Pregenerated sensors for PPM1G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029147Ensembl transcript IDs: ENSMUST00000031032.11, ENSMUST00000200778.5, ENSMUST00000201407.2, ENSMUST00000202294.4
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCCCTCCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGCTCTTTGTAATGGGCTaGGGAAAGCCACCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: FPPTQQSTGTEPIVDEPKLFVMG*GKPPSP Trigger: GGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAG...CTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGGAGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| 3UTR-3UTR GCA 90 bp | ACGATTAGCTTTTGTTTGGCCTTTAGTCTGAAAAAGTGTTGCTTGAAAGTGTACAGCCACCCAGCCCCCTaGACACCTCATACCCACTGC | + |
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Preference number: 2 (lower is better) Translates to: TISFCLAFSLKKCCLKVYSHPAP*TPHTHC Trigger: GCAGTGGGTATGAGGTGTGCAGGGGGCTGGGTGGCT...GTACACTTTCAAGCAACACTTTTTCAGACTAAAGGCCAAACAAAAGCTAATCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| 3UTR-3UTR TCA 90 bp | ACGATTAGCTTTTGTTTGGCCTTTAGTCTGAAAAAGTGTTGCTTGAAAGTGTACCTCTTTGTAATGGGCTaGGGAAAGCCACCCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TISFCLAFSLKKCCLKVYLFVMG*GKPPSP Trigger: GGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAG...GTACACTTTCAAGCAACACTTTTTCAGACTAAAGGCCAAACAAAAGCTAATCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| 3UTR GCA 72 bp | ATTAGCTTTTGTTTGGCCTTTAGTCTGAAAAAGTGTTaGTTGAAAGTGTACAACAGAGAGCGGGTGCAAGCG | + |
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Preference number: 3 (lower is better) Translates to: ISFCLAFSLKKC*LKVYNRERVQA Trigger: CGCTTGCACCCGCTCTCTGTTGTACACTTTCAAGCAACACTTTTTCAGACTAAAGGCCAAACAAAAGCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | GTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGGTCCGGTTGACCCTTCAGCCCCCTCCGTaGACAGTGCCTCCTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VSGPRAQKTVHMGRVRLTLQPPP*TVPPPV Trigger: AACTGGAGGAGGCACTGTCCACGGAGGGGGCTGAAG...GGTCAACCGGACCCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | GGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGCGCGCCAGCCTTGCATaGCGGAGAAGCCGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GQNSVSGPRAQKTVHMGRRASLA*RRSRRA Trigger: TGCCCTACGGCTTCTCCGCCATGCAAGGCTGGCGCG...CCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | GTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGGTCCGGTTGACCATCCCCAGAAGTGTCTaGCGCCAGGCACTGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSGPRAQKTVHMGRVRLTIPRSV*RQALIQ Trigger: CTGGATCAGTGCCTGGCGCCAGACACTTCTGGGGAT...GGTCAACCGGACCCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | GTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGGTCCGGTTGACCCTCGTCCATCCATGGTaGCCTTGCCACCAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGPRAQKTVHMGRVRLTLVHPW*PCHQHS Trigger: AGAATGCTGGTGGCAAGGTCACCATGGATGGACGAG...GGTCAACCGGACCCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | CACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAGCCTCCCCATTaGGGCCCTGGGGCCCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: HTSYPLLRLKDKDKTQSRVQPPH*GPGALV Trigger: AACCAGGGCCCCAGGGCCTCAATGGGGAGGCTGGAC...CCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CCA 90 bp | GTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGGTCCGGTTGACCCATCCTCATCTTCAGTaGGTCTCCCTGCAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGPRAQKTVHMGRVRLTHPHLQ*VSLQSG Trigger: CCCAGATTGCAGGGAGACCCACTGAAGATGAGGATG...GGTCAACCGGACCCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | AAGTGTTGCTTGAAAGTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACTCTGGCGCCAGGCACTaGTCCAGCAGCTCTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: KCCLKVYNRERVQAARGHSGARH*SSSSST Trigger: TGTGGAAGAGCTGCTGGATCAGTGCCTGGCGCCAGA...GTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACACTTTCAAGCAACACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | CCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGGAGAGTTCTGGCGCCAGGCACTaGTCCAGCAGCTCTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: PTQQSTGTEPIVDEPKESSGARH*SSSSST Trigger: TGTGGAAGAGCTGCTGGATCAGTGCCTGGCGCCAGA...ACTCTCCTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | AGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATCGCGCCAGCCTTGCATaGCGGAGAAGCCGTAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RTRTKLSLGSKGSENSPHRASLA*RRSRRA Trigger: TGCCCTACGGCTTCTCCGCCATGCAAGGCTGGCGCG...ATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CCTCTTTGTAATGGGCTGAGGAAAGCCACCCAGCCCCCTGCACACCTCATACCCCATCCTCATCTTCAGTaGGTCTCCCTGCAATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCNGLRKATQPPAHLIPHPHLQ*VSLQSG Trigger: CCCAGATTGCAGGGAGACCCACTGAAGATGAGGATG...GGGTATGAGGTGTGCAGGGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | GGCCCTCTTTGTAATGGGCTGAGGAAAGCCACCCAGCCCCCTGCACACCTCATATCCCATGTTCCGAGTTaGAGGAAAAGCCTGTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GPLCNGLRKATQPPAHLISHVPS*RKSLCG Trigger: GCCACACAGGCTTTTCCTCCAACTCGGAACATGGGA...TATGAGGTGTGCAGGGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR TCA 90 bp | CCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGGAGAGTTGGGGAGGGACCTTCTaGCAGTTCTGCCCATATCGC | + |
|
