Pregenerated sensors for PPM1J (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002228Ensembl transcript IDs: ENSMUST00000002298.7
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATaGCCACTCTCGAGTCAGGGACACAACTTCCGTGTTTGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: PVAVILDLAGIPLFK*PLSSQGHNFRVWAG Trigger: TCCTGCCCAAACACGGAAGTTGTGTCCCTGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| 3UTR CAA 90 bp | GTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTaGTTCAAATGGCCACTCTCGAGTCAGGGACACAACTTCCGTGTT | + |
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Preference number: 2 (lower is better) Translates to: VYLPVAVILDLAGIP*FKWPLSSQGHNFRV Trigger: AACACGGAAGTTGTGTCCCTGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| 3UTR-3UTR CAA 90 bp | CATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGGAGGCTGGGGTGGCATaGAGAGGGATGGGGCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: HLVYLPVAVILDLAGIPLEAGVA*RGMGLS Trigger: GCTCAGCCCCATCCCTCTCAATGCCACCCCAGCCTC...CAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| 3UTR CCA 72 bp | GTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATaGCCACTCTCGAGTCAGGGACACAACTTCCGTGTT | + |
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Preference number: 3 (lower is better) Translates to: VILDLAGIPLFK*PLSSQGHNFRV Trigger: AACACGGAAGTTGTGTCCCTGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATGCGGCGGCCGGTGTCTaGGGGGCTTTGCACAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QLPCLGRRRVIVERLGWHAAAGV*GALHSP Trigger: CGGGCTGTGCAAAGCCCCCCAGACACCGGCCGCCGC...ATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | ACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATTGCCCGAGCTCACCAGGTaGGCCACGGCTGAGCGCACC | + |
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Preference number: 4 (lower is better) Translates to: TSVFGQEKGDSGEAGVALPELTR*ATAERT Trigger: GGTGCGCTCAGCCGTGGCGCACCTGGTGAGCTCGGG...CAATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR TCA 90 bp | CAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATGCCCGCCCAGGGGGATaGCGAAGACCGAGATGTCAT | + |
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Preference number: 4 (lower is better) Translates to: QLPCLGRRRVIVERLGWHARPGG*RRPRCH Trigger: ATGACATCTCGGTCTTCGTCATCCCCCTGGGCGGGC...ATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | GACACAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGGAGGCCATTTCAGCTaGTCCTCCACCAGCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DTTSVFGQEKGDSGEAGVGGHFS*SSTSVP Trigger: GGGCACGCTGGTGGAGGAGCAGCTGAAATGGCCTCC...CACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATAGCTGTTCCCGGATGTaGCGATGCAGGAGCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QLPCLGRRRVIVERLGWHSCSRM*RCRSRE Trigger: CTCCCGGCTCCTGCATCGCCACATCCGGGAACAGCT...ATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATGGTTCCAGGAGTGGATaGGAGACAGAGGGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: QLPCLGRRRVIVERLGWHGSRSG*ETEGRR Trigger: CCGCCTCCCCTCTGTCTCCCATCCACTCCTGGAACC...ATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR TCA 90 bp | CAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATAGGGCTAACCAACTGTaGAGGACTGGGGGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QLPCLGRRRVIVERLGWHRANQL*RTGGSW Trigger: CCAGGAGCCCCCAGTCCTTCACAGTTGGTTAGCCCT...ATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | GACACAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGAGCGCTGGGAAGAAGTaGCACCCGAGCTCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: DTTSVFGQEKGDSGEAGVSAGKK*HPSSPG Trigger: ACCTGGTGAGCTCGGGTGGCACTTCTTCCCAGCGCT...CACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | GACACAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGACCCAGCTTGTTGTTTaGGAGACGCCAGCCACGGTC | + |
