATACAAACCACACAGCAACAAACTTACTGGGGTATGGTCAGTaGTCAGCTTCATGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTESGIKTLHTNHTATNLLGYGQ*SASWVF Trigger: GAAAACCCATGAAGCTGACCACTGACCATACCCCAG...TAAGTTTGTTGCTGTGTGGTTTGTATGTAGCGTTTTTATACCACTTTCTGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | CTTAACAAATGTGTGTTAAGAAAGTCTACAGGAAAGGATGCAGCCCAGTCCCTAGCTAATTTTGGGAATTaGTTTGCCGTACTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNKCVLRKSTGKDAAQSLANFGN*FAVLDA Trigger: AGCATCAAGTACGGCAAACCAATTCCCAAAATTAGC...TAGGGACTGGGCTGCATCCTTTCCTGTAGACTTTCTTAACACACATTTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTTGTGTTCAAAGTTAGAAGGCCCACTCCACATTTCCTTAATGTATGAAGCTTCTTTAGGATCGTaGCACTGGTTGACAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FKLCSKLEGPLHISLMYEASLGS*HWLTKS Trigger: CGACTTTGTCAACCAGTGCCACGATCCTAAAGAAGC...TTCATACATTAAGGAAATGTGGAGTGGGCCTTCTAACTTTGAACACAACTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| CDS-3UTR TCA 90 bp | ATTTGGTTTCTTCATCTTGTTAAACACAACTTGCTATTCCTGCTTAAGCCATTCACTCTCTTCTTCACCTaGTTCCCACCACTTCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IWFLHLVKHNLLFLLKPFTLFFT*FPPLLN Trigger: GTTGAGAAGTGGTGGGAATCAGGTGAAGAAGAGAGT...GAATGGCTTAAGCAGGAATAGCAAGTTGTGTTTAACAAGATGAAGAAACCAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR TCA 90 bp | TACAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTGGCACAACCCACCGAATTTCTTaGTCCTTTCTTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YKFSILLKVVFKPGCGGTTHRIS*SFLSHL Trigger: AAGATGAGAAAGAAAGGATCAAGAAATTCGGTGGGT...TGTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR TCA 90 bp | CACCAATACTGGCCCCCATATTTATTTGTAATCCATAGTGGTTATCTACCAGTAAAGTCGCAGATCTCTTaGCTATTCACCATGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HQYWPPYLFVIHSGYLPVKSQIS*LFTMKL Trigger: TAACTTCATGGTGAATAGTCAAGAGATCTGCGACTT...TACTGGTAGATAACCACTATGGATTACAAATAAATATGGGGGCCAGTATTGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| 3UTR CAA 72 bp | AAAGCAGCAGGCAAGTCAACATTTGGTTTCTTCATCTaGTTAAACACAACTTGCTATTCCTGCTTAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAAGKSTFGFFI*LNTTCYSCLSH Trigger: ATGGCTTAAGCAGGAATAGCAAGTTGTGTTTAACAAGATGAAGAAACCAAATGTTGACTTGCCTGCTGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR TCA 90 bp | CACATTTCCTTAATGTATGAACTGTCAGCACTTGCTCATGAGAACTATTATGCAACCCACCGAATTTCTTaGTCCTTTCTTTCTCATCTN | + |
|
Preference number: 4 (lower is better) Translates to: HISLMYELSALAHENYYATHRIS*SFLSHL Trigger: NAGATGAGAAAGAAAGGATCAAGAAATTCGGTGGGT...TGCATAATAGTTCTCATGAGCAAGTGCTGACAGTTCATACATTAAGGAAATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| CDS-3UTR GCA 90 bp | CACATTTCCTTAATGTATGAACTGTCAGCACTTGCTCATGAGAACTATTATGCAGATACTCCTTGTCATTaGAAGTCTGCCATTTACATG | + |
|