Preference number: 4 (lower is better) Translates to: PTQQSTGTEPIVDEPKESWGGTF*QFCPYR Trigger: GCGATATGGGCAGAACTGTCAGAAGGTCCCTCCCCA...ACTCTCCTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR GCA 90 bp | GGCCCTCTTTGTAATGGGCTGAGGAAAGCCACCCAGCCCCCTGCACACCTCATACTACAACCTCCTGGCTaGTCATCACATTCCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: GPLCNGLRKATQPPAHLILQPPG*SSHSRC Trigger: GCATCTGGAATGTGATGAGCAGCCAGGAGGTTGTAG...TATGAGGTGTGCAGGGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCGAGGCCCTGGGGCCCTaGTTCATCGCCTGTCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: PAHLIPTAKAKGQGQNSVEALGP*FIACPN Trigger: ATTGGGACAGGCGATGAACCAGGGCCCCAGGGCCTC...GACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CCA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCATCCCCATTGAGGCCCTaGGGCCCTGGTTCATCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPSPLRP*GPGSSP Trigger: AGGCGATGAACCAGGGCCCCAGGGCCTCAATGGGGA...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CCA 90 bp | CCTCTTTGTAATGGGCTGAGGAAAGCCACCCAGCCCCCTGCACACCTCATACCCGAGAGTCTCCTGCATTaGCCACAATCAACTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PLCNGLRKATQPPAHLIPESLLH*PQSTAS Trigger: GGAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTC...GGGTATGAGGTGTGCAGGGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | TTCCCTCCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGTGCCACCAGCATTCTTaGTGCGTGCCAGCTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: FPPTQQSTGTEPIVDEPKCHQHS*CVPAPL Trigger: AAGTGGAGCTGGCACGCATCAAGAATGCTGGTGGCA...CTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGGAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | GGCCCTCTTTGTAATGGGCTGAGGAAAGCCACCCAGCCCCCTGCACACCTCATAAAGCCTTCTGAAGCTTaGCTTCCTTGTAGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GPLCNGLRKATQPPAHLIKPSEA*LPCRPS Trigger: AGAAGGCCTACAAGGAAGGCAAGCTTCAGAAGGCTT...TATGAGGTGTGCAGGGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | AAGTGTTGCTTGAAAGTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACGTCTTCCTCGTTCTCTaGCTCCTCACTGCTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: KCCLKVYNRERVQAARGHVFLVL*LLTAVA Trigger: GGCTACAGCAGTGAGGAGGCAGAGAACGAGGAAGAC...GTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACACTTTCAAGCAACACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | GTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACAGAGCCGCCAATAAAAGCATTCTTGATGCGTaGCAGCTCCACTTCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: VYNRERVQAARGHRAANKSILDA*QLHFIL Trigger: GAGGATGAAGTGGAGCTGGCACGCATCAAGAATGCT...TTTATTGGCGGCTCTGTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | AGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATCTTCAGCCCCCTCCGTaGACAGTGCCTCCTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: RTRTKLSLGSKGSENSPHLQPPP*TVPPPV Trigger: AACTGGAGGAGGCACTGTCCACGGAGGGGGCTGAAG...ATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | GCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGTCAACTGCTTCCCTCTaGTCAGAGCCACCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: AHLIPTAKAKGQGQNSVSSTASL*SEPPPL Trigger: CAGCGGTGGTGGCTCTGATCAGAGGGAAGCAGTTGA...CGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | CCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGCTCGTCCATCCATGGTaGCCTTGCCACCAGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: PLHTSYPLLRLKDKDKTQLVHPW*PCHQHS Trigger: AGAATGCTGGTGGCAAGGTCACCATGGATGGACGAG...CTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | AGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATCCACCACCGCTGTTGTaGCACTGTCAGAACCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RTRTKLSLGSKGSENSPHPPPLL*HCQNQA Trigger: AGCCTGGTTCTGACAGTGGCACAACAGCGGTGGTGG...ATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | AAGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACACCACCACCGCTGTTGTaGCACTGTCAGAACCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KDKDKTQSRVQGLRKQSTPPPLL*HCQNQA Trigger: AGCCTGGTTCTGACAGTGGCACAACAGCGGTGGTGG...TGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | GTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGGTCCGGTTGACCCATCTGTTCCTGGGGTaGCAAGTTTTTGTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VSGPRAQKTVHMGRVRLTHLFLG*QVFVSL Trigger: AAGAGAAACAAAAACTTGCCACCCCAGGAACAGATG...GGTCAACCGGACCCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAATCCCCAGAAGTGTCTaGCGCCAGGCACTGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPIPRSV*RQALIQ Trigger: CTGGATCAGTGCCTGGCGCCAGACACTTCTGGGGAT...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | CCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGGAGAGTTCAGGAATACAGTTGTaGGCATCCTCCATGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: PTQQSTGTEPIVDEPKESSGIQL*ASSMET Trigger: CGTCTCCATGGAGGATGCTCACAACTGTATTCCTGA...ACTCTCCTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | CAGCCCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGGAATACAGTTGTaGGCATCCTCCATGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: QPPAHLIPTAKAKGQGQNSGIQL*ASSMET Trigger: CGTCTCCATGGAGGATGCTCACAACTGTATTCCTGA...GTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR TCA 90 bp | ACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGTTGCCACTCTCTGCCTaGAGCTCTACTGTGTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: TAKAKGQGQNSVSGPRAQLPLSA*SSTVFR Trigger: CCGAAACACAGTAGAGCTTCAGGCAGAGAGTGGCAA...CTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | CCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCGTCTTCCTCGTTCTCTaGCTCCTCACTGCTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: PAHLIPTAKAKGQGQNSVVFLVL*LLTAVA Trigger: GGCTACAGCAGTGAGGAGGCAGAGAACGAGGAAGAC...GACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | AAGTGTTGCTTGAAAGTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACGGTCTCCCTGCAATCTaGGCCAGTTCCTTAATGACT | + |
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Preference number: 4 (lower is better) Translates to: KCCLKVYNRERVQAARGHGLPAI*ASSLMT Trigger: AGTCATTAAGGAACTGGCCCAGATTGCAGGGAGACC...GTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACACTTTCAAGCAACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CAGCCCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCCCAATTCCAGATTTaGTGTGGGGAGGGACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QPPAHLIPTAKAKGQGQNSQFQI*CGEGPS Trigger: AGAAGGTCCCTCCCCACACCAAATCTGGAATTGGGA...GTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CCA 90 bp | CCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCAGGAGTTTCCCTAGATaGGTCCTCAGGTCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PAHLIPTAKAKGQGQNSVRSFPR*VLRSSL Trigger: GAGGCTGGACCTGAGGACCCATCTAGGGAAACTCCT...GACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGGTGGGGCCATTTTCCTaGGAAGGAGTTTCCCTAGAT | + |
