Pregenerated sensors for PPM1D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020525Ensembl transcript IDs: ENSMUST00000020835.16, ENSMUST00000127717.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGAAAAACTTCACATATTTTAAGCAAACACTAGAAGAGAATATATaGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: KKNFTYFKQTLEENI*PNATGLGQMVCEAN Trigger: GTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATATATTCTCTTCTAGTGTTTGCTTAAAATATGTGAAGTTTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | CAACTTCGCACCAAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTGCCTCCCGACCGCCGTaGCCGTCGCACACTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QLRTKFKKPSVVGRETPTASRPP*PSHTAK Trigger: CTTTGCAGTGTGCGACGGGCACGGCGGTCGGGAGGC...AGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTTGGTGCGAAGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | TATGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTCCCGGGCAAACTGTaGCGCCTCCCGACCGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: YGLMPLVWDKWCVRQTHFLPGKL*RLPTAV Trigger: CACGGCGGTCGGGAGGCGGCACAGTTTGCCCGGGAG...GAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATTCTTCCTCTGGCCCCTaGGTCTGCGCCTCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHSSSGP*VCASGS Trigger: TGACCCTGAGGCGCAGACTCAGGGGCCAGAGGAAGA...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATGCCCGAAGCATACGCTaGCTCCAGCGGCCAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHARSIR*LQRPSA Trigger: AGCACTTGGCCGCTGGAGGCAGCGTATGCTTCGGGC...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATCAGGTCCACTGTGAGTaGGCCGGGGCCTTTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHQVHCE*AGAFSK Trigger: TTTGGAAAAGGCCCCGGCTCACTCACAGTGGACCTG...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATAGGCGAGGAAACCTTTaGGGATGGCAGCGCACACCT | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHRRGNL*GWQRTP Trigger: AGGTGTGCGCTGCCATCCGCAAAGGTTTCCTCGCCT...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATGGCTCCACCACGATCTaGGTTACGTCCTCCATGTAC | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHGSTTI*VTSSMY Trigger: GTACATGGAGGACGTAACTCAGATCGTGGTGGAGCC...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATATGAAACCCCACAAGTaGTCCCGGGCAAACTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHMKPHK*SRANCA Trigger: GGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCAT...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTGTGCCTGCGCTGGGATaGTGTAGGGAGACTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GLGQMVCEANTLPSVPEIVPALG*CRETGS Trigger: GCTTCCAGTCTCCCTACAGCATCCCAGCGCAGGCAC...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATTCCTTTGGGTCATCCTaGATTCCAAGGACCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHSFGSS*IPRTTP Trigger: TGGGGTGGTCCTTGGAATTCAGGATGACCCAAAGGA...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATGGTGTCTGGTTCAGGTaGCACCACAAACTTACCACT | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHGVWFR*HHKLTT Trigger: AGTGGTAAGTTTGTGGTGTCACCTGAACCAGACACC...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATAAGCCATTTCGTCGGTaGTTCTTCATAAGGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHKPFRR*FFIRGP Trigger: TGGCCCCCTTATGAAGAAGCACCGACGAAATGGCTT...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | TATGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCGGGGGTCAAGAGTGTaGACACTGGTGTCTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: YGLMPLVWDKWCVRQTHFRGSRV*TLVSGS Trigger: TGAACCAGACACCAGTGTCCACACTCTTGACCCCCG...GAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | CAACTTCGCACCAAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTCTTAGAGCTCAGCCTTaGCCATGCATCTTCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: QLRTKFKKPSVVGRETPTLRAQP*PCIFFR Trigger: CCGGAAGAAGATGCATGGCCAAGGCTGAGCTCTAAG...AGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTTGGTGCGAAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATGAGGTGAAGCCTTTCTaGTTCTTGATGAAACCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHEVKPF*FLMKPH Trigger: GTGGGGTTTCATCAAGAAGCAGAAAGGCTTCACCTC...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | TGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTCCTCCAGCGGCCAAGTaGTCGATTCACAAGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: WPNATGLGQMVCEANTLPPPAAK*SIHKHF Trigger: AAAATGCTTGTGAATCGAGCACTTGGCCGCTGGAGG...AGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATAGGATAATATACTTGTaGTTCCGGGGGTCAAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: KFKKPSVVGRETPTSQAHRIIYL*FRGSRV Trigger: CACTCTTGACCCCCGGAAGCACAAGTATATTATCCT...