Preference number: 4 (lower is better) Translates to: HISLMYELSALAHENYYADTPCH*KSAIYM Trigger: CATGTAAATGGCAGACTTGCAATGACAAGGAGTATC...TGCATAATAGTTCTCATGAGCAAGTGCTGACAGTTCATACATTAAGGAAATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| 3UTR CAA 72 bp | CAGCTGTGTTATGATGCTTACACTGAGCATGTGCAGTaGACCATAATGATGATGAGGATTTATGAAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: QLCYDAYTEHVQ*TIMMMRIYENT Trigger: AGTATTTTCATAAATCCTCATCATCATTATGGTCAACTGCACATGCTCAGTGTAAGCATCATAACACAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS TCA 90 bp | TGGCTGCCCACTTCCATCTGGATCAAACCGAGAACACCTGGCCTCTaGAGTGGAGAAGTAGCAGGCAGGAGTCGCCTGCCTGTGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLPTSIWIKPRTPGL*SGEVAGRSRLPVVL Trigger: CAGGACCACAGGCAGGCGACTCCTGCCTGCTACTTCTCCACTTCAGAGGCCAGGTGTTCTCGGTTTGATCCAGATGGAAGTGGGCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 90 bp | GCCCACTTCCATCTGGATCAAACCGAGAACACCTGGCCTCTGAAGTaGAGAAGTAGCAGGCAGGAGTCGCCTGCCTGTGGTCCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AHFHLDQTENTWPLK*RSSRQESPACGPAG Trigger: TCCTGCAGGACCACAGGCAGGCGACTCCTGCCTGCTACTTCTCCACTTCAGAGGCCAGGTGTTCTCGGTTTGATCCAGATGGAAGTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
||
| CDS CCA 90 bp | AAGTGGCTGGCTGCCCACTTCCATCTGGATCAAACCGAGAACACCTaGCCTCTGAAGTGGAGAAGTAGCAGGCAGGAGTCGCCTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KWLAAHFHLDQTENT*PLKWRSSRQESPAC Trigger: ACAGGCAGGCGACTCCTGCCTGCTACTTCTCCACTTCAGAGGCCAGGTGTTCTCGGTTTGATCCAGATGGAAGTGGGCAGCCAGCCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 90 bp | ACTGGCTACCACCAGTTCAACACCATCTCTCAACAGGGCTACTGTTaGAGTAGTCCCAGAGGTCAGGAGGCTTGCATCTGCAGACAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGYHQFNTISQQGYC*SSPRGQEACICRQV Trigger: CACCTGTCTGCAGATGCAAGCCTCCTGACCTCTGGGACTACTGCAACAGTAGCCCTGTTGAGAGATGGTGTTGAACTGGTGGTAGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 90 bp | GGGCACCACTACTGCAGTGCTGTTGTCTTCGGTACCGTACTGTATTaGCTGCTCAGTCACCGAATGAGCTGCTTCTTTAGGATCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GHHYCSAVVFGTVLY*LLSHRMSCFFRIVA Trigger: TGCCACGATCCTAAAGAAGCAGCTCATTCGGTGACTGAGCAGGCAATACAGTACGGTACCGAAGACAACAGCACTGCAGTAGTGGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 90 bp | CTCATCAATGCGGTTATCCCAGATCCCAAAATTGTCCCAAGTGGCTaGCTGCCCACTTCCATCTGGATCAAACCGAGAACACCTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LINAVIPDPKIVPSG*LPTSIWIKPRTPGL Trigger: GAGGCCAGGTGTTCTCGGTTTGATCCAGATGGAAGTGGGCAGCCAGCCACTTGGGACAATTTTGGGATCTGGGATAACCGCATTGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | ACCGCTTCTTCTCCCATTCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTGGATCGTGGCACTGGTaGACAAAGTCGCAGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TASSPIQLRDAQRLHSCVGSWHW*TKSQIS Trigger: AGAGATCTGCGACTTTGTCAACCAGTGCCACGATCC...AACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGAAGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 90 bp | TCAATGCGGTTATCCCAGATCCCAAAATTGTCCCAAGTGGCTGGCTaGCCACTTCCATCTGGATCAAACCGAGAACACCTGGCCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SMRLSQIPKLSQVAG*PLPSGSNREHLASE Trigger: TTCAGAGGCCAGGTGTTCTCGGTTTGATCCAGATGGAAGTGGGCAGCCAGCCACTTGGGACAATTTTGGGATCTGGGATAACCGCATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 90 bp | TTGGCTCATCAATGCGGTTATCCCAGATCCCAAAATTGTCCCAAGTaGCTGGCTGCCCACTTCCATCTGGATCAAACCGAGAACACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAHQCGYPRSQNCPK*LAAHFHLDQTENTW Trigger: CCAGGTGTTCTCGGTTTGATCCAGATGGAAGTGGGCAGCCAGCCACTTGGGACAATTTTGGGATCTGGGATAACCGCATTGATGAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | CAGCTAAAACACCCTTTGCCGGTGGTGCTGTCCCTAATCCTCTCCTCCCTGGGAAATCTCCGATACTCCTaGTCATTGCAAGTCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QLKHPLPVVLSLILSSLGNLRYS*SLQVCH Trigger: ATGGCAGACTTGCAATGACAAGGAGTATCGGAGATT...TCCCAGGGAGGAGAGGATTAGGGACAGCACCACCGGCAAAGGGTGTTTTAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| CDS-3UTR CAA 90 bp | ACCGCTTCTTCTCCCATTCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTACTACTGCAGTGCTGTaGTCTTCGGTACCGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TASSPIQLRDAQRLHSCVTTAVL*SSVPYC Trigger: ACAGTACGGTACCGAAGACAACAGCACTGCAGTAGT...AACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGAAGCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 90 bp | AGTTCTTGTATTTTCCCCAAGCACCAAAGGGCACCACTACTGCAGTaGTGTTGTCTTCGGTACCGTACTGTATTGCCTGCTCAGTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: SSCIFPKHQRAPLLQ*CCLRYRTVLPAQSP Trigger: CGGTGACTGAGCAGGCAATACAGTACGGTACCGAAGACAACAGCACTGCAGTAGTGGTGCCCTTTGGTGCTTGGGGAAAATACAAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 90 bp | AATGAGAGAGGCACAGCCCACGTTCTCCAGGCTAATTTTGGGAATTaGTTTGCCGTACTTGATGCTAGGTGGCAGCAGAATTGGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: NERGTAHVLQANFGN*FAVLDARWQQNWLI Trigger: GATGAGCCAATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAAATTAGCCTGGAGAACGTGGGCTGTGCCTCTCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | TCTTCTCCCATTCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGATTGGTTTGCCGTACTaGATGCTAGGTGGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSPIQLRDAQRLHSCVMMIGLPY*MLGGSR Trigger: TCTGCTGCCACCTAGCATCAAGTACGGCAAACCAAT...CATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGAATGGGAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 90 bp | TTCAGAGTTCTTGTATTTTCCCCAAGCACCAAAGGGCACCACTACTaGAGTGCTGTTGTCTTCGGTACCGTACTGTATTGCCTGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FRVLVFSPSTKGHHY*SAVVFGTVLYCLLS Trigger: ACTGAGCAGGCAATACAGTACGGTACCGAAGACAACAGCACTGCAGTAGTGGTGCCCTTTGGTGCTTGGGGAAAATACAAGAACTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | GGTCTGTCTGGTTTCCCTTTCATTAAAAGCCTGACCTCAGAGGATCACAGTGATGGATCGTGGCACTGGTaGACAAAGTCGCAGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLSGFPFIKSLTSEDHSDGSWHW*TKSQIS Trigger: AGAGATCTGCGACTTTGTCAACCAGTGCCACGATCC...ATCACTGTGATCCTCTGAGGTCAGGCTTTTAATGAAAGGGAAACCAGACAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| CDS TCA 90 bp | TGGTCCTGCAGGAGGATGGAGCTTAACAACACTCTCTTCTTCACCTaGTTCCCACCACTTCTCAACAAAGTAATGAAGGCCGCTGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: WSCRRMELNNTLFFT*FPPLLNKVMKAADN Trigger: GTTATCAGCGGCCTTCATTACTTTGTTGAGAAGTGGTGGGAATCAGGTGAAGAAGAGAGTGTTGTTAAGCTCCATCCTCCTGCAGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 90 bp | CTCCAGGCTAATTTTGGGAATTGGTTTGCCGTACTTGATGCTAGGTaGCAGCAGAATTGGCTCATCAATGCGGTTATCCCAGATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQANFGNWFAVLDAR*QQNWLINAVIPDPK Trigger: TTTGGGATCTGGGATAACCGCATTGATGAGCCAATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAAATTAGCCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | TGTGGCTCAGGCTACCGTGGAACTTGCTCTGTAGCTCAGGCTAATTTCAAAGTTTCGTTTTCTTTCCGTTaGCCAATGAGAGAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CGSGYRGTCSVAQANFKVSFSFR*PMREAQ Trigger: CTGTGCCTCTCTCATTGGCAAACGGAAAGAAAACGA...AACTTTGAAATTAGCCTGAGCTACAGAGCAAGTTCCACGGTAGCCTGAGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | TCAGCTCAGAGATGCACAGCGGCTTCACAGCTGTGTTATGATGCTTACACTGAGAATCTCCGATACTCCTaGTCATTGCAAGTCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SAQRCTAASQLCYDAYTENLRYS*SLQVCH Trigger: ATGGCAGACTTGCAATGACAAGGAGTATCGGAGATT...CTCAGTGTAAGCATCATAACACAGCTGTGAAGCCGCTGTGCATCTCTGAGCTGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS TCA 90 bp | GCTTCTTTAGGATCGTGGCACTGGTTGACAAAGTCGCAGATCTCTTaGCTATTCACCATGAAGTTAATCCCATCTGTGGTAAGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLGSWHWLTKSQIS*LFTMKLIPSVVRTR Trigger: CCTGGTCCTTACCACAGATGGGATTAACTTCATGGTGAATAGTCAAGAGATCTGCGACTTTGTCAACCAGTGCCACGATCCTAAAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS GCA 90 bp | TACCCCACTGGCTTTAAGATCCAAATCTCCGATACTCCTTGTCATTaGAAGTCTGCCATTTACATGGGGCTGTCCCAAACTATTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YPTGFKIQISDTPCH*KSAIYMGLSQTIPS Trigger: GCTTGGAATAGTTTGGGACAGCCCCATGTAAATGGCAGACTTGCAATGACAAGGAGTATCGGAGATTTGGATCTTAAAGCCAGTGGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS CCA 90 bp | TTTGGGAATTGGTTTGCCGTACTTGATGCTAGGTGGCAGCAGAATTaGCTCATCAATGCGGTTATCCCAGATCCCAAAATTGTCCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FGNWFAVLDARWQQN*LINAVIPDPKIVPS Trigger: ACTTGGGACAATTTTGGGATCTGGGATAACCGCATTGATGAGCCAATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | CAAGTCTGTCTAAACACACACCTACACACTCCTAACCTCACCGCCACCATCAAATTCTCCAGGCTAATTTaGGGAATTGGTTTGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QVCLNTHLHTPNLTATIKFSRLI*GIGLPY Trigger: GTACGGCAAACCAATTCCCAAAATTAGCCTGGAGAA...TTTGATGGTGGCGGTGAGGTTAGGAGTGTGTAGGTGTGTGTTTAGACAGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 90 bp | ACTGTCGTCAGCATGGTAGAGCTTAATCCTTGTTGTCTCAGGTTCTaGAATTACCCCACTGGCTTTAAGATCCAAATCTCCGATACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TVVSMVELNPCCLRF*NYPTGFKIQISDTP Trigger: AGGAGTATCGGAGATTTGGATCTTAAAGCCAGTGGGGTAATTGCAGAACCTGAGACAACAAGGATTAAGCTCTACCATGCTGACGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS CCA 90 bp | TCCAAATCTCCGATACTCCTTGTCATTGCAAGTCTGCCATTTACATaGGGCTGTCCCAAACTATTCCAAGCTACAAACCCACCGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKSPILLVIASLPFT*GCPKLFQATNPPNF Trigger: GAAATTCGGTGGGTTTGTAGCTTGGAATAGTTTGGGACAGCCCCATGTAAATGGCAGACTTGCAATGACAAGGAGTATCGGAGATTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS-3UTR CAA 90 bp | CGTGGAACTTGCTCTGTAGCTCAGGCTAATTTCAAAGTTACCATCCCGATTCTCAACCCACCGAATTTCTaGATCCTTTCTTTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RGTCSVAQANFKVTIPILNPPNF*ILSFSS