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Preference number: 4 (lower is better) Translates to: FPPTQQSTGTEPIVDEPKVGPFS*EGVSLD Trigger: ATCTAGGGAAACTCCTTCCCAGGAAAATGGCCCCAC...CTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGGAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CCA 90 bp | GCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGCCGGGCTCACTAATTTaGCCTGCCTCAGTCCCATGT | + |
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Preference number: 4 (lower is better) Translates to: AHLIPTAKAKGQGQNSVSPGSLI*PASVPC Trigger: ACATGGGACTGAGGCAGGCCAAATTAGTGAGCCCGG...CGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR TCA 90 bp | AGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATTTGCCACTCTCTGCCTaGAGCTCTACTGTGTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: RTRTKLSLGSKGSENSPHLPLSA*SSTVFR Trigger: CCGAAACACAGTAGAGCTTCAGGCAGAGAGTGGCAA...ATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGAAGCCTTCTGAAGCTTaGCTTCCTTGTAGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FPPTQQSTGTEPIVDEPKKPSEA*LPCRPS Trigger: AGAAGGCCTACAAGGAAGGCAAGCTTCAGAAGGCTT...CTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGGAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | AGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATTTCAGTGGGTCTCCCTaGAATCTGGGCCAGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RTRTKLSLGSKGSENSPHFSGSP*NLGQFL Trigger: AAGGAACTGGCCCAGATTGCAGGGAGACCCACTGAA...ATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR GCA 90 bp | CACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGTTCAGTGGGTCTCCCTaGAATCTGGGCCAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTSYPLLRLKDKDKTQSRFSGSP*NLGQFL Trigger: AAGGAACTGGCCCAGATTGCAGGGAGACCCACTGAA...CCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR GCA 90 bp | CCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGGAGAGTCTCTTCATGCAACAATaGAGCCTCCTCATTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTQQSTGTEPIVDEPKESLFMQQ*SLLIVH Trigger: GTGGACAATGAGGAGGCTGCATTGTTGCATGAAGAG...ACTCTCCTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
||
| CDS-3UTR GCA 90 bp | CCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGCTCACTAATTTGGCCTaGCTCAGTCCCATGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLHTSYPLLRLKDKDKTQLTNLA*LSPMFR Trigger: TCGGAACATGGGACTGAGGCAGGCCAAATTAGTGAG...CTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
||
| CDS-3UTR GCA 90 bp | ACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGACAGCGAGAGTCTCCTaGATTGGCCACAATCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TAKAKGQGQNSVSGPRAQTARVS*IGHNQL Trigger: CAGTTGATTGTGGCCAATGCAGGAGACTCTCGCTGT...CTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CCA 90 bp | CCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGGGTCTCCCTGCAATCTaGGCCAGTTCCTTAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLHTSYPLLRLKDKDKTQGLPAI*ASSLMT Trigger: AGTCATTAAGGAACTGGCCCAGATTGCAGGGAGACC...CTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CCA 90 bp | CCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGGAGAGTCTCCTGCATTaGCCACAATCAACTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLHTSYPLLRLKDKDKTQESLLH*PQSTAS Trigger: GGAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTC...CTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR GCA 90 bp | ACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGATGGTAGCCTCTTCATaGAACAATGCAGCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAKAKGQGQNSVSGPRAQMVASS*NNAASS Trigger: TGAGGAGGCTGCATTGTTGCATGAAGAGGCTACCAT...CTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
||
| CDS-3UTR GCA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAACAGCGAGAGTCTCCTaGATTGGCCACAATCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPTARVS*IGHNQL Trigger: CAGTTGATTGTGGCCAATGCAGGAGACTCTCGCTGT...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR GCA 90 bp | ACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGACATATCTAAAGCTTTaGCAGCCTCGGACACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TAKAKGQGQNSVSGPRAQTYLKL*QPRTPH Trigger: GTGTGGTGTCCGAGGCTGGCAAAGCTTTAGATATGT...CTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR GCA 90 bp | CCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCAGCATTCTTGATGCGTaGCAGCTCCACTTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAHLIPTAKAKGQGQNSVSILDA*QLHFIL Trigger: GAGGATGAAGTGGAGCTGGCACGCATCAAGAATGCT...GACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR GCA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCACTACAACCTCCTGGCTaGTCATCACATTCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPLQPPG*SSHSRC Trigger: GCATCTGGAATGTGATGAGCAGCCAGGAGGTTGTAG...