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTCTTGGTCTTGGCACATaGAGATGGCATCTTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLGQMVCEANTLPSVPEILGLGT*RWHLEV Trigger: CACCTCAAGATGCCATCTCCATGTGCCAAGACCAAG...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | TGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTTCTCCTCTTGGTCTTaGCACATGGAGATGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: WPNATGLGQMVCEANTLPFSSWS*HMEMAS Trigger: AGATGCCATCTCCATGTGCCAAGACCAAGAGGAGAA...AGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTACTGTTTTCCGGTGCTaGTGGAGAAGAGGATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GLGQMVCEANTLPSVPEITVFRC*WRRGFP Trigger: GGGAAATCCTCTTCTCCACCAGCACCGGAAAACAGT...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTGTCACCAAGCGCTCTTaGTACAGCCAGAAAAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: GLGQMVCEANTLPSVPEIVTKRS*YSQKRN Trigger: ATTCCTTTTCTGGCTGTAGCAAGAGCGCTTGGTGAC...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | TGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTCTGAGAAGGCATTACTaGGAACAAGGGCAGGTATAT | + |
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Preference number: 4 (lower is better) Translates to: WPNATGLGQMVCEANTLPLRRHY*EQGQVY Trigger: ATATACCTGCCCTTGTTCGCAGTAATGCCTTCTCAG...AGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | TATGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCACACTGTTTTCCGGTaGTGGTGGAGAAGAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: YGLMPLVWDKWCVRQTHFHTVFR*WWRRGF Trigger: AAATCCTCTTCTCCACCAGCACCGGAAAACAGTGTG...GAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | CAACTTCGCACCAAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTGATTCACAAGCATTTTaGCACAGGACTGTCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QLRTKFKKPSVVGRETPTDSQAF*HRTVLA Trigger: AGCAAGGACAGTCCTGTGCCAAAATGCTTGTGAATC...AGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTTGGTGCGAAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | CAACTTCGCACCAAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTAGATGCAGATTACGATaGCACTTGTGTTATCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QLRTKFKKPSVVGRETPTRCRLR*HLCYLP Trigger: GGGCAGATAACACAAGTGCCATCGTAATCTGCATCT...AGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTTGGTGCGAAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | TGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTTGGTGAAGTTCCCTTaGTTGTCTACTTCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: WPNATGLGQMVCEANTLPLVKFP*LSTSGE Trigger: CTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAA...AGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTACAAGGGCAGGTATATaGTCCTTAGAGCTCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GLGQMVCEANTLPSVPEITRAGI*SLELSL Trigger: AAGGCTGAGCTCTAAGGACCATATACCTGCCCTTGT...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTATGGAGATGGCATCTTaGGGTGGAACCATATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GLGQMVCEANTLPSVPEIMEMAS*GGTIFQ Trigger: TTGGAATATGGTTCCACCTCAAGATGCCATCTCCAT...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTGCTCATCTTCATTGGTaGAGTTCCCTTGGTTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: GLGQMVCEANTLPSVPEIAHLHW*SSLGCL Trigger: TAGACAACCAAGGGAACTTCACCAATGAAGATGAGC...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCGGAAACCTTTGCGGATaGCAGCGCACACCTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: DSSDFSSTLALLSQLLCVGNLCG*QRTPWR Trigger: CCGCCAAGGTGTGCGCTGCCATCCGCAAAGGTTTCC...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | TGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTACCTGTCATAGTCTTTaGCCATTCTGCCAGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: WPNATGLGQMVCEANTLPTCHSL*PFCQFL Trigger: AAGAAACTGGCAGAATGGCCAAAGACTATGACAGGT...AGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | CAACTTCGCACCAAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTGGTGGTGTAGAACTTaGAGAAGAAGTCATCACACA | + |