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Preference number: 4 (lower is better) Translates to: DTTSVFGQEKGDSGEAGVTQLVV*ETPATV Trigger: GACCGTGGCTGGCGTCTCCCAAACAACAAGCTGGGT...CACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| 3UTR CAA 72 bp | ATGGCCACTCTCGAGTCAGGGACACAACTTCCGTGTTaGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: MATLESGTQLPC*GRRRVIVERLG Trigger: CCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTGTGTCCCTGACTCGAGAGTGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATCGGGGAAATTCAAGGTaGGTGAACTCACTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QLPCLGRRRVIVERLGWHRGNSR*VNSLPS Trigger: GCTGGGCAGTGAGTTCACCCACCTTGAATTTCCCCG...ATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | CATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTGCACAGCCCGGCCTaGGTGGTCGTCGGCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: HLVYLPVAVILDLAGIPLLHSPA*VVVGAP Trigger: CGGCGCGCCGACGACCACGCAGGCCGGGCTGTGCAA...CAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | TTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACCTCGGCATAGCCTGTaGTCCAGGGCAGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LPVAVILDLAGIPLFKWPPRHSL*SRAGGG Trigger: GCCGCCGCCTGCCCTGGAGCACAGGCTATGCCGAGG...TGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | TTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCATGGGGCGCGCCGACCTaGTTCCCAGGCTTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LPVAVILDLAGIPLFKWPWGAPT*FPGFSR Trigger: CCGGGAGAAGCCTGGGAACCAGGTCGGCGCGCCCCA...TGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCCCCCCTTCCACTTGGTaGCCACGCCGCTCCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SCCNFGSSRHPFVQMATLPPSTW*PRRSRA Trigger: GGCTCGGGAGCGGCGTGGCCACCAAGTGGAAGGGGG...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR TCA 90 bp | ACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATTGGAAATTCAAGGTGGGTaGACTCACTGCCCAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: TSVFGQEKGDSGEAGVALEIQGG*THCPAV Trigger: AACTGCTGGGCAGTGAGTTCACCCACCTTGAATTTC...CAATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | GTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGGGAGTAACTGCTGCCTaGCCCGCCCAGGGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: VAVILDLAGIPLFKWPLSGVTAA*PAQGDD Trigger: GTCATCCCCCTGGGCGGGCCAGGCAGCAGTTACTCC...CGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | CCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCGCTCCTCCACCAGCGTaGCCATCAAACAGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PVAVILDLAGIPLFKWPLAPPPA*PSNRPQ Trigger: CTGGGGCCTGTTTGATGGGCACGCTGGTGGAGGAGC...GAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCCAGCCCCCTTCCACTTaGTGGCCACGCCGCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: LVYLPVAVILDLAGIPLFQPPST*WPRRSR Trigger: TCGGGAGCGGCGTGGCCACCAAGTGGAAGGGGGCTG...GAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | TGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGAGTCACCTCCGGGGCTCAGCTaGAGAAAGGTGGGTCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: CNFGSSRHPFVQMATLESPPGLS*RKVGRE Trigger: CTCTCGACCCACCTTTCTGCAGCTGAGCCCCGGAGG...TGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGAGTCAAGGACTGGGGGCTCCTaGGGTTCCAGGAGTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: CNFGSSRHPFVQMATLESRTGGS*GSRSGW Trigger: CCATCCACTCCTGGAACCCCAGGAGCCCCCAGTCCT...TGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR TCA 90 bp | GCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTACCTCGCAGCAAGCCTaGTCCTCATTGTGCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASCCNFGSSRHPFVQMATTSQQA*SSLCLL Trigger: GAGCAGGCACAATGAGGATCAGGCTTGCTGCGAGGT...AGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR TCA 90 bp | CATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGAGGAAGCCAAGCAGCTaGAGACGCTGGCGCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: HLVYLPVAVILDLAGIPLRKPSS*RRWRSV Trigger: GACGGAGCGCCAGCGTCTTCAGCTGCTTGGCTTCCT...CAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCAGCGTTGGGCAGATCTaGGGACTTGGAGCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SCCNFGSSRHPFVQMATLSVGQI*GLGALG Trigger: TCCCAGCGCTCCAAGTCCCCAGATCTGCCCAACGCT...