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR GCA 90 bp | CACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGCCTCTTGCCACTCTCTaGCTGAAGCTCTACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTSYPLLRLKDKDKTQSRPLATL*LKLYCV Trigger: AACACAGTAGAGCTTCAGGCAGAGAGTGGCAAGAGG...CCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR GCA 90 bp | CCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCCCTCTTGCCACTCTCTaGCTGAAGCTCTACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PAHLIPTAKAKGQGQNSVPLATL*LKLYCV Trigger: AACACAGTAGAGCTTCAGGCAGAGAGTGGCAAGAGG...GACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CCA 90 bp | GTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACAGAGCCGCCAATAAAGAAATCATCTGTTCCTaGGGTGGCAAGTTTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VYNRERVQAARGHRAANKEIICS*GGKFLF Trigger: AAACAAAAACTTGCCACCCCAGGAACAGATGATTTC...TTTATTGGCGGCTCTGTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACGCAGCTCTTCCACAATaGATGACAATAACCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPPAHLIPTAKAKGQGQNAALPQ*MTITEA Trigger: AGCTTCGGTTATTGTCATCCATTGTGGAAGAGCTGC...GTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR GCA 90 bp | AGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATACATATCTAAAGCTTTaGCAGCCTCGGACACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RTRTKLSLGSKGSENSPHTYLKL*QPRTPH Trigger: GTGTGGTGTCCGAGGCTGGCAAAGCTTTAGATATGT...ATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCCGTAGACAGAAAACATaGCTGTCTCATTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAHLIPTAKAKGQGQNSVRRQKT*LSHCPA Trigger: AGCTGGACAATGAGACAGCCATGTTTTCTGTCTACG...GACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCACGTAGACAGAAAACATaGCTGTCTCATTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPRRQKT*LSHCPA Trigger: AGCTGGACAATGAGACAGCCATGTTTTCTGTCTACG...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCACTCCACTTCATCCTCTaGTTTGTGGTCATAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPLHFIL*FVVIGH Trigger: ATGTCCTATGACCACAAACCAGAGGATGAAGTGGAG...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGGAGAGTGAAATCATCTGTTCCTaGGGTGGCAAGTTTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTQQSTGTEPIVDEPKESEIICS*GGKFLF Trigger: AAACAAAAACTTGCCACCCCAGGAACAGATGATTTC...ACTCTCCTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAGCAGCTCTTCCACAATaGATGACAATAACCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPAALPQ*MTITEA Trigger: AGCTTCGGTTATTGTCATCCATTGTGGAAGAGCTGC...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | AAGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACACATCTGTTCCTGGGGTaGCAAGTTTTTGTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDKDKTQSRVQGLRKQSTHLFLG*QVFVSL Trigger: AAGAGAAACAAAAACTTGCCACCCCAGGAACAGATG...TGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | CACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGTATCAGGAAGATATTTaGCACAGTACAAGGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSYPLLRLKDKDKTQSRYQEDI*HSTRQP Trigger: AGGTTGCCTTGTACTGTGCCAAATATCTTCCTGATA...CCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CCA 90 bp | ACGATTAGCTTTTGTTTGGCCTTTAGTCTGAAAAAGTGTTGCTTGAAAGTGTACCTCCACTTCATCCTCTaGTTTGTGGTCATAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TISFCLAFSLKKCCLKVYLHFIL*FVVIGH Trigger: ATGTCCTATGACCACAAACCAGAGGATGAAGTGGAG...GTACACTTTCAAGCAACACTTTTTCAGACTAAAGGCCAAACAAAAGCTAATCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | GTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACAGAGCCGCCAATAAAGGAGACGCGCCAGCCTaGCATGGCGGAGAAGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: VYNRERVQAARGHRAANKGDAPA*HGGEAV Trigger: TACGGCTTCTCCGCCATGCAAGGCTGGCGCGTCTCC...TTTATTGGCGGCTCTGTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CCA 90 bp | GTTTCCCTAGATGGGTCCTCAGGTCCAGCCTCCCCATTGAGGCCCTaGGGCCCTGGTTCATCGCCTGTCCCAATTCCAGATTTGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSLDGSSGPASPLRP*GPGSSPVPIPDLVW Trigger: CCACACCAAATCTGGAATTGGGACAGGCGATGAACCAGGGCCCCAGGGCCTCAATGGGGAGGCTGGACCTGAGGACCCATCTAGGGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS-3UTR CAA 90 bp | CCTCTTTGTAATGGGCTGAGGAAAGCCACCCAGCCCCCTGCACACCTCATACCCGAGCCACCACCGCTGTaGTGCCACTGTCAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLCNGLRKATQPPAHLIPEPPPL*CHCQNQ Trigger: CTGGTTCTGACAGTGGCACAACAGCGGTGGTGGCTC...GGGTATGAGGTGTGCAGGGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 90 bp | AGGTCCAGCCTCACCGGTAGCAGTACCGGGCTCACTAATTTGGCCTaGCTCAGTCCCATGTTCCGAGTTGGAGGAAAAGCCTGTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSLTGSSTGLTNLA*LSPMFRVGGKACVA Trigger: GGCCACACAGGCTTTTCCTCCAACTCGGAACATGGGACTGAGGCAGGCCAAATTAGTGAGCCCGGTACTGCTACCGGTGAGGCTGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CCA 90 bp | CAGGAAGGTCCAGCCTCACCGGTAGCAGTACCGGGCTCACTAATTTaGCCTGCCTCAGTCCCATGTTCCGAGTTGGAGGAAAAGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QEGPASPVAVPGSLI*PASVPCSELEEKPV Trigger: CACAGGCTTTTCCTCCAACTCGGAACATGGGACTGAGGCAGGCCAAATTAGTGAGCCCGGTACTGCTACCGGTGAGGCTGGACCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS-3UTR CAA 90 bp | GGCCCTCTTTGTAATGGGCTGAGGAAAGCCACCCAGCCCCCTGCACACCTCATAGTCCCAATTCCAGATTaGGTGTGGGGAGGGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPLCNGLRKATQPPAHLIVPIPD*VWGGTF Trigger: GAAGGTCCCTCCCCACACCAAATCTGGAATTGGGAC...TATGAGGTGTGCAGGGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CAA 90 bp | GTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGGTCCGGTTGACCGTGAGAGTCAGCACCTaGATGTCAGGAAGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSGPRAQKTVHMGRVRLTVRVST*MSGRAE Trigger: TTCTGCCCTTCCTGACATCAAGGTGCTGACTCTCAC...GGTCAACCGGACCCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS TCA 90 bp | CACAGCGAGAGTCTCCTGCATTGGCCACAATCAACTGCTTCCCTCTaGTCAGAGCCACCACCGCTGTTGTGCCACTGTCAGAACCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSESLLHWPQSTASL*SEPPPLLCHCQNQA Trigger: AGCCTGGTTCTGACAGTGGCACAACAGCGGTGGTGGCTCTGATCAGAGGGAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTCGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 90 bp | ATCCTCTTCAGCCTCCTCCGTGTCATCCTCGTCTTCCTCGTTCTCTaGCTCCTCACTGCTGTAGCCGTCCTCGTCCTCACTACATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILFSLLRVILVFLVL*LLTAVAVLVLTTFL Trigger: GAGGAATGTAGTGAGGACGAGGACGGCTACAGCAGTGAGGAGGCAGAGAACGAGGAAGACGAGGATGACACGGAGGAGGCTGAAGAGGAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 90 bp | TCGGACACCACACAGCGAGAGTCTCCTGCATTGGCCACAATCAACTaGTTCCCTCTGATCAGAGCCACCACCGCTGTTGTGCCACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDTTQRESPALATIN*FPLIRATTAVVPLS Trigger: TGACAGTGGCACAACAGCGGTGGTGGCTCTGATCAGAGGGAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTCGCTGTGTGGTGTCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | CCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCGGAGACGCGCCAGCCTaGCATGGCGGAGAAGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: PAHLIPTAKAKGQGQNSVGDAPA*HGGEAV Trigger: TACGGCTTCTCCGCCATGCAAGGCTGGCGCGTCTCC...GACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | GTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGGTCCGGTTGACCCTCTTGGCCTTCTTTTaGTCACTGTTGCCGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSGPRAQKTVHMGRVRLTLLAFF*SLLPVS Trigger: AGACACCGGCAACAGTGACAAAAAGAAGGCCAAGAG...GGTCAACCGGACCCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | CAGCCCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACATGGCCCTGGAGAGGTaGAGGCCTCCATTGACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QPPAHLIPTAKAKGQGQNMALER*RPPLTR Trigger: ACGAGTCAATGGAGGCCTCAACCTCTCCAGGGCCAT...GTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | CCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGGCAACTCGAGGCAGCTaGTCAGAGGCTGAAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLHTSYPLLRLKDKDKTQATRGS*SEAEEQ Trigger: CTGCTCTTCAGCCTCTGACAAGCTGCCTCGAGTTGC...CTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
||
| CDS-3UTR CAA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAGAGCCACCACCGCTGTaGTGCCACTGTCAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPEPPPL*CHCQNQ Trigger: CTGGTTCTGACAGTGGCACAACAGCGGTGGTGGCTC...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | AAGTGTTGCTTGAAAGTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACAGGTTGAGGCCTCCATaGACTCGTCCATCCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KCCLKVYNRERVQAARGHRLRPP*TRPSMV Trigger: CACCATGGATGGACGAGTCAATGGAGGCCTCAACCT...GTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACACTTTCAAGCAACACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGAGGTTGAGGCCTCCATaGACTCGTCCATCCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPPTQQSTGTEPIVDEPKRLRPP*TRPSMV Trigger: CACCATGGATGGACGAGTCAATGGAGGCCTCAACCT...CTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGGAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | CCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGATGGCCCTGGAGAGGTaGAGGCCTCCATTGACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PLHTSYPLLRLKDKDKTQMALER*RPPLTR Trigger: ACGAGTCAATGGAGGCCTCAACCTCTCCAGGGCCAT...CTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | CCTCTTTGTAATGGGCTGAGGAAAGCCACCCAGCCCCCTGCACACCTCATACCCACTGTGTTTCGGGGCTaGAAGCAAATGATGATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLCNGLRKATQPPAHLIPTVFRG*KQMMMH Trigger: GTGCATCATCATTTGCTTCAAGCCCCGAAACACAGT...GGGTATGAGGTGTGCAGGGGGCTGGGTGGCTTTCCTCAGCCCATTACAAAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | CTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAACCGGGCTCACTAATTaGGCCTGCCTCAGTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LIPTAKAKGQGQNSVSGPTGLTN*ACLSPM Trigger: CATGGGACTGAGGCAGGCCAAATTAGTGAGCCCGGT...TGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CAA 90 bp | CCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGGAGAGTCGAGAGTCTCCTGCATaGGCCACAATCAACTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTQQSTGTEPIVDEPKESRESPA*ATINCF Trigger: GAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTCG...ACTCTCCTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | CCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTTGCCACCAGCATTCTaGATGCGTGCCAGCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: PLHTSYPLLRLKDKDKTQLPPAF*MRASST Trigger: AGTGGAGCTGGCACGCATCAAGAATGCTGGTGGCAA...CTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | AAGTGTTGCTTGAAAGTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACCCATCCATGGTGACCTaGCCACCAGCATTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KCCLKVYNRERVQAARGHPSMVT*PPAFLM Trigger: CATCAAGAATGCTGGTGGCAAGGTCACCATGGATGG...GTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACACTTTCAAGCAACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | AAGTGTTGCTTGAAAGTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACGTGAGAGTCAGCACCTaGATGTCAGGAAGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KCCLKVYNRERVQAARGHVRVST*MSGRAE Trigger: TTCTGCCCTTCCTGACATCAAGGTGCTGACTCTCAC...GTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACACTTTCAAGCAACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | GGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGGGCAGGATGATGCACGTCATGTaGTCACACCCTGTACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GQNSVSGPRAQKTVHMGRMMHVM*SHPVPS Trigger: GGATGGTACAGGGTGTGACAACATGACGTGCATCAT...CCTGCCCATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | GTGTACAACAGAGAGCGGGTGCAAGCGGCTAGGGGTCACAGAGCCGCCAATAAAACTGTGTTTCGGGGCTaGAAGCAAATGATGATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VYNRERVQAARGHRAANKTVFRG*KQMMMH Trigger: GTGCATCATCATTTGCTTCAAGCCCCGAAACACAGT...TTTATTGGCGGCTCTGTGACCCCTAGCCGCTTGCACCCGCTCTCTGTTGTACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS TCA 90 bp | TCATCGCCTGTCCCAATTCCAGATTTGGTGTGGGGAGGGACCTTCTaGCAGTTCTGCCCATATCGCGTCAGCAGCTCTTCAATAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSPVPIPDLVWGGTF*QFCPYRVSSSSIVM Trigger: CATGACTATTGAAGAGCTGCTGACGCGATATGGGCAGAACTGTCAGAAGGTCCCTCCCCACACCAAATCTGGAATTGGGACAGGCGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS GCA 90 bp | GAGCCACCACCGCTGTTGTGCCACTGTCAGAACCAGGCTCTTCTTTaGCTTCCATTCCAGGGACCATCATCTCTTCATCATCATCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EPPPLLCHCQNQALL*LPFQGPSSLHHHPL Trigger: AAGAGGATGATGATGAAGAGATGATGGTCCCTGGAATGGAAGGCAAAGAAGAGCCTGGTTCTGACAGTGGCACAACAGCGGTGGTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 90 bp | CCACTTCATCCTCTGGTTTGTGGTCATAGGACATATCTAAAGCTTTaGCAGCCTCGGACACCACACAGCGAGAGTCTCCTGCATTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLHPLVCGHRTYLKL*QPRTPHSESLLHWP Trigger: TGGCCAATGCAGGAGACTCTCGCTGTGTGGTGTCCGAGGCTGGCAAAGCTTTAGATATGTCCTATGACCACAAACCAGAGGATGAAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 90 bp | GACTCGTCCATCCATGGTGACCTTGCCACCAGCATTCTTGATGCGTaGCAGCTCCACTTCATCCTCTGGTTTGTGGTCATAGGACATATC | + |