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Preference number: 4 (lower is better) Translates to: QLRTKFKKPSVVGRETPTWWCRT*RRSHHT Trigger: TGTGTGATGACTTCTTCTCCAAGTTCTACACCACCA...AGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTTGGTGCGAAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | TGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTGGAATGAGGCCAACTaGCAGAGTATTATTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: WPNATGLGQMVCEANTLPWNEAN*QSIIQR Trigger: TCTTTGAATAATACTCTGTCAGTTGGCCTCATTCCA...AGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTTTGAATTGGTTGGAATaGGGCCAACTGACAGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: GLGQMVCEANTLPSVPEILNWLE*GQLTEY Trigger: ATACTCTGTCAGTTGGCCTCATTCCAACCAATTCAA...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCTACTTCCTCCCGCCCTaGTCCGAGAAGACGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: DSSDFSSTLALLSQLLCVYFLPP*SEKTLT Trigger: AGTGAGCGTCTTCTCGGACCAGGGCGGGAGGAAGTA...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR TCA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCTTCCACATGGCGAGGTaGCAGGCGAGGAAACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: DSSDFSSTLALLSQLLCVFHMAR*QARKPL Trigger: CAAAGGTTTCCTCGCCTGTCACCTCGCCATGTGGAA...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | TATGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCTTGGTTGTCTACTTCTaGAGAGATGCAGATTACGAT | + |
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Preference number: 4 (lower is better) Translates to: YGLMPLVWDKWCVRQTHFLVVYF*RDADYD Trigger: ATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAA...GAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCGGCACTTGTGTTATCTaGCCGAAGCATACGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: DSSDFSSTLALLSQLLCVGTCVI*PKHTLP Trigger: AGGCAGCGTATGCTTCGGGCAGATAACACAAGTGCC...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCCAAGAGTGTGGACACTaGTGTCTGGTTCAGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: DSSDFSSTLALLSQLLCVQECGH*CLVQVT Trigger: TGTCACCTGAACCAGACACCAGTGTCCACACTCTTG...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCCCAGAGTCACCTACATaGGCTACATACATCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: DSSDFSSTLALLSQLLCVPESPT*ATYIFM Trigger: CATGAAGATGTATGTAGCGCATGTAGGTGACTCTGG...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR GCA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCGCACAGGACTGTCCTTaGTCACCCATCAAGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: DSSDFSSTLALLSQLLCVAQDCP*SPIKYF Trigger: AAAATACTTGATGGGTGAGCAAGGACAGTCCTGTGC...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CCA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCTTCCTTGGGAAGTTCTaGCTTGTGATCTTGTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: DSSDFSSTLALLSQLLCVFLGKF*LVILCH Trigger: GTGACACAAGATCACAAGCCAGAACTTCCCAAGGAA...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS GCA 90 bp | CCGGGCAAACTGTGCCGCCTCCCGACCGCCGTGCCCGTCGCACACTaGAAAGAAGGCCACCGAAGAGCGGCGGCGACAGCAGCGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PGKLCRLPTAVPVAH*KEGHRRAAATAAAS Trigger: GCTGGCCGCTGCTGTCGCCGCCGCTCTTCGGTGGCCTTCTTTGCAGTGTGCGACGGGCACGGCGGTCGGGAGGCGGCACAGTTTGCCCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS TCA 90 bp | GGCGCCGGCTTGTCCTCCGCAGCCGGCTCGGGCTCCACCACGATCTaGGTTACGTCCTCCATGTACTTCCTCCCGCCCTGGTCCGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GAGLSSAAGSGSTTI*VTSSMYFLPPWSEK Trigger: CTTCTCGGACCAGGGCGGGAGGAAGTACATGGAGGACGTAACTCAGATCGTGGTGGAGCCCGAGCCGGCTGCGGAGGACAAGCCGGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS GCA 90 bp | TCGGACGAGGTGAAGCCTTTCTGCTTCTTGATGAAACCCCACAAGTaGTCCCGGGCAAACTGTGCCGCCTCCCGACCGCCGTGCCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SDEVKPFCFLMKPHK*SRANCAASRPPCPS Trigger: CGACGGGCACGGCGGTCGGGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAAGGCTTCACCTCGTCCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 90 bp | CCCCTGAGTCTGCGCCTCAGGGTCAGTTTGACAGAGTGCCTGCGCTaGGATGCTGTAGGGAGACTGGAAGCCTGGGCCCCGCTACTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PLSLRLRVSLTECLR*DAVGRLEAWAPLLR Trigger: TCGAAGTAGCGGGGCCCAGGCTTCCAGTCTCCCTACAGCATCCCAGCGCAGGCACTCTGTCAAACTGACCCTGAGGCGCAGACTCAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 90 bp | TTTCTGCTTCTTGATGAAACCCCACAAGTGCTCCCGGGCAAACTGTaGCGCCTCCCGACCGCCGTGCCCGTCGCACACTGCAAAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLLDETPQVLPGKL*RLPTAVPVAHCKEG Trigger: GCCTTCTTTGCAGTGTGCGACGGGCACGGCGGTCGGGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 90 bp | ATGGCAGCGCACACCTTGGCGGGCTCGGACGAGGTGAAGCCTTTCTaGTTCTTGATGAAACCCCACAAGTGCTCCCGGGCAAACTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MAAHTLAGSDEVKPF*FLMKPHKCSRANCA Trigger: GGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAAGGCTTCACCTCGTCCGAGCCCGCCAAGGTGTGCGCTGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS-3UTR CAA 90 bp | TGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTATGGCAGCGCACACCTaGGCGGGCTCGGACGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPNATGLGQMVCEANTLPMAAHT*AGSDEV Trigger: CACCTCGTCCGAGCCCGCCAAGGTGTGCGCTGCCAT...AGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 90 