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCCTCTTAGGTGTTTCTTaGGCGGCGGGAGGCGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SCCNFGSSRHPFVQMATLLLGVS*AAGGAE Trigger: CTCAGCGCCTCCCGCCGCCCAAGAAACACCTAAGAG...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCCTGGCGCTCCGTCTCTaGTGTGAACTCCCGGGACAT | + |
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Preference number: 4 (lower is better) Translates to: SCCNFGSSRHPFVQMATLLALRL*CELPGH Trigger: ATGTCCCGGGAGTTCACACCAGAGACGGAGCGCCAG...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR TCA 90 bp | CCATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGCTCCGTCTCTGGTGTaGACTCCCGGGACATCGGAA | + |
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Preference number: 4 (lower is better) Translates to: PSGLFASCCNFGSSRHPFAPSLV*TPGTSE Trigger: TTCCGATGTCCCGGGAGTTCACACCAGAGACGGAGC...AAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | CCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCCGCTCCCGAGCCATCTaGTCATCCATGAGATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PVAVILDLAGIPLFKWPLRSRAI*SSMRWK Trigger: CTTCCATCTCATGGATGAGCAGATGGCTCGGGAGCG...GAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | TTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACAGAAGCCCTGGTTATaGCTAGGCTCCCTGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: LPVAVILDLAGIPLFKWPQKPWL*LGSLET Trigger: GGTCTCCAGGGAGCCTAGCCATAACCAGGGCTTCTG...TGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGCCAACTGTGAAGGACTaGGGGCTCCTGGGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HLVYLPVAVILDLAGIPLPTVKD*GLLGFQ Trigger: CTGGAACCCCAGGAGCCCCCAGTCCTTCACAGTTGG...CAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCCAGACCTTAAGGTTGTaGTCTCCCAAGCCCCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PVAVILDLAGIPLFKWPLQTLRL*SPKPRV Trigger: GACACGGGGCTTGGGAGACCACAACCTTAAGGTCTG...GAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGAGTCACCCAGGACCAGAGCTTaGGCCAGAGCTGTATACCTG | + |
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Preference number: 4 (lower is better) Translates to: CNFGSSRHPFVQMATLESPRTRA*ARAVYL Trigger: CAGGTATACAGCTCTGGCCCAAGCTCTGGTCCTGGG...TGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCGCAGATCTGGGGACTTaGAGCGCTGGGAAGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LVYLPVAVILDLAGIPLFADLGT*SAGKKC Trigger: GCACTTCTTCCCAGCGCTCCAAGTCCCCAGATCTGC...GAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGCACCCTGTCCACAGTaGCAGCTACCTCAGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SCCNFGSSRHPFVQMATLAPCPQ*QLPQSH Trigger: ATGACTCTGAGGTAGCTGCCACTGTGGACAGGGTGC...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| 3UTR CAA 72 bp | CCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTaGTTCAAATGGCCACTCTCGAGTCAGGGACACAAC | + |
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Preference number: 4 (lower is better) Translates to: PVAVILDLAGIP*FKWPLSSQGHN Trigger: GTTGTGTCCCTGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGGCCCTGCTGTCACCTaGGTTAGCCACATACATCTT | + |