|
Preference number: 5 (lower is better) Translates to: DSSIHGDLATSILDA*QLHFILWFVVIGHI Trigger: GATATGTCCTATGACCACAAACCAGAGGATGAAGTGGAGCTGGCACGCATCAAGAATGCTGGTGGCAAGGTCACCATGGATGGACGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | GCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGTCCCATGTTCCGAGTaGGAGGAAAAGCCTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AHLIPTAKAKGQGQNSVSVPCSE*EEKPVW Trigger: CCACACAGGCTTTTCCTCCAACTCGGAACATGGGAC...CGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
||
| CDS-3UTR CAA 90 bp | CACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGTTGCCACCAGCATTCTaGATGCGTGCCAGCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: HTSYPLLRLKDKDKTQSRLPPAF*MRASST Trigger: AGTGGAGCTGGCACGCATCAAGAATGCTGGTGGCAA...CCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | TTCCCTCCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGATGATGCACGTCATGTaGTCACACCCTGTACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FPPTQQSTGTEPIVDEPKMMHVM*SHPVPS Trigger: GGATGGTACAGGGTGTGACAACATGACGTGCATCAT...CTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGGAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | CAGCCCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACCTCTTGGCCTTCTTTTaGTCACTGTTGCCGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPPAHLIPTAKAKGQGQNLLAFF*SLLPVS Trigger: AGACACCGGCAACAGTGACAAAAAGAAGGCCAAGAG...GTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | AGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGCAACTCGAGGCAGCTaGTCAGAGGCATCATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTRTKLSLGSKGSENSPHATRGS*SEASSS Trigger: TGAGGATGATGCCTCTGACAAGCTGCCTCGAGTTGC...ATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | TTCCCTCCAACACAACAGAGCACAGGCACAGAACCGATAGTCGATGAGCCCAAGAACATGGCTGTCTCATaGTCCAGCTCAGGAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: FPPTQQSTGTEPIVDEPKNMAVS*SSSGIQ Trigger: CTGTATTCCTGAGCTGGACAATGAGACAGCCATGTT...CTTGGGCTCATCGACTATCGGTTCTGTGCCTGTGCTCTGTTGTGTTGGAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | GCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGCGAGAGTCTCCTGCATaGGCCACAATCAACTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AHLIPTAKAKGQGQNSVSRESPA*ATINCF Trigger: GAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTCG...CGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS-3UTR CAA 90 bp | ACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGGACATATCTAAAGCTTaGCCAGCCTCGGACACCACA | + |
|
Preference number: 5 (lower is better) Translates to: TAKAKGQGQNSVSGPRAQDISKA*PASDTT Trigger: TGTGGTGTCCGAGGCTGGCAAAGCTTTAGATATGTC...CTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | CCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCCCATCCATGGTGACCTaGCCACCAGCATTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PAHLIPTAKAKGQGQNSVPSMVT*PPAFLM Trigger: CATCAAGAATGCTGGTGGCAAGGTCACCATGGATGG...GACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 90 bp | GGACTTAGCAACTCGAGGCAGCTTGTCAGAGGCATCATCCTCATCTaGTACTTTGTCTTTATCATCCTCATCTTCAGTGGGTCTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLSNSRQLVRGIILI*YFVFIILIFSGSPC Trigger: GCAGGGAGACCCACTGAAGATGAGGATGATAAAGACAAAGTAGCAGATGAGGATGATGCCTCTGACAAGCTGCCTCGAGTTGCTAAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | CCCCTGCACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGAATGCAGCCTCCTCATaGTCCACATCATCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PLHTSYPLLRLKDKDKTQNAASS*STSSSS Trigger: AGATGAGGATGATGTGGACAATGAGGAGGCTGCATT...CTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTGCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031032.11 |
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| CDS-3UTR CAA 90 bp | AGGACAAGGACAAAACTCAGTCTCGGGTCCAAGGGCTCAGAAAACAGTCCACATGACATATCTAAAGCTTaGCCAGCCTCGGACACCACA | + |
|
Preference number: 5 (lower is better) Translates to: RTRTKLSLGSKGSENSPHDISKA*PASDTT Trigger: TGTGGTGTCCGAGGCTGGCAAAGCTTTAGATATGTC...ATGTGGACTGTTTTCTGAGCCCTTGGACCCGAGACTGAGTTTTGTCCTTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CCA 90 bp | CAGCACCTTGATGTCAGGAAGGGCAGAAATCATCTGTTCCTGGGGTaGCAAGTTTTTGTTTCTCTTGTAGAAGTGGTCTCCAATGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QHLDVRKGRNHLFLG*QVFVSLVEVVSNGP Trigger: AGGGCCATTGGAGACCACTTCTACAAGAGAAACAAAAACTTGCCACCCCAGGAACAGATGATTTCTGCCCTTCCTGACATCAAGGTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS-3UTR CAA 90 bp | CACACCTCATACCCACTGCTAAGGCTAAAGGACAAGGACAAAACTCAGTCTCGGAACATGGCTGTCTCATaGTCCAGCTCAGGAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: HTSYPLLRLKDKDKTQSRNMAVS*SSSGIQ Trigger: CTGTATTCCTGAGCTGGACAATGAGACAGCCATGTT...CCGAGACTGAGTTTTGTCCTTGTCCTTTAGCCTTAGCAGTGGGTATGAGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CCA 90 bp | ACTTTGTCTTTATCATCCTCATCTTCAGTGGGTCTCCCTGCAATCTaGGCCAGTTCCTTAATGACTTCCTCTGTGGTCAGCTTGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TLSLSSSSSVGLPAI*ASSLMTSSVVSLAS Trigger: TGATGCCAAGCTGACCACAGAGGAAGTCATTAAGGAACTGGCCCAGATTGCAGGGAGACCCACTGAAGATGAGGATGATAAAGACAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 90 bp | ATCTGCTACTTTGTCTTTATCATCCTCATCTTCAGTGGGTCTCCCTaGAATCTTCTGAAGCTTGCCTTCCTTGTAGGCCTTCTGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ICYFVFIILIFSGSP*NLLKLAFLVGLLIF Trigger: AAAGATCAGAAGGCCTACAAGGAAGGCAAGCTTCAGAAGATTGCAGGGAGACCCACTGAAGATGAGGATGATAAAGACAAAGTAGCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200778.5 |