bp | TTGACAGAGTGCCTGCGCTGGGATGCTGTAGGGAGACTGGAAGCCTaGGCCCCGCTACTTCGACTTAAGCCATTTCGTCGGTGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTECLRWDAVGRLEA*APLLRLKPFRRCFF Trigger: GAAGAAGCACCGACGAAATGGCTTAAGTCGAAGTAGCGGGGCCCAGGCTTCCAGTCTCCCTACAGCATCCCAGCGCAGGCACTCTGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS TCA 90 bp | GTCATAGTCTTTGGCCATTCTGCCAGTTTCTTCCACATGGCGAGGTaGCAGGCGAGGAAACCTTTGCGGATGGCAGCGCACACCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VIVFGHSASFFHMAR*QARKPLRMAAHTLA Trigger: CGCCAAGGTGTGCGCTGCCATCCGCAAAGGTTTCCTCGCCTGTCACCTCGCCATGTGGAAGAAACTGGCAGAATGGCCAAAGACTATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS CCA 90 bp | ACTGTTTTCCGGTGCTGGTGGAGAAGAGGATTTCCCATCTTCCTCTaGCCCCTGAGTCTGCGCCTCAGGGTCAGTTTGACAGAGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVFRCWWRRGFPIFL*PLSLRLRVSLTECL Trigger: CAGGCACTCTGTCAAACTGACCCTGAGGCGCAGACTCAGGGGCCAGAGGAAGATGGGAAATCCTCTTCTCCACCAGCACCGGAAAACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS-3UTR CAA 90 bp | TATGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCAGGCGAGGAAACCTTaGCGGATGGCAGCGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: YGLMPLVWDKWCVRQTHFQARKP*RMAAHT Trigger: GGTGTGCGCTGCCATCCGCAAAGGTTTCCTCGCCTG...GAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTCGCCTCAGGGTCAGTTaGACAGAGTGCCTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLGQMVCEANTLPSVPEIRLRVS*TECLRW Trigger: CCAGCGCAGGCACTCTGTCAAACTGACCCTGAGGCG...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 90 bp | ACTTGTGTTATCTGCCCGAAGCATACGCTGCCTCCAGCGGCCAAGTaGTCGATTCACAAGCATTTTGGCACAGGACTGTCCTTGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TCVICPKHTLPPAAK*SIHKHFGTGLSLLT Trigger: GGTGAGCAAGGACAGTCCTGTGCCAAAATGCTTGTGAATCGAGCACTTGGCCGCTGGAGGCAGCGTATGCTTCGGGCAGATAACACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 90 bp | GTCTACTTCTGGAGAGATGCAGATTACGATGGCACTTGTGTTATCTaGCCGAAGCATACGCTGCCTCCAGCGGCCAAGTGCTCGATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VYFWRDADYDGTCVI*PKHTLPPAAKCSIH Trigger: GTGAATCGAGCACTTGGCCGCTGGAGGCAGCGTATGCTTCGGGCAGATAACACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS TCA 90 bp | AAAGGAATCTGGTCAATGACTGTGCTCCTTCTGACAGGTCCACTGTaGGTGAGCCGGGGCCTTTTCCAAACTACTCGGTTCACTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KGIWSMTVLLLTGPL*VSRGLFQTTRFTPD Trigger: GTCTGGAGTGAACCGAGTAGTTTGGAAAAGGCCCCGGCTCACTCACAGTGGACCTGTCAGAAGGAGCACAGTCATTGACCAGATTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
||
| CDS GCA 90 bp | ATGCAGATTACGATGGCACTTGTGTTATCTGCCCGAAGCATACGCTaGCTCCAGCGGCCAAGTGCTCGATTCACAAGCATTTTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: MQITMALVLSARSIR*LQRPSARFTSILAQ Trigger: CTGTGCCAAAATGCTTGTGAATCGAGCACTTGGCCGCTGGAGGCAGCGTATGCTTCGGGCAGATAACACAAGTGCCATCGTAATCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS TCA 90 bp | GTGCTTCCGGGGGTCAAGAGTGTGGACACTGGTGTCTGGTTCAGGTaGCACCACAAACTTACCACTGAAGAAATCATAGCTCCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLPGVKSVDTGVWFR*HHKLTTEEIIAPQV Trigger: GACTTGTGGAGCTATGATTTCTTCAGTGGTAAGTTTGTGGTGTCACCTGAACCAGACACCAGTGTCCACACTCTTGACCCCCGGAAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS-3UTR CAA 90 bp | CAACTTCGCACCAAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTTTCTCCTCTTGGTCTaGGCACATGGAGATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: QLRTKFKKPSVVGRETPTFLLLV*AHGDGI Trigger: GATGCCATCTCCATGTGCCAAGACCAAGAGGAGAAA...AGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTTGGTGCGAAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS CCA 90 bp | TCACTTCCCAGGATAATATACTTGTGCTTCCGGGGGTCAAGAGTGTaGACACTGGTGTCTGGTTCAGGTGACACCACAAACTTACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPRIIYLCFRGSRV*TLVSGSGDTTNLPL Trigger: CAGTGGTAAGTTTGTGGTGTCACCTGAACCAGACACCAGTGTCCACACTCTTGACCCCCGGAAGCACAAGTATATTATCCTGGGAAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCTTCTGGCTTGTGATCTaGTGTCACCTCCACAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YGLMPLVWDKWCVRQTHFFWLVI*CHLHSS Trigger: AGAGCTGTGGAGGTGACACAAGATCACAAGCCAGAA...GAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | CAACTTCGCACCAAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTCATGGAGATGGCATCTaGAGGTGGAACCATATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLRTKFKKPSVVGRETPTHGDGI*RWNHIP Trigger: TGGAATATGGTTCCACCTCAAGATGCCATCTCCATG...AGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTTGGTGCGAAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTCGATTCACAAGCATTTaGGCACAGGACTGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGQMVCEANTLPSVPEIRFTSI*AQDCPC Trigger: GCAAGGACAGTCCTGTGCCAAAATGCTTGTGAATCG...