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Preference number: 4 (lower is better) Translates to: SCCNFGSSRHPFVQMATLGPAVT*VSHIHL Trigger: AAGATGTATGTGGCTAACGCAGGTGACAGCAGGGCC...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | TTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCATCAGCTGCAGAAAGGTaGGTCGAGAGAAGCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: LPVAVILDLAGIPLFKWPSAAER*VERSSQ Trigger: CTGTGAGCTTCTCTCGACCCACCTTTCTGCAGCTGA...TGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGGTCACTTCCTTCTGTaGAGACCAGCAGGATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SCCNFGSSRHPFVQMATLGHFLL*RPAGLR Trigger: CCTCAATCCTGCTGGTCTCCACAGAAGGAAGTGACC...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCACTGCCCAGCAGTTCTaGTTTCAGGAAGCCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SCCNFGSSRHPFVQMATLTAQQF*FQEAKQ Trigger: CTGCTTGGCTTCCTGAAACCAGAACTGCTGGGCAGT...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | CCATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTTCTGCCCTAGTTCCTTaGGCTGAACTCTTCGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PSGLFASCCNFGSSRHPFSALVP*AELFGE Trigger: TTCCCCGAAGAGTTCAGCCCAAGGAACTAGGGCAGA...AAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGAGTCACAGCCAGTCATATTCTaGTCCCTGTACAGCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: CNFGSSRHPFVQMATLESQPVIF*SLYSIL Trigger: GAGGATGCTGTACAGGGACCAGAATATGACTGGCTG...TGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR TCA 90 bp | TATCCATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCAGACCAGAGGAAACCTaGGATCCTCCACCTCAATCT | + |
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Preference number: 4 (lower is better) Translates to: YPSGLFASCCNFGSSRHPRPEET*DPPPQS Trigger: AGATTGAGGTGGAGGATCTCAGGTTTCCTCTGGTCT...GGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS-3UTR GCA 90 bp | TTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCAGGACAGTGCTCATACTaGGTCAGATCATACACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPVAVILDLAGIPLFKWPGQCSY*VRSYTR Trigger: ACGAGTGTATGATCTGACGCAGTATGAGCACTGTCC...TGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CCA 90 bp | TTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCAGGAAGGCATTCTCAATaGCTCCTACTATCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPVAVILDLAGIPLFKWPGRHSQ*LLLSGC Trigger: ACAGCCTGATAGTAGGAGCCATTGAGAATGCCTTCC...TGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CCA 90 bp | CATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGGACCAGCACATCATCTaGACAGTGCTCATACTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HLVYLPVAVILDLAGIPLDQHII*TVLILR Trigger: ACGCAGTATGAGCACTGTCCAGATGATGTGCTGGTC...CAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CCA 90 bp | CCATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTACCTGCTGGGATCATTaGGCTCATAGGATGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGLFASCCNFGSSRHPFTCWDH*AHRMTA Trigger: TGCTGTCATCCTATGAGCCCAATGATCCCAGCAGGT...AAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CCA 90 bp | CTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCACTATCAGGCTGTCATaGGTCACTTCCTTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVYLPVAVILDLAGIPLFTIRLS*VTSFCG Trigger: TCCACAGAAGGAAGTGACCCATGACAGCCTGATAGT...GAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR GCA 90 bp | CTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCACATCATCTGGACAGTaGTCATACTGCGTCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LVYLPVAVILDLAGIPLFTSSGQ*SYCVRS Trigger: TGATCTGACGCAGTATGAGCACTGTCCAGATGATGT...GAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CCA 90 bp | CCATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTTGCTCATCCATGAGATaGAAGGCATTCTCAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGLFASCCNFGSSRHPFCSSMR*KAFSMA Trigger: AGCCATTGAGAATGCCTTCCATCTCATGGATGAGCA...AAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 90 bp | GACCTCGGCATAGCCTGTGCTCCAGGGCAGGCGGCGGCCGGTGTCTaGGGGGCTTTGCACAGCCCGGCCTGCGTGGTCGTCGGCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DLGIACAPGQAAAGV*GALHSPACVVVGAP Trigger: CGGCGCGCCGACGACCACGCAGGCCGGGCTGTGCAAAGCCCCCCAGACACCGGCCGCCGCCTGCCCTGGAGCACAGGCTATGCCGAGGTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS GCA 90 bp | CGGCCTGCGTGGTCGTCGGCGCGCCGCAGCCCTCCGGGGCTCAGCTaGAGAAAGGTGGGTCGAGAGAAGCTCACAGTAGTCTCCGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPAWSSARRSPPGLS*RKVGREKLTVVSAV Trigger: GACCGCGGAGACTACTGTGAGCTTCTCTCGACCCACCTTTCTGCAGCTGAGCCCCGGAGGGCTGCGGCGCGCCGACGACCACGCAGGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 90 bp | CCGACCTGGTTCCCAGGCTTCTCCCGGGAACTCTTAGGTGTTTCTTaGGCGGCGGGAGGCGCTGAGGTAGCGTTGGGCAGATCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PTWFPGFSRELLGVS*AAGGAEVALGRSGD Trigger: GTCCCCAGATCTGCCCAACGCTACCTCAGCGCCTCCCGCCGCCCAAGAAACACCTAAGAGTTCCCGGGAGAAGCCTGGGAACCAGGTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS TCA 90 bp | CTTCTCCCGGGAACTCTTAGGTGTTTCTTGGGCGGCGGGAGGCGCTaGGGTAGCGTTGGGCAGATCTGGGGACTTGGAGCGCTGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLPGTLRCFLGGGRR*GSVGQIWGLGALGR Trigger: TCTTCCCAGCGCTCCAAGTCCCCAGATCTGCCCAACGCTACCTCAGCGCCTCCCGCCGCCCAAGAAACACCTAAGAGTTCCCGGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 90 bp | CCTAGCAGGTACAGCACCACTAGTGCACAGCAGCCCCCTTCCACTTaGTGGCCACGCCGCTCCCGAGCCATCTGCTCATCCATGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSRYSTTSAQQPPST*WPRRSRAICSSMRW Trigger: CCATCTCATGGATGAGCAGATGGCTCGGGAGCGGCGTGGCCACCAAGTGGAAGGGGGCTGCTGTGCACTAGTGGTGCTGTACCTGCTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 90 bp | AGCAGGTACAGCACCACTAGTGCACAGCAGCCCCCTTCCACTTGGTaGCCACGCCGCTCCCGAGCCATCTGCTCATCCATGAGATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRYSTTSAQQPPSTW*PRRSRAICSSMRWK Trigger: CTTCCATCTCATGGATGAGCAGATGGCTCGGGAGCGGCGTGGCCACCAAGTGGAAGGGGGCTGCTGTGCACTAGTGGTGCTGTACCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS GCA 90 bp | CTGTTCCCGGATGTGGCGATGCAGGAGCCGGGAGGCCATTTCAGCTaGTCCTCCACCAGCGTGCCCATCAAACAGGCCCCAGTAGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFPDVAMQEPGGHFS*SSTSVPIKQAPVVK Trigger: TTTTACTACTGGGGCCTGTTTGATGGGCACGCTGGTGGAGGAGCAGCTGAAATGGCCTCCCGGCTCCTGCATCGCCACATCCGGGAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CAA 90 bp | CAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGGCATCCCCAGGACCAGAGCTaGGGCCAGAGCTGTATACCT | + |
|
Preference number: 5 (lower is better) Translates to: QLPCLGRRRVIVERLGWHPQDQS*GQSCIP Trigger: AGGTATACAGCTCTGGCCCAAGCTCTGGTCCTGGGG...ATGCCACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS TCA 90 bp | CACTTCCTTCTGTGGAGACCAGCAGGATTGAGGGCTAACCAACTGTaGAGGACTGGGGGCTCCTGGGGTTCCAGGAGTGGATGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HFLLWRPAGLRANQL*RTGGSWGSRSGWET Trigger: TGTCTCCCATCCACTCCTGGAACCCCAGGAGCCCCCAGTCCTTCACAGTTGGTTAGCCCTCAATCCTGCTGGTCTCCACAGAAGGAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CAA 90 bp | GACACAACTTCCGTGTTTGGGCAGGAGAAGGGTGATAGTGGAGAGGCTGGGGTGCTGCAGACCTTAAGGTaGTGGTCTCCCAAGCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: DTTSVFGQEKGDSGEAGVLQTLR*WSPKPR Trigger: ACGGGGCTTGGGAGACCACAACCTTAAGGTCTGCAG...CACCCCAGCCTCTCCACTATCACCCTTCTCCTGCCCAAACACGGAAGTTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS TCA 90 bp | CTCCTGCTCCTCCGACTTTCCACATACACAACCTCGCAGCAAGCCTaGTCCTCATTGTGCCTGCTCTTGCCAGCATTGATGACCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLRLSTYTTSQQA*SSLCLLLPALMTSA Trigger: TGCCGAGGTCATCAATGCTGGCAAGAGCAGGCACAATGAGGATCAGGCTTGCTGCGAGGTTGTGTATGTGGAAAGTCGGAGGAGCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS GCA 90 bp | TTAAGTATTTCTACTAGATCCTTGAGCTGTTCCCGGATGTGGCGATaGAGGAGCCGGGAGGCCATTTCAGCTGCTCCTCCACCAGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSISTRSLSCSRMWR*RSREAISAAPPPAC Trigger: GCACGCTGGTGGAGGAGCAGCTGAAATGGCCTCCCGGCTCCTGCATCGCCACATCCGGGAACAGCTCAAGGATCTAGTAGAAATACTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CAA 90 bp | CCATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGCAGCCCCCTTCCACTaGGTGGCCACGCCGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSGLFASCCNFGSSRHPFAAPFH*VATPLP Trigger: CGGGAGCGGCGTGGCCACCAAGTGGAAGGGGGCTGC...AAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS TCA 90 bp | GCCCTAGTTCCTTGGGCTGAACTCTTCGGGGAAATTCAAGGTGGGTaGACTCACTGCCCAGCAGTTCTGGTTTCAGGAAGCCAAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALVPWAELFGEIQGG*THCPAVLVSGSQAA Trigger: AGCTGCTTGGCTTCCTGAAACCAGAACTGCTGGGCAGTGAGTTCACCCACCTTGAATTTCCCCGAAGAGTTCAGCCCAAGGAACTAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 90 bp | GGATCCTTAAGTATTTCTACTAGATCCTTGAGCTGTTCCCGGATGTaGCGATGCAGGAGCCGGGAGGCCATTTCAGCTGCTCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GSLSISTRSLSCSRM*RCRSREAISAAPPP Trigger: TGGTGGAGGAGCAGCTGAAATGGCCTCCCGGCTCCTGCATCGCCACATCCGGGAACAGCTCAAGGATCTAGTAGAAATACTTAAGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 90 bp | TGCTGGGATCATTGGGCTCATAGGATGACAGCACCCTGTCCACAGTaGCAGCTACCTCAGAGTCATTGGTCACATCCCACAAGCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: CWDHWAHRMTAPCPQ*QLPQSHWSHPTSHL Trigger: CAGATGGCTTGTGGGATGTGACCAATGACTCTGAGGTAGCTGCCACTGTGGACAGGGTGCTGTCATCCTATGAGCCCAATGATCCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 90 bp | GGTCACATCCCACAAGCCATCTGTTCCCAGGACCAGCACATCATCTaGACAGTGCTCATACTGCGTCAGATCATACACTCGTACTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GHIPQAICSQDQHII*TVLILRQIIHSYFR Trigger: CCTGAAGTACGAGTGTATGATCTGACGCAGTATGAGCACTGTCCAGATGATGTGCTGGTCCTGGGAACAGATGGCTTGTGGGATGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS GCA 90 bp | TCCCACAAGCCATCTGTTCCCAGGACCAGCACATCATCTGGACAGTaGTCATACTGCGTCAGATCATACACTCGTACTTCAGGAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SHKPSVPRTSTSSGQ*SYCVRSYTRTSGKQ Trigger: CTGCTTTCCTGAAGTACGAGTGTATGATCTGACGCAGTATGAGCACTGTCCAGATGATGTGCTGGTCCTGGGAACAGATGGCTTGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCATCCCCGGAACCCAGCTaGTTGTTTGGGAGACGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPVAVILDLAGIPLFKWPSPEPS*LFGRRQ Trigger: CTGGCGTCTCCCAAACAACAAGCTGGGTTCCGGGGA...TGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CAA 90 bp | TGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCGAGTCAAACCCAGCTTGTTGTTaGGGAGACGCCAGCCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: CNFGSSRHPFVQMATLESNPACC*GDASHG Trigger: ACCGTGGCTGGCGTCTCCCAAACAACAAGCTGGGTT...TGACTCGAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCCCGGAACCCAGCTTGTaGTTTGGGAGACGCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVYLPVAVILDLAGIPLFPEPSL*FGRRQP Trigger: TGGCTGGCGTCTCCCAAACAACAAGCTGGGTTCCGG...GAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CAA 90 bp | TATCCATCTGGTTTATTTGCCAGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTCATTGTGCCTGCTCTaGCCAGCATTGATGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: YPSGLFASCCNFGSSRHPSLCLL*PALMTS Trigger: CGAGGTCATCAATGCTGGCAAGAGCAGGCACAATGA...GGGATGCCTGCTAGATCCAAAATTACAGCAACTGGCAAATAAACCAGATGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS-3UTR CAA 90 bp | AGTTGCTGTAATTTTGGATCTAGCAGGCATCCCTTTGTTCAAATGGCCACTCTCTTAGCCACATACATCTaGCCTAGCAGGTACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SCCNFGSSRHPFVQMATLLATYI*PSRYST Trigger: GGTGCTGTACCTGCTAGGCAAGATGTATGTGGCTAA...GAGAGTGGCCATTTGAACAAAGGGATGCCTGCTAGATCCAAAATTACAGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 72 bp | ATAGCCTGTGCTCCAGGGCAGGCGGCGGCCGGTGTCTaGGGGGCTTTGCACAGCCCGGCCTGCGTGGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: IACAPGQAAAGV*GALHSPACVVV Trigger: GACGACCACGCAGGCCGGGCTGTGCAAAGCCCCCCAGACACCGGCCGCCGCCTGCCCTGGAGCACAGGCTAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CAA 90 bp | TGGGCGGCGGGAGGCGCTGAGGTAGCGTTGGGCAGATCTGGGGACTaGGAGCGCTGGGAAGAAGTGCCACCCGAGCTCACCAGGTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: WAAGGAEVALGRSGD*ERWEEVPPELTRCA Trigger: GGCGCACCTGGTGAGCTCGGGTGGCACTTCTTCCCAGCGCTCCAAGTCCCCAGATCTGCCCAACGCTACCTCAGCGCCTCCCGCCGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS GCA 72 bp | TGGGCAGATCTGGGGACTTGGAGCGCTGGGAAGAAGTaGCACCCGAGCTCACCAGGTGCGCCACGGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WADLGTWSAGKK*HPSSPGAPRLS Trigger: GCTCAGCCGTGGCGCACCTGGTGAGCTCGGGTGGCACTTCTTCCCAGCGCTCCAAGTCCCCAGATCTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS GCA 72 bp | TGGTCGTCGGCGCGCCGCAGCCCTCCGGGGCTCAGCTaGAGAAAGGTGGGTCGAGAGAAGCTCACAGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: WSSARRSPPGLS*RKVGREKLTVV Trigger: GACTACTGTGAGCTTCTCTCGACCCACCTTTCTGCAGCTGAGCCCCGGAGGGCTGCGGCGCGCCGACGACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CAA 72 bp | GGAGGCGCTGAGGTAGCGTTGGGCAGATCTGGGGACTaGGAGCGCTGGGAAGAAGTGCCACCCGAGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GGAEVALGRSGD*ERWEEVPPELT Trigger: GGTGAGCTCGGGTGGCACTTCTTCCCAGCGCTCCAAGTCCCCAGATCTGCCCAACGCTACCTCAGCGCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS GCA 72 bp | GATGTGGCGATGCAGGAGCCGGGAGGCCATTTCAGCTaGTCCTCCACCAGCGTGCCCATCAAACAGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: DVAMQEPGGHFS*SSTSVPIKQAP Trigger: TGGGGCCTGTTTGATGGGCACGCTGGTGGAGGAGCAGCTGAAATGGCCTCCCGGCTCCTGCATCGCCACATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 72 bp | AGCACCACTAGTGCACAGCAGCCCCCTTCCACTTGGTaGCCACGCCGCTCCCGAGCCATCTGCTCATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: STTSAQQPPSTW*PRRSRAICSSM Trigger: CATGGATGAGCAGATGGCTCGGGAGCGGCGTGGCCACCAAGTGGAAGGGGGCTGCTGTGCACTAGTGGTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 72 bp | TACAGCACCACTAGTGCACAGCAGCCCCCTTCCACTTaGTGGCCACGCCGCTCCCGAGCCATCTGCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: YSTTSAQQPPST*WPRRSRAICSS Trigger: GGATGAGCAGATGGCTCGGGAGCGGCGTGGCCACCAAGTGGAAGGGGGCTGCTGTGCACTAGTGGTGCTGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CAA 72 bp | GGTGTTTCTTGGGCGGCGGGAGGCGCTGAGGTAGCGTaGGGCAGATCTGGGGACTTGGAGCGCTGGGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GVSWAAGGAEVA*GRSGDLERWEE Trigger: TTCTTCCCAGCGCTCCAAGTCCCCAGATCTGCCCAACGCTACCTCAGCGCCTCCCGCCGCCCAAGAAACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CAA 72 bp | AGACCGAGATGTCATCCCCGGAACCCAGCTTGTTGTTaGGGAGACGCCAGCCACGGTCCCGGGGGATTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPRCHPRNPACC*GDASHGPGGFP Trigger: GGGGAATCCCCCGGGACCGTGGCTGGCGTCTCCCAAACAACAAGCTGGGTTCCGGGGATGACATCTCGGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CAA 90 bp | GAACTCTTAGGTGTTTCTTGGGCGGCGGGAGGCGCTGAGGTAGCGTaGGGCAGATCTGGGGACTTGGAGCGCTGGGAAGAAGTGCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: ELLGVSWAAGGAEVA*GRSGDLERWEEVPP Trigger: GGGTGGCACTTCTTCCCAGCGCTCCAAGTCCCCAGATCTGCCCAACGCTACCTCAGCGCCTCCCGCCGCCCAAGAAACACCTAAGAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS TCA 72 bp | GGAACTCTTAGGTGTTTCTTGGGCGGCGGGAGGCGCTaGGGTAGCGTTGGGCAGATCTGGGGACTTGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GTLRCFLGGGRR*GSVGQIWGLGA Trigger: CGCTCCAAGTCCCCAGATCTGCCCAACGCTACCTCAGCGCCTCCCGCCGCCCAAGAAACACCTAAGAGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CCA 72 bp | TTCCCAGGCTTCTCCCGGGAACTCTTAGGTGTTTCTTaGGCGGCGGGAGGCGCTGAGGTAGCGTTGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FPGFSRELLGVS*AAGGAEVALGR Trigger: TCTGCCCAACGCTACCTCAGCGCCTCCCGCCGCCCAAGAAACACCTAAGAGTTCCCGGGAGAAGCCTGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CAA 72 bp | ATGACGAAGACCGAGATGTCATCCCCGGAACCCAGCTaGTTGTTTGGGAGACGCCAGCCACGGTCCCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MTKTEMSSPEPS*LFGRRQPRSRG Trigger: CCCCCGGGACCGTGGCTGGCGTCTCCCAAACAACAAGCTGGGTTCCGGGGATGACATCTCGGTCTTCGTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CAA 72 bp | ACGAAGACCGAGATGTCATCCCCGGAACCCAGCTTGTaGTTTGGGAGACGCCAGCCACGGTCCCGGGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: TKTEMSSPEPSL*FGRRQPRSRGI Trigger: AATCCCCCGGGACCGTGGCTGGCGTCTCCCAAACAACAAGCTGGGTTCCGGGGATGACATCTCGGTCTTCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS TCA 72 bp | CTGTGGAGACCAGCAGGATTGAGGGCTAACCAACTGTaGAGGACTGGGGGCTCCTGGGGTTCCAGGAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LWRPAGLRANQL*RTGGSWGSRSG Trigger: TCCACTCCTGGAACCCCAGGAGCCCCCAGTCCTTCACAGTTGGTTAGCCCTCAATCCTGCTGGTCTCCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS GCA 72 bp | CCCCCAGGACCAGAGCTTGGGCCAGAGCTGTATACCTaGTGGGATCATTGGGCTCATAGGATGACAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: PPGPELGPELYT*WDHWAHRMTAP Trigger: GGGTGCTGTCATCCTATGAGCCCAATGATCCCAGCAGGTATACAGCTCTGGCCCAAGCTCTGGTCCTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
||
| CDS CAA 90 bp | CGGACAATGATGGCCCTGCTGTCACCTGCGTTAGCCACATACATCTaGCCTAGCAGGTACAGCACCACTAGTGCACAGCAGCCCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RTMMALLSPALATYI*PSRYSTTSAQQPPS Trigger: GGAAGGGGGCTGCTGTGCACTAGTGGTGCTGTACCTGCTAGGCAAGATGTATGTGGCTAACGCAGGTGACAGCAGGGCCATCATTGTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS GCA 72 bp | TCTACTAGATCCTTGAGCTGTTCCCGGATGTGGCGATaGAGGAGCCGGGAGGCCATTTCAGCTGCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: STRSLSCSRMWR*RSREAISAAPP Trigger: TGGAGGAGCAGCTGAAATGGCCTCCCGGCTCCTGCATCGCCACATCCGGGAACAGCTCAAGGATCTAGTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS CAA 72 bp | AGCACCCTGTCCACAGTGGCAGCTACCTCAGAGTCATaGGTCACATCCCACAAGCCATCTGTTCCCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: STLSTVAATSES*VTSHKPSVPRT Trigger: GGTCCTGGGAACAGATGGCTTGTGGGATGTGACCAATGACTCTGAGGTAGCTGCCACTGTGGACAGGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS CAA 72 bp | ATGGCCCTGCTGTCACCTGCGTTAGCCACATACATCTaGCCTAGCAGGTACAGCACCACTAGTGCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: MALLSPALATYI*PSRYSTTSAQQ Trigger: CTGCTGTGCACTAGTGGTGCTGTACCTGCTAGGCAAGATGTATGTGGCTAACGCAGGTGACAGCAGGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS CAA 72 bp | GGCTTGATGGACAGAGTAGAGCTGCAGACCTTAAGGTaGTGGTCTCCCAAGCCCCGTGTCACCCCAATGGTA | + |
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Preference number: 6 (lower is better) Translates to: GLMDRVELQTLR*WSPKPRVTPMV Trigger: TACCATTGGGGTGACACGGGGCTTGGGAGACCACAACCTTAAGGTCTGCAGCTCTACTCTGTCCATCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS TCA 72 bp | CCTTGGGCTGAACTCTTCGGGGAAATTCAAGGTGGGTaGACTCACTGCCCAGCAGTTCTGGTTTCAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PWAELFGEIQGG*THCPAVLVSGS Trigger: GCTTCCTGAAACCAGAACTGCTGGGCAGTGAGTTCACCCACCTTGAATTTCCCCGAAGAGTTCAGCCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS CCA 72 bp | AGTATTTCTACTAGATCCTTGAGCTGTTCCCGGATGTaGCGATGCAGGAGCCGGGAGGCCATTTCAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SISTRSLSCSRM*RCRSREAISAA Trigger: AGCAGCTGAAATGGCCTCCCGGCTCCTGCATCGCCACATCCGGGAACAGCTCAAGGATCTAGTAGAAATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS TCA 72 bp | CTCCGACTTTCCACATACACAACCTCGCAGCAAGCCTaGTCCTCATTGTGCCTGCTCTTGCCAGCATTGATG | + |
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Preference number: 6 (lower is better) Translates to: LRLSTYTTSQQA*SSLCLLLPALM Trigger: CATCAATGCTGGCAAGAGCAGGCACAATGAGGATCAGGCTTGCTGCGAGGTTGTGTATGTGGAAAGTCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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| CDS CCA 72 bp | CCACAAGCCATCTGTTCCCAGGACCAGCACATCATCTaGACAGTGCTCATACTGCGTCAGATCATACACTCG | + |
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Preference number: 6 (lower is better) Translates to: PQAICSQDQHII*TVLILRQIIHS Trigger: CGAGTGTATGATCTGACGCAGTATGAGCACTGTCCAGATGATGTGCTGGTCCTGGGAACAGATGGCTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002298.7 |
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