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| CDS CCA 72 bp | GATGGGTCCTCAGGTCCAGCCTCCCCATTGAGGCCCTaGGGCCCTGGTTCATCGCCTGTCCCAATTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: DGSSGPASPLRP*GPGSSPVPIPD Trigger: ATCTGGAATTGGGACAGGCGATGAACCAGGGCCCCAGGGCCTCAATGGGGAGGCTGGACCTGAGGACCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CAA 90 bp | GCAGGAAGGTCCAGCCTCACCGGTAGCAGTACCGGGCTCACTAATTaGGCCTGCCTCAGTCCCATGTTCCGAGTTGGAGGAAAAGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGRSSLTGSSTGLTN*ACLSPMFRVGGKAC Trigger: ACAGGCTTTTCCTCCAACTCGGAACATGGGACTGAGGCAGGCCAAATTAGTGAGCCCGGTACTGCTACCGGTGAGGCTGGACCTTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CCA 72 bp | GGGGCCCTGGTTCATCGCCTGTCCCAATTCCAGATTTaGTGTGGGGAGGGACCTTCTGACAGTTCTGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GALVHRLSQFQI*CGEGPSDSSAH Trigger: ATGGGCAGAACTGTCAGAAGGTCCCTCCCCACACCAAATCTGGAATTGGGACAGGCGATGAACCAGGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CCA 72 bp | CCAGCCTCACCGGTAGCAGTACCGGGCTCACTAATTTaGCCTGCCTCAGTCCCATGTTCCGAGTTGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PASPVAVPGSLI*PASVPCSELEE Trigger: TTCCTCCAACTCGGAACATGGGACTGAGGCAGGCCAAATTAGTGAGCCCGGTACTGCTACCGGTGAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CAA 72 bp | TCCAGCCTCACCGGTAGCAGTACCGGGCTCACTAATTaGGCCTGCCTCAGTCCCATGTTCCGAGTTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSLTGSSTGLTN*ACLSPMFRVGG Trigger: TCCTCCAACTCGGAACATGGGACTGAGGCAGGCCAAATTAGTGAGCCCGGTACTGCTACCGGTGAGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CAA 72 bp | CCAGCCTCGGACACCACACAGCGAGAGTCTCCTGCATaGGCCACAATCAACTGCTTCCCTCTGATCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PASDTTQRESPA*ATINCFPLIRA Trigger: GGCTCTGATCAGAGGGAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTCGCTGTGTGGTGTCCGAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CAA 90 bp | AAAGCTTTGCCAGCCTCGGACACCACACAGCGAGAGTCTCCTGCATaGGCCACAATCAACTGCTTCCCTCTGATCAGAGCCACCACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: KALPASDTTQRESPA*ATINCFPLIRATTA Trigger: AGCGGTGGTGGCTCTGATCAGAGGGAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTCGCTGTGTGGTGTCCGAGGCTGGCAAAGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CAA 90 bp | CTGGAGAGGTTGAGGCCTCCATTGACTCGTCCATCCATGGTGACCTaGCCACCAGCATTCTTGATGCGTGCCAGCTCCACTTCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LERLRPPLTRPSMVT*PPAFLMRASSTSSS Trigger: AGAGGATGAAGTGGAGCTGGCACGCATCAAGAATGCTGGTGGCAAGGTCACCATGGATGGACGAGTCAATGGAGGCCTCAACCTCTCCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS TCA 72 bp | AGTCTCCTGCATTGGCCACAATCAACTGCTTCCCTCTaGTCAGAGCCACCACCGCTGTTGTGCCACTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLLHWPQSTASL*SEPPPLLCHCQ Trigger: CTGACAGTGGCACAACAGCGGTGGTGGCTCTGATCAGAGGGAAGCAGTTGATTGTGGCCAATGCAGGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 72 bp | TGTCATCCTCGTCTTCCTCGTTCTCTGCCTCCTCACTaGTGTAGCCGTCCTCGTCCTCACTACATTCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CHPRLPRSLPPH*CSRPRPHYIPH Trigger: GTGAGGAATGTAGTGAGGACGAGGACGGCTACAGCAGTGAGGAGGCAGAGAACGAGGAAGACGAGGATGACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 72 bp | ACACAGCGAGAGTCTCCTGCATTGGCCACAATCAACTaGTTCCCTCTGATCAGAGCCACCACCGCTGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TQRESPALATIN*FPLIRATTAVV Trigger: CACAACAGCGGTGGTGGCTCTGATCAGAGGGAAGCAGTTGATTGTGGCCAATGCAGGAGACTCTCGCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CCA 72 bp | CATGTTGTCACACCCTGTACCATCCCCAGAAGTGTCTaGCGCCAGGCACTGATCCAGCAGCTCTTCCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: HVVTPCTIPRSV*RQALIQQLFHN Trigger: ATTGTGGAAGAGCTGCTGGATCAGTGCCTGGCGCCAGACACTTCTGGGGATGGTACAGGGTGTGACAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CAA 72 bp | TCACTAATTTGGCCTGCCTCAGTCCCATGTTCCGAGTaGGAGGAAAAGCCTGTGTGGCCTTTGGCTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLIWPASVPCSE*EEKPVWPLAVG Trigger: CCCCACAGCCAAAGGCCACACAGGCTTTTCCTCCAACTCGGAACATGGGACTGAGGCAGGCCAAATTAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CAA 72 bp | TTGAGGCCTCCATTGACTCGTCCATCCATGGTGACCTaGCCACCAGCATTCTTGATGCGTGCCAGCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LRPPLTRPSMVT*PPAFLMRASST Trigger: AGTGGAGCTGGCACGCATCAAGAATGCTGGTGGCAAGGTCACCATGGATGGACGAGTCAATGGAGGCCTCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS TCA 72 bp | GTCCCAATTCCAGATTTGGTGTGGGGAGGGACCTTCTaGCAGTTCTGCCCATATCGCGTCAGCAGCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VPIPDLVWGGTF*QFCPYRVSSSS Trigger: TGAAGAGCTGCTGACGCGATATGGGCAGAACTGTCAGAAGGTCCCTCCCCACACCAAATCTGGAATTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
||
| CDS CAA 72 bp | ACTCGTCCATCCATGGTGACCTTGCCACCAGCATTCTaGATGCGTGCCAGCTCCACTTCATCCTCTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRPSMVTLPPAF*MRASSTSSSGL Trigger: CAAACCAGAGGATGAAGTGGAGCTGGCACGCATCAAGAATGCTGGTGGCAAGGTCACCATGGATGGACGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
||