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATATAAGGGGGCCAGAGTaGGATTCTTCTAATGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KFKKPSVVGRETPTSQAHIRGPE*DSSNVL Trigger: AAGGACATTAGAAGAATCCAACTCTGGCCCCCTTAT...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS TCA 90 bp | TGTGGACACTGGTGTCTGGTTCAGGTGACACCACAAACTTACCACTaGAGAAATCATAGCTCCACAAGTCACCAAGCGCTCTTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: CGHWCLVQVTPQTYH*RNHSSTSHQALLLQ Trigger: CTGTAGCAAGAGCGCTTGGTGACTTGTGGAGCTATGATTTCTTCAGTGGTAAGTTTGTGGTGTCACCTGAACCAGACACCAGTGTCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS GCA 90 bp | GGAACCATATTCCAAAGTCCATCACTTCCCAGGATAATATACTTGTaGTTCCGGGGGTCAAGAGTGTGGACACTGGTGTCTGGTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTIFQSPSLPRIIYL*FRGSRVWTLVSGSG Trigger: ACCTGAACCAGACACCAGTGTCCACACTCTTGACCCCCGGAAGCACAAGTATATTATCCTGGGAAGTGATGGACTTTGGAATATGGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS CCA 90 bp | TGTTCATCACACTGCCGCCAAGTCCTTCGATTCTTTCTCTTTCCTTaGGAAGTTCTGGCTTGTGATCTTGTGTCACCTCCACAGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSSHCRQVLRFFLFP*EVLACDLVSPPQLS Trigger: TGAGAGCTGTGGAGGTGACACAAGATCACAAGCCAGAACTTCCCAAGGAAAGAGAAAGAATCGAAGGACTTGGCGGCAGTGTGATGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS CCA 90 bp | AAAAACTTCTCTGAGAAGGCATTACTGCGAACAAGGGCAGGTATATaGTCCTTAGAGCTCAGCCTTGGCCATGCATCTTCTTCCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KNFSEKALLRTRAGI*SLELSLGHASSSGD Trigger: GTCACCGGAAGAAGATGCATGGCCAAGGCTGAGCTCTAAGGACCATATACCTGCCCTTGTTCGCAGTAATGCCTTCTCAGAGAAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | TATGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCAGATTACGATGGCACTaGTGTTATCTGCCCGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YGLMPLVWDKWCVRQTHFRLRWH*CYLPEA Trigger: TGCTTCGGGCAGATAACACAAGTGCCATCGTAATCT...GAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTGTGAAGTTCCCTTGGTaGTCTACTTCTGGAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLGQMVCEANTLPSVPEIVKFPW*STSGEM Trigger: CATCTCTCCAGAAGTAGACAACCAAGGGAACTTCAC...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | CAACTTCGCACCAAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTATTGGTGAAGTTCCCTaGGTTGTCTACTTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLRTKFKKPSVVGRETPTIGEVP*VVYFWR Trigger: TCTCCAGAAGTAGACAACCAAGGGAACTTCACCAAT...AGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTTGGTGCGAAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | AAGTTTAAAAAGCCCTCAGTCGTAGGTAGGGAGACCCCCACTTCCCAGGCCCATCTTAAAGTCAGGGCTTaGGGGCAATTTTCTTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KFKKPSVVGRETPTSQAHLKVRA*GQFSSS Trigger: ACTTGAAGAAAATTGCCCCAAAGCCCTGACTTTAAG...ATGGGCCTGGGAAGTGGGGGTCTCCCTACCTACGACTGAGGGCTTTTTAAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | GGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTTCTGTGCCAGAGATTGTGTCTCTGAGTCTTTaGAGGTCATCACTACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLGQMVCEANTLPSVPEIVSLSL*RSSLQS Trigger: AGACTGTAGTGATGACCTCAAAAGACTCAGAGACAC...AATCTCTGGCACAGAAGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 90 bp | AAAGAGCTCATCTTCATTGGTGAAGTTCCCTTGGTTGTCTACTTCTaGAGAGATGCAGATTACGATGGCACTTGTGTTATCTGCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KELIFIGEVPLVVYF*RDADYDGTCVICPK Trigger: CTTCGGGCAGATAACACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 90 bp | TCAGTCAGGTTCAGAAAGAGCTCATCTTCATTGGTGAAGTTCCCTTaGTTGTCTACTTCTGGAGAGATGCAGATTACGATGGCACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVRFRKSSSSLVKFP*LSTSGEMQITMALV Trigger: CACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTTCTGAACCTGACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | TGGCCTAATGCCACTGGTCTGGGACAAATGGTGTGTGAGGCAAACACACTTCCTATAGTATTTGTTGAATaGGTTGGAATGAGGCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: WPNATGLGQMVCEANTLPIVFVE*VGMRPT Trigger: AGTTGGCCTCATTCCAACCAATTCAACAAATACTAT...AGGAAGTGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS-3UTR CAA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCAAGCCTTTCTGCTTCTaGATGAAACCCCACAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSSDFSSTLALLSQLLCVKPFCF*MKPHKC Trigger: GCACTTGTGGGGTTTCATCAAGAAGCAGAAAGGCTT...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS-3UTR CAA 90 bp | GATTCTTCTGACTTTTCTTCAACATTAGCCCTGCTGTCACAATTACTATGTGTCGGTTCTTTCAACTTCTaGAGCTTTCATTTGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSSDFSSTLALLSQLLCVGSFNF*SFHLTW Trigger: CCAGGTCAAATGAAAGCTCAAGAAGTTGAAAGAACC...GACACATAGTAATTGTGACAGCAGGGCTAATGTTGAAGAAAAGTCAGAAGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS CCA 72 bp | GGCAGGGTCGCGGGCCGCCGCCGGGCCTTTTTCCGATaGCCCGACGCCGGCGAGAGTGGGGGTCGCCGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GRVAGRRRAFFR*PDAGESGGRRQ Trigger: TTGCCGGCGACCCCCACTCTCGCCGGCGTCGGGCCATCGGAAAAAGGCCCGGCGGCGGCCCGCGACCCTGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS CAA 72 bp | GGCAACCCGAGCGCCCGCCGCGGTACCGGCGCCGGCTaGTCCTCCGCAGCCGGCTCGGGCTCCACCACGATC | + |
