Pregenerated sensors for PPM1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021096Ensembl transcript IDs: ENSMUST00000021514.10, ENSMUST00000221628.2, ENSMUST00000222896.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAACACCGATGCTGTGCTGTGGAGACCACTTACCCAAGTACTGTaGGCCTACAGGAGGCCCTGCGCTAGGTCCCTCCTGGATGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: VNTDAVLWRPLTQVL*AYRRPCARSLLDAK Trigger: CTTGGCATCCAGGAGGGACCTAGCGCAGGGCCTCCTGTAGGCTCACAGTACTTGGGTAAGTGGTCTCCACAGCACAGCATCGGTGTTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR CCA 90 bp | CCCAAGTACTGTGAGCCTACAGGAGGCCCTGCGCTAGGTCCCTCCTaGATGCCAAGGAACCTGGGACAGCCATTACTTGTGACTTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: PKYCEPTGGPALGPS*MPRNLGQPLLVTCC Trigger: GCAGCAAGTCACAAGTAATGGCTGTCCCAGGTTCCTTGGCATCCAGGAGGGACCTAGCGCAGGGCCTCCTGTAGGCTCACAGTACTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR TCA 90 bp | AAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCAGGCGAAGGTaGGTCCACGGCTGGGTGAGCGGCTTTACCACATATCATCGGTTG | + |
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Preference number: 1 (lower is better) Translates to: KGSARMSWLPLCRRR*VHGWVSGFTTYHRL Trigger: CAACCGATGATATGTGGTAAAGCCGCTCACCCAGCCGTGGACTCACCTTCGCCTGCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221628.2 |
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| 3UTR GCA 90 bp | AAGGTGGACTCCCTGAGAACAAGGACCTACAGTCTCTCTCTACAGTaGCGGGGCGGGGGCGCACTTAACCTAGAACAGTGCTTTGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: KVDSLRTRTYSLSLQ*RGGGALNLEQCFGN Trigger: GTTCCCAAAGCACTGTTCTAGGTTAAGTGCGCCCCCGCCCCGGCACTGTAGAGAGAGACTGTAGGTCCTTGTTCTCAGGGAGTCCACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR TCA 90 bp | TCCAAACAGGGTGTCACTTTGTGGCCCAGTTTATTCTTAAGCCCATaGTCCTCCTGCTGCAGCCTCTCGGGTGCTAGGACCACAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: SKQGVTLWPSLFLSP*SSCCSLSGARTTGT Trigger: TGTGCCTGTGGTCCTAGCACCCGAGAGGCTGCAGCAGGAGGATCATGGGCTTAAGAATAAACTGGGCCACAAAGTGACACCCTGTTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR GCA 90 bp | AAGAGGGATACTGAGGAGCCAGCTGGTGCTGTAGCTACTGGAGTCTaGGACACTTCACAGTGTTTTCCTATACGTCCTCAACCTTACACT | + |
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Preference number: 1 (lower is better) Translates to: KRDTEEPAGAVATGV*DTSQCFPIRPQPYT Trigger: AGTGTAAGGTTGAGGACGTATAGGAAAACACTGTGAAGTGTCGCAGACTCCAGTAGCTACAGCACCAGCTGGCTCCTCAGTATCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR CCA 90 bp | TTTTGGTGGTGTGGGAAATTGAGACAGGATTTTTCTGTGTTGCCCTaGCTGCCCTTGATTGAGCTCAGAGATCAGATTGCTTCTGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: FWWCGKLRQDFSVLP*LPLIELRDQIASAS Trigger: GGAGGCAGAAGCAATCTGATCTCTGAGCTCAATCAAGGGCAGCCAGGGCAACACAGAAAAATCCTGTCTCAATTTCCCACACCACCAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR GCA 90 bp | CCCTCCTGGATGCCAAGGAACCTGGGACAGCCATTACTTGTGACTTaGTGCTGTTGGAAGAGTCATTTATTACAGATAACTGAGTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: PSWMPRNLGQPLLVT*CCWKSHLLQITESS Trigger: AGAGGACTCAGTTATCTGTAATAAATGACTCTTCCAACAGCAGCAAGTCACAAGTAATGGCTGTCCCAGGTTCCTTGGCATCCAGGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR TCA 90 bp | TTTAACATGTACTTTGCTCCCCACTTAAAACACTTAGAAATGAAGTaGTCACAGCTGAGCATCGGCGCGCCACGGTATCTTCCCGTGCAT | + |
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Preference number: 1 (lower is better) Translates to: FNMYFAPHLKHLEMK*SQLSIGAPRYLPVH Trigger: ATGCACGGGAAGATACCGTGGCGCGCCGATGCTCAGCTGTGATCACTTCATTTCTAAGTGTTTTAAGTGGGGAGCAAAGTACATGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR TCA 90 bp | CAGCATACCTGCTTTTATGATGCACACCTCCTTCCTGTAGTTCTATaGCGCCAACTCTTGTGGAAAGATCTAGTCACATCAGGTCACATG | + |
