Pregenerated sensors for PPM1H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034613Ensembl transcript IDs: ENSMUST00000067918.12, ENSMUST00000161487.8, ENSMUST00000162969.2
Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | ATGAGAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTaGTGGGGCAGGGGCTGGGTGCTCATTCCAAGTTTGAGGATACCC | + |
Preference number: 1 (lower is better) Translates to: MRTRKPWWLTPKSQN*WGRGWVLIPSLRIP Trigger: GGGTATCCTCAAACTTGGAATGAGCACCCAGCCCCTGCCCCAGCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CCA 90 bp | CAGCACGGGCATGTTTGTCAGGCCGGTTCTACTGGGCTGCTCTGCTaGCTTAGCTCTGCTGGCTTCTGCCCACAACACATCATTTCTCGG | + |
Preference number: 1 (lower is better) Translates to: QHGHVCQAGSTGLLC*LSSAGFCPQHIISR Trigger: CCGAGAAATGATGTGTTGTGGGCAGAAGCCAGCAGAGCTAAGCCAGCAGAGCAGCCCAGTAGAACCGGCCTGACAAACATGCCCGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR GCA 90 bp | AGTTCCAGTGCACACACACACACACTCACACACATGACGCCACATTaGCACATAGCACCCGAAGATTGCCCAGAGAGGTGGGCTGTGGTC | + |
Preference number: 1 (lower is better) Translates to: SSSAHTHTLTHMTPH*HIAPEDCPERWAVV Trigger: GACCACAGCCCACCTCTCTGGGCAATCTTCGGGTGCTATGTGGCAATGTGGCGTCATGTGTGTGAGTGTGTGTGTGTGTGCACTGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 90 bp | ATCCAGCACGGGCATGTTTGTCAGGCCGGTTCTACTGGGCTGCTCTaGTGGCTTAGCTCTGCTGGCTTCTGCCCACAACACATCATTTCT | + |
Preference number: 1 (lower is better) Translates to: IQHGHVCQAGSTGLL*WLSSAGFCPQHIIS Trigger: AGAAATGATGTGTTGTGGGCAGAAGCCAGCAGAGCTAAGCCAGCAGAGCAGCCCAGTAGAACCGGCCTGACAAACATGCCCGTGCTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CCA 90 bp | TGTGCCCATGTGCCCATGTGCGTGCCACTGAGGCATGCACACCAGTaGATGCATAGTAGGAAGGGGGTCTCAGCTCTTAAGTTTCTACAC | + |
Preference number: 1 (lower is better) Translates to: CAHVPMCVPLRHAHQ*MHSRKGVSALKFLH Trigger: GTGTAGAAACTTAAGAGCTGAGACCCCCTTCCTACTATGCATCCACTGGTGTGCATGCCTCAGTGGCACGCACATGGGCACATGGGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 90 bp | GTGGATGGCTTACCAGCCTGGAAGAAGTGCCCCTCCCTTCTCCCCTaGGAAGGAATTCTCGTAAACACAAGAGCTGGGATTGCATCTTGG | + |
Preference number: 1 (lower is better) Translates to: VDGLPAWKKCPSLLP*EGILVNTRAGIASW Trigger: CCAAGATGCAATCCCAGCTCTTGTGTTTACGAGAATTCCTTCCCAGGGGAGAAGGGAGGGGCACTTCTTCCAGGCTGGTAAGCCATCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 90 bp | CCAAACCCAGTTGATGAAGTGCTAGAGATGGCACCCAGGGCCTTGTaGATGATGGGTAAGCACTCTAGCTCAGCCCCTGTTGGTAACTTT | + |
Preference number: 1 (lower is better) Translates to: PNPVDEVLEMAPRAL*MMGKHSSSAPVGNF Trigger: AAAGTTACCAACAGGGGCTGAGCTAGAGTGCTTACCCATCATGCACAAGGCCCTGGGTGCCATCTCTAGCACTTCATCAACTGGGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR GCA 90 bp | CTGTGTAGACCAGCCTGGCCTCGAACTCAGAGAACCACCTACCCCTaGCTCTCAAATGCTGGCATTAAAGTCACATACTACCATTCCTGG | + |
Preference number: 1 (lower is better) Translates to: LCRPAWPRTQRTTYP*LSNAGIKVTYYHSW Trigger: CCAGGAATGGTAGTATGTGACTTTAATGCCAGCATTTGAGAGGCAGGGGTAGGTGGTTCTCTGAGTTCGAGGCCAGGCTGGTCTACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CCA 90 bp | GAAACACTAACTTCTTTGGCTTGTCCCAGTCAGACAGCTGCCTATTaGTCCAGCCTAACTGTCACCTTCCTTCCCAGCCACAAAGGGCAG | + |
Preference number: 1 (lower is better) Translates to: ETLTSLACPSQTAAY*SSLTVTFLPSHKGQ Trigger: CTGCCCTTTGTGGCTGGGAAGGAAGGTGACAGTTAGGCTGGACCAATAGGCAGCTGTCTGACTGGGACAAGCCAAAGAAGTTAGTGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 90 bp | GCTGATCAATATGTGGGAGAACCTGTCAGCAGGACTAACCTGAAGTaGGAACATGAGAACGAGGAAGCCGTGGTGGCTCACACCGAAATC | + |
Preference number: 1 (lower is better) Translates to: ADQYVGEPVSRTNLK*EHENEEAVVAHTEI Trigger: GATTTCGGTGTGAGCCACCACGGCTTCCTCGTTCTCATGTTCCCACTTCAGGTTAGTCCTGCTGACAGGTTCTCCCACATATTGATCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR GCA 90 bp | TTGTCACTTAGGAAGACGCTTCAGGGTTCACACTCTTCAGGGAAGTaGCAGGAGTCAGAAGAGCAGATGCAGGCTGAGCGAAGAAGAGAT | + |
Preference number: 1 (lower is better) Translates to: LSLRKTLQGSHSSGK*QESEEQMQAERRRD Trigger: ATCTCTTCTTCGCTCAGCCTGCATCTGCTCTTCTGACTCCTGGCACTTCCCTGAAGAGTGTGAACCCTGAAGCGTCTTCCTAAGTGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 90 bp | GGGACTAGCCAGATGGGTCTAGTCTCTGATCTGGACACTGTCCAGTaGCAATTTGGAAAGTTCCATTGGAGGGGAATGAGAACGATAGGA | + |
Preference number: 1 (lower is better) Translates to: GTSQMGLVSDLDTVQ*QFGKFHWRGMRTIG Trigger: TCCTATCGTTCTCATTCCCCTCCAATGGAACTTTCCAAATTGCCACTGGACAGTGTCCAGATCAGAGACTAGACCCATCTGGCTAGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 90 bp | TGGATGCATAGTAGGAAGGGGGTCTCAGCTCTTAAGTTTCTACACTaGGATTCCCTTGAGGAATGGGGGAACATCACAATGACCAACTGC | + |
Preference number: 1 (lower is better) Translates to: WMHSRKGVSALKFLH*DSLEEWGNITMTNC Trigger: GCAGTTGGTCATTGTGATGTTCCCCCATTCCTCAAGGGAATCGCAGTGTAGAAACTTAAGAGCTGAGACCCCCTTCCTACTATGCATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 90 bp | ATCTACAATTCTAGGAATGTGGATGGCTTACCAGCCTGGAAGAAGTaGCCCTCCCTTCTCCCCTGGGAAGGAATTCTCGTAAACACAAGA | + |
Preference number: 1 (lower is better) Translates to: IYNSRNVDGLPAWKK*PSLLPWEGILVNTR Trigger: TCTTGTGTTTACGAGAATTCCTTCCCAGGGGAGAAGGGAGGGGCACTTCTTCCAGGCTGGTAAGCCATCCACATTCCTAGAATTGTAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR TCA 90 bp | AGAGGTGGGCTGTGGTCTGCAGGCTGTAATACTTCTCTGTATTCATaGGCCCTGACATTCATAAGCTCCCAACACAAAATCCTGTCCTGT | + |
Preference number: 1 (lower is better) Translates to: RGGLWSAGCNTSLYS*ALTFISSQHKILSC Trigger: ACAGGACAGGATTTTGTGTTGGGAGCTTATGAATGTCAGGGCTCATGAATACAGAGAAGTATTACAGCCTGCAGACCACAGCCCACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 90 bp | TGTTTGGCTCTTATTCAGTGTCCAGACTTGTTACCAAAGAAGAAGTaGAAACCTAAGGGTCACCTGGAAGCAAAACCAGAGAGGCCTTTG | + |
Preference number: 1 (lower is better) Translates to: CLALIQCPDLLPKKK*KPKGHLEAKPERPL Trigger: CAAAGGCCTCTCTGGTTTTGCTTCCAGGTGACCCTTAGGTTTCCACTTCTTCTTTGGTAACAAGTCTGGACACTGAATAAGAGCCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 90 bp | ACCAGCAGGACTCCAGGTTTTAGGGTAATTGGAGTCTTTCAGATTTaGTTTGACAATGGAAGAATTGGGAGAATGTTGCCACTGGCACCT | + |
Preference number: 1 (lower is better) Translates to: TSRTPGFRVIGVFQI*FDNGRIGRMLPLAP Trigger: AGGTGCCAGTGGCAACATTCTCCCAATTCTTCCATTGTCAAACCAAATCTGAAAGACTCCAATTACCCTAAAACCTGGAGTCCTGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 90 bp | CCCTGCCTCTCAAATGCTGGCATTAAAGTCACATACTACCATTCCTaGCTCAGTCTTGACCATGTTTTCAAAGCTCTTAAAATGCTCCGA | + |
Preference number: 1 (lower is better) Translates to: PCLSNAGIKVTYYHS*LSLDHVFKALKMLR Trigger: TCGGAGCATTTTAAGAGCTTTGAAAACATGGTCAAGACTGAGCCAGGAATGGTAGTATGTGACTTTAATGCCAGCATTTGAGAGGCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CCA 90 bp | GATTGCATCTTGGGGGAAATGACACCATTGGTTCCTTCCTTGGGTTaGAAATGTCTGAATTATACCAAGTTGTCAGAAAGCCGATATCCT | + |
Preference number: 1 (lower is better) Translates to: DCILGEMTPLVPSLG*KCLNYTKLSESRYP Trigger: AGGATATCGGCTTTCTGACAACTTGGTATAATTCAGACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAAGATGCAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 90 bp | GTTTACAAAAGTCAATGTTTCACAATCACGAGGCATAAAGGTACGTaGTTCGAAAACCAATCTCCAGGCAGATTCTTCTCAGTTCACTAT | + |
Preference number: 1 (lower is better) Translates to: VYKSQCFTITRHKGT*FENQSPGRFFSVHY Trigger: ATAGTGAACTGAGAAGAATCTGCCTGGAGATTGGTTTTCGAACCACGTACCTTTATGCCTCGTGATTGTGAAACATTGACTTTTGTAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR TCA 90 bp | GGTAATTTTTGGAAACCCAGATCACCATATACATATTCTTACAATTaGTCCTTAGTAGGCGCCTCCTGGGGTTTCCAAAGAAACAAAGAA | + |
Preference number: 1 (lower is better) Translates to: GNFWKPRSPYTYSYN*SLVGASWGFQRNKE Trigger: TTCTTTGTTTCTTTGGAAACCCCAGGAGGCGCCTACTAAGGATCAATTGTAAGAATATGTATATGGTGATCTGGGTTTCCAAAAATTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 90 bp | ATAGAAACCAAGAGAAATATAACACTCAGTAGCAGGCTTTGTGTTTaGCTCTTATTCAGTGTCCAGACTTGTTACCAAAGAAGAAGTGGA | + |
Preference number: 1 (lower is better) Translates to: IETKRNITLSSRLCV*LLFSVQTCYQRRSG Trigger: TCCACTTCTTCTTTGGTAACAAGTCTGGACACTGAATAAGAGCCAAACACAAAGCCTGCTACTGAGTGTTATATTTCTCTTGGTTTCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR GCA 90 bp | CCTGGCCTCGAACTCAGAGAACCACCTACCCCTGCCTCTCAAATGCTGGCATTACCGAAATCCCAGAACTaGTGGGGCAGGGGCTGGGTG | + |
Preference number: 2 (lower is better) Translates to: PGLELREPPTPASQMLALPKSQN*WGRGWV Trigger: CACCCAGCCCCTGCCCCAGCAGTTCTGGGATTTCGG...TAATGCCAGCATTTGAGAGGCAGGGGTAGGTGGTTCTCTGAGTTCGAGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR-3UTR GCA 90 bp | CCCAGCAGGTCCCTCCCGCACCTTTGTGTGGTGACTGTTGGTGTTAGAGGAACACTTCTCCCAGAGAGATaGTGGCAGCTTGTCGGGCTG | + |
Preference number: 2 (lower is better) Translates to: PSRSLPHLCVVTVGVRGTLLPER*WQLVGL Trigger: CAGCCCGACAAGCTGCCAGCATCTCTCTGGGAGAAG...TGTTCCTCTAACACCAACAGTCACCACACAAAGGTGCGGGAGGGACCTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR GCA 90 bp | CCTGGCCTCGAACTCAGAGAACCACCTACCCCTGCCTCTCAAATGCTGGCATTAGCACCCAGGGCCTTGTaGATGATGGGTAAGCACTCT | + |
Preference number: 2 (lower is better) Translates to: PGLELREPPTPASQMLALAPRAL*MMGKHS Trigger: AGAGTGCTTACCCATCATGCACAAGGCCCTGGGTGC...TAATGCCAGCATTTGAGAGGCAGGGGTAGGTGGTTCTCTGAGTTCGAGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR-3UTR CCA 90 bp | GAGGGAGCACCACCCATTCCAGAAATAAAACCCAGCCTCTCACAGCTAAACCTCCTCCCAGAGAGATGCTaGCAGCTTGTCGGGCTGAGG | + |
Preference number: 2 (lower is better) Translates to: EGAPPIPEIKPSLSQLNLLPERC*QLVGLR Trigger: CCTCAGCCCGACAAGCTGCCAGCATCTCTCTGGGAG...GAGGTTTAGCTGTGAGAGGCTGGGTTTTATTTCTGGAATGGGTGGTGCTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 90 bp | CACACTCACACACATGACGCCACATTGCCACATAGCACCCGAAGATaGCCCAGAGAGGTGGGCTGTGGTCTGCAGGCTGTAATACTTCTC | + |
Preference number: 2 (lower is better) Translates to: HTHTHDATLPHSTRR*PREVGCGLQAVILL Trigger: GAGAAGTATTACAGCCTGCAGACCACAGCCCACCTCTCTGGGCAATCTTCGGGTGCTATGTGGCAATGTGGCGTCATGTGTGTGAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 90 bp | AAGTTCCAGTGCACACACACACACACTCACACACATGACGCCACATaGCCACATAGCACCCGAAGATTGCCCAGAGAGGTGGGCTGTGGT | + |
Preference number: 2 (lower is better) Translates to: KFQCTHTHTHTHDAT*PHSTRRLPREVGCG Trigger: ACCACAGCCCACCTCTCTGGGCAATCTTCGGGTGCTATGTGGCAATGTGGCGTCATGTGTGTGAGTGTGTGTGTGTGTGCACTGGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | ACAGAGTTAAACCCAAAGCACAGAGCAATATCAGTGCTGGGCAGATCTGCCATGGGCAGCTTGTCGGGCTaGGGAGGGGCTTTCACCAGT | + |
Preference number: 2 (lower is better) Translates to: TELNPKHRAISVLGRSAMGSLSG*GGAFTS Trigger: ACTGGTGAAAGCCCCTCCTCAGCCCGACAAGCTGCC...CATGGCAGATCTGCCCAGCACTGATATTGCTCTGTGCTTTGGGTTTAACTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | TCCTCTGAGGCTATTAGGGCAAGCAAGTCCAGCTGGAAGTCAGACAGGCATGATAGGCGTCTGGGGTGGTaGAGACTTCCTGAAGGAGAG | + |