|
Preference number: 6 (lower is better) Translates to: GNPSARRGTGAG*SSAAGSGSTTI Trigger: GATCGTGGTGGAGCCCGAGCCGGCTGCGGAGGACAAGCCGGCGCCGGTACCGCGGCGGGCGCTCGGGTTGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS GCA 72 bp | CTGTGCCGCCTCCCGACCGCCGTGCCCGTCGCACACTaGAAAGAAGGCCACCGAAGAGCGGCGGCGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LCRLPTAVPVAH*KEGHRRAAATA Trigger: TGCTGTCGCCGCCGCTCTTCGGTGGCCTTCTTTGCAGTGTGCGACGGGCACGGCGGTCGGGAGGCGGCACAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 72 bp | CTTGATGAAACCCCACAAGTGCTCCCGGGCAAACTGTaGCGCCTCCCGACCGCCGTGCCCGTCGCACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LDETPQVLPGKL*RLPTAVPVAHC Trigger: GCAGTGTGCGACGGGCACGGCGGTCGGGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS TCA 72 bp | TTGTCCTCCGCAGCCGGCTCGGGCTCCACCACGATCTaGGTTACGTCCTCCATGTACTTCCTCCCGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSAAGSGSTTI*VTSSMYFLPPW Trigger: CCAGGGCGGGAGGAAGTACATGGAGGACGTAACTCAGATCGTGGTGGAGCCCGAGCCGGCTGCGGAGGACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 72 bp | TCTTCCACATGGCGAGGTGACAGGCGAGGAAACCTTTaGGGATGGCAGCGCACACCTTGGCGGGCTCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SSTWRGDRRGNL*GWQRTPWRART Trigger: CGTCCGAGCCCGCCAAGGTGTGCGCTGCCATCCGCAAAGGTTTCCTCGCCTGTCACCTCGCCATGTGGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS CAA 90 bp | GCGCACACCTTGGCGGGCTCGGACGAGGTGAAGCCTTTCTGCTTCTaGATGAAACCCCACAAGTGCTCCCGGGCAAACTGTGCCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AHTLAGSDEVKPFCF*MKPHKCSRANCAAS Trigger: GGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAAGGCTTCACCTCGTCCGAGCCCGCCAAGGTGTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS CAA 72 bp | CAGGCGAGGAAACCTTTGCGGATGGCAGCGCACACCTaGGCGGGCTCGGACGAGGTGAAGCCTTTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QARKPLRMAAHT*AGSDEVKPFCF Trigger: GAAGCAGAAAGGCTTCACCTCGTCCGAGCCCGCCAAGGTGTGCGCTGCCATCCGCAAAGGTTTCCTCGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 72 bp | GTGAAGCCTTTCTGCTTCTTGATGAAACCCCACAAGTaGTCCCGGGCAAACTGTGCCGCCTCCCGACCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VKPFCFLMKPHK*SRANCAASRPP Trigger: CGGCGGTCGGGAGGCGGCACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAAGGCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS CAA 72 bp | TTCCTCTGGCCCCTGAGTCTGCGCCTCAGGGTCAGTTaGACAGAGTGCCTGCGCTGGGATGCTGTAGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FLWPLSLRLRVS*TECLRWDAVGR Trigger: TCTCCCTACAGCATCCCAGCGCAGGCACTCTGTCAAACTGACCCTGAGGCGCAGACTCAGGGGCCAGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 72 bp | CACACCTTGGCGGGCTCGGACGAGGTGAAGCCTTTCTaGTTCTTGATGAAACCCCACAAGTGCTCCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HTLAGSDEVKPF*FLMKPHKCSRA Trigger: TGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAAGGCTTCACCTCGTCCGAGCCCGCCAAGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS TCA 72 bp | TTTGGCCATTCTGCCAGTTTCTTCCACATGGCGAGGTaGCAGGCGAGGAAACCTTTGCGGATGGCAGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FGHSASFFHMAR*QARKPLRMAAH Trigger: GTGCGCTGCCATCCGCAAAGGTTTCCTCGCCTGTCACCTCGCCATGTGGAAGAAACTGGCAGAATGGCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
||
| CDS GCA 72 bp | ATCTGCCCGAAGCATACGCTGCCTCCAGCGGCCAAGTaGTCGATTCACAAGCATTTTGGCACAGGACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ICPKHTLPPAAK*SIHKHFGTGLS Trigger: GGACAGTCCTGTGCCAAAATGCTTGTGAATCGAGCACTTGGCCGCTGGAGGCAGCGTATGCTTCGGGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 72 bp | TTGGCGGGCTCGGACGAGGTGAAGCCTTTCTGCTTCTaGATGAAACCCCACAAGTGCTCCCGGGCAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: LAGSDEVKPFCF*MKPHKCSRANC Trigger: ACAGTTTGCCCGGGAGCACTTGTGGGGTTTCATCAAGAAGCAGAAAGGCTTCACCTCGTCCGAGCCCGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS GCA 72 bp | TGGAGAGATGCAGATTACGATGGCACTTGTGTTATCTaGCCGAAGCATACGCTGCCTCCAGCGGCCAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: WRDADYDGTCVI*PKHTLPPAAKC Trigger: GCACTTGGCCGCTGGAGGCAGCGTATGCTTCGGGCAGATAACACAAGTGCCATCGTAATCTGCATCTCTCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 72 bp | TGTCCCGGACGTGCTGGGAAGACCTGTCATAGTCTTTaGCCATTCTGCCAGTTTCTTCCACATGGCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CPGRAGKTCHSL*PFCQFLPHGEV Trigger: CACCTCGCCATGTGGAAGAAACTGGCAGAATGGCCAAAGACTATGACAGGTCTTCCCAGCACGTCCGGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS TCA 72 bp | TGGTCAATGACTGTGCTCCTTCTGACAGGTCCACTGTaGGTGAGCCGGGGCCTTTTCCAAACTACTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: WSMTVLLLTGPL*VSRGLFQTTRF Trigger: GAACCGAGTAGTTTGGAAAAGGCCCCGGCTCACTCACAGTGGACCTGTCAGAAGGAGCACAGTCATTGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS GCA 72 bp | ACGATGGCACTTGTGTTATCTGCCCGAAGCATACGCTaGCTCCAGCGGCCAAGTGCTCGATTCACAAGCATT | + |