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Preference number: 1 (lower is better) Translates to: QHTCFYDAHLLPVVL*RQLLWKDLVTSGHM Trigger: CATGTGACCTGATGTGACTAGATCTTTCCACAAGAGTTGGCGTCATAGAACTACAGGAAGGAGGTGTGCATCATAAAAGCAGGTATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR CCA 90 bp | TACTTGTTAAATTCTCCAGTAATTTGTTCAGAAAGGAGGGCAGCATaGCCCACTGTGAATACTAGCACACTGAAGAGTCCAACAGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: YLLNSPVICSERRAA*PTVNTSTLKSPTAS Trigger: GGAAGCTGTTGGACTCTTCAGTGTGCTAGTATTCACAGTGGGCCATGCTGCCCTCCTTTCTGAACAAATTACTGGAGAATTTAACAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR CCA 90 bp | GCCACGGTATCTTCCCGTGCATGTGCTATGGAGTTAGCAATGGGCTaGTCAGGTAAAACAATGAATTCTGTTTTTACTCCCACAAACATA | + |
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Preference number: 1 (lower is better) Translates to: ATVSSRACAMELAMG*SGKTMNSVFTPTNI Trigger: TATGTTTGTGGGAGTAAAAACAGAATTCATTGTTTTACCTGACCAGCCCATTGCTAACTCCATAGCACATGCACGGGAAGATACCGTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR GCA 90 bp | TATTCGAATGCTCCACTTACAATACATACAGTAGATTCTAAATTCTaGTCAAAGGTGGACTCCCTGAGAACAAGGACCTACAGTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: YSNAPLTIHTVDSKF*SKVDSLRTRTYSLS Trigger: AGAGAGACTGTAGGTCCTTGTTCTCAGGGAGTCCACCTTTGAGCAGAATTTAGAATCTACTGTATGTATTGTAAGTGGAGCATTCGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR GCA 90 bp | CTGCCCAGAGACACAAAACTTTCAAGAGGTAAGTTAGCAAAAGCCTaGTATGCAGAACTGAATTTCTCACTAACATTAAAGTATACTCTG | + |
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Preference number: 1 (lower is better) Translates to: LPRDTKLSRGKLAKA*YAELNFSLTLKYTL Trigger: CAGAGTATACTTTAATGTTAGTGAGAAATTCAGTTCTGCATAGCAGGCTTTTGCTAACTTACCTCTTGAAAGTTTTGTGTCTCTGGGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR CCA 90 bp | CATGATTACATGTCTTGTTTGTTAAACCAAGCTTTATTGATAAAATaGAATTCGGAATATCTTACTAGGAACAGCAGCAGGCCCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: HDYMSCLLNQALLIK*NSEYLTRNSSRPSQ Trigger: CTGGCTGGGCCTGCTGCTGTTCCTAGTAAGATATTCCGAATTCCATTTTATCAATAAAGCTTGGTTTAACAAACAAGACATGTAATCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR TCA 90 bp | AGTTTTCTTGCTTTAAGCTCAATGCAACACAGTATGACTTGGTCTTaGTCAGTTAATACATGGCCTTTCTTGTTCAACAGAATGAAATTG | + |
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Preference number: 1 (lower is better) Translates to: SFLALSSMQHSMTWS*SVNTWPFLFNRMKL Trigger: CAATTTCATTCTGTTGAACAAGAAAGGCCATGTATTAACTGATCAAGACCAAGTCATACTGTGTTGCATTGAGCTTAAAGCAAGAAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGGTGGACTCCCTGAGAACAAGGACCTACAGTCTCTCTCTACAGTGCCGGACCCCCACACCTGGCTaGCCCACCCCTACTTCTACT | + |
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Preference number: 2 (lower is better) Translates to: SKVDSLRTRTYSLSLQCRTPTPG*PTPTST Trigger: AGTAGAAGTAGGGGTGGGGCAGCCAGGTGTGGGGGT...CCGGCACTGTAGAGAGAGACTGTAGGTCCTTGTTCTCAGGGAGTCCACCTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGCAATATCTTGGCTACGAGGAGAGGACATCCTAGAGACAGGTGAGAGCCAGAGACAGTTTCCATaGGCCTGGGTGACAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SAAISWLRGEDILETGESQRQFP*AWVTAV Trigger: CACAGCTGTCACCCAGGCTCATGGAAACTGTCTCTG...GCTCTCACCTGTCTCTAGGATGTCCTCTCCTCGTAGCCAAGATATTGCAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAATATCTTGGCTACGAGGAGAGGACATCCTAGAGACAGGTGAGAGCGATCAGAGACAGTTTCCATaGGCCTGGGTGACAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: AAISWLRGEDILETGESDQRQFP*AWVTAV Trigger: CACAGCTGTCACCCAGGCTCATGGAAACTGTCTCTG...ATCGCTCTCACCTGTCTCTAGGATGTCCTCTCCTCGTAGCCAAGATATTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAATATCTTGGCTACGAGGAGAGGACATCCTAGAGACAGGTGAGAGCGATCATCCTAGAGACAGGTaGGAGCGATGGCTGTATCAG | + |