Preference number: 2 (lower is better) Translates to: SSEAIRASKSSWKSDRHDRRLGW*RLPEGE Trigger: CTCTCCTTCAGGAAGTCTTCACCACCCCAGACGCCT...ATCATGCCTGTCTGACTTCCAGCTGGACTTGCTTGCCCTAATAGCCTCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGCCATGTGCGTGCCACTaGGGCATGCACACCAGTGGA | + |
Preference number: 2 (lower is better) Translates to: SCPGGTDSLKLESHHSITPCACH*GMHTSG Trigger: TCCACTGGTGTGCATGCCTCAGTGGCACGCACATGG...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | GAAACTTTCCTGCCAGAGCTGCTTTCTTCTAGGGCTTCCAGTTTCCCAGGGGGCGATGACCTGAACTTCTaGCCTTCTTGCTTCCACATC | + |
Preference number: 2 (lower is better) Translates to: ETFLPELLSSRASSFPGGDDLNF*PSCFHI Trigger: GATGTGGAAGCAAGAAGGTCAGAAGTTCAGGTCATC...GCCCCCTGGGAAACTGGAAGCCCTAGAAGAAAGCAGCTCTGGCAGGAAAGTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR-3UTR TCA 90 bp | CCATCTAGGGGCATGATTTCCTTCAAGAAAGTGACTTTCAGGGGCGAGTGGTGGACCCTTGCACAAAGGTaGCAGGAAGAGAGTAGTCAC | + |
Preference number: 2 (lower is better) Translates to: PSRGMISFKKVTFRGEWWTLAQR*QEESSH Trigger: GTGACTACTCTCTTCCTGTCACCTTTGTGCAAGGGT...CCACCACTCGCCCCTGAAAGTCACTTTCTTGAAGGAAATCATGCCCCTAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | AAGCTCCCAACACAAAATCCTGTCCTGTGGCTGAAGTCTGCCCTACGACTCTATCGGGGGAGGGGGAGATaGGAACAAATCAGACACTTT | + |
Preference number: 2 (lower is better) Translates to: KLPTQNPVLWLKSALRLYRGRGR*EQIRHF Trigger: AAAGTGTCTGATTTGTTCTCATCTCCCCCTCCCCCG...ATAGAGTCGTAGGGCAGACTTCAGCCACAGGACAGGATTTTGTGTTGGGAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | AACACTTTCTCAAATTTCCCATTTGTGTGTGACTTTGAGAACTGGGCGATGGTGCCAGGACACAGAAGGTaGGGGAGCACCACCCATTCC | + |
Preference number: 2 (lower is better) Translates to: NTFSNFPFVCDFENWAMVPGHRR*GSTTHS Trigger: GGAATGGGTGGTGCTCCCTCACCTTCTGTGTCCTGG...CACCATCGCCCAGTTCTCAAAGTCACACACAAATGGGAAATTTGAGAAAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | ACAGAGTTAAACCCAAAGCACAGAGCAATATCAGTGCTGGGCAGATCTGCCATGGGTACAAGAACTTGCTaGGCTACGGCACTGGATGCT | + |
Preference number: 2 (lower is better) Translates to: TELNPKHRAISVLGRSAMGTRTC*ATALDA Trigger: AGCATCCAGTGCCGTAGCTCAGCAAGTTCTTGTACC...CATGGCAGATCTGCCCAGCACTGATATTGCTCTGTGCTTTGGGTTTAACTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR GCA 90 bp | TCCTCTGAGGCTATTAGGGCAAGCAAGTCCAGCTGGAAGTCAGACAGGCATGATCATCCCAGATACCCTTaGACAAAGGTGACAGGAAGA | + |
Preference number: 2 (lower is better) Translates to: SSEAIRASKSSWKSDRHDHPRYP*TKVTGR Trigger: TCTTCCTGTCACCTTTGTGCAAGGGTATCTGGGATG...ATCATGCCTGTCTGACTTCCAGCTGGACTTGCTTGCCCTAATAGCCTCAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR CCA 90 bp | TCCTCTGAGGCTATTAGGGCAAGCAAGTCCAGCTGGAAGTCAGACAGGCATGATAAAATATGCATCACCTaGAATCCAGCCCAGGCACTC | + |
Preference number: 2 (lower is better) Translates to: SSEAIRASKSSWKSDRHDKICIT*NPAQAL Trigger: GAGTGCCTGGGCTGGATTCCAGGTGATGCATATTTT...ATCATGCCTGTCTGACTTCCAGCTGGACTTGCTTGCCCTAATAGCCTCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR CCA 90 bp | TCCTCTGAGGCTATTAGGGCAAGCAAGTCCAGCTGGAAGTCAGACAGGCATGATACTCCCCATCTGGGCTaGGAAAAATATGCATCACCT | + |
Preference number: 2 (lower is better) Translates to: SSEAIRASKSSWKSDRHDTPHLG*EKYASP Trigger: AGGTGATGCATATTTTTCCCAGCCCAGATGGGGAGT...ATCATGCCTGTCTGACTTCCAGCTGGACTTGCTTGCCCTAATAGCCTCAGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR CCA 90 bp | GAAGAAGTGCCCCTCCCTTCTCCCCTGGGAAGGAATTCTCGTAAACACAAGAGCAGACAAACTGTCACCTaGGACATTGCTCTGGACAAA | + |
Preference number: 2 (lower is better) Translates to: EEVPLPSPLGRNSRKHKSRQTVT*DIALDK Trigger: TTTGTCCAGAGCAATGTCCCAGGTGACAGTTTGTCT...GCTCTTGTGTTTACGAGAATTCCTTCCCAGGGGAGAAGGGAGGGGCACTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR CCA 90 bp | ACAGAGTTAAACCCAAAGCACAGAGCAATATCAGTGCTGGGCAGATCTGCCATGAAGGAGAGGCATCCATaGTCAGATGCCCAGTCTTCC | + |
Preference number: 2 (lower is better) Translates to: TELNPKHRAISVLGRSAMKERHP*SDAQSS Trigger: GGAAGACTGGGCATCTGACCATGGATGCCTCTCCTT...CATGGCAGATCTGCCCAGCACTGATATTGCTCTGTGCTTTGGGTTTAACTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 90 bp | CCCCTGGGAAGGAATTCTCGTAAACACAAGAGCTGGGATTGCATCTaGGGGGAAATGACACCATTGGTTCCTTCCTTGGGTTGGAAATGT | + |
Preference number: 2 (lower is better) Translates to: PLGRNSRKHKSWDCI*GEMTPLVPSLGWKC Trigger: ACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAAGATGCAATCCCAGCTCTTGTGTTTACGAGAATTCCTTCCCAGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGGTGGTGAAGACTTCCTaGAGGAGAGGCATCCATGGT | + |
Preference number: 2 (lower is better) Translates to: SCPGGTDSLKLESHHSITVVKTS*RRGIHG Trigger: ACCATGGATGCCTCTCCTTCAGGAAGTCTTCACCAC...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR TCA 90 bp | AACACATCATTTCTCGGTGTAGTAGCTGAAACTTTCCTGCCAGAGCTGCTTTCTCCAGGGCCTTGTGCATaGTGGGTAAGCACTCTAGCT | + |
Preference number: 2 (lower is better) Translates to: NTSFLGVVAETFLPELLSPGPCA*WVSTLA Trigger: AGCTAGAGTGCTTACCCATCATGCACAAGGCCCTGG...AGAAAGCAGCTCTGGCAGGAAAGTTTCAGCTACTACACCGAGAAATGATGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR-3UTR TCA 90 bp | GGAGCACCACCCATTCCAGAAATAAAACCCAGCCTCTCACAGCTAAACCTCCAGGAACTGTTGGTCCAATaGAACACCCACATTTTGAAG | + |
Preference number: 2 (lower is better) Translates to: GAPPIPEIKPSLSQLNLQELLVQ*NTHILK Trigger: CTTCAAAATGTGGGTGTTTCATTGGACCAACAGTTC...CTGGAGGTTTAGCTGTGAGAGGCTGGGTTTTATTTCTGGAATGGGTGGTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR GCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGGGGCTGGGAAAAATATaGATCACCTGGAATCCAGCC | + |
Preference number: 2 (lower is better) Translates to: SCPGGTDSLKLESHHSITGLGKI*ITWNPA Trigger: GGCTGGATTCCAGGTGATGCATATTTTTCCCAGCCC...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR GCA 90 bp | AAGCTCCCAACACAAAATCCTGTCCTGTGGCTGAAGTCTGCCCTACGACTCTATTGTCACCTGGGACATTaGTCTGGACAAAACTATAGG | + |
Preference number: 2 (lower is better) Translates to: KLPTQNPVLWLKSALRLYCHLGH*SGQNYR Trigger: CCTATAGTTTTGTCCAGAGCAATGTCCCAGGTGACA...ATAGAGTCGTAGGGCAGACTTCAGCCACAGGACAGGATTTTGTGTTGGGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR GCA 90 bp | TCCTCTGAGGCTATTAGGGCAAGCAAGTCCAGCTGGAAGTCAGACAGGCATGATCTTAAGTTTCTACACTaGGATTCCCTTGAGGAATGG | + |
Preference number: 2 (lower is better) Translates to: SSEAIRASKSSWKSDRHDLKFLH*DSLEEW Trigger: CCATTCCTCAAGGGAATCGCAGTGTAGAAACTTAAG...ATCATGCCTGTCTGACTTCCAGCTGGACTTGCTTGCCCTAATAGCCTCAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR GCA 90 bp | CTGTTGGTGTTAGAGGAACAAAGCTTTAGTTGTCACTTAGGAAGACGCTTCAGGGATACTATGCCCATGTaGCCATGTGCCCATGTGCGT | + |
Preference number: 2 (lower is better) Translates to: LLVLEEQSFSCHLGRRFRDTMPM*PCAHVR Trigger: ACGCACATGGGCACATGGGCACATGGGCATAGTATC...CCTGAAGCGTCTTCCTAAGTGACAACTAAAGCTTTGTTCCTCTAACACCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CCA 90 bp | ACAGAGTTAAACCCAAAGCACAGAGCAATATCAGTGCTGGGCAGATCTGCCATGAACTATAGGTGTGTATaGGGCACGGAACATGGGACT | + |
Preference number: 2 (lower is better) Translates to: TELNPKHRAISVLGRSAMNYRCV*GTEHGT Trigger: AGTCCCATGTTCCGTGCCCCATACACACCTATAGTT...CATGGCAGATCTGCCCAGCACTGATATTGCTCTGTGCTTTGGGTTTAACTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CCA 90 bp | AACACTTTCTCAAATTTCCCATTTGTGTGTGACTTTGAGAACTGGGCGATGGTGCACTCAAACCTCCTGTaGTGTGGCCTGGAGAACAGC | + |
Preference number: 2 (lower is better) Translates to: NTFSNFPFVCDFENWAMVHSNLL*CGLENS Trigger: GCTGTTCTCCAGGCCACACCACAGGAGGTTTGAGTG...CACCATCGCCCAGTTCTCAAAGTCACACACAAATGGGAAATTTGAGAAAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR TCA 90 bp | CCATCTAGGGGCATGATTTCCTTCAAGAAAGTGACTTTCAGGGGCGAGTGGTGGCATTTTGCAGAATTCTaGGTGTGTTGTTTCTTTGGC | + |
Preference number: 2 (lower is better) Translates to: PSRGMISFKKVTFRGEWWHFAEF*VCCFFG Trigger: GCCAAAGAAACAACACACTCAGAATTCTGCAAAATG...CCACCACTCGCCCCTGAAAGTCACTTTCTTGAAGGAAATCATGCCCCTAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CAA 90 bp | AGCTGGGATTGCATCTTGGGGGAAATGACACCATTGGTTCCTTCCTaGGGTTGGAAATGTCTGAATTATACCAAGTTGTCAGAAAGCCGA | + |
Preference number: 2 (lower is better) Translates to: SWDCILGEMTPLVPS*GWKCLNYTKLSESR Trigger: TCGGCTTTCTGACAACTTGGTATAATTCAGACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAAGATGCAATCCCAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR TCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGAGAGCAGCTGTGCAGTaGTCTTTAAACTGGACTTTG | + |
Preference number: 2 (lower is better) Translates to: SCPGGTDSLKLESHHSITRAAVQ*SLNWTL Trigger: CAAAGTCCAGTTTAAAGATCACTGCACAGCTGCTCT...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CCA 90 bp | ACAGAGTTAAACCCAAAGCACAGAGCAATATCAGTGCTGGGCAGATCTGCCATGAGACATTCTGAGCCGTaGTCCTCAACTTTTCAATGT | + |
Preference number: 2 (lower is better) Translates to: TELNPKHRAISVLGRSAMRHSEP*SSTFQC Trigger: ACATTGAAAAGTTGAGGACCACGGCTCAGAATGTCT...CATGGCAGATCTGCCCAGCACTGATATTGCTCTGTGCTTTGGGTTTAACTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGAGTGTGTTGTTTCTTTaGCCTTCCCAGGAATTCTCC | + |
Preference number: 2 (lower is better) Translates to: SCPGGTDSLKLESHHSITSVLFL*PSQEFS Trigger: GGAGAATTCCTGGGAAGGCCAAAGAAACAACACACT...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CAA 90 bp | GGATTGCATCTTGGGGGAAATGACACCATTGGTTCCTTCCTTGGGTaGGAAATGTCTGAATTATACCAAGTTGTCAGAAAGCCGATATCC | + |
Preference number: 2 (lower is better) Translates to: GLHLGGNDTIGSFLG*EMSELYQVVRKPIS Trigger: GGATATCGGCTTTCTGACAACTTGGTATAATTCAGACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAAGATGCAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CAA 90 bp | CGTAAACACAAGAGCTGGGATTGCATCTTGGGGGAAATGACACCATaGGTTCCTTCCTTGGGTTGGAAATGTCTGAATTATACCAAGTTG | + |
Preference number: 2 (lower is better) Translates to: RKHKSWDCILGEMTP*VPSLGWKCLNYTKL Trigger: CAACTTGGTATAATTCAGACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAAGATGCAATCCCAGCTCTTGTGTTTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CAA 90 bp | GGAGTCTTTCAGATTTGGTTTGACAATGGAAGAATTGGGAGAATGTaGCCACTGGCACCTACAGGATATTTACACTCCAGTTCTGACTCT | + |
Preference number: 2 (lower is better) Translates to: GVFQIWFDNGRIGRM*PLAPTGYLHSSSDS Trigger: AGAGTCAGAACTGGAGTGTAAATATCCTGTAGGTGCCAGTGGCAACATTCTCCCAATTCTTCCATTGTCAAACCAAATCTGAAAGACTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR TCA 90 bp | GATCATCAATATCCATCTAGGGGCATGATTTCCTTCAAGAAAGTGACTTTCAGGGAAGTCAGACAGGCATaGTTTCTAGACACACACCGA | + |
Preference number: 2 (lower is better) Translates to: DHQYPSRGMISFKKVTFREVRQA*FLDTHR Trigger: TCGGTGTGTGTCTAGAAATCATGCCTGTCTGACTTC...CCTGAAAGTCACTTTCTTGAAGGAAATCATGCCCCTAGATGGATATTGATGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CCA 90 bp | CTGTTGGTGTTAGAGGAACAAAGCTTTAGTTGTCACTTAGGAAGACGCTTCAGGCTCAACTTTTCAATGTaGCTCTTCTCCCAGAGAGAT | + |
Preference number: 2 (lower is better) Translates to: LLVLEEQSFSCHLGRRFRLNFSM*LFSQRD Trigger: ATCTCTCTGGGAGAAGAGCCACATTGAAAAGTTGAG...CCTGAAGCGTCTTCCTAAGTGACAACTAAAGCTTTGTTCCTCTAACACCAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGTTTGGAAAGTTCCATTaGAGGGGAATGAGAACGATA | + |