| CDS CAA 90 bp | TCTTCACTGTCCTCAAAGAACTTGGACTTAGCAACTCGAGGCAGCTaGTCAGAGGCTGAAGAGCAGGAAGGTCCAGCCTCACCGGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLSSKNLDLATRGS*SEAEEQEGPASPVA Trigger: TGCTACCGGTGAGGCTGGACCTTCCTGCTCTTCAGCCTCTGACAAGCTGCCTCGAGTTGCTAAGTCCAAGTTCTTTGAGGACAGTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CAA 90 bp | TCTACTGTGTTTCGGGGCTTGAAGCAAATGATGATGCACGTCATGTaGTCACACCCTGTACCATCCCCAGAAGTGTCTGGCGCCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: STVFRGLKQMMMHVM*SHPVPSPEVSGARH Trigger: GTGCCTGGCGCCAGACACTTCTGGGGATGGTACAGGGTGTGACAACATGACGTGCATCATCATTTGCTTCAAGCCCCGAAACACAGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 72 bp | CCTCTGGTTTGTGGTCATAGGACATATCTAAAGCTTTaGCAGCCTCGGACACCACACAGCGAGAGTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLVCGHRTYLKL*QPRTPHSESLL Trigger: CAGGAGACTCTCGCTGTGTGGTGTCCGAGGCTGGCAAAGCTTTAGATATGTCCTATGACCACAAACCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CAA 72 bp | TCCTCAAAGAACTTGGACTTAGCAACTCGAGGCAGCTaGTCAGAGGCTGAAGAGCAGGAAGGTCCAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSKNLDLATRGS*SEAEEQEGPAS Trigger: TGAGGCTGGACCTTCCTGCTCTTCAGCCTCTGACAAGCTGCCTCGAGTTGCTAAGTCCAAGTTCTTTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CAA 90 bp | AGAGCCACCACCGCTGTTGTGCCACTGTCAGAACCAGGCTCTTCTTaGCCTTCCATTCCAGGGACCATCATCTCTTCATCATCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RATTAVVPLSEPGSS*PSIPGTIISSSSSS Trigger: AGAGGATGATGATGAAGAGATGATGGTCCCTGGAATGGAAGGCAAAGAAGAGCCTGGTTCTGACAGTGGCACAACAGCGGTGGTGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 72 bp | ATCCATGGTGACCTTGCCACCAGCATTCTTGATGCGTaGCAGCTCCACTTCATCCTCTGGTTTGTGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: IHGDLATSILDA*QLHFILWFVVI Trigger: TATGACCACAAACCAGAGGATGAAGTGGAGCTGGCACGCATCAAGAATGCTGGTGGCAAGGTCACCATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CAA 72 bp | ACCGCTGTTGTGCCACTGTCAGAACCAGGCTCTTCTTaGCCTTCCATTCCAGGGACCATCATCTCTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: TAVVPLSEPGSS*PSIPGTIISSS Trigger: TGATGAAGAGATGATGGTCCCTGGAATGGAAGGCAAAGAAGAGCCTGGTTCTGACAGTGGCACAACAGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CAA 72 bp | TTTCGGGGCTTGAAGCAAATGATGATGCACGTCATGTaGTCACACCCTGTACCATCCCCAGAAGTGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: FRGLKQMMMHVM*SHPVPSPEVSG Trigger: GCCAGACACTTCTGGGGATGGTACAGGGTGTGACAACATGACGTGCATCATCATTTGCTTCAAGCCCCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CCA 72 bp | TTATCATCCTCATCTTCAGTGGGTCTCCCTGCAATCTaGGCCAGTTCCTTAATGACTTCCTCTGTGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSSSSSVGLPAI*ASSLMTSSVVS Trigger: GCTGACCACAGAGGAAGTCATTAAGGAACTGGCCCAGATTGCAGGGAGACCCACTGAAGATGAGGATGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000201407.2 ENSMUST00000202294.4 |
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| CDS CCA 72 bp | CCTCTTCCCCTCCATGTCCATCGTAGACAGAAAACATaGCTGTCTCATTGTCCAGCTCAGGAATACAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLPLHVHRRQKT*LSHCPAQEYSC Trigger: ACAACTGTATTCCTGAGCTGGACAATGAGACAGCCATGTTTTCTGTCTACGATGGACATGGAGGGGAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000202294.4 |
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| CDS CAA 72 bp | GGCAGCTTGTCAGAGGCATCATCCTCATCTGCTACTTaGTCTTTATCATCCTCATCTTCAGTGGGTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: GSLSEASSSSAT*SLSSSSSVGLP Trigger: AGGGAGACCCACTGAAGATGAGGATGATAAAGACAAAGTAGCAGATGAGGATGATGCCTCTGACAAGCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| CDS GCA 72 bp | AACTCGAGGCAGCTTGTCAGAGGCATCATCCTCATCTaGTACTTTGTCTTTATCATCCTCATCTTCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: NSRQLVRGIILI*YFVFIILIFSG Trigger: CCCACTGAAGATGAGGATGATAAAGACAAAGTAGCAGATGAGGATGATGCCTCTGACAAGCTGCCTCGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| CDS CAA 72 bp | ACCATGAATTCATGGTCATCAGTGAGAGTCAGCACCTaGATGTCAGGAAGGGCAGAAATCATCTGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TMNSWSSVRVST*MSGRAEIICSW Trigger: CCAGGAACAGATGATTTCTGCCCTTCCTGACATCAAGGTGCTGACTCTCACTGATGACCATGAATTCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS CAA 72 bp | TCCTCAAAGAACTTGGACTTAGCAACTCGAGGCAGCTaGTCAGAGGCATCATCCTCATCTGCTACTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSKNLDLATRGS*SEASSSSATLS Trigger: AGACAAAGTAGCAGATGAGGATGATGCCTCTGACAAGCTGCCTCGAGTTGCTAAGTCCAAGTTCTTTGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| CDS CAA 90 bp | TCTTCACTGTCCTCAAAGAACTTGGACTTAGCAACTCGAGGCAGCTaGTCAGAGGCATCATCCTCATCTGCTACTTTGTCTTTATCATCC | + |
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Preference number: 6 (lower is better) Translates to: SSLSSKNLDLATRGS*SEASSSSATLSLSS Trigger: GGATGATAAAGACAAAGTAGCAGATGAGGATGATGCCTCTGACAAGCTGCCTCGAGTTGCTAAGTCCAAGTTCTTTGAGGACAGTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202294.4 |
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| CDS TCA 72 bp | CCGAAGCTCCCCGTTTTCATCACGTTGACTGATCTTTaGTTGAATAAAGTCTACAACCTCCTGGCTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PKLPVFITLTDL*LNKVYNLLAAH Trigger: ATGAGCAGCCAGGAGGTTGTAGACTTTATTCAATCAAAGATCAGTCAACGTGATGAAAACGGGGAGCTTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031032.11 ENSMUST00000202294.4 |
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| CDS GCA 72 bp | TTTGTCTTTATCATCCTCATCTTCAGTGGGTCTCCCTaGAATCTGGGCCAGTTCCTTAATGACTTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: FVFIILIFSGSP*NLGQFLNDFLC Trigger: ACAGAGGAAGTCATTAAGGAACTGGCCCAGATTGCAGGGAGACCCACTGAAGATGAGGATGATAAAGACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000201407.2 ENSMUST00000202294.4 |
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| CDS GCA 72 bp | CAATGCAGCCTCCTCATTGTCCACATCATCCTCATCTaGTACTTTGTCTTTATCATCCTCATCTTCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QCSLLIVHIILI*YFVFIILIFSG Trigger: CCCACTGAAGATGAGGATGATAAAGACAAAGTAGCAGATGAGGATGATGTGGACAATGAGGAGGCTGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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| CDS CAA 90 bp | TCAATAGTCATGGTAGCCTCTTCATGCAACAATGCAGCCTCCTCATaGTCCACATCATCCTCATCTGCTACTTTGTCTTTATCATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SIVMVASSCNNAASS*STSSSSATLSLSSS Trigger: TGAGGATGATAAAGACAAAGTAGCAGATGAGGATGATGTGGACAATGAGGAGGCTGCATTGTTGCATGAAGAGGCTACCATGACTATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031032.11 ENSMUST00000200778.5 ENSMUST00000201407.2 |
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