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Preference number: 2 (lower is better) Translates to: AAISWLRGEDILETGESDHPRDR*ERWLYQ Trigger: CTGATACAGCCATCGCTCTCACCTGTCTCTAGGATG...ATCGCTCTCACCTGTCTCTAGGATGTCCTCTCCTCGTAGCCAAGATATTGCAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGCAGAGCCAAGGTTCATCGACTGCAGAGCATTCTAATAATACCATTTAGCGCGCTAGGTCCCTCCTaGATGCCAAGGAACCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: YGRAKVHRLQSILIIPFSALGPS*MPRNLG Trigger: TCCCAGGTTCCTTGGCATCCAGGAGGGACCTAGCGC...GCTAAATGGTATTATTAGAATGCTCTGCAGTCGATGAACCTTGGCTCTGCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAAATCCATTCTGGGCTAGCTGTTCCATCGCTGAAGCTGCAGTCCTCACCAAAGAAAATCCATTCTaGGCTAGCTGTTCCATCGCT | + |
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Preference number: 2 (lower is better) Translates to: KENPFWASCSIAEAAVLTKENPF*ASCSIA Trigger: AGCGATGGAACAGCTAGCCCAGAATGGATTTTCTTT...GGTGAGGACTGCAGCTTCAGCGATGGAACAGCTAGCCCAGAATGGATTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
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| 3UTR-3UTR GCA 90 bp | TATGGCAGAGCCAAGGTTCATCGACTGCAGAGCATTCTAATAATACCATTTAGCATCTTCCGATCCACCTaGACCTGGATGCTAACACCA | + |
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Preference number: 2 (lower is better) Translates to: YGRAKVHRLQSILIIPFSIFRST*TWMLTP Trigger: TGGTGTTAGCATCCAGGTGCAGGTGGATCGGAAGAT...GCTAAATGGTATTATTAGAATGCTCTGCAGTCGATGAACCTTGGCTCTGCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTACTAGCTTCCCCACCTTTACAAATAGGTATTCACAACCCAGGACCTCAGAACACTTTACATTGTaGAAAGCTGAGCTTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SVTSFPTFTNRYSQPRTSEHFTL*KAELGW Trigger: CCAGCCAAGCTCAGCTTTCCACAATGTAAAGTGTTC...TGAGGTCCTGGGTTGTGAATACCTATTTGTAAAGGTGGGGAAGCTAGTAACGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR GCA 90 bp | ATTTTAAAGCCATCAGTGATCTTTGCCGGCCCCCTTACTCCAAATCCCAAGTTTAGATCAGATTGCTTCTaGCTCCCAAGAGCTAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: ILKPSVIFAGPLTPNPKFRSDCF*LPRARF Trigger: AAACCTAGCTCTTGGGAGGCAGAAGCAATCTGATCT...AAACTTGGGATTTGGAGTAAGGGGGCCGGCAAAGATCACTGATGGCTTTAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTACTAGCTTCCCCACCTTTACAAATAGGTATTCACAACCCAGGACCTCAAAAGCTGAGCTTGGCTaGTTTACCTGCTCAAACTTA | + |
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Preference number: 2 (lower is better) Translates to: SVTSFPTFTNRYSQPRTSKAELG*FTCSNL Trigger: TAAGTTTGAGCAGGTAAACCAGCCAAGCTCAGCTTT...TGAGGTCCTGGGTTGTGAATACCTATTTGTAAAGGTGGGGAAGCTAGTAACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | AATACACTGTACAAACACTACAGAGGGTCAGCAGCACTCCACAAACAGCTCATTACCCTGCTGGTTAACTaGATAGGAAGAAAGCACATG | + |
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Preference number: 2 (lower is better) Translates to: NTLYKHYRGSAALHKQLITLLVN*IGRKHM Trigger: CATGTGCTTTCTTCCTATCCAGTTAACCAGCAGGGT...AATGAGCTGTTTGTGGAGTGCTGCTGACCCTCTGTAGTGTTTGTACAGTGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR TCA 90 bp | AATACACTGTACAAACACTACAGAGGGTCAGCAGCACTCCACAAACAGCTCATTCAAGCTGCTATAGTGTaGTACACAGCTTTCCATCAT | + |
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Preference number: 2 (lower is better) Translates to: NTLYKHYRGSAALHKQLIQAAIV*YTAFHH Trigger: ATGATGGAAAGCTGTGTATCACACTATAGCAGCTTG...AATGAGCTGTTTGTGGAGTGCTGCTGACCCTCTGTAGTGTTTGTACAGTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR TCA 90 bp | ATTTTAAAGCCATCAGTGATCTTTGCCGGCCCCCTTACTCCAAATCCCAAGTTTAGAAGTGCTCTGAAGTaGAGAGATCAAACAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ILKPSVIFAGPLTPNPKFRSALK*RDQTVS Trigger: AGACACTGTTTGATCTCTTCACTTCAGAGCACTTCT...AAACTTGGGATTTGGAGTAAGGGGGCCGGCAAAGATCACTGATGGCTTTAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR CAA 90 bp | TTGGGTTTGGACCAAAGAAGTGGCAAATGGCAAATAAGACTGAATTaGCCTCAGTCTTGTGCTGACTATCGCCAAAGTAGAAAACAAACC | + |