Preference number: 2 (lower is better) Translates to: SCPGGTDSLKLESHHSITFGKFH*RGMRTI Trigger: TATCGTTCTCATTCCCCTCCAATGGAACTTTCCAAA...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CCA 90 bp | GATCATCAATATCCATCTAGGGGCATGATTTCCTTCAAGAAAGTGACTTTCAGGGATTCCCTTGAGGAATaGGGGAACATCACAATGACC | + |
Preference number: 2 (lower is better) Translates to: DHQYPSRGMISFKKVTFRDSLEE*GNITMT Trigger: GGTCATTGTGATGTTCCCCCATTCCTCAAGGGAATC...CCTGAAAGTCACTTTCTTGAAGGAAATCATGCCCCTAGATGGATATTGATGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CAA 90 bp | GGAAGTCAGACAGGCATGATTTCTAGACACACACCGAAATACATTTaGCAGAATTCTGAGTGTGTTGTTTCTTTGGCCTTCCCAGGAATT | + |
Preference number: 2 (lower is better) Translates to: GSQTGMISRHTPKYI*QNSECVVSLAFPGI Trigger: AATTCCTGGGAAGGCCAAAGAAACAACACACTCAGAATTCTGCAAAATGTATTTCGGTGTGTGTCTAGAAATCATGCCTGTCTGACTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CCA 90 bp | GATCATCAATATCCATCTAGGGGCATGATTTCCTTCAAGAAAGTGACTTTCAGGTGGGCAGATCTGCCATaGGCATTAACGAATCACTTT | + |
Preference number: 2 (lower is better) Translates to: DHQYPSRGMISFKKVTFRWADLP*ALTNHF Trigger: AAAGTGATTCGTTAATGCCCATGGCAGATCTGCCCA...CCTGAAAGTCACTTTCTTGAAGGAAATCATGCCCCTAGATGGATATTGATGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR CCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGGGAGTCTTTCAGATTTaGTTTGACAATGGAAGAATT | + |
Preference number: 2 (lower is better) Translates to: SCPGGTDSLKLESHHSITGVFQI*FDNGRI Trigger: AATTCTTCCATTGTCAAACCAAATCTGAAAGACTCC...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CAA 90 bp | CAAATGCTGGCATTAAAGTCACATACTACCATTCCTGGCTCAGTCTaGACCATGTTTTCAAAGCTCTTAAAATGCTCCGATGCTAAGATA | + |
Preference number: 2 (lower is better) Translates to: QMLALKSHTTIPGSV*TMFSKLLKCSDAKI Trigger: TATCTTAGCATCGGAGCATTTTAAGAGCTTTGAAAACATGGTCAAGACTGAGCCAGGAATGGTAGTATGTGACTTTAATGCCAGCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
||
3UTR-3UTR CCA 90 bp | ATACTTATTTATATTTTTGCTAACAAATCCAGCACGGGCATGTTTGTCAGGCCGTTGTCATCTGTATCTTaGTTCACCTTAAGGAGGATT | + |
Preference number: 2 (lower is better) Translates to: ILIYIFANKSSTGMFVRPLSSVS*FTLRRI Trigger: AATCCTCCTTAAGGTGAACCAAGATACAGATGACAA...CGGCCTGACAAACATGCCCGTGCTGGATTTGTTAGCAAAAATATAAATAAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
||
3UTR GCA 72 bp | AGCACGGGCATGTTTGTCAGGCCGGTTCTACTGGGCTaGTCTGCTGGCTTAGCTCTGCTGGCTTCTGCCCAC | + |
Preference number: 3 (lower is better) Translates to: STGMFVRPVLLG*SAGLALLASAH Trigger: GTGGGCAGAAGCCAGCAGAGCTAAGCCAGCAGAGCAGCCCAGTAGAACCGGCCTGACAAACATGCCCGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
||
3UTR GCA 72 bp | AGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTaGTGGGGCAGGGGCTGGGTGCTCATTCCAAGTTTG | + |
Preference number: 3 (lower is better) Translates to: RKPWWLTPKSQN*WGRGWVLIPSL Trigger: CAAACTTGGAATGAGCACCCAGCCCCTGCCCCAGCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR GCA 72 bp | GGGCATGTTTGTCAGGCCGGTTCTACTGGGCTGCTCTaGTGGCTTAGCTCTGCTGGCTTCTGCCCACAACAC | + |
Preference number: 3 (lower is better) Translates to: GHVCQAGSTGLL*WLSSAGFCPQH Trigger: GTGTTGTGGGCAGAAGCCAGCAGAGCTAAGCCAGCAGAGCAGCCCAGTAGAACCGGCCTGACAAACATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
||
3UTR CCA 72 bp | AGCTGGCACACTCGCACAGTGTGTCACCTGCCGGGCTaGACCCTGGCTCTAAACAGTGGGGTGACTTTGTTC | + |
Preference number: 3 (lower is better) Translates to: SWHTRTVCHLPG*TLALNSGVTLF Trigger: GAACAAAGTCACCCCACTGTTTAGAGCCAGGGTCCAGCCCGGCAGGTGACACACTGTGCGAGTGTGCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | TGGGGTGGTGAAGACTTCCTGAAGGAGAGGCATCCATaGTCAGATGCCCAGTCTTCCCGCCGCAGTGAGCTG | + |
Preference number: 3 (lower is better) Translates to: WGGEDFLKERHP*SDAQSSRRSEL Trigger: CAGCTCACTGCGGCGGGAAGACTGGGCATCTGACCATGGATGCCTCTCCTTCAGGAAGTCTTCACCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | AAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCTaGGGCAGGGGCTGGGTGCTCATTCCAAGTTTGAGG | + |
Preference number: 3 (lower is better) Translates to: KPWWLTPKSQNC*GRGWVLIPSLR Trigger: CCTCAAACTTGGAATGAGCACCCAGCCCCTGCCCCAGCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR TCA 72 bp | ACCACAGAACACTCCCCACCAAGGCGTCTGGGGTGGTaGAGACTTCCTGAAGGAGAGGCATCCATGGTCAGA | + |
Preference number: 3 (lower is better) Translates to: TTEHSPPRRLGW*RLPEGEASMVR Trigger: TCTGACCATGGATGCCTCTCCTTCAGGAAGTCTTCACCACCCCAGACGCCTTGGTGGGGAGTGTTCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 72 bp | AGGAAGACGCTTCAGGGTTCACACTCTTCAGGGAAGTaGCAGGAGTCAGAAGAGCAGATGCAGGCTGAGCGA | + |
Preference number: 3 (lower is better) Translates to: RKTLQGSHSSGK*QESEEQMQAER Trigger: TCGCTCAGCCTGCATCTGCTCTTCTGACTCCTGGCACTTCCCTGAAGAGTGTGAACCCTGAAGCGTCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | AGAGAGGCCTTTGGGCAGCAAACTCCCCATCTGGGCTaGGAAAAATATGCATCACCTGGAATCCAGCCCAGG | + |
Preference number: 3 (lower is better) Translates to: REAFGQQTPHLG*EKYASPGIQPR Trigger: CCTGGGCTGGATTCCAGGTGATGCATATTTTTCCCAGCCCAGATGGGGAGTTTGCTGCCCAAAGGCCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | CAACTTTTCAATGTGGCTCTTCTCCCAGAGAGATGCTaGCAGCTTGTCGGGCTGAGGAGGGGCTTTCACCAG | + |
Preference number: 3 (lower is better) Translates to: QLFNVALLPERC*QLVGLRRGFHQ Trigger: CTGGTGAAAGCCCCTCCTCAGCCCGACAAGCTGCCAGCATCTCTCTGGGAGAAGAGCCACATTGAAAAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 72 bp | GGGTACAAGAACTTGCTGAGCTACGGCACTGGATGCTaGTTCCTATGTGTCTCCAGGACACAGAAGGTGAGG | + |
Preference number: 3 (lower is better) Translates to: GYKNLLSYGTGC*FLCVSRTQKVR Trigger: CCTCACCTTCTGTGTCCTGGAGACACATAGGAAGCAGCATCCAGTGCCGTAGCTCAGCAAGTTCTTGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 72 bp | TCTAGGAATGTGGATGGCTTACCAGCCTGGAAGAAGTaGCCCTCCCTTCTCCCCTGGGAAGGAATTCTCGTA | + |
Preference number: 3 (lower is better) Translates to: SRNVDGLPAWKK*PSLLPWEGILV Trigger: TACGAGAATTCCTTCCCAGGGGAGAAGGGAGGGGCACTTCTTCCAGGCTGGTAAGCCATCCACATTCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | AAATGGTTACCACAGAACACTCCCCACCAAGGCGTCTaGGGTGGTGAAGACTTCCTGAAGGAGAGGCATCCA | + |
Preference number: 3 (lower is better) Translates to: KWLPQNTPHQGV*GGEDFLKERHP Trigger: TGGATGCCTCTCCTTCAGGAAGTCTTCACCACCCCAGACGCCTTGGTGGGGAGTGTTCTGTGGTAACCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | ACTTCTTTGGCTTGTCCCAGTCAGACAGCTGCCTATTaGTCCAGCCTAACTGTCACCTTCCTTCCCAGCCAC | + |
Preference number: 3 (lower is better) Translates to: TSLACPSQTAAY*SSLTVTFLPSH Trigger: GTGGCTGGGAAGGAAGGTGACAGTTAGGCTGGACCAATAGGCAGCTGTCTGACTGGGACAAGCCAAAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | TATGTGGGAGAACCTGTCAGCAGGACTAACCTGAAGTaGGAACATGAGAACGAGGAAGCCGTGGTGGCTCAC | + |
Preference number: 3 (lower is better) Translates to: YVGEPVSRTNLK*EHENEEAVVAH Trigger: GTGAGCCACCACGGCTTCCTCGTTCTCATGTTCCCACTTCAGGTTAGTCCTGCTGACAGGTTCTCCCACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR-3UTR CAA 90 bp | GAGGGAGCACCACCCATTCCAGAAATAAAACCCAGCCTCTCACAGCTAAACCTCAAACCAGAGAGGCCTTaGGGCAGCAAACTCCCCATC | + |
Preference number: 3 (lower is better) Translates to: EGAPPIPEIKPSLSQLNLKPERP*GSKLPI Trigger: GATGGGGAGTTTGCTGCCCAAAGGCCTCTCTGGTTT...GAGGTTTAGCTGTGAGAGGCTGGGTTTTATTTCTGGAATGGGTGGTGCTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 72 bp | GATGGGTACAAGAACTTGCTGAGCTACGGCACTGGATaGTGCTTCCTATGTGTCTCCAGGACACAGAAGGTG | + |
Preference number: 3 (lower is better) Translates to: DGYKNLLSYGTG*CFLCVSRTQKV Trigger: CACCTTCTGTGTCCTGGAGACACATAGGAAGCAGCATCCAGTGCCGTAGCTCAGCAAGTTCTTGTACCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 72 bp | GCTCCCAACACAAAATCCTGTCCTGTGGCTGAAGTCTaGCCTACGACTCTATTAGATCTGGTAGGGTCAGGC | + |
Preference number: 3 (lower is better) Translates to: APNTKSCPVAEV*PTTLLDLVGSG Trigger: GCCTGACCCTACCAGATCTAATAGAGTCGTAGGGCAGACTTCAGCCACAGGACAGGATTTTGTGTTGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 72 bp | CCAGCCTGGCCTCGAACTCAGAGAACCACCTACCCCTaGCTCTCAAATGCTGGCATTAAAGTCACATACTAC | + |
Preference number: 3 (lower is better) Translates to: PAWPRTQRTTYP*LSNAGIKVTYY Trigger: GTAGTATGTGACTTTAATGCCAGCATTTGAGAGGCAGGGGTAGGTGGTTCTCTGAGTTCGAGGCCAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CCA 72 bp | AAACCAGAGAGGCCTTTGGGCAGCAAACTCCCCATCTaGGCTGGGAAAAATATGCATCACCTGGAATCCAGC | + |
Preference number: 3 (lower is better) Translates to: KPERPLGSKLPI*AGKNMHHLESS Trigger: GCTGGATTCCAGGTGATGCATATTTTTCCCAGCCCAGATGGGGAGTTTGCTGCCCAAAGGCCTCTCTGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | TTACCAGCCTGGAAGAAGTGCCCCTCCCTTCTCCCCTaGGAAGGAATTCTCGTAAACACAAGAGCTGGGATT | + |
Preference number: 3 (lower is better) Translates to: LPAWKKCPSLLP*EGILVNTRAGI Trigger: AATCCCAGCTCTTGTGTTTACGAGAATTCCTTCCCAGGGGAGAAGGGAGGGGCACTTCTTCCAGGCTGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | ATCTACAATTCTAGGAATGTGGATGGCTTACCAGCCTaGAAGAAGTGCCCCTCCCTTCTCCCCTGGGAAGGA | + |
Preference number: 3 (lower is better) Translates to: IYNSRNVDGLPA*KKCPSLLPWEG Trigger: TCCTTCCCAGGGGAGAAGGGAGGGGCACTTCTTCCAGGCTGGTAAGCCATCCACATTCCTAGAATTGTAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR CAA 90 bp | GAAGAAGTGCCCCTCCCTTCTCCCCTGGGAAGGAATTCTCGTAAACACAAGAGCCTGTCCAGTGGCAATTaGGAAAGTTCCATTGGAGGG | + |
Preference number: 3 (lower is better) Translates to: EEVPLPSPLGRNSRKHKSLSSGN*ESSIGG Trigger: CCCTCCAATGGAACTTTCCAAATTGCCACTGGACAG...GCTCTTGTGTTTACGAGAATTCCTTCCCAGGGGAGAAGGGAGGGGCACTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR TCA 72 bp | ACAACCCCAGCAGGTCCCTCCCGCACCTTTGTGTGGTaGCTGTTGGTGTTAGAGGAACAAAGCTTTAGTTGT | + |
Preference number: 3 (lower is better) Translates to: TTPAGPSRTFVW*LLVLEEQSFSC Trigger: ACAACTAAAGCTTTGTTCCTCTAACACCAACAGTCACCACACAAAGGTGCGGGAGGGACCTGCTGGGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR CAA 90 bp | AACTTGCTACACAGACCCATCCTATTCTGGGACAGGGTGACTTGGAGTCTGGGGTTGACAATGGAAGAATaGGGAGAATGTTGCCACTGG | + |
Preference number: 3 (lower is better) Translates to: NLLHRPILFWDRVTWSLGLTMEE*GECCHW Trigger: CCAGTGGCAACATTCTCCCAATTCTTCCATTGTCAA...CCCCAGACTCCAAGTCACCCTGTCCCAGAATAGGATGGGTCTGTGTAGCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | CGCACAATAAGATGGCTGCTCAGACATTCTGAGCCGTaGTCCTCAACTTTTCAATGTGGCTCTTCTCCCAGA | + |
Preference number: 3 (lower is better) Translates to: RTIRWLLRHSEP*SSTFQCGSSPR Trigger: TCTGGGAGAAGAGCCACATTGAAAAGTTGAGGACCACGGCTCAGAATGTCTGAGCAGCCATCTTATTGTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | CGCACAAGATACTCATCTAATGAGAGAGAGGAGAGATaGAGGACCCAGGTTCTCCATCTTCAGCACACGACA | + |