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Preference number: 6 (lower is better) Translates to: TMALVLSARSIR*LQRPSARFTSI Trigger: AATGCTTGTGAATCGAGCACTTGGCCGCTGGAGGCAGCGTATGCTTCGGGCAGATAACACAAGTGCCATCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 90 bp | TCCCTTGGTTGTCTACTTCTGGAGAGATGCAGATTACGATGGCACTaGTGTTATCTGCCCGAAGCATACGCTGCCTCCAGCGGCCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLGCLLLERCRLRWH*CYLPEAYAASSGQV Trigger: CACTTGGCCGCTGGAGGCAGCGTATGCTTCGGGCAGATAACACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS GCA 72 bp | TGGGCCCCGCTACTTCGACTTAAGCCATTTCGTCGGTaGTTCTTCATAAGGGGGCCAGAGTTGGATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: WAPLLRLKPFRR*FFIRGPELDSS Trigger: AGAAGAATCCAACTCTGGCCCCCTTATGAAGAAGCACCGACGAAATGGCTTAAGTCGAAGTAGCGGGGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 72 bp | GCCTCCAGCGGCCAAGTGCTCGATTCACAAGCATTTTaGCACAGGACTGTCCTTGCTCACCCATCAAGTATT | + |
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Preference number: 6 (lower is better) Translates to: ASSGQVLDSQAF*HRTVLAHPSSI Trigger: AATACTTGATGGGTGAGCAAGGACAGTCCTGTGCCAAAATGCTTGTGAATCGAGCACTTGGCCGCTGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 72 bp | TGCCTCCAGCGGCCAAGTGCTCGATTCACAAGCATTTaGGCACAGGACTGTCCTTGCTCACCCATCAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: CLQRPSARFTSI*AQDCPCSPIKY Trigger: ATACTTGATGGGTGAGCAAGGACAGTCCTGTGCCAAAATGCTTGTGAATCGAGCACTTGGCCGCTGGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 72 bp | TATACTTGTGCTTCCGGGGGTCAAGAGTGTGGACACTaGTGTCTGGTTCAGGTGACACCACAAACTTACCAC | + |
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Preference number: 6 (lower is better) Translates to: YTCASGGQECGH*CLVQVTPQTYH Trigger: GTGGTAAGTTTGTGGTGTCACCTGAACCAGACACCAGTGTCCACACTCTTGACCCCCGGAAGCACAAGTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS CAA 72 bp | TGTCTACTTCTGGAGAGATGCAGATTACGATGGCACTaGTGTTATCTGCCCGAAGCATACGCTGCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CLLLERCRLRWH*CYLPEAYAASS Trigger: GCTGGAGGCAGCGTATGCTTCGGGCAGATAACACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 72 bp | CACTGCCGCCAAGTCCTTCGATTCTTTCTCTTTCCTTaGGAAGTTCTGGCTTGTGATCTTGTGTCACCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HCRQVLRFFLFP*EVLACDLVSPP Trigger: TGGAGGTGACACAAGATCACAAGCCAGAACTTCCCAAGGAAAGAGAAAGAATCGAAGGACTTGGCGGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS CCA 72 bp | AGGATAATATACTTGTGCTTCCGGGGGTCAAGAGTGTaGACACTGGTGTCTGGTTCAGGTGACACCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: RIIYLCFRGSRV*TLVSGSGDTTN Trigger: GTTTGTGGTGTCACCTGAACCAGACACCAGTGTCCACACTCTTGACCCCCGGAAGCACAAGTATATTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS CCA 72 bp | CTTGGTTGTCTACTTCTGGAGAGATGCAGATTACGATaGCACTTGTGTTATCTGCCCGAAGCATACGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LGCLLLERCRLR*HLCYLPEAYAA Trigger: GGCAGCGTATGCTTCGGGCAGATAACACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 90 bp | GGTGGAACCATATTCCAAAGTCCATCACTTCCCAGGATAATATACTaGTGCTTCCGGGGGTCAAGAGTGTGGACACTGGTGTCTGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GGTIFQSPSLPRIIY*CFRGSRVWTLVSGS Trigger: TGAACCAGACACCAGTGTCCACACTCTTGACCCCCGGAAGCACAAGTATATTATCCTGGGAAGTGATGGACTTTGGAATATGGTTCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS TCA 72 bp | GGGGTCAAGAGTGTGGACACTGGTGTCTGGTTCAGGTaGCACCACAAACTTACCACTGAAGAAATCATAGCT | + |