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Preference number: 2 (lower is better) Translates to: LGLDQRSGKWQIRLN*PQSCADYRQSRKQT Trigger: GGTTTGTTTTCTACTTTGGCGATAGTCAGCACAAGACTGAGGCAAATTCAGTCTTATTTGCCATTTGCCACTTCTTTGGTCCAAACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | TATGGCAGAGCCAAGGTTCATCGACTGCAGAGCATTCTAATAATACCATTTAGCACTTCTACTACTACATaGCCTAAGAAGTTCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: YGRAKVHRLQSILIIPFSTSTTT*PKKFSR Trigger: CCTGCTGAACTTCTTAGGCCATGTAGTAGTAGAAGT...GCTAAATGGTATTATTAGAATGCTCTGCAGTCGATGAACCTTGGCTCTGCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | AATACACTGTACAAACACTACAGAGGGTCAGCAGCACTCCACAAACAGCTCATTGCAGTACTGAAAATCTaGGTTTTTCTGATACTCCAC | + |
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Preference number: 2 (lower is better) Translates to: NTLYKHYRGSAALHKQLIAVLKI*VFLILH Trigger: GTGGAGTATCAGAAAAACCCAGATTTTCAGTACTGC...AATGAGCTGTTTGTGGAGTGCTGCTGACCCTCTGTAGTGTTTGTACAGTGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR TCA 90 bp | TATGGCAGAGCCAAGGTTCATCGACTGCAGAGCATTCTAATAATACCATTTAGCTTCAATCTCAAAAACTaGAGGTTTCCCAGTAGAACG | + |
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Preference number: 2 (lower is better) Translates to: YGRAKVHRLQSILIIPFSFNLKN*RFPSRT Trigger: CGTTCTACTGGGAAACCTTCAGTTTTTGAGATTGAA...GCTAAATGGTATTATTAGAATGCTCTGCAGTCGATGAACCTTGGCTCTGCCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR TCA 90 bp | AATACACTGTACAAACACTACAGAGGGTCAGCAGCACTCCACAAACAGCTCATTGAAAGACATTCTTGGTaGGTTTTATACATCCGTATG | + |
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Preference number: 2 (lower is better) Translates to: NTLYKHYRGSAALHKQLIERHSW*VLYIRM Trigger: CATACGGATGTATAAAACTCACCAAGAATGTCTTTC...AATGAGCTGTTTGTGGAGTGCTGCTGACCCTCTGTAGTGTTTGTACAGTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR GCA 90 bp | CATGTACTTTGCTCCCCACTTAAAACACTTAGAAATGAAGTGATCACAGCTGAGTCTTTCCAGCATACCTaGTTTTATGATGCACACCTC | + |
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Preference number: 2 (lower is better) Translates to: HVLCSPLKTLRNEVITAESFQHT*FYDAHL Trigger: GAGGTGTGCATCATAAAAGCAGGTATGCTGGAAAGA...CTCAGCTGTGATCACTTCATTTCTAAGTGTTTTAAGTGGGGAGCAAAGTACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR GCA 90 bp | TATGGCAGAGCCAAGGTTCATCGACTGCAGAGCATTCTAATAATACCATTTAGCAGCAAAAGCCTGCTATaGAGAACTGAATTTCTCACT | + |
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Preference number: 2 (lower is better) Translates to: YGRAKVHRLQSILIIPFSSKSLL*RTEFLT Trigger: AGTGAGAAATTCAGTTCTGCATAGCAGGCTTTTGCT...GCTAAATGGTATTATTAGAATGCTCTGCAGTCGATGAACCTTGGCTCTGCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR GCA 90 bp | TATGGCAGAGCCAAGGTTCATCGACTGCAGAGCATTCTAATAATACCATTTAGCATGATGTCTGAGAAGTaGTCTGAAGTGAAGAGATCA | + |
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Preference number: 2 (lower is better) Translates to: YGRAKVHRLQSILIIPFSMMSEK*SEVKRS Trigger: TGATCTCTTCACTTCAGAGCACTTCTCAGACATCAT...GCTAAATGGTATTATTAGAATGCTCTGCAGTCGATGAACCTTGGCTCTGCCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | TTTACATTGTGGAAAGCTGAGCTTGGCTGGTTTACCTGCTCAAACTTACATTGTAAAGAAAATCCATTCTaGGCTAGCTGTTCCATCGCT | + |
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Preference number: 2 (lower is better) Translates to: FTLWKAELGWFTCSNLHCKENPF*ASCSIA Trigger: AGCGATGGAACAGCTAGCCCAGAATGGATTTTCTTT...ACAATGTAAGTTTGAGCAGGTAAACCAGCCAAGCTCAGCTTTCCACAATGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTACTAGCTTCCCCACCTTTACAAATAGGTATTCACAACCCAGGACCTCAATGGTATTCAACTTTTaGGGAGAAGCAACTAAATCA | + |
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Preference number: 2 (lower is better) Translates to: SVTSFPTFTNRYSQPRTSMVFNF*GEATKS Trigger: TGATTTAGTTGCTTCTCCCCAAAAGTTGAATACCAT...TGAGGTCCTGGGTTGTGAATACCTATTTGTAAAGGTGGGGAAGCTAGTAACGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR GCA 90 bp | TTTACATTGTGGAAAGCTGAGCTTGGCTGGTTTACCTGCTCAAACTTACATTGTCTAGGGTCAAGTGAATaGACAGTAAGTAATGATGTC | + |