Preference number: 3 (lower is better) Translates to: RTRYSSNEREER*RTQVLHLQHTT Trigger: TGTCGTGTGCTGAAGATGGAGAACCTGGGTCCTCCATCTCTCCTCTCTCTCATTAGATGAGTATCTTGTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR-3UTR CAA 90 bp | CAGGACACAGAAGGTGAGGGAGCACCACCCATTCCAGAAATAAAACCCAGCCTCATTTGGAAAGTTCCATaGGAGGGGAATGAGAACGAT | + |
Preference number: 3 (lower is better) Translates to: QDTEGEGAPPIPEIKPSLIWKVP*EGNEND Trigger: ATCGTTCTCATTCCCCTCCAATGGAACTTTCCAAAT...GAGGCTGGGTTTTATTTCTGGAATGGGTGGTGCTCCCTCACCTTCTGTGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 72 bp | AGTAGGAAGGGGGTCTCAGCTCTTAAGTTTCTACACTaGGATTCCCTTGAGGAATGGGGGAACATCACAATG | + |
Preference number: 3 (lower is better) Translates to: SRKGVSALKFLH*DSLEEWGNITM Trigger: CATTGTGATGTTCCCCCATTCCTCAAGGGAATCGCAGTGTAGAAACTTAAGAGCTGAGACCCCCTTCCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR GCA 72 bp | CTGGGAAGGAATTCTCGTAAACACAAGAGCTGGGATTaGATCTTGGGGGAAATGACACCATTGGTTCCTTCC | + |
Preference number: 3 (lower is better) Translates to: LGRNSRKHKSWD*ILGEMTPLVPS Trigger: GGAAGGAACCAATGGTGTCATTTCCCCCAAGATGCAATCCCAGCTCTTGTGTTTACGAGAATTCCTTCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CCA 72 bp | CTGGACACTGTCCAGTGGCAATTTGGAAAGTTCCATTaGAGGGGAATGAGAACGATAGGAGGAGTGTCCAAA | + |
Preference number: 3 (lower is better) Translates to: LDTVQWQFGKFH*RGMRTIGGVSK Trigger: TTTGGACACTCCTCCTATCGTTCTCATTCCCCTCCAATGGAACTTTCCAAATTGCCACTGGACAGTGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CCA 72 bp | TTCTCAAATTTCCCATTTGTGTGTGACTTTGAGAACTaGGCGATGGTGGGAAGACCACCATGCGACTGTAGC | + |
Preference number: 3 (lower is better) Translates to: FSNFPFVCDFEN*AMVGRPPCDCS Trigger: GCTACAGTCGCATGGTGGTCTTCCCACCATCGCCCAGTTCTCAAAGTCACACACAAATGGGAAATTTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CAA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGACTAACTTCTTTGGCTaGTCCCAGTCAGACAGCTGC | + |
Preference number: 3 (lower is better) Translates to: SCPGGTDSLKLESHHSITTNFFG*SQSDSC Trigger: GCAGCTGTCTGACTGGGACAAGCCAAAGAAGTTAGT...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR-3UTR CAA 90 bp | AGTTCTGACTCTGGTGGCTTAAATATGATTGGAGAAGGTCAAGGTGAGACTCTGTACACTGCGATTCCCTaGAGGAATGGGGGAACATCA | + |
Preference number: 3 (lower is better) Translates to: SSDSGGLNMIGEGQGETLYTAIP*RNGGTS Trigger: TGATGTTCCCCCATTCCTCAAGGGAATCGCAGTGTA...CAGAGTCTCACCTTGACCTTCTCCAATCATATTTAAGCCACCAGAGTCAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR TCA 72 bp | TTCATAAGCTCCCAACACAAAATCCTGTCCTGTGGCTaGAGTCTGCCCTACGACTCTATTAGATCTGGTAGG | + |
Preference number: 3 (lower is better) Translates to: FISSQHKILSCG*SLPYDSIRSGR Trigger: CCTACCAGATCTAATAGAGTCGTAGGGCAGACTTCAGCCACAGGACAGGATTTTGTGTTGGGAGCTTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR TCA 72 bp | GCCACTGGCACCTACAGGATATTTACACTCCAGTTCTaGCTCTGGTGGCTTAAATATGATTGGAGAAGGTCA | + |
Preference number: 3 (lower is better) Translates to: ATGTYRIFTLQF*LWWLKYDWRRS Trigger: TGACCTTCTCCAATCATATTTAAGCCACCAGAGTCAGAACTGGAGTGTAAATATCCTGTAGGTGCCAGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR TCA 72 bp | TACTGGACTCCCTACCCAAATGGCCAAGGTCTCGAGTaGAATTTGGCTCCTGAGTCTCTAAGTATTCTTGAT | + |
Preference number: 3 (lower is better) Translates to: YWTPYPNGQGLE*NLAPESLSILD Trigger: ATCAAGAATACTTAGAGACTCAGGAGCCAAATTTCACTCGAGACCTTGGCCATTTGGGTAGGGAGTCCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR TCA 72 bp | CTGTGGTCTGCAGGCTGTAATACTTCTCTGTATTCATaGGCCCTGACATTCATAAGCTCCCAACACAAAATC | + |
Preference number: 3 (lower is better) Translates to: LWSAGCNTSLYS*ALTFISSQHKI Trigger: GATTTTGTGTTGGGAGCTTATGAATGTCAGGGCTCATGAATACAGAGAAGTATTACAGCCTGCAGACCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | CTTATTCAGTGTCCAGACTTGTTACCAAAGAAGAAGTaGAAACCTAAGGGTCACCTGGAAGCAAAACCAGAG | + |
Preference number: 3 (lower is better) Translates to: LIQCPDLLPKKK*KPKGHLEAKPE Trigger: CTCTGGTTTTGCTTCCAGGTGACCCTTAGGTTTCCACTTCTTCTTTGGTAACAAGTCTGGACACTGAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CCA 72 bp | GGTTTGACAATGGAAGAATTGGGAGAATGTTGCCACTaGCACCTACAGGATATTTACACTCCAGTTCTGACT | + |
Preference number: 3 (lower is better) Translates to: GLTMEELGECCH*HLQDIYTPVLT Trigger: AGTCAGAACTGGAGTGTAAATATCCTGTAGGTGCCAGTGGCAACATTCTCCCAATTCTTCCATTGTCAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR TCA 72 bp | CAATTTCATTGCTTTCTCCAGCTGCCCTGGAGGTACTaGCTCACTGAAATTAGAATCTCATCACAGCATAAC | + |
Preference number: 3 (lower is better) Translates to: QFHCFLQLPWRY*LTEIRISSQHN Trigger: GTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCTGGAGAAAGCAATGAAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR TCA 72 bp | TGGAAACCCAGATCACCATATACATATTCTTACAATTaGTCCTTAGTAGGCGCCTCCTGGGGTTTCCAAAGA | + |
Preference number: 3 (lower is better) Translates to: WKPRSPYTYSYN*SLVGASWGFQR Trigger: TCTTTGGAAACCCCAGGAGGCGCCTACTAAGGATCAATTGTAAGAATATGTATATGGTGATCTGGGTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR GCA 72 bp | GTTCCTTGCATAGACAATTTCATTGCTTTCTCCAGCTaGCCTGGAGGTACTGACTCACTGAAATTAGAATCT | + |
Preference number: 3 (lower is better) Translates to: VPCIDNFIAFSS*PGGTDSLKLES Trigger: AGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCTGGAGAAAGCAATGAAATTGTCTATGCAAGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CCA 72 bp | GCTCTTAAGTTTCTACACTGCGATTCCCTTGAGGAATaGGGGAACATCACAATGACCAACTGCAATTCAAAT | + |
Preference number: 3 (lower is better) Translates to: ALKFLHCDSLEE*GNITMTNCNSN Trigger: ATTTGAATTGCAGTTGGTCATTGTGATGTTCCCCCATTCCTCAAGGGAATCGCAGTGTAGAAACTTAAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | TTGGGGGAAATGACACCATTGGTTCCTTCCTTGGGTTaGAAATGTCTGAATTATACCAAGTTGTCAGAAAGC | + |
Preference number: 3 (lower is better) Translates to: LGEMTPLVPSLG*KCLNYTKLSES Trigger: GCTTTCTGACAACTTGGTATAATTCAGACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | AGTCAATGTTTCACAATCACGAGGCATAAAGGTACGTaGTTCGAAAACCAATCTCCAGGCAGATTCTTCTCA | + |
Preference number: 3 (lower is better) Translates to: SQCFTITRHKGT*FENQSPGRFFS Trigger: TGAGAAGAATCTGCCTGGAGATTGGTTTTCGAACCACGTACCTTTATGCCTCGTGATTGTGAAACATTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR TCA 72 bp | GGGACCTTAGAGATAGCACAGGAACTGTTGGTCCAATaGAACACCCACATTTTGAAGCAAACATATCTATTT | + |
Preference number: 3 (lower is better) Translates to: GTLEIAQELLVQ*NTHILKQTYLF Trigger: AAATAGATATGTTTGCTTCAAAATGTGGGTGTTTCATTGGACCAACAGTTCCTGTGCTATCTCTAAGGTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | AAGAGAAATATAACACTCAGTAGCAGGCTTTGTGTTTaGCTCTTATTCAGTGTCCAGACTTGTTACCAAAGA | + |
Preference number: 3 (lower is better) Translates to: KRNITLSSRLCV*LLFSVQTCYQR Trigger: TCTTTGGTAACAAGTCTGGACACTGAATAAGAGCCAAACACAAAGCCTGCTACTGAGTGTTATATTTCTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CCA 72 bp | TCAAATGCTGGCATTAAAGTCACATACTACCATTCCTaGCTCAGTCTTGACCATGTTTTCAAAGCTCTTAAA | + |
Preference number: 3 (lower is better) Translates to: SNAGIKVTYYHS*LSLDHVFKALK Trigger: TTTAAGAGCTTTGAAAACATGGTCAAGACTGAGCCAGGAATGGTAGTATGTGACTTTAATGCCAGCATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | TCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCCGCGTGGGTGGCGTACTaGGGGAGCCCGGGGCACCCA | + |
Preference number: 4 (lower is better) Translates to: SRPARRHPSFLPFCPPSPAWVAY*GSPGHP Trigger: TGGGTGCCCCGGGCTCCCCCAGTACGCCACCCACGC...GGGACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | GAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCTGGGGCAGGGATGGGGCGGGCGATGTaGTCTGCGCTGCACTCCACC | + |
Preference number: 4 (lower is better) Translates to: ERGSRGGSHRNPRTAGAGMGRAM*SALHST Trigger: GGTGGAGTGCAGCGCAGACCACATCGCCCGCCCCAT...CCCTGCCCCAGCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | GGGAACATGAGAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCGCGTGGGTGGCGTACTaGGGGAGCCCGGGGCACCCA | + |
Preference number: 4 (lower is better) Translates to: GNMRTRKPWWLTPKSQNCAWVAY*GSPGHP Trigger: TGGGTGCCCCGGGCTCCCCCAGTACGCCACCCACGC...GCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTCTCATGTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR GCA 90 bp | CCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCCCTGCGTGATGTGGTGCTaGAGCAGGCGCGATGCCACC | + |
Preference number: 4 (lower is better) Translates to: PALLVGTPVFFPSVLLVPCVMWC*SRRDAT Trigger: GGTGGCATCGCGCCTGCTGCAGCACCACATCACGCA...GGGGACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | CCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCCCCACTCCACCTCATCCTaGGACAGCCCGAGGAACTCC | + |
Preference number: 4 (lower is better) Translates to: PALLVGTPVFFPSVLLVPHSTSS*DSPRNS Trigger: GGAGTTCCTCGGGCTGTCTCAGGATGAGGTGGAGTG...GGGGACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | CCCAGCAGGTCCCTCCCGCACCTTTGTGTGGTGACTGTTGGTGTTAGAGGAACAGCCCCCGAGCCTGCGTaGCCGTCAAACAGGGACCAG | + |
Preference number: 4 (lower is better) Translates to: PSRSLPHLCVVTVGVRGTAPEPA*PSNRDQ Trigger: CTGGTCCCTGTTTGACGGTCACGCAGGCTCGGGGGC...TGTTCCTCTAACACCAACAGTCACCACACAAAGGTGCGGGAGGGACCTGCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | GGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCGCGGGCGATGTGGTCTaGGCTGCACTCCACCTCATC | + |
Preference number: 4 (lower is better) Translates to: GPALLVGTPVFFPSVLLVAGDVV*AALHLI Trigger: GATGAGGTGGAGTGCAGCGCAGACCACATCGCCCGC...GACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | GGGAACATGAGAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCTGCCGTGGGCTGGCGTaGTCTCTGGCTCCTCCCCCA | + |
Preference number: 4 (lower is better) Translates to: GNMRTRKPWWLTPKSQNCCRGLA*SLAPPP Trigger: TGGGGGAGGAGCCAGAGAGCACGCCAGCCCACGGCA...GCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTCTCATGTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | GGGAACATGAGAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCGAAGAAGCGCGTGGGTaGCGTACTGGGGGAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: GNMRTRKPWWLTPKSQNCEEARG*RTGGAR Trigger: CCGGGCTCCCCCAGTACGCCACCCACGCGCTTCTTC...GCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTCTCATGTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | ACTTGCTGTGTAGACCAGCCTGGCCTCGAACTCAGAGAACCACCTACCCCTGCCCCTGCAGCTGTTGCGTaGTGTGGTGCTGCAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: TCCVDQPGLELREPPTPAPAAVA*CGAAAG Trigger: GCCTGCTGCAGCACCACATCACGCAACAGCTGCAGG...GGCAGGGGTAGGTGGTTCTCTGAGTTCGAGGCCAGGCTGGTCTACACAGCAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | GGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCGCATCACCAGGTCCTaGGCCGCCAGTGTGTATCTG | + |
Preference number: 4 (lower is better) Translates to: GPALLVGTPVFFPSVLLVRITRS*AASVYL Trigger: CAGATACACACTGGCGGCTCAGGACCTGGTGATGCG...GACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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CDS-3UTR GCA 90 bp | ACTTGCTGTGTAGACCAGCCTGGCCTCGAACTCAGAGAACCACCTACCCCTGCCTGCGTGATGTGGTGCTaGAGCAGGCGCGATGCCACC | + |
Preference number: 4 (lower is better) Translates to: TCCVDQPGLELREPPTPACVMWC*SRRDAT Trigger: GGTGGCATCGCGCCTGCTGCAGCACCACATCACGCA...GGCAGGGGTAGGTGGTTCTCTGAGTTCGAGGCCAGGCTGGTCTACACAGCAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | CCCAGCAGGTCCCTCCCGCACCTTTGTGTGGTGACTGTTGGTGTTAGAGGAACAATGGGGCGGGCGATGTaGTCTGCGCTGCACTCCACC | + |
Preference number: 4 (lower is better) Translates to: PSRSLPHLCVVTVGVRGTMGRAM*SALHST Trigger: GGTGGAGTGCAGCGCAGACCACATCGCCCGCCCCAT...TGTTCCTCTAACACCAACAGTCACCACACAAAGGTGCGGGAGGGACCTGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | CCCGGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAACCTCGCAGCTGGCTTaGTCCTCATTGTGTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: PGPALLVGTPVFFPSVLLTSQLA*SSLCVL Trigger: GAGCACACACAATGAGGACCAAGCCAGCTGCGAGGT...TAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | AGCTGCTTTCTTCTAGGGCTTCCAGTTTCCCAGGGGGCTGTGAGGGCTATCTACGTTAGGGTCCTGCCGTaGGCTGGCGTGCTCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: SCFLLGLPVSQGAVRAIYVRVLP*AGVLSG Trigger: GCCAGAGAGCACGCCAGCCCACGGCAGGACCCTAAC...GTAGATAGCCCTCACAGCCCCCTGGGAAACTGGAAGCCCTAGAAGAAAGCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | GAACTGCTGGGGCAGGGGCTGGGTGCTCATTCCAAGTTTGAGGATACCCTGATCCACTCCACCTCATCCTaGGACAGCCCGAGGAACTCC | + |
Preference number: 4 (lower is better) Translates to: ELLGQGLGAHSKFEDTLIHSTSS*DSPRNS Trigger: GGAGTTCCTCGGGCTGTCTCAGGATGAGGTGGAGTG...GATCAGGGTATCCTCAAACTTGGAATGAGCACCCAGCCCCTGCCCCAGCAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | CCCGGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTACTTTCTTCTTCACTGTaGGCACCTCGCAGCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: PGPALLVGTPVFFPSVLLLSSSL*APRSWL Trigger: AAGCCAGCTGCGAGGTGCTCACAGTGAAGAAGAAAG...TAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | GGCCAGCAAGCACTCCATACTGGGACCTGTCTCAATCCCTCCCCCTACTCCCAAGGATCTTCTTCTCAGTaGAGAAGCGCGTGGGTGGCG | + |
Preference number: 4 (lower is better) Translates to: GQQALHTGTCLNPSPYSQGSSSQ*RSAWVA Trigger: CGCCACCCACGCGCTTCTTCACTGAGAAGAAGATCC...TTGGGAGTAGGGGGAGGGATTGAGACAGGTCCCAGTATGGAGTGCTTGCTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | CAAGCACTCCATACTGGGACCTGTCTCAATCCCTCCCCCTACTCCCAAGAGTTAAGAGGCAAACCACGATaGGGGCCGTGCAGCCGCCAG | + |
Preference number: 4 (lower is better) Translates to: QALHTGTCLNPSPYSQELRGKPR*GPCSRQ Trigger: CTGGCGGCTGCACGGCCCTCATCGTGGTTTGCCTCT...TAACTCTTGGGAGTAGGGGGAGGGATTGAGACAGGTCCCAGTATGGAGTGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | GGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCGCCAGTGTGTATCTGTaGGGGTCGTCTGGATCACAG | + |
Preference number: 4 (lower is better) Translates to: GPALLVGTPVFFPSVLLVASVYL*GSSGSQ Trigger: CTGTGATCCAGACGACCCTCACAGATACACACTGGC...GACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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CDS-3UTR GCA 90 bp | GAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCTGGGGCAGGGAGCATTAATAACCTCTaGGTAGCCAGTGGCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: ERGSRGGSHRNPRTAGAGSINNL*VASGPG Trigger: CCCTGGGCCACTGGCTACGCAGAGGTTATTAATGCT...CCCTGCCCCAGCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR GCA 90 bp | CCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCCCATCTCCACGATGTCCTaGAGCTGTTGCGTGATGTGG | + |
Preference number: 4 (lower is better) Translates to: PALLVGTPVFFPSVLLVPISTMS*SCCVMW Trigger: CCACATCACGCAACAGCTGCAGGACATCGTGGAGAT...GGGGACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | AGAAGTGGAAACCTAAGGGTCACCTGGAAGCAAAACCAGAGAGGCCTTTGGGCATGCCGTGGGCTGGCGTaGTCTCTGGCTCCTCCCCCA | + |
Preference number: 4 (lower is better) Translates to: RSGNLRVTWKQNQRGLWACRGLA*SLAPPP Trigger: TGGGGGAGGAGCCAGAGAGCACGCCAGCCCACGGCA...TGCCCAAAGGCCTCTCTGGTTTTGCTTCCAGGTGACCCTTAGGTTTCCACTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | CCCAGCAGGTCCCTCCCGCACCTTTGTGTGGTGACTGTTGGTGTTAGAGGAACAGGATCTTCTTCTCAGTaGAGAAGCGCGTGGGTGGCG | + |
Preference number: 4 (lower is better) Translates to: PSRSLPHLCVVTVGVRGTGSSSQ*RSAWVA Trigger: CGCCACCCACGCGCTTCTTCACTGAGAAGAAGATCC...TGTTCCTCTAACACCAACAGTCACCACACAAAGGTGCGGGAGGGACCTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | TCCTCTGAGGCTATTAGGGCAAGCAAGTCCAGCTGGAAGTCAGACAGGCATGATGTTAGGGTCCTGCCGTaGGCTGGCGTGCTCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: SSEAIRASKSSWKSDRHDVRVLP*AGVLSG Trigger: GCCAGAGAGCACGCCAGCCCACGGCAGGACCCTAAC...ATCATGCCTGTCTGACTTCCAGCTGGACTTGCTTGCCCTAATAGCCTCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | GGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCAGAAATGTCATCTCCTaGGCCCAGTCGGTCATTCGA | + |
Preference number: 4 (lower is better) Translates to: GPALLVGTPVFFPSVLLVRNVIS*AQSVIR Trigger: TCGAATGACCGACTGGGCTCAGGAGATGACATTTCT...GACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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CDS-3UTR GCA 90 bp | CGGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTATGACCAGACACTCGTaGGGGATCTTCTTCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: RSRPARRHPSFLPFCPPSMTRHS*GIFFSV Trigger: CACTGAGAAGAAGATCCCGCACGAGTGTCTGGTCAT...ACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | GAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCTGGGGCAGGGCGTCACTCCAATAGTTaGCATTACTCGGGCCTTCTT | + |
Preference number: 4 (lower is better) Translates to: ERGSRGGSHRNPRTAGAGRHSNS*HYSGLL Trigger: AAGAAGGCCCGAGTAATGGCAACTATTGGAGTGACG...CCCTGCCCCAGCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
||
CDS-3UTR CCA 90 bp | CCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCCCCCGCTACTTCTTCGTTaGATAAGACATCCCAGAGTC | + |
Preference number: 4 (lower is better) Translates to: PALLVGTPVFFPSVLLVPPLLLR*IRHPRV Trigger: GACTCTGGGATGTCTTATCCAACGAAGAAGTAGCGG...GGGGACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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3UTR CAA 72 bp | ACACATGACGCCACATTGCCACATAGCACCCGAAGATaGCCCAGAGAGGTGGGCTGTGGTCTGCAGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: THDATLPHSTRR*PREVGCGLQAV Trigger: TACAGCCTGCAGACCACAGCCCACCTCTCTGGGCAATCTTCGGGTGCTATGTGGCAATGTGGCGTCATGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | AAGCTCCCAACACAAAATCCTGTCCTGTGGCTGAAGTCTGCCCTACGACTCTATCCTGCAGCTGTTGCGTaGTGTGGTGCTGCAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: KLPTQNPVLWLKSALRLYPAAVA*CGAAAG Trigger: GCCTGCTGCAGCACCACATCACGCAACAGCTGCAGG...ATAGAGTCGTAGGGCAGACTTCAGCCACAGGACAGGATTTTGTGTTGGGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | CCCGGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTATCTGACCTCTGGAGCTaGAGACAGGAATGGTTTTAT | + |
Preference number: 4 (lower is better) Translates to: PGPALLVGTPVFFPSVLLSDLWS*RQEWFY Trigger: ATAAAACCATTCCTGTCTTCAGCTCCAGAGGTCAGA...TAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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CDS-3UTR TCA 90 bp | GGAGCACCACCCATTCCAGAAATAAAACCCAGCCTCTCACAGCTAAACCTCCAGCGCATCACCAGGTCCTaGGCCGCCAGTGTGTATCTG | + |
Preference number: 4 (lower is better) Translates to: GAPPIPEIKPSLSQLNLQRITRS*AASVYL Trigger: CAGATACACACTGGCGGCTCAGGACCTGGTGATGCG...CTGGAGGTTTAGCTGTGAGAGGCTGGGTTTTATTTCTGGAATGGGTGGTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | GATCTAGGCCAGCAAGCACTCCATACTGGGACCTGTCTCAATCCCTCCCCCTACATCTCCACGATGTCCTaGAGCTGTTGCGTGATGTGG | + |
Preference number: 4 (lower is better) Translates to: DLGQQALHTGTCLNPSPYISTMS*SCCVMW Trigger: CCACATCACGCAACAGCTGCAGGACATCGTGGAGAT...GTAGGGGGAGGGATTGAGACAGGTCCCAGTATGGAGTGCTTGCTGGCCTAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | TGCTTTCTTCTAGGGCTTCCAGTTTCCCAGGGGGCTGTGAGGGCTATCTACCCTACCTCGCAGCTGGCTTaGTCCTCATTGTGTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: CFLLGLPVSQGAVRAIYPTSQLA*SSLCVL Trigger: GAGCACACACAATGAGGACCAAGCCAGCTGCGAGGT...AGGGTAGATAGCCCTCACAGCCCCCTGGGAAACTGGAAGCCCTAGAAGAAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | CACTCCAGTTCTGACTCTGGTGGCTTAAATATGATTGGAGAAGGTCAAGGTGAGGAAGAAGCGCGTGGGTaGCGTACTGGGGGAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: HSSSDSGGLNMIGEGQGEEEARG*RTGGAR Trigger: CCGGGCTCCCCCAGTACGCCACCCACGCGCTTCTTC...CTCACCTTGACCTTCTCCAATCATATTTAAGCCACCAGAGTCAGAACTGGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
CDS-3UTR CCA 90 bp | GAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCTGGGGCAGGGCCTCTGCACTCTCCTTaGAAACTCCAAATGTGTGAA | + |
Preference number: 4 (lower is better) Translates to: ERGSRGGSHRNPRTAGAGPLHSP*KLQMCE Trigger: TTCACACATTTGGAGTTTCCAAGGAGAGTGCAGAGG...CCCTGCCCCAGCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | TGCTTTCTTCTAGGGCTTCCAGTTTCCCAGGGGGCTGTGAGGGCTATCTACCCTCTTTCTTCTTCACTGTaGGCACCTCGCAGCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: CFLLGLPVSQGAVRAIYPLSSSL*APRSWL Trigger: AAGCCAGCTGCGAGGTGCTCACAGTGAAGAAGAAAG...AGGGTAGATAGCCCTCACAGCCCCCTGGGAAACTGGAAGCCCTAGAAGAAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | TCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCCCAGTTAGGAAGAAACTaGGTGATTGCTTCCGCTACT | + |
Preference number: 4 (lower is better) Translates to: SRPARRHPSFLPFCPPSPQLGRN*VIASAT Trigger: AGTAGCGGAAGCAATCACTCAGTTTCTTCCTAACTG...GGGACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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CDS-3UTR GCA 90 bp | ACTAGCCAGATGGGTCTAGTCTCTGATCTGGACACTGTCCAGTGGCAATTTGGATGTTGCGTGATGTGGTaGTGCAGCAGGCGCGATGCC | + |
Preference number: 4 (lower is better) Translates to: TSQMGLVSDLDTVQWQFGCCVMW*CSRRDA Trigger: GGCATCGCGCCTGCTGCAGCACCACATCACGCAACA...TCCAAATTGCCACTGGACAGTGTCCAGATCAGAGACTAGACCCATCTGGCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | CAAGCACTCCATACTGGGACCTGTCTCAATCCCTCCCCCTACTCCCAAGAGTTAAGGTCGGGGGAAGGATaGCCGAGTTCTTCAGGATCT | + |
Preference number: 4 (lower is better) Translates to: QALHTGTCLNPSPYSQELRSGEG*PSSSGS Trigger: AGATCCTGAAGAACTCGGCCATCCTTCCCCCGACCT...TAACTCTTGGGAGTAGGGGGAGGGATTGAGACAGGTCCCAGTATGGAGTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | CAAGCACTCCATACTGGGACCTGTCTCAATCCCTCCCCCTACTCCCAAGAGTTATCATTTCCCAGCAAGTaGGGCTGCATGAACGCCAGG | + |
Preference number: 4 (lower is better) Translates to: QALHTGTCLNPSPYSQELSFPSK*GCMNAR Trigger: CCTGGCGTTCATGCAGCCCCACTTGCTGGGAAATGA...TAACTCTTGGGAGTAGGGGGAGGGATTGAGACAGGTCCCAGTATGGAGTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | TCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCCCCTCTGCACTCTCCTTaGAAACTCCAAATGTGTGAA | + |