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Preference number: 6 (lower is better) Translates to: GVKSVDTGVWFR*HHKLTTEEIIA Trigger: AGCTATGATTTCTTCAGTGGTAAGTTTGTGGTGTCACCTGAACCAGACACCAGTGTCCACACTCTTGACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS TCA 72 bp | TTCTCCTCTTGGTCTTGGCACATGGAGATGGCATCTTaGGGTGGAACCATATTCCAAAGTCCATCACTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FSSWSWHMEMAS*GGTIFQSPSLP Trigger: GGGAAGTGATGGACTTTGGAATATGGTTCCACCTCAAGATGCCATCTCCATGTGCCAAGACCAAGAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS GCA 72 bp | TTCCAAAGTCCATCACTTCCCAGGATAATATACTTGTaGTTCCGGGGGTCAAGAGTGTGGACACTGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: FQSPSLPRIIYL*FRGSRVWTLVS Trigger: AGACACCAGTGTCCACACTCTTGACCCCCGGAAGCACAAGTATATTATCCTGGGAAGTGATGGACTTTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS CCA 72 bp | AGTGTCTCTGAGTCTTTTGAGGTCATCACTACAGTCTaGATATTCCCTCTAGCTATCTCAGCTGGGACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVSESFEVITTV*IFPLAISAGTS Trigger: AGAGGTCCCAGCTGAGATAGCTAGAGGGAATATCCAGACTGTAGTGATGACCTCAAAAGACTCAGAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 72 bp | ATATTCCAAAGTCCATCACTTCCCAGGATAATATACTaGTGCTTCCGGGGGTCAAGAGTGTGGACACTGGTG | + |
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Preference number: 6 (lower is better) Translates to: IFQSPSLPRIIY*CFRGSRVWTLV Trigger: CACCAGTGTCCACACTCTTGACCCCCGGAAGCACAAGTATATTATCCTGGGAAGTGATGGACTTTGGAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS CAA 72 bp | TTTCTCCTCTTGGTCTTGGCACATGGAGATGGCATCTaGAGGTGGAACCATATTCCAAAGTCCATCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: FLLLVLAHGDGI*RWNHIPKSITS Trigger: GGAAGTGATGGACTTTGGAATATGGTTCCACCTCAAGATGCCATCTCCATGTGCCAAGACCAAGAGGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 72 bp | GGGCTATCAGTCAGGTTCAGAAAGAGCTCATCTTCATaGGTGAAGTTCCCTTGGTTGTCTACTTCTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GLSVRFRKSSSS*VKFPWLSTSGE Trigger: CTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTTCTGAACCTGACTGATAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 90 bp | TCCTTCGATTCTTTCTCTTTCCTTGGGAAGTTCTGGCTTGTGATCTaGTGTCACCTCCACAGCTCTCACAAAATCATCCTTTGGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: SFDSFSFLGKFWLVI*CHLHSSHKIILWVI Trigger: GATGACCCAAAGGATGATTTTGTGAGAGCTGTGGAGGTGACACAAGATCACAAGCCAGAACTTCCCAAGGAAAGAGAAAGAATCGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020835.16 ENSMUST00000127717.2 |
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| CDS CAA 90 bp | GTCAGGTTCAGAAAGAGCTCATCTTCATTGGTGAAGTTCCCTTGGTaGTCTACTTCTGGAGAGATGCAGATTACGATGGCACTTGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: VRFRKSSSSLVKFPW*STSGEMQITMALVL Trigger: TAACACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTTCTGAACCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 90 bp | ATCAGTCAGGTTCAGAAAGAGCTCATCTTCATTGGTGAAGTTCCCTaGGTTGTCTACTTCTGGAGAGATGCAGATTACGATGGCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: ISQVQKELIFIGEVP*VVYFWRDADYDGTC Trigger: ACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTTCTGAACCTGACTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS TCA 72 bp | TATCAGTCAGGTTCAGAAAGAGCTCATCTTCATTGGTaGAGTTCCCTTGGTTGTCTACTTCTGGAGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: YQSGSERAHLHW*SSLGCLLLERC Trigger: GCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTTCTGAACCTGACTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 72 bp | AGAAAGAGCTCATCTTCATTGGTGAAGTTCCCTTGGTaGTCTACTTCTGGAGAGATGCAGATTACGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: RKSSSSLVKFPW*STSGEMQITMA Trigger: TGCCATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 72 bp | ATCTTCATTGGTGAAGTTCCCTTGGTTGTCTACTTCTaGAGAGATGCAGATTACGATGGCACTTGTGTTATC | + |
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Preference number: 6 (lower is better) Translates to: IFIGEVPLVVYF*RDADYDGTCVI Trigger: GATAACACAAGTGCCATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 72 bp | TTCAGAAAGAGCTCATCTTCATTGGTGAAGTTCCCTTaGTTGTCTACTTCTGGAGAGATGCAGATTACGATG | + |
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Preference number: 6 (lower is better) Translates to: FRKSSSSLVKFP*LSTSGEMQITM Trigger: CATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CAA 72 bp | GTTCAGAAAGAGCTCATCTTCATTGGTGAAGTTCCCTaGGTTGTCTACTTCTGGAGAGATGCAGATTACGAT | + |
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Preference number: 6 (lower is better) Translates to: VQKELIFIGEVP*VVYFWRDADYD Trigger: ATCGTAATCTGCATCTCTCCAGAAGTAGACAACCAAGGGAACTTCACCAATGAAGATGAGCTCTTTCTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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| CDS CCA 72 bp | TATTCAAAGAATCATGAATCCTTAAAGTCAGGGCTTTaGGGCAATTTTCTTCAAGTGTCTCTGAGTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: YSKNHESLKSGL*GNFLQVSLSLL Trigger: CAAAAGACTCAGAGACACTTGAAGAAAATTGCCCCAAAGCCCTGACTTTAAGGATTCATGATTCTTTGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020835.16 |
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