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Preference number: 2 (lower is better) Translates to: FTLWKAELGWFTCSNLHCLGSSE*TVSNDV Trigger: GACATCATTACTTACTGTGCATTCACTTGACCCTAG...ACAATGTAAGTTTGAGCAGGTAAACCAGCCAAGCTCAGCTTTCCACAATGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CCA 90 bp | CATGTACTTTGCTCCCCACTTAAAACACTTAGAAATGAAGTGATCACAGCTGAGGTTGAATTTCAGGAATaGCAAACCTTAGTGTCAACC | + |
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Preference number: 2 (lower is better) Translates to: HVLCSPLKTLRNEVITAEVEFQE*QTLVST Trigger: GGTTGACACTAAGGTTTGCCATTCCTGAAATTCAAC...CTCAGCTGTGATCACTTCATTTCTAAGTGTTTTAAGTGGGGAGCAAAGTACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR CAA 90 bp | TCCCAACTCTATCACAGGTTTAGACATCAAGCATTTATTGTAAGTTaGGGATTGGTTCTGTATTCTGGCTGCTATGAATTTCCAAATATA | + |
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Preference number: 2 (lower is better) Translates to: SQLYHRFRHQAFIVS*GLVLYSGCYEFPNI Trigger: TATATTTGGAAATTCATAGCAGCCAGAATACAGAACCAATCCCAAACTTACAATAAATGCTTGATGTCTAAACCTGTGATAGAGTTGGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR GCA 72 bp | GGAGCCCTGGCTGGCATCCAACTCAACAGATCCGCCTaGCTCTGCCTGCGGATGCTGGGATTAAAGGCGTTC | + |
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Preference number: 3 (lower is better) Translates to: GALAGIQLNRSA*LCLRMLGLKAF Trigger: GAACGCCTTTAATCCCAGCATCCGCAGGCAGAGGCAGGCGGATCTGTTGAGTTGGATGCCAGCCAGGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CAA 90 bp | GCTAGCTGTTCCATCGCTGAAGCTGCAGTCCTCACCCGTGTCAGACCCTCCTGTGAGCTGGCTTCCCCTTaGCAGGCGAAGGTGAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: ASCSIAEAAVLTRVRPSCELASP*QAKVSP Trigger: TGGACTCACCTTCGCCTGCAAAGGGGAAGCCAGCTC...ACAGGAGGGTCTGACACGGGTGAGGACTGCAGCTTCAGCGATGGAACAGCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
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| 3UTR TCA 72 bp | GATGCTGTGCTGTGGAGACCACTTACCCAAGTACTGTaGGCCTACAGGAGGCCCTGCGCTAGGTCCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: DAVLWRPLTQVL*AYRRPCARSLL Trigger: CAGGAGGGACCTAGCGCAGGGCCTCCTGTAGGCTCACAGTACTTGGGTAAGTGGTCTCCACAGCACAGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
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| 3UTR-3UTR CAA 90 bp | GTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCAGGCGAGAGCTGGCTTCCCCTTaGCAGGCGAAGGTGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VMDGKGSARMSWLPLCRRELASP*QAKVSP Trigger: TGGACTCACCTTCGCCTGCAAAGGGGAAGCCAGCTC...TCGCCTGCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 ENSMUST00000222896.2 |
||
| 3UTR TCA 72 bp | GCAAGGATGAGCTGGCTTCCCCTTTGCAGGCGAAGGTaGGTCCACGGCTGGGTGAGCGGCTTTACCACATAT | + |
|
Preference number: 3 (lower is better) Translates to: ARMSWLPLCRRR*VHGWVSGFTTY Trigger: ATATGTGGTAAAGCCGCTCACCCAGCCGTGGACTCACCTTCGCCTGCAAAGGGGAAGCCAGCTCATCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221628.2 |
||
| 3UTR TCA 72 bp | AGAGATAAACTAAGTCTTCTGGGTGACCTACTTCGCTaGAGAAAGTGCTGGGCGAGGTGGAGGTGGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: RDKLSLLGDLLR*RKCWARWRWAP Trigger: TGGTGCCCACCTCCACCTCGCCCAGCACTTTCTTCAGCGAAGTAGGTCACCCAGAAGACTTAGTTTATCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR-3UTR CAA 90 bp | AATACACTGTACAAACACTACAGAGGGTCAGCAGCACTCCACAAACAGCTCATTGAGCTGGCTTCCCCTTaGCAGGCGAAGGTGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NTLYKHYRGSAALHKQLIELASP*QAKVSP Trigger: TGGACTCACCTTCGCCTGCAAAGGGGAAGCCAGCTC...AATGAGCTGTTTGTGGAGTGCTGCTGACCCTCTGTAGTGTTTGTACAGTGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | ACTGAGGAGCCAGCTGGTGCTGTAGCTACTGGAGTCTaGGACACTTCACAGTGTTTTCCTATACGTCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TEEPAGAVATGV*DTSQCFPIRPQ Trigger: TTGAGGACGTATAGGAAAACACTGTGAAGTGTCGCAGACTCCAGTAGCTACAGCACCAGCTGGCTCCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | ACACTGAAGAGTCCAACAGCTTCCTGTGAACACCGATaGTGTGCTGTGGAGACCACTTACCCAAGTACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TLKSPTASCEHR*CAVETTYPSTV Trigger: CACAGTACTTGGGTAAGTGGTCTCCACAGCACAGCATCGGTGTTCACAGGAAGCTGTTGGACTCTTCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | CTGGATGCTAACACCATCATCCAGTTTAAGGAAACATaGCATCTTTCTCTCCCCGAGTGGGGTCTGAAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LDANTIIQFKET*HLSLPEWGLKP Trigger: CGGCTTCAGACCCCACTCGGGGAGAGAAAGATGTCATGTTTCCTTAAACTGGATGATGGTGTTAGCATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | ACAGGATTTTTCTGTGTTGCCCTGGCTGCCCTTGATTaGGCTCAGAGATCAGATTGCTTCTGCCTCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TGFFCVALAALD*AQRSDCFCLPR Trigger: TCTTGGGAGGCAGAAGCAATCTGATCTCTGAGCTCAATCAAGGGCAGCCAGGGCAACACAGAAAAATCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | ATTAGGAGACAGCAGACGTCAATCTTCCGATCCACCTaGACCTGGATGCTAACACCATCATCCAGTTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IRRQQTSIFRST*TWMLTPSSSLR Trigger: CCTTAAACTGGATGATGGTGTTAGCATCCAGGTGCAGGTGGATCGGAAGATTGACGTCTGCTGTCTCCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTAAAGCCATCAGTGATCTTTGCCGGCCCCCTTACTCCAAATCCCAAGTTTAGCTCAGAGATCAGATaGCTTCTGCCTCCCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILKPSVIFAGPLTPNPKFSSEIR*LLPPKS Trigger: GCTCTTGGGAGGCAGAAGCAATCTGATCTCTGAGCT...AAACTTGGGATTTGGAGTAAGGGGGCCGGCAAAGATCACTGATGGCTTTAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTTACTAGCTTCCCCACCTTTACAAATAGGTATTCACAACCCAGGACCTCAATCAGCTGCAATATCTaGGCTACGAGGAGAGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: SVTSFPTFTNRYSQPRTSISCNI*ATRRGH Trigger: ATGTCCTCTCCTCGTAGCCAAGATATTGCAGCTGAT...TGAGGTCCTGGGTTGTGAATACCTATTTGTAAAGGTGGGGAAGCTAGTAACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | TACTTTGCTCCCCACTTAAAACACTTAGAAATGAAGTaGTCACAGCTGAGCATCGGCGCGCCACGGTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: YFAPHLKHLEMK*SQLSIGAPRYL Trigger: AAGATACCGTGGCGCGCCGATGCTCAGCTGTGATCACTTCATTTCTAAGTGTTTTAAGTGGGGAGCAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CCA 72 bp | AGACAGCAGACGTCAATCTTCCGATCCACCTGCACCTaGATGCTAACACCATCATCCAGTTTAAGGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: RQQTSIFRSTCT*MLTPSSSLRKH Trigger: ATGTTTCCTTAAACTGGATGATGGTGTTAGCATCCAGGTGCAGGTGGATCGGAAGATTGACGTCTGCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | GGGAGGAGATGTGTTGAGTTGACCCTAAATGGTAGATaGTCATTTGACAATATGGCAGAGCCAAGGTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: GRRCVELTLNGR*SFDNMAEPRFI Trigger: GATGAACCTTGGCTCTGCCATATTGTCAAATGAGCATCTACCATTTAGGGTCAACTCAACACATCTCCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CCA 72 bp | AATTCTCCAGTAATTTGTTCAGAAAGGAGGGCAGCATaGCCCACTGTGAATACTAGCACACTGAAGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NSPVICSERRAA*PTVNTSTLKSP Trigger: TGGACTCTTCAGTGTGCTAGTATTCACAGTGGGCCATGCTGCCCTCCTTTCTGAACAAATTACTGGAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | CAGAGGGTCTTGAGCAGGCCAGAAAGACATTCTTGGTaGGTTTTATACATCCGTATGCATTTTCCTATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QRVLSRPERHSW*VLYIRMHFPMC Trigger: GCACATAGGAAAATGCATACGGATGTATAAAACTCACCAAGAATGTCTTTCTGGCCTGCTCAAGACCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | CCAAGGAACCTGGGACAGCCATTACTTGTGACTTGCTaGTGTTGGAAGAGTCATTTATTACAGATAACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PRNLGQPLLVTC*CWKSHLLQITE Trigger: CTCAGTTATCTGTAATAAATGACTCTTCCAACAGCAGCAAGTCACAAGTAATGGCTGTCCCAGGTTCCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CCA 