Preference number: 4 (lower is better) Translates to: SRPARRHPSFLPFCPPSPPLHSP*KLQMCE Trigger: TTCACACATTTGGAGTTTCCAAGGAGAGTGCAGAGG...GGGACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | CGGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTTCTGTGAGGGTCGTCTaGATCACAGTTAGGAAGAAA | + |
Preference number: 4 (lower is better) Translates to: RSRPARRHPSFLPFCPPSSVRVV*ITVRKK Trigger: TTTCTTCCTAACTGTGATCCAGACGACCCTCACAGA...ACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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3UTR CAA 72 bp | TGCACACACACACACACTCACACACATGACGCCACATaGCCACATAGCACCCGAAGATTGCCCAGAGAGGTG | + |
Preference number: 4 (lower is better) Translates to: CTHTHTHTHDAT*PHSTRRLPREV Trigger: CACCTCTCTGGGCAATCTTCGGGTGCTATGTGGCAATGTGGCGTCATGTGTGTGAGTGTGTGTGTGTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | CTGTTGGTGTTAGAGGAACAAAGCTTTAGTTGTCACTTAGGAAGACGCTTCAGGAGAGGCAAACCACGATaGGGGCCGTGCAGCCGCCAG | + |
Preference number: 4 (lower is better) Translates to: LLVLEEQSFSCHLGRRFRRGKPR*GPCSRQ Trigger: CTGGCGGCTGCACGGCCCTCATCGTGGTTTGCCTCT...CCTGAAGCGTCTTCCTAAGTGACAACTAAAGCTTTGTTCCTCTAACACCAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | CCATCTAGGGGCATGATTTCCTTCAAGAAAGTGACTTTCAGGGGCGAGTGGTGGAGGTCGGGGGAAGGATaGCCGAGTTCTTCAGGATCT | + |
Preference number: 4 (lower is better) Translates to: PSRGMISFKKVTFRGEWWRSGEG*PSSSGS Trigger: AGATCCTGAAGAACTCGGCCATCCTTCCCCCGACCT...CCACCACTCGCCCCTGAAAGTCACTTTCTTGAAGGAAATCATGCCCCTAGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | GATCTAGGCCAGCAAGCACTCCATACTGGGACCTGTCTCAATCCCTCCCCCTACCCTGTGAGGGTCGTCTaGATCACAGTTAGGAAGAAA | + |
Preference number: 4 (lower is better) Translates to: DLGQQALHTGTCLNPSPYPVRVV*ITVRKK Trigger: TTTCTTCCTAACTGTGATCCAGACGACCCTCACAGG...GTAGGGGGAGGGATTGAGACAGGTCCCAGTATGGAGTGCTTGCTGGCCTAGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CAA 72 bp | GCTACACAGACCCATCCTATTCTGGGACAGGGTGACTaGGAGTCTGGGGTAACAATAAGGCCCACACAGAGT | + |
Preference number: 4 (lower is better) Translates to: ATQTHPILGQGD*ESGVTIRPTQS Trigger: ACTCTGTGTGGGCCTTATTGTTACCCCAGACTCCAAGTCACCCTGTCCCAGAATAGGATGGGTCTGTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 72 bp | AACTTCTTTGGCTTGTCCCAGTCAGACAGCTGCCTATaGGTCCAGCCTAACTGTCACCTTCCTTCCCAGCCA | + |
Preference number: 4 (lower is better) Translates to: NFFGLSQSDSCL*VQPNCHLPSQP Trigger: TGGCTGGGAAGGAAGGTGACAGTTAGGCTGGACCAATAGGCAGCTGTCTGACTGGGACAAGCCAAAGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | GGGAACATGAGAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCTCTGACCTCTGGAGCTaGAGACAGGAATGGTTTTAT | + |
Preference number: 4 (lower is better) Translates to: GNMRTRKPWWLTPKSQNCSDLWS*RQEWFY Trigger: ATAAAACCATTCCTGTCTTCAGCTCCAGAGGTCAGA...GCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTCTCATGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR GCA 90 bp | AACACATCATTTCTCGGTGTAGTAGCTGAAACTTTCCTGCCAGAGCTGCTTTCTGCGGGCGATGTGGTCTaGGCTGCACTCCACCTCATC | + |
Preference number: 4 (lower is better) Translates to: NTSFLGVVAETFLPELLSAGDVV*AALHLI Trigger: GATGAGGTGGAGTGCAGCGCAGACCACATCGCCCGC...AGAAAGCAGCTCTGGCAGGAAAGTTTCAGCTACTACACCGAGAAATGATGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR GCA 90 bp | CCCTTCCGTGGTTTGGTTTGCCGAGCTATTCCTACAGCCTCTGTTGTAAGTCATATGTCCTGCAGCTGTTaGGTGATGTGGTGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: PFRGLVCRAIPTASVVSHMSCSC*VMWCCS Trigger: GCTGCAGCACCACATCACGCAACAGCTGCAGGACAT...ATGACTTACAACAGAGGCTGTAGGAATAGCTCGGCAAACCAAACCACGGAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR GCA 90 bp | CGGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTAAGAAACTGAGTGATTaGTTCCGCTACTTCTTCGTT | + |
Preference number: 4 (lower is better) Translates to: RSRPARRHPSFLPFCPPSKKLSD*FRYFFV Trigger: AACGAAGAAGTAGCGGAAGCAATCACTCAGTTTCTT...ACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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CDS-3UTR GCA 90 bp | TCCTCTGAGGCTATTAGGGCAAGCAAGTCCAGCTGGAAGTCAGACAGGCATGATAGTAGTGGCAGGAGATaGCTTCGGACTCAGAGTTCT | + |
Preference number: 4 (lower is better) Translates to: SSEAIRASKSSWKSDRHDSSGRR*LRTQSS Trigger: AGAACTCTGAGTCCGAAGGCATCTCCTGCCACTACT...ATCATGCCTGTCTGACTTCCAGCTGGACTTGCTTGCCCTAATAGCCTCAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | GAAACTTTCCTGCCAGAGCTGCTTTCTTCTAGGGCTTCCAGTTTCCCAGGGGGCAGTCATCATCCTCAATaGTTTTGTATGCCCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: ETFLPELLSSRASSFPGGSHHPQ*FCMPSL Trigger: CAGGCTGGGCATACAAAACCATTGAGGATGATGACT...GCCCCCTGGGAAACTGGAAGCCCTAGAAGAAAGCAGCTCTGGCAGGAAAGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR GCA 90 bp | ACAGAGTTAAACCCAAAGCACAGAGCAATATCAGTGCTGGGCAGATCTGCCATGAGCATTAATAACCTCTaGGTAGCCAGTGGCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: TELNPKHRAISVLGRSAMSINNL*VASGPG Trigger: CCCTGGGCCACTGGCTACGCAGAGGTTATTAATGCT...CATGGCAGATCTGCCCAGCACTGATATTGCTCTGTGCTTTGGGTTTAACTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | CACTCCAGTTCTGACTCTGGTGGCTTAAATATGATTGGAGAAGGTCAAGGTGAGATGTCCTGCAGCTGTTaGGTGATGTGGTGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: HSSSDSGGLNMIGEGQGEMSCSC*VMWCCS Trigger: GCTGCAGCACCACATCACGCAACAGCTGCAGGACAT...CTCACCTTGACCTTCTCCAATCATATTTAAGCCACCAGAGTCAGAACTGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | CACTCCAGTTCTGACTCTGGTGGCTTAAATATGATTGGAGAAGGTCAAGGTGAGTCATTTCCCAGCAAGTaGGGCTGCATGAACGCCAGG | + |
Preference number: 4 (lower is better) Translates to: HSSSDSGGLNMIGEGQGESFPSK*GCMNAR Trigger: CCTGGCGTTCATGCAGCCCCACTTGCTGGGAAATGA...CTCACCTTGACCTTCTCCAATCATATTTAAGCCACCAGAGTCAGAACTGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | CCATCTAGGGGCATGATTTCCTTCAAGAAAGTGACTTTCAGGGGCGAGTGGTGGCCGCTACTTCTTCGTTaGATAAGACATCCCAGAGTC | + |
Preference number: 4 (lower is better) Translates to: PSRGMISFKKVTFRGEWWPLLLR*IRHPRV Trigger: GACTCTGGGATGTCTTATCCAACGAAGAAGTAGCGG...CCACCACTCGCCCCTGAAAGTCACTTTCTTGAAGGAAATCATGCCCCTAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | GAGGGAGCACCACCCATTCCAGAAATAAAACCCAGCCTCTCACAGCTAAACCTCTCTGACCTCTGGAGCTaGAGACAGGAATGGTTTTAT | + |
Preference number: 4 (lower is better) Translates to: EGAPPIPEIKPSLSQLNLSDLWS*RQEWFY Trigger: ATAAAACCATTCCTGTCTTCAGCTCCAGAGGTCAGA...GAGGTTTAGCTGTGAGAGGCTGGGTTTTATTTCTGGAATGGGTGGTGCTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | CATACTACCATTCCTGGCTCAGTCTTGACCATGTTTTCAAAGCTCTTAAAATGCTGTTGCGTGATGTGGTaGTGCAGCAGGCGCGATGCC | + |
Preference number: 4 (lower is better) Translates to: HTTIPGSVLTMFSKLLKCCCVMW*CSRRDA Trigger: GGCATCGCGCCTGCTGCAGCACCACATCACGCAACA...GCATTTTAAGAGCTTTGAAAACATGGTCAAGACTGAGCCAGGAATGGTAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CCA 90 bp | CTTATTCAGTGTCCAGACTTGTTACCAAAGAAGAAGTGGAAACCTAAGGGTCACAGCTGTTGCGTGATGTaGTGCTGCAGCAGGCGCGAT | + |
Preference number: 4 (lower is better) Translates to: LIQCPDLLPKKKWKPKGHSCCVM*CCSRRD Trigger: ATCGCGCCTGCTGCAGCACCACATCACGCAACAGCT...GTGACCCTTAGGTTTCCACTTCTTCTTTGGTAACAAGTCTGGACACTGAATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | GAGGGAGCACCACCCATTCCAGAAATAAAACCCAGCCTCTCACAGCTAAACCTCTCTGTGAGGGTCGTCTaGATCACAGTTAGGAAGAAA | + |
Preference number: 4 (lower is better) Translates to: EGAPPIPEIKPSLSQLNLSVRVV*ITVRKK Trigger: TTTCTTCCTAACTGTGATCCAGACGACCCTCACAGA...GAGGTTTAGCTGTGAGAGGCTGGGTTTTATTTCTGGAATGGGTGGTGCTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | CCATCTAGGGGCATGATTTCCTTCAAGAAAGTGACTTTCAGGGGCGAGTGGTGGGAAACTCCAAATGTGTaGACTCATTTCCCAGCAAGT | + |
Preference number: 4 (lower is better) Translates to: PSRGMISFKKVTFRGEWWETPNV*THFPAS Trigger: ACTTGCTGGGAAATGAGTTCACACATTTGGAGTTTC...CCACCACTCGCCCCTGAAAGTCACTTTCTTGAAGGAAATCATGCCCCTAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | CCCTTCCGTGGTTTGGTTTGCCGAGCTATTCCTACAGCCTCTGTTGTAAGTCATCAGTTAGGAAGAAACTaGGTGATTGCTTCCGCTACT | + |
Preference number: 4 (lower is better) Translates to: PFRGLVCRAIPTASVVSHQLGRN*VIASAT Trigger: AGTAGCGGAAGCAATCACTCAGTTTCTTCCTAACTG...ATGACTTACAACAGAGGCTGTAGGAATAGCTCGGCAAACCAAACCACGGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | CTTATTCAGTGTCCAGACTTGTTACCAAAGAAGAAGTGGAAACCTAAGGGTCACGCCAGTGTGTATCTGTaGGGGTCGTCTGGATCACAG | + |
Preference number: 4 (lower is better) Translates to: LIQCPDLLPKKKWKPKGHASVYL*GSSGSQ Trigger: CTGTGATCCAGACGACCCTCACAGATACACACTGGC...GTGACCCTTAGGTTTCCACTTCTTCTTTGGTAACAAGTCTGGACACTGAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR TCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGAGAAATGTCATCTCCTaGGCCCAGTCGGTCATTCGA | + |
Preference number: 4 (lower is better) Translates to: SCPGGTDSLKLESHHSITRNVIS*AQSVIR Trigger: TCGAATGACCGACTGGGCTCAGGAGATGACATTTCT...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | CCGTGGTCCTCAACTTTTCAATGTGGCTCTTCTCCCAGAGAGATGCTGGCAGCTAAGAAACTGAGTGATTaGTTCCGCTACTTCTTCGTT | + |
Preference number: 4 (lower is better) Translates to: PWSSTFQCGSSPREMLAAKKLSD*FRYFFV Trigger: AACGAAGAAGTAGCGGAAGCAATCACTCAGTTTCTT...AGCTGCCAGCATCTCTCTGGGAGAAGAGCCACATTGAAAAGTTGAGGACCACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | AACACATCATTTCTCGGTGTAGTAGCTGAAACTTTCCTGCCAGAGCTGCTTTCTATGACCAGACACTCGTaGGGGATCTTCTTCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: NTSFLGVVAETFLPELLSMTRHS*GIFFSV Trigger: CACTGAGAAGAAGATCCCGCACGAGTGTCTGGTCAT...AGAAAGCAGCTCTGGCAGGAAAGTTTCAGCTACTACACCGAGAAATGATGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR GCA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGCGTCACTCCAATAGTTaGCATTACTCGGGCCTTCTT | + |
Preference number: 4 (lower is better) Translates to: SCPGGTDSLKLESHHSITRHSNS*HYSGLL Trigger: AAGAAGGCCCGAGTAATGGCAACTATTGGAGTGACG...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 72 bp | TCAACACTTTCTCAAATTTCCCATTTGTGTGTGACTTaGAGAACTGGGCGATGGTGGGAAGACCACCATGCG | + |
Preference number: 4 (lower is better) Translates to: STLSQISHLCVT*RTGRWWEDHHA Trigger: CGCATGGTGGTCTTCCCACCATCGCCCAGTTCTCAAAGTCACACACAAATGGGAAATTTGAGAAAGTGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | CCCTTCCGTGGTTTGGTTTGCCGAGCTATTCCTACAGCCTCTGTTGTAAGTCATAAGAAACTGAGTGATTaGTTCCGCTACTTCTTCGTT | + |
Preference number: 4 (lower is better) Translates to: PFRGLVCRAIPTASVVSHKKLSD*FRYFFV Trigger: AACGAAGAAGTAGCGGAAGCAATCACTCAGTTTCTT...ATGACTTACAACAGAGGCTGTAGGAATAGCTCGGCAAACCAAACCACGGAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | ATACTTATTTATATTTTTGCTAACAAATCCAGCACGGGCATGTTTGTCAGGCCGAAAGGCACAAACCTGTaGGGGTCGTCTGGATCACAG | + |
Preference number: 4 (lower is better) Translates to: ILIYIFANKSSTGMFVRPKGTNL*GSSGSQ Trigger: CTGTGATCCAGACGACCCTCACAGGTTTGTGCCTTT...CGGCCTGACAAACATGCCCGTGCTGGATTTGTTAGCAAAAATATAAATAAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CAA 72 bp | CAGGCTTTGTGTTTGGCTCTTATTCAGTGTCCAGACTaGTTACCAAAGAAGAAGTGGAAACCTAAGGGTCAC | + |