Trigger: AGATGAGAAAGAAAGGATCAAGAAATTCGGTGGGTT...GAGAATCGGGATGGTAACTTTGAAATTAGCCTGAGCTACAGAGCAAGTTCCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | CACCAATACTGGCCCCCATATTTATTTGTAATCCATAGTGGTTATCTACCAGTAATTTTGGGAATTGGTTaGCCGTACTTGATGCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HQYWPPYLFVIHSGYLPVILGIG*PYLMLG Trigger: ACCTAGCATCAAGTACGGCAAACCAATTCCCAAAAT...TACTGGTAGATAACCACTATGGATTACAAATAAATATGGGGGCCAGTATTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | CACCAATACTGGCCCCCATATTTATTTGTAATCCATAGTGGTTATCTACCAGTACGATACTCCTTGTCATaGCAAGTCTGCCATTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: HQYWPPYLFVIHSGYLPVRYSLS*QVCHLH Trigger: ATGTAAATGGCAGACTTGCAATGACAAGGAGTATCG...TACTGGTAGATAACCACTATGGATTACAAATAAATATGGGGGCCAGTATTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | TACAAGTTCTCCATACTCTTAAAAGTTGTTTTCAAGCCAGGATGTGGTGGCACAAAAGTCGCAGATCTCTaGACTATTCACCATGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YKFSILLKVVFKPGCGGTKVADL*TIHHEV Trigger: AACTTCATGGTGAATAGTCAAGAGATCTGCGACTTT...TGTGCCACCACATCCTGGCTTGAAAACAACTTTTAAGAGTATGGAGAACTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS-3UTR CAA 90 bp | TATGCAATCATGAATCAAATTCACTGTGACACTCCAGCTAAAACACCCTTTGCCAAAGTCGCAGATCTCTaGACTATTCACCATGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YAIMNQIHCDTPAKTPFAKVADL*TIHHEV Trigger: AACTTCATGGTGAATAGTCAAGAGATCTGCGACTTT...GGCAAAGGGTGTTTTAGCTGGAGTGTCACAGTGAATTTGATTCATGATTGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| CDS-3UTR CAA 90 bp | ATTTCCTTAATGTATGAACTGTCAGCACTTGCTCATGAGAACTATTATGCAATCCGATACTCCTTGTCATaGCAAGTCTGCCATTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: ISLMYELSALAHENYYAIRYSLS*QVCHLH Trigger: ATGTAAATGGCAGACTTGCAATGACAAGGAGTATCG...GATTGCATAATAGTTCTCATGAGCAAGTGCTGACAGTTCATACATTAAGGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204607.2 |
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| CDS GCA 72 bp | GGCTACTGTTGCAGTAGTCCCAGAGGTCAGGAGGCTTaGATCTGCAGACAGGTGGGCATAACTCGCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GYCCSSPRGQEA*ICRQVGITREG Trigger: GCCTTCGCGAGTTATGCCCACCTGTCTGCAGATGCAAGCCTCCTGACCTCTGGGACTACTGCAACAGTAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS TCA 72 bp | ACTTCCATCTGGATCAAACCGAGAACACCTGGCCTCTaGAGTGGAGAAGTAGCAGGCAGGAGTCGCCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TSIWIKPRTPGL*SGEVAGRSRLP Trigger: AGGCAGGCGACTCCTGCCTGCTACTTCTCCACTTCAGAGGCCAGGTGTTCTCGGTTTGATCCAGATGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 72 bp | AGGCAGGAGTCGCCTGCCTGTGGTCCTGCAGGAGGATaGAGCTTAACAACACTCTCTTCTTCACCTGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQESPACGPAGG*SLTTLSSSPDS Trigger: GGAATCAGGTGAAGAAGAGAGTGTTGTTAAGCTCCATCCTCCTGCAGGACCACAGGCAGGCGACTCCTGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 72 bp | CCCCAAGCACCAAAGGGCACCACTACTGCAGTGCTGTaGTCTTCGGTACCGTACTGTATTGCCTGCTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PQAPKGTTTAVL*SSVPYCIACSV Trigger: GACTGAGCAGGCAATACAGTACGGTACCGAAGACAACAGCACTGCAGTAGTGGTGCCCTTTGGTGCTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 72 bp | CACCAGTTCAACACCATCTCTCAACAGGGCTACTGTTaGAGTAGTCCCAGAGGTCAGGAGGCTTGCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HQFNTISQQGYC*SSPRGQEACIC Trigger: GCAGATGCAAGCCTCCTGACCTCTGGGACTACTGCAACAGTAGCCCTGTTGAGAGATGGTGTTGAACTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 72 bp | ACATTTCTCCATGTGTGTGTGACAGAAGTCAGCGGCTaGAGGGCCCCCATGTCCATCATAGACTGCGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: TFLHVCVTEVSG*RAPMSIIDCEV Trigger: TACTTCGCAGTCTATGATGGACATGGGGGCCCTGCAGCCGCTGACTTCTGTCACACACACATGGAGAAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 90 bp | GGCAGCAGAATTGGCTCATCAATGCGGTTATCCCAGATCCCAAAATaGTCCCAAGTGGCTGGCTGCCCACTTCCATCTGGATCAAACCGA | + |
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Preference number: 6 (lower is better) Translates to: GSRIGSSMRLSQIPK*SQVAGCPLPSGSNR Trigger: TCGGTTTGATCCAGATGGAAGTGGGCAGCCAGCCACTTGGGACAATTTTGGGATCTGGGATAACCGCATTGATGAGCCAATTCTGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS TCA 72 bp | TCGGTACCGTACTGTATTGCCTGCTCAGTCACCGAATaGGCTGCTTCTTTAGGATCGTGGCACTGGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: SVPYCIACSVTE*AASLGSWHWLT Trigger: TGTCAACCAGTGCCACGATCCTAAAGAAGCAGCTCATTCGGTGACTGAGCAGGCAATACAGTACGGTACCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 72 bp | TTATCCCAGATCCCAAAATTGTCCCAAGTGGCTGGCTaGCCACTTCCATCTGGATCAAACCGAGAACACCTG | + |
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Preference number: 6 (lower is better) Translates to: LSQIPKLSQVAG*PLPSGSNREHL Trigger: CAGGTGTTCTCGGTTTGATCCAGATGGAAGTGGGCAGCCAGCCACTTGGGACAATTTTGGGATCTGGGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 72 bp | ATTTTCCCCAAGCACCAAAGGGCACCACTACTGCAGTaGTGTTGTCTTCGGTACCGTACTGTATTGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: IFPKHQRAPLLQ*CCLRYRTVLPA Trigger: AGCAGGCAATACAGTACGGTACCGAAGACAACAGCACTGCAGTAGTGGTGCCCTTTGGTGCTTGGGGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 72 bp | GGCACAGCCCACGTTCTCCAGGCTAATTTTGGGAATTaGTTTGCCGTACTTGATGCTAGGTGGCAGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: GTAHVLQANFGN*FAVLDARWQQN Trigger: ATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAAATTAGCCTGGAGAACGTGGGCTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 72 bp | CTTTTCTACACAAAAGAGCCCGGCTGTCTCCAACACTaGCTACCACCAGTTCAACACCATCTCTCAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: LFYTKEPGCLQH*LPPVQHHLSTG Trigger: CCCTGTTGAGAGATGGTGTTGAACTGGTGGTAGCCAGTGTTGGAGACAGCCGGGCTCTTTTGTGTAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 72 bp | ATTGGCTCATCAATGCGGTTATCCCAGATCCCAAAATaGTCCCAAGTGGCTGGCTGCCCACTTCCATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: IGSSMRLSQIPK*SQVAGCPLPSG Trigger: TCCAGATGGAAGTGGGCAGCCAGCCACTTGGGACAATTTTGGGATCTGGGATAACCGCATTGATGAGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 72 bp | CAGCCCACGTTCTCCAGGCTAATTTTGGGAATTGGTTaGCCGTACTTGATGCTAGGTGGCAGCAGAATTGGC | + |