72 bp | TCTTCCCGTGCATGTGCTATGGAGTTAGCAATGGGCTaGTCAGGTAAAACAATGAATTCTGTTTTTACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSRACAMELAMG*SGKTMNSVFTP Trigger: GGGAGTAAAAACAGAATTCATTGTTTTACCTGACCAGCCCATTGCTAACTCCATAGCACATGCACGGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR-3UTR CAA 90 bp | AATACACTGTACAAACACTACAGAGGGTCAGCAGCACTCCACAAACAGCTCATTAAACAGGGTGTCACTTaGTGGCCCAGTTTATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: NTLYKHYRGSAALHKQLIKQGVT*WPSLFL Trigger: TAAGAATAAACTGGGCCACAAAGTGACACCCTGTTT...AATGAGCTGTTTGTGGAGTGCTGCTGACCCTCTGTAGTGTTTGTACAGTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | TGCTTTTATGATGCACACCTCCTTCCTGTAGTTCTATaGCGCCAACTCTTGTGGAAAGATCTAGTCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: CFYDAHLLPVVL*RQLLWKDLVTS Trigger: TGATGTGACTAGATCTTTCCACAAGAGTTGGCGTCATAGAACTACAGGAAGGAGGTGTGCATCATAAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | AACAGTGCTTTGGGAACACTTTACATTGTGGAAAGCTaGGCTTGGCTGGTTTACCTGCTCAAACTTACATTG | + |
|
Preference number: 3 (lower is better) Translates to: NSALGTLYIVES*AWLVYLLKLTL Trigger: CAATGTAAGTTTGAGCAGGTAAACCAGCCAAGCTCAGCTTTCCACAATGTAAAGTGTTCCCAAAGCACTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | GCTCCACTTACAATACATACAGTAGATTCTAAATTCTaGTCAAAGGTGGACTCCCTGAGAACAAGGACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: APLTIHTVDSKF*SKVDSLRTRTY Trigger: GTAGGTCCTTGTTCTCAGGGAGTCCACCTTTGAGCAGAATTTAGAATCTACTGTATGTATTGTAAGTGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | ATGCCAAGGAACCTGGGACAGCCATTACTTGTGACTTaGTGCTGTTGGAAGAGTCATTTATTACAGATAACT | + |
|
Preference number: 3 (lower is better) Translates to: MPRNLGQPLLVT*CCWKSHLLQIT Trigger: AGTTATCTGTAATAAATGACTCTTCCAACAGCAGCAAGTCACAAGTAATGGCTGTCCCAGGTTCCTTGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CCA 72 bp | CAGTGGAAATTGGGTTTGGACCAAAGAAGTGGCAAATaGCAAATAAGACTGAATTTGCCTCAGTCTTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QWKLGLDQRSGK*QIRLNLPQSCA Trigger: AGCACAAGACTGAGGCAAATTCAGTCTTATTTGCCATTTGCCACTTCTTTGGTCCAAACCCAATTTCCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | CCAAGCTGCTATAGTGTGATACACAGCTTTCCATCATaGAAGCTTCAATCTCAAAAACTGAAGGTTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSCYSVIHSFPS*KLQSQKLKVSQ Trigger: CTGGGAAACCTTCAGTTTTTGAGATTGAAGCTTTCATGATGGAAAGCTGTGTATCACACTATAGCAGCTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | AGGTCACATGGTCCTTACTCCAACCTTTGGTGTCAATaGCACCAGAGGAATATTCTAACTTCCTTTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RSHGPYSNLWCQ*HQRNILTSFLL Trigger: CAACAAAAAGGAAGTTAGAATATTCCTCTGGTGTCATTGACACCAAAGGTTGGAGTAAGGACCATGTGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTAAAGCCATCAGTGATCTTTGCCGGCCCCCTTACTCCAAATCCCAAGTTTTCCTTTTTGTTGTTGTaGTTGAGACTCTCTGATATC | + |
|
Preference number: 3 (lower is better) Translates to: ILKPSVIFAGPLTPNPKFSFLLL*LRLSDI Trigger: GATATCAGAGAGTCTCAACAACAACAACAAAAAGGA...AAACTTGGGATTTGGAGTAAGGGGGCCGGCAAAGATCACTGATGGCTTTAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | AGCCAAACTTCCAAAACATTTGAGGCATTTGTGTCCTaGGATGGTAATTATCAGGAAAGAGGATGGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SQTSKTFEAFVS*DGNYQERGWHL Trigger: AAGATGCCATCCTCTTTCCTGATAATTACCATCTCAGGACACAAATGCCTCAAATGTTTTGGAAGTTTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CCA 72 bp | AGATTTTTAATGCTCTTGGAGTATCTGGAGCTTTGTTaGAGAAGGAAGTTTTGTCTGTGTAGCCCTACATTG | + |
|