Preference number: 4 (lower is better) Translates to: QALCLALIQCPD*LPKKKWKPKGH Trigger: GTGACCCTTAGGTTTCCACTTCTTCTTTGGTAACAAGTCTGGACACTGAATAAGAGCCAAACACAAAGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CAA 72 bp | CCTTCCTTGGGTTGGAAATGTCTGAATTATACCAAGTaGTCAGAAAGCCGATATCCTGGAAGACTACGGGAA | + |
Preference number: 4 (lower is better) Translates to: PSLGWKCLNYTK*SESRYPGRLRE Trigger: TTCCCGTAGTCTTCCAGGATATCGGCTTTCTGACAACTTGGTATAATTCAGACATTTCCAACCCAAGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 72 bp | AAGAGCTGGGATTGCATCTTGGGGGAAATGACACCATaGGTTCCTTCCTTGGGTTGGAAATGTCTGAATTAT | + |
Preference number: 4 (lower is better) Translates to: KSWDCILGEMTP*VPSLGWKCLNY Trigger: ATAATTCAGACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAAGATGCAATCCCAGCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
||
3UTR CAA 72 bp | ACACACCGAAATACATTTTGCAGAATTCTGAGTGTGTaGTTTCTTTGGCCTTCCCAGGAATTCTCCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: THRNTFCRILSV*FLWPSQEFSKG Trigger: GCCCTTGGAGAATTCCTGGGAAGGCCAAAGAAACAACACACTCAGAATTCTGCAAAATGTATTTCGGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | CTTATTCAGTGTCCAGACTTGTTACCAAAGAAGAAGTGGAAACCTAAGGGTCACAGTCATCATCCTCAATaGTTTTGTATGCCCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: LIQCPDLLPKKKWKPKGHSHHPQ*FCMPSL Trigger: CAGGCTGGGCATACAAAACCATTGAGGATGATGACT...GTGACCCTTAGGTTTCCACTTCTTCTTTGGTAACAAGTCTGGACACTGAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 72 bp | CTTGGGGGAAATGACACCATTGGTTCCTTCCTTGGGTaGGAAATGTCTGAATTATACCAAGTTGTCAGAAAG | + |
Preference number: 4 (lower is better) Translates to: LGGNDTIGSFLG*EMSELYQVVRK Trigger: CTTTCTGACAACTTGGTATAATTCAGACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 72 bp | TGCATCTTGGGGGAAATGACACCATTGGTTCCTTCCTaGGGTTGGAAATGTCTGAATTATACCAAGTTGTCA | + |
Preference number: 4 (lower is better) Translates to: CILGEMTPLVPS*GWKCLNYTKLS Trigger: TGACAACTTGGTATAATTCAGACATTTCCAACCCAAGGAAGGAACCAATGGTGTCATTTCCCCCAAGATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 72 bp | CAGATTTGGTTTGACAATGGAAGAATTGGGAGAATGTaGCCACTGGCACCTACAGGATATTTACACTCCAGT | + |
Preference number: 4 (lower is better) Translates to: QIWFDNGRIGRM*PLAPTGYLHSS Trigger: ACTGGAGTGTAAATATCCTGTAGGTGCCAGTGGCAACATTCTCCCAATTCTTCCATTGTCAAACCAAATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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3UTR CAA 72 bp | TTGGAAACCCAGATCACCATATACATATTCTTACAATaGATCCTTAGTAGGCGCCTCCTGGGGTTTCCAAAG | + |
Preference number: 4 (lower is better) Translates to: LETQITIYIFLQ*ILSRRLLGFPK Trigger: CTTTGGAAACCCCAGGAGGCGCCTACTAAGGATCAATTGTAAGAATATGTATATGGTGATCTGGGTTTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CCA 90 bp | TTCTTTGTCATCTGTATCTTGGTTCACCTTAAGGAGGATTTTCACATGGTCACACCGCTACTTCTTCGTTaGATAAGACATCCCAGAGTC | + |
Preference number: 4 (lower is better) Translates to: FFVICILVHLKEDFHMVTPLLLR*IRHPRV Trigger: GACTCTGGGATGTCTTATCCAACGAAGAAGTAGCGG...TGTGACCATGTGAAAATCCTCCTTAAGGTGAACCAAGATACAGATGACAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CAA 72 bp | AAATTCACTTTAATTCAAGTGTCATCCCAGATACCCTaGCACAAAGGTGACAGGAAGAGAGTAGTCACTGCT | + |
Preference number: 4 (lower is better) Translates to: KFTLIQVSSQIP*HKGDRKRVVTA Trigger: AGCAGTGACTACTCTCTTCCTGTCACCTTTGTGCAAGGGTATCTGGGATGACACTTGAATTAAAGTGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | CTGTTGGTGTTAGAGGAACAAAGCTTTAGTTGTCACTTAGGAAGACGCTTCAGGCTCAATGGTTTTGTATaGCCAGCCTGTCATATTAAA | + |
Preference number: 4 (lower is better) Translates to: LLVLEEQSFSCHLGRRFRLNGFV*PACHIK Trigger: TTTAATATGACAGGCTGGGCATACAAAACCATTGAG...CCTGAAGCGTCTTCCTAAGTGACAACTAAAGCTTTGTTCCTCTAACACCAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR GCA 90 bp | AACACATCATTTCTCGGTGTAGTAGCTGAAACTTTCCTGCCAGAGCTGCTTTCTCTCAATGGTTTTGTATaGCCAGCCTGTCATATTAAA | + |
Preference number: 4 (lower is better) Translates to: NTSFLGVVAETFLPELLSLNGFV*PACHIK Trigger: TTTAATATGACAGGCTGGGCATACAAAACCATTGAG...AGAAAGCAGCTCTGGCAGGAAAGTTTCAGCTACTACACCGAGAAATGATGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR TCA 90 bp | TTCTTTGTCATCTGTATCTTGGTTCACCTTAAGGAGGATTTTCACATGGTCACAGAAACTCCAAATGTGTaGACTCATTTCCCAGCAAGT | + |
Preference number: 4 (lower is better) Translates to: FFVICILVHLKEDFHMVTETPNV*THFPAS Trigger: ACTTGCTGGGAAATGAGTTCACACATTTGGAGTTTC...TGTGACCATGTGAAAATCCTCCTTAAGGTGAACCAAGATACAGATGACAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
||
3UTR CAA 72 bp | GCATTAAAGTCACATACTACCATTCCTGGCTCAGTCTaGACCATGTTTTCAAAGCTCTTAAAATGCTCCGAT | + |
Preference number: 4 (lower is better) Translates to: ALKSHTTIPGSV*TMFSKLLKCSD Trigger: ATCGGAGCATTTTAAGAGCTTTGAAAACATGGTCAAGACTGAGCCAGGAATGGTAGTATGTGACTTTAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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3UTR CAA 72 bp | TTGTTTGTTTGTTTGTTTAAGATTTTGATTTATTTTTaGCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTC | + |
Preference number: 4 (lower is better) Translates to: LFVCLFKILIYF*QTGFLCVALAV Trigger: GACAGCCAGGGCTACACAGAGAAACCCTGTCTGCAAAAAATAAATCAAAATCTTAAACAAACAAACAAACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS GCA 90 bp | GGGAAGCGCAGGGGCAGGTCCGAGCCTCCGCAGCCGCTCCCGCCGTaGTCGGAGCCGGAGCTGCCAGCCATGATGCCGCCCATGAAATTG | + |
Preference number: 5 (lower is better) Translates to: GKRRGRSEPPQPLPP*SEPELPAMMPPMKL Trigger: CAATTTCATGGGCGGCATCATGGCTGGCAGCTCCGGCTCCGAGCACGGCGGGAGCGGCTGCGGAGGCTCGGACCTGCCCCTGCGCTTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS TCA 90 bp | AGGATGGGGCGGGCGATGTGGTCTGCGCTGCACTCCACCTCATCCTaGGACAGCCCGAGGAACTCCGGCCGCCCGTACGGGAAGCGCAGG | + |
Preference number: 5 (lower is better) Translates to: RMGRAMWSALHSTSS*DSPRNSGRPYGKRR Trigger: CCTGCGCTTCCCGTACGGGCGGCCGGAGTTCCTCGGGCTGTCTCAGGATGAGGTGGAGTGCAGCGCAGACCACATCGCCCGCCCCATCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 90 bp | GATGTCCTGCAGCTGTTGCGTGATGTGGTGCTGCAGCAGGCGCGATaGCACCACGGCAGCCCCCGAGCCTGCGTGACCGTCAAACAGGGA | + |
Preference number: 5 (lower is better) Translates to: DVLQLLRDVVLQQAR*HHGSPRACVTVKQG Trigger: TCCCTGTTTGACGGTCACGCAGGCTCGGGGGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS TCA 90 bp | TGGCCGAGTTCTTCAGGATCTCCACGATGTCCTGCAGCTGTTGCGTaGTGTGGTGCTGCAGCAGGCGCGATGCCACCACGGCAGCCCCCG | + |
Preference number: 5 (lower is better) Translates to: WPSSSGSPRCPAAVA*CGAAAGAMPPRQPP Trigger: CGGGGGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGAACTCGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 90 bp | TTCTTCAGGATCTCCACGATGTCCTGCAGCTGTTGCGTGATGTGGTaGTGCAGCAGGCGCGATGCCACCACGGCAGCCCCCGAGCCTGCG | + |
Preference number: 5 (lower is better) Translates to: FFRISTMSCSCCVMW*CSRRDATTAAPEPA Trigger: CGCAGGCTCGGGGGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CCA 90 bp | GAGTTCTTCAGGATCTCCACGATGTCCTGCAGCTGTTGCGTGATGTaGTGCTGCAGCAGGCGCGATGCCACCACGGCAGCCCCCGAGCCT | + |
Preference number: 5 (lower is better) Translates to: EFFRISTMSCSCCVM*CCSRRDATTAAPEP Trigger: AGGCTCGGGGGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGAACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 90 bp | AGGATGGCCGAGTTCTTCAGGATCTCCACGATGTCCTGCAGCTGTTaGGTGATGTGGTGCTGCAGCAGGCGCGATGCCACCACGGCAGCC | + |
Preference number: 5 (lower is better) Translates to: RMAEFFRISTMSCSC*VMWCCSRRDATTAA Trigger: GGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGAACTCGGCCATCCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 90 bp | GTCGGGGGAAGGATGGCCGAGTTCTTCAGGATCTCCACGATGTCCTaGAGCTGTTGCGTGATGTGGTGCTGCAGCAGGCGCGATGCCACC | + |
Preference number: 5 (lower is better) Translates to: VGGRMAEFFRISTMS*SCCVMWCCSRRDAT Trigger: GGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGAACTCGGCCATCCTTCCCCCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | TGCTTTCTTCTAGGGCTTCCAGTTTCCCAGGGGGCTGTGAGGGCTATCTACCCTAGCCGCCGGGTCTCCTaGAGGATGAGGATGGGGCGG | + |
Preference number: 5 (lower is better) Translates to: CFLLGLPVSQGAVRAIYPSRRVS*RMRMGR Trigger: CCGCCCCATCCTCATCCTCAAGGAGACCCGGCGGCT...AGGGTAGATAGCCCTCACAGCCCCCTGGGAAACTGGAAGCCCTAGAAGAAAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | CCCGGTCCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTACACCTCGCAGCTGGCTaGGTCCTCATTGTGTGTGCT | + |
Preference number: 5 (lower is better) Translates to: PGPALLVGTPVFFPSVLLHLAAG*VLIVCA Trigger: AGCACACACAATGAGGACCAAGCCAGCTGCGAGGTG...TAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGGACCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS TCA 90 bp | CGCCAGCATTCGCCACATAGAGCTTCCCCAAGAGGCAAACCACGATaGGGGCCGTGCAGCCGCCAGATATATTATACGCACTCCTCTCGC | + |
Preference number: 5 (lower is better) Translates to: RQHSPHRASPRGKPR*GPCSRQIYYTHSSR Trigger: GCGAGAGGAGTGCGTATAATATATCTGGCGGCTGCACGGCCCTCATCGTGGTTTGCCTCTTGGGGAAGCTCTATGTGGCGAATGCTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 90 bp | ATTTCCTTGAAAGCGCTCTCCAGGGCCCCGATGACCAGACACTCGTaGGGGATCTTCTTCTCAGTGAAGAAGCGCGTGGGTGGCGTACTG | + |
Preference number: 5 (lower is better) Translates to: ISLKALSRAPMTRHS*GIFFSVKKRVGGVL Trigger: CAGTACGCCACCCACGCGCTTCTTCACTGAGAAGAAGATCCCGCACGAGTGTCTGGTCATCGGGGCCCTGGAGAGCGCTTTCAAGGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | CCCGCCCTGCTCGTAGGCACCCCAGTTTTCTTCCCTTCTGTCCTCCTAGTCCCCTCCGCTACTTCTTCGTaGGATAAGACATCCCAGAGT | + |
Preference number: 5 (lower is better) Translates to: PALLVGTPVFFPSVLLVPSATSS*DKTSQS Trigger: ACTCTGGGATGTCTTATCCAACGAAGAAGTAGCGGA...GGGGACTAGGAGGACAGAAGGGAAGAAAACTGGGGTGCCTACGAGCAGGGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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CDS-3UTR CAA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGAGCCGCCGGGTCTCCTaGAGGATGAGGATGGGGCGG | + |
Preference number: 5 (lower is better) Translates to: SCPGGTDSLKLESHHSITSRRVS*RMRMGR Trigger: CCGCCCCATCCTCATCCTCAAGGAGACCCGGCGGCT...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS CCA 90 bp | TGCCTTCGGACTCAGAGTTCTCCTTTAACTGCAGGCCTTCCCCGTTaGGAAGTGATGACCTTCTCTTGGAGTTTCTGTTCGGGGTGGAAG | + |
Preference number: 5 (lower is better) Translates to: CLRTQSSPLTAGLPR*EVMTFSWSFCSGWK Trigger: CTTCCACCCCGAACAGAAACTCCAAGAGAAGGTCATCACTTCCCAACGGGGAAGGCCTGCAGTTAAAGGAGAACTCTGAGTCCGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | GAAGAAGTGCCCCTCCCTTCTCCCCTGGGAAGGAATTCTCGTAAACACAAGAGCATGCCGCCCATGAAATaGGCCACGGCAGATTTCACT | + |
Preference number: 5 (lower is better) Translates to: EEVPLPSPLGRNSRKHKSMPPMK*ATADFT Trigger: AGTGAAATCTGCCGTGGCCAATTTCATGGGCGGCAT...GCTCTTGTGTTTACGAGAATTCCTTCCCAGGGGAGAAGGGAGGGGCACTTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CAA 90 bp | GGGAACATGAGAACGAGGAAGCCGTGGTGGCTCACACCGAAATCCCAGAACTGCTCATCCTCAATGGTTTaGTATGCCCAGCCTGTCATA | + |
Preference number: 5 (lower is better) Translates to: GNMRTRKPWWLTPKSQNCSSSMV*YAQPVI Trigger: TATGACAGGCTGGGCATACAAAACCATTGAGGATGA...GCAGTTCTGGGATTTCGGTGTGAGCCACCACGGCTTCCTCGTTCTCATGTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | AGCTGCTTTCTTCTAGGGCTTCCAGTTTCCCAGGGGGCTGTGAGGGCTATCTACTCCGCTACTTCTTCGTaGGATAAGACATCCCAGAGT | + |
Preference number: 5 (lower is better) Translates to: SCFLLGLPVSQGAVRAIYSATSS*DKTSQS Trigger: ACTCTGGGATGTCTTATCCAACGAAGAAGTAGCGGA...GTAGATAGCCCTCACAGCCCCCTGGGAAACTGGAAGCCCTAGAAGAAAGCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | AGCTGCCCTGGAGGTACTGACTCACTGAAATTAGAATCTCATCACAGCATAACGGATGTCCTGCAGCTGTaGCGTGATGTGGTGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: SCPGGTDSLKLESHHSITDVLQL*RDVVLQ Trigger: CTGCAGCACCACATCACGCAACAGCTGCAGGACATC...CGTTATGCTGTGATGAGATTCTAATTTCAGTGAGTCAGTACCTCCAGGGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CAA 90 bp | AGCTGCTTTCTTCTAGGGCTTCCAGTTTCCCAGGGGGCTGTGAGGGCTATCTACATTACTCGGGCCTTCTaGCCTTCTCCATATATAAGG | + |
Preference number: 5 (lower is better) Translates to: SCFLLGLPVSQGAVRAIYITRAF*PSPYIR Trigger: CCTTATATATGGAGAAGGCAAGAAGGCCCGAGTAAT...GTAGATAGCCCTCACAGCCCCCTGGGAAACTGGAAGCCCTAGAAGAAAGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | CAGGACACAGAAGGTGAGGGAGCACCACCCATTCCAGAAATAAAACCCAGCCTCTCATCCTCAATGGTTTaGTATGCCCAGCCTGTCATA | + |
Preference number: 5 (lower is better) Translates to: QDTEGEGAPPIPEIKPSLSSSMV*YAQPVI Trigger: TATGACAGGCTGGGCATACAAAACCATTGAGGATGA...GAGGCTGGGTTTTATTTCTGGAATGGGTGGTGCTCCCTCACCTTCTGTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS-3UTR CAA 90 bp | CATACTACCATTCCTGGCTCAGTCTTGACCATGTTTTCAAAGCTCTTAAAATGCGATGTCCTGCAGCTGTaGCGTGATGTGGTGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: HTTIPGSVLTMFSKLLKCDVLQL*RDVVLQ Trigger: CTGCAGCACCACATCACGCAACAGCTGCAGGACATC...GCATTTTAAGAGCTTTGAAAACATGGTCAAGACTGAGCCAGGAATGGTAGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | ACAGAGTTAAACCCAAAGCACAGAGCAATATCAGTGCTGGGCAGATCTGCCATGTCCGCTACTTCTTCGTaGGATAAGACATCCCAGAGT | + |
Preference number: 5 (lower is better) Translates to: TELNPKHRAISVLGRSAMSATSS*DKTSQS Trigger: ACTCTGGGATGTCTTATCCAACGAAGAAGTAGCGGA...CATGGCAGATCTGCCCAGCACTGATATTGCTCTGTGCTTTGGGTTTAACTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS TCA 90 bp | TCCGTGCTCATATCTGGAGAGATCGTAGACTCTGACCTCTGGAGCTaGAGACAGGAATGGTTTTATGTAGATGTTGGAGTCATGAACCTT | + |
Preference number: 5 (lower is better) Translates to: SVLISGEIVDSDLWS*RQEWFYVDVGVMNL Trigger: AAGGTTCATGACTCCAACATCTACATAAAACCATTCCTGTCTTCAGCTCCAGAGGTCAGAGTCTACGATCTCTCCAGATATGAGCACGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 ENSMUST00000162969.2 |
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CDS-3UTR CAA 90 bp | CATACTACCATTCCTGGCTCAGTCTTGACCATGTTTTCAAAGCTCTTAAAATGCATGCCGCCCATGAAATaGGCCACGGCAGATTTCACT | + |
Preference number: 5 (lower is better) Translates to: HTTIPGSVLTMFSKLLKCMPPMK*ATADFT Trigger: AGTGAAATCTGCCGTGGCCAATTTCATGGGCGGCAT...GCATTTTAAGAGCTTTGAAAACATGGTCAAGACTGAGCCAGGAATGGTAGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161487.8 |
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CDS-3UTR CAA 90 bp | CTTATTCAGTGTCCAGACTTGTTACCAAAGAAGAAGTGGAAACCTAAGGGTCACATTACTCGGGCCTTCTaGCCTTCTCCATATATAAGG | + |
Preference number: 5 (lower is better) Translates to: LIQCPDLLPKKKWKPKGHITRAF*PSPYIR Trigger: CCTTATATATGGAGAAGGCAAGAAGGCCCGAGTAAT...GTGACCCTTAGGTTTCCACTTCTTCTTTGGTAACAAGTCTGGACACTGAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067918.12 |
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CDS GCA 72 bp | AGGGGCAGGTCCGAGCCTCCGCAGCCGCTCCCGCCGTaGTCGGAGCCGGAGCTGCCAGCCATGATGCCGCCC | + |
Preference number: 6 (lower is better) Translates to: RGRSEPPQPLPP*SEPELPAMMPP Trigger: GGGCGGCATCATGGCTGGCAGCTCCGGCTCCGAGCACGGCGGGAGCGGCTGCGGAGGCTCGGACCTGCCCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS TCA 72 bp | CGGGCGATGTGGTCTGCGCTGCACTCCACCTCATCCTaGGACAGCCCGAGGAACTCCGGCCGCCCGTACGGG | + |
Preference number: 6 (lower is better) Translates to: RAMWSALHSTSS*DSPRNSGRPYG Trigger: CCCGTACGGGCGGCCGGAGTTCCTCGGGCTGTCTCAGGATGAGGTGGAGTGCAGCGCAGACCACATCGCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 72 bp | CAGCTGTTGCGTGATGTGGTGCTGCAGCAGGCGCGATaGCACCACGGCAGCCCCCGAGCCTGCGTGACCGTC | + |
Preference number: 6 (lower is better) Translates to: QLLRDVVLQQAR*HHGSPRACVTV Trigger: GACGGTCACGCAGGCTCGGGGGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 72 bp | TCCACGATGTCCTGCAGCTGTTGCGTGATGTGGTGCTaGAGCAGGCGCGATGCCACCACGGCAGCCCCCGAG | + |
Preference number: 6 (lower is better) Translates to: STMSCSCCVMWC*SRRDATTAAPE Trigger: CTCGGGGGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CCA 72 bp | GTGCGGGATCTTCTTCTCAGTGAAGAAGCGCGTGGGTaGCGTACTGGGGGAGCCCGGGGCACCCACACCTCC | + |
Preference number: 6 (lower is better) Translates to: VRDLLLSEEARG*RTGGARGTHTS Trigger: GGAGGTGTGGGTGCCCCGGGCTCCCCCAGTACGCCACCCACGCGCTTCTTCACTGAGAAGAAGATCCCGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 72 bp | ATCTCCACGATGTCCTGCAGCTGTTGCGTGATGTGGTaGTGCAGCAGGCGCGATGCCACCACGGCAGCCCCC | + |
Preference number: 6 (lower is better) Translates to: ISTMSCSCCVMW*CSRRDATTAAP Trigger: GGGGGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CCA 72 bp | AGGATCTCCACGATGTCCTGCAGCTGTTGCGTGATGTaGTGCTGCAGCAGGCGCGATGCCACCACGGCAGCC | + |
Preference number: 6 (lower is better) Translates to: RISTMSCSCCVM*CCSRRDATTAA Trigger: GGCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CAA 90 bp | AAGGATGGCCGAGTTCTTCAGGATCTCCACGATGTCCTGCAGCTGTaGCGTGATGTGGTGCTGCAGCAGGCGCGATGCCACCACGGCAGC | + |
Preference number: 6 (lower is better) Translates to: KDGRVLQDLHDVLQL*RDVVLQQARCHHGS Trigger: GCTGCCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGAACTCGGCCATCCTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS TCA 72 bp | TCTTCAGGATCTCCACGATGTCCTGCAGCTGTTGCGTaGTGTGGTGCTGCAGCAGGCGCGATGCCACCACGG | + |
Preference number: 6 (lower is better) Translates to: SSGSPRCPAAVA*CGAAAGAMPPR Trigger: CCGTGGTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 72 bp | AGGATGGCCGAGTTCTTCAGGATCTCCACGATGTCCTaGAGCTGTTGCGTGATGTGGTGCTGCAGCAGGCGC | + |
Preference number: 6 (lower is better) Translates to: RMAEFFRISTMS*SCCVMWCCSRR Trigger: GCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGAACTCGGCCATCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 72 bp | AAAGCGCTCTCCAGGGCCCCGATGACCAGACACTCGTaGGGGATCTTCTTCTCAGTGAAGAAGCGCGTGGGT | + |
Preference number: 6 (lower is better) Translates to: KALSRAPMTRHS*GIFFSVKKRVG Trigger: ACCCACGCGCTTCTTCACTGAGAAGAAGATCCCGCACGAGTGTCTGGTCATCGGGGCCCTGGAGAGCGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CAA 72 bp | CGAGTTCTTCAGGATCTCCACGATGTCCTGCAGCTGTaGCGTGATGTGGTGCTGCAGCAGGCGCGATGCCAC | + |
Preference number: 6 (lower is better) Translates to: RVLQDLHDVLQL*RDVVLQQARCH Trigger: GTGGCATCGCGCCTGCTGCAGCACCACATCACGCAACAGCTGCAGGACATCGTGGAGATCCTGAAGAACTCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS TCA 72 bp | TCGCCACATAGAGCTTCCCCAAGAGGCAAACCACGATaGGGGCCGTGCAGCCGCCAGATATATTATACGCAC | + |
Preference number: 6 (lower is better) Translates to: SPHRASPRGKPR*GPCSRQIYYTH Trigger: GTGCGTATAATATATCTGGCGGCTGCACGGCCCTCATCGTGGTTTGCCTCTTGGGGAAGCTCTATGTGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 72 bp | CGTGACCGTCAAACAGGGACCAGTAGTGGCAGGAGATaGCTTCGGACTCAGAGTTCTCCTTTAACTGCAGGC | + |
Preference number: 6 (lower is better) Translates to: RDRQTGTSSGRR*LRTQSSPLTAG Trigger: GCCTGCAGTTAAAGGAGAACTCTGAGTCCGAAGGCATCTCCTGCCACTACTGGTCCCTGTTTGACGGTCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CAA 90 bp | ATGCCTTCGGACTCAGAGTTCTCCTTTAACTGCAGGCCTTCCCCGTaGGGAAGTGATGACCTTCTCTTGGAGTTTCTGTTCGGGGTGGAA | + |
Preference number: 6 (lower is better) Translates to: MPSDSEFSFNCRPSP*GSDDLLLEFLFGVE Trigger: TTCCACCCCGAACAGAAACTCCAAGAGAAGGTCATCACTTCCCAACGGGGAAGGCCTGCAGTTAAAGGAGAACTCTGAGTCCGAAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CAA 90 bp | TCCTTTAACTGCAGGCCTTCCCCGTTGGGAAGTGATGACCTTCTCTaGGAGTTTCTGTTCGGGGTGGAAGTAATGGTTCCGGCTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: SFNCRPSPLGSDDLL*EFLFGVEVMVPAFF Trigger: GAAGAAAGCCGGAACCATTACTTCCACCCCGAACAGAAACTCCAAGAGAAGGTCATCACTTCCCAACGGGGAAGGCCTGCAGTTAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS GCA 72 bp | GTCATGGTCCCCAAGTCCCCTCGTCACTCCAATAGTTaGCATTACTCGGGCCTTCTTGCCTTCTCCATATAT | + |
Preference number: 6 (lower is better) Translates to: VMVPKSPRHSNS*HYSGLLAFSIY Trigger: ATATATGGAGAAGGCAAGAAGGCCCGAGTAATGGCAACTATTGGAGTGACGAGGGGACTTGGGGACCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CCA 72 bp | GTCCTGAGCCGCCAGTGTGTATCTGTGAGGGTCGTCTaGATCACAGTTAGGAAGAAACTGAGTGATTGCTTC | + |
Preference number: 6 (lower is better) Translates to: VLSRQCVSVRVV*ITVRKKLSDCF Trigger: GAAGCAATCACTCAGTTTCTTCCTAACTGTGATCCAGACGACCCTCACAGATACACACTGGCGGCTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000162969.2 |
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CDS TCA 72 bp | CCAGATATATTATACGCACTCCTCTCGCGTTCGATTTaGAGGTCCATTTCCTTGAAAGCGCTCTCCAGGGCC | + |
Preference number: 6 (lower is better) Translates to: PDILYALLSRSI*RSISLKALSRA Trigger: GGCCCTGGAGAGCGCTTTCAAGGAAATGGACCTTCAAATCGAACGCGAGAGGAGTGCGTATAATATATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CCA 72 bp | ACTCAGAGTTCTCCTTTAACTGCAGGCCTTCCCCGTTaGGAAGTGATGACCTTCTCTTGGAGTTTCTGTTCG | + |
Preference number: 6 (lower is better) Translates to: TQSSPLTAGLPR*EVMTFSWSFCS Trigger: CGAACAGAAACTCCAAGAGAAGGTCATCACTTCCCAACGGGGAAGGCCTGCAGTTAAAGGAGAACTCTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS CAA 72 bp | GCCAGATATATTATACGCACTCCTCTCGCGTTCGATTaGAAGGTCCATTTCCTTGAAAGCGCTCTCCAGGGC | + |
Preference number: 6 (lower is better) Translates to: ARYIIRTPLAFD*KVHFLESALQG Trigger: GCCCTGGAGAGCGCTTTCAAGGAAATGGACCTTCAAATCGAACGCGAGAGGAGTGCGTATAATATATCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 |
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CDS TCA 72 bp | ATATCTGGAGAGATCGTAGACTCTGACCTCTGGAGCTaGAGACAGGAATGGTTTTATGTAGATGTTGGAGTC | + |
Preference number: 6 (lower is better) Translates to: ISGEIVDSDLWS*RQEWFYVDVGV Trigger: GACTCCAACATCTACATAAAACCATTCCTGTCTTCAGCTCCAGAGGTCAGAGTCTACGATCTCTCCAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067918.12 ENSMUST00000161487.8 ENSMUST00000162969.2 |