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Preference number: 6 (lower is better) Translates to: QPTFSRLILGIG*PYLMLGGSRIG Trigger: GCCAATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAAATTAGCCTGGAGAACGTGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 90 bp | CAGCCCACGTTCTCCAGGCTAATTTTGGGAATTGGTTTGCCGTACTaGATGCTAGGTGGCAGCAGAATTGGCTCATCAATGCGGTTATCC | + |
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Preference number: 6 (lower is better) Translates to: QPTFSRLILGIGLPY*MLGGSRIGSSMRLS Trigger: GGATAACCGCATTGATGAGCCAATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAAATTAGCCTGGAGAACGTGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 90 bp | AGAGAGGCACAGCCCACGTTCTCCAGGCTAATTTTGGGAATTGGTTaGCCGTACTTGATGCTAGGTGGCAGCAGAATTGGCTCATCAATG | + |
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Preference number: 6 (lower is better) Translates to: REAQPTFSRLILGIG*PYLMLGGSRIGSSM Trigger: CATTGATGAGCCAATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAAATTAGCCTGGAGAACGTGGGCTGTGCCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 90 bp | CGTTTGCCAATGAGAGAGGCACAGCCCACGTTCTCCAGGCTAATTTaGGGAATTGGTTTGCCGTACTTGATGCTAGGTGGCAGCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: RLPMREAQPTFSRLI*GIGLPYLMLGGSRI Trigger: AATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAAATTAGCCTGGAGAACGTGGGCTGTGCCTCTCTCATTGGCAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 72 bp | ACCGTACTGTATTGCCTGCTCAGTCACCGAATGAGCTaGTTCTTTAGGATCGTGGCACTGGTTGACAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: TVLYCLLSHRMS*FFRIVALVDKV Trigger: GACTTTGTCAACCAGTGCCACGATCCTAAAGAAGCAGCTCATTCGGTGACTGAGCAGGCAATACAGTACGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 72 bp | TACTGCAGTGCTGTTGTCTTCGGTACCGTACTGTATTaGCTGCTCAGTCACCGAATGAGCTGCTTCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: YCSAVVFGTVLY*LLSHRMSCFFR Trigger: CCTAAAGAAGCAGCTCATTCGGTGACTGAGCAGGCAATACAGTACGGTACCGAAGACAACAGCACTGCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS GCA 72 bp | CTTGTATTTTCCCCAAGCACCAAAGGGCACCACTACTaGAGTGCTGTTGTCTTCGGTACCGTACTGTATTGC | + |
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Preference number: 6 (lower is better) Translates to: LVFSPSTKGHHY*SAVVFGTVLYC Trigger: GCAATACAGTACGGTACCGAAGACAACAGCACTGCAGTAGTGGTGCCCTTTGGTGCTTGGGGAAAATACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 72 bp | TGTGCAAACCCAAATCGATCTTCGTTTTCTTTCCGTTaGCCAATGAGAGAGGCACAGCCCACGTTCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CANPNRSSFSFR*PMREAQPTFSR Trigger: CCTGGAGAACGTGGGCTGTGCCTCTCTCATTGGCAAACGGAAAGAAAACGAAGATCGATTTGGGTTTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 90 bp | TCTGTCAGCTGTGCAAACCCAAATCGATCTTCGTTTTCTTTCCGTTaGCCAATGAGAGAGGCACAGCCCACGTTCTCCAGGCTAATTTTG | + |
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Preference number: 6 (lower is better) Translates to: SVSCANPNRSSFSFR*PMREAQPTFSRLIL Trigger: CAAAATTAGCCTGGAGAACGTGGGCTGTGCCTCTCTCATTGGCAAACGGAAAGAAAACGAAGATCGATTTGGGTTTGCACAGCTGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CCA 72 bp | TGGTTTGCCGTACTTGATGCTAGGTGGCAGCAGAATTaGCTCATCAATGCGGTTATCCCAGATCCCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: WFAVLDARWQQN*LINAVIPDPKI Trigger: AATTTTGGGATCTGGGATAACCGCATTGATGAGCCAATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 90 bp | TGCTTCTTTAGGATCGTGGCACTGGTTGACAAAGTCGCAGATCTCTaGACTATTCACCATGAAGTTAATCCCATCTGTGGTAAGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: CFFRIVALVDKVADL*TIHHEVNPICGKDQ Trigger: CTGGTCCTTACCACAGATGGGATTAACTTCATGGTGAATAGTCAAGAGATCTGCGACTTTGTCAACCAGTGCCACGATCCTAAAGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS TCA 72 bp | AGGAGGATGGAGCTTAACAACACTCTCTTCTTCACCTaGTTCCCACCACTTCTCAACAAAGTAATGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRMELNNTLFFT*FPPLLNKVMKA Trigger: GGCCTTCATTACTTTGTTGAGAAGTGGTGGGAATCAGGTGAAGAAGAGAGTGTTGTTAAGCTCCATCCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS TCA 72 bp | GGATCGTGGCACTGGTTGACAAAGTCGCAGATCTCTTaGCTATTCACCATGAAGTTAATCCCATCTGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: GSWHWLTKSQIS*LFTMKLIPSVV Trigger: TACCACAGATGGGATTAACTTCATGGTGAATAGTCAAGAGATCTGCGACTTTGTCAACCAGTGCCACGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS GCA 72 bp | GATCCAAATCTCCGATACTCCTTGTCATTGCAAGTCTaGCATTTACATGGGGCTGTCCCAAACTATTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: DPNLRYSLSLQV*HLHGAVPNYSK Trigger: CTTGGAATAGTTTGGGACAGCCCCATGTAAATGGCAGACTTGCAATGACAAGGAGTATCGGAGATTTGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS GCA 72 bp | GGCTTTAAGATCCAAATCTCCGATACTCCTTGTCATTaGAAGTCTGCCATTTACATGGGGCTGTCCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: GFKIQISDTPCH*KSAIYMGLSQT Trigger: AGTTTGGGACAGCCCCATGTAAATGGCAGACTTGCAATGACAAGGAGTATCGGAGATTTGGATCTTAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS CAA 72 bp | TTCTCCAGGCTAATTTTGGGAATTGGTTTGCCGTACTaGATGCTAGGTGGCAGCAGAATTGGCTCATCAATG | + |
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Preference number: 6 (lower is better) Translates to: FSRLILGIGLPY*MLGGSRIGSSM Trigger: CATTGATGAGCCAATTCTGCTGCCACCTAGCATCAAGTACGGCAAACCAATTCCCAAAATTAGCCTGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042766.6 |
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| CDS CAA 72 bp | AGGATCGTGGCACTGGTTGACAAAGTCGCAGATCTCTaGACTATTCACCATGAAGTTAATCCCATCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: RIVALVDKVADL*TIHHEVNPICG Trigger: ACCACAGATGGGATTAACTTCATGGTGAATAGTCAAGAGATCTGCGACTTTGTCAACCAGTGCCACGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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| CDS GCA 72 bp | AGCATGGTAGAGCTTAATCCTTGTTGTCTCAGGTTCTaGAATTACCCCACTGGCTTTAAGATCCAAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SMVELNPCCLRF*NYPTGFKIQIS Trigger: GGAGATTTGGATCTTAAAGCCAGTGGGGTAATTGCAGAACCTGAGACAACAAGGATTAAGCTCTACCATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042766.6 ENSMUST00000204607.2 |
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