Preference number: 3 (lower is better) Translates to: RFLMLLEYLELC*RRKFCLCSPTL Trigger: CAATGTAGGGCTACACAGACAAAACTTCCTTCTCCAACAAAGCTCCAGATACTCCAAGAGCATTAAAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CCA 72 bp | ATTTCTACTTCACTTTCCGTTGTTGAATTTCAGGAATaGCAAACCTTAGTGTCAACCTCCGTTACTAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ISTSLSVVEFQE*QTLVSTSVTSF Trigger: GAAGCTAGTAACGGAGGTTGACACTAAGGTTTGCCATTCCTGAAATTCAACAACGGAAAGTGAAGTAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGACTATGTCTGTTGTGTCACACAACAAGCCAAATTTCCTTTATCATTCACAGCTGTGTAAGCTTTaGGAATTCTTCCTAATCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SMTMSVVSHNKPNFLYHSQLCKL*EFFLIV Trigger: CACGATTAGGAAGAATTCCAAAAGCTTACACAGCTG...TGAATGATAAAGGAAATTTGGCTTGTTGTGTGACACAACAGACATAGTCATGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| 3UTR TCA 72 bp | ACTTTTGGGGAGAAGCAACTAAATCATTCTGGGAAATaGAGAGATAAACTAAGTCTTCTGGGTGACCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: TFGEKQLNHSGK*RDKLSLLGDLL Trigger: AAGTAGGTCACCCAGAAGACTTAGTTTATCTCTTCATTTCCCAGAATGATTTAGTTGCTTCTCCCCAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | GCTTTAAGCTCAATGCAACACAGTATGACTTGGTCTTaGTCAGTTAATACATGGCCTTTCTTGTTCAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALSSMQHSMTWS*SVNTWPFLFNR Trigger: TCTGTTGAACAAGAAAGGCCATGTATTAACTGATCAAGACCAAGTCATACTGTGTTGCATTGAGCTTAAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | CAGAAAGACATTCTTGGTGAGTTTTATACATCCGTATaGATTTTCCTATGTGCAGTCCCTCAAATTCACATC | + |
|
Preference number: 3 (lower is better) Translates to: QKDILGEFYTSV*IFLCAVPQIHI Trigger: GATGTGAATTTGAGGGACTGCACATAGGAAAATGCATACGGATGTATAAAACTCACCAAGAATGTCTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR TCA 72 bp | CATCGACTGCAGAGCATTCTAATAATACCATTTAGCTaGGCGACTGATCAACACAACAATAAAGTACTATAC | + |
|
Preference number: 3 (lower is better) Translates to: HRLQSILIIPFS*ATDQHNNKVLY Trigger: GTATAGTACTTTATTGTTGTGTTGATCAGTCGCTCAGCTAAATGGTATTATTAGAATGCTCTGCAGTCGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | CCGTGCTGTTTGAAGTATAAAATCAAGATCCAACTTTaGTTTACAGCCACACGATCTTGTATACAAATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PCCLKYKIKIQL*FTATRSCIQIG Trigger: TCCTATTTGTATACAAGATCGTGTGGCTGTAAAGCAAAGTTGGATCTTGATTTTATACTTCAAACAGCACGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR GCA 72 bp | GACACAAAACTTTCAAGAGGTAAGTTAGCAAAAGCCTaGTATGCAGAACTGAATTTCTCACTAACATTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DTKLSRGKLAKA*YAELNFSLTLK Trigger: CTTTAATGTTAGTGAGAAATTCAGTTCTGCATAGCAGGCTTTTGCTAACTTACCTCTTGAAAGTTTTGTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CCA 72 bp | ATGTCTTGTTTGTTAAACCAAGCTTTATTGATAAAATaGAATTCGGAATATCTTACTAGGAACAGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MSCLLNQALLIK*NSEYLTRNSSR Trigger: CCTGCTGCTGTTCCTAGTAAGATATTCCGAATTCCATTTTATCAATAAAGCTTGGTTTAACAAACAAGACAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCTTTGCAGGCGAAGGTGAGTCCACGGCTGGGTGAGCGGCTTTACCACATAGCCAACCTTGCATGCTaGTTAGGCCGTATCGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SPLQAKVSPRLGERLYHIANLAC*LGRIVT Trigger: GGTTACGATACGGCCTAAGCAGCATGCAAGGTTGGC...TATGTGGTAAAGCCGCTCACCCAGCCGTGGACTCACCTTCGCCTGCAAAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGCTGTTCCATCGCTGAAGCTGCAGTCCTCACCCGTGTCAGACCCTCCTGTTACATTCCGCTTGCTTaGCAATTCACCCCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASCSIAEAAVLTRVRPSCYIPLA*QFTPWW Trigger: CCACCAGGGGGTGAATTGGCAAGCAAGCGGAATGTA...ACAGGAGGGTCTGACACGGGTGAGGACTGCAGCTTCAGCGATGGAACAGCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CCA 90 bp | TCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCAGGAACGTGCGCATCACGTaGACTAAGTCAGGGACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVMDGKGSARMSWLPLCRNVRIT*TKSGTP Trigger: AGGCGTCCCTGACTTAGTCCACGTGATGCGCACGTT...CCTGCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCTTTGCAGGCGAAGGTGAGTCCACGGCTGGGTGAGCGGCTTTACCACATAGTTCTCCACAGAAGGTaGTCCTGCAGATCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPLQAKVSPRLGERLYHIVLHRR*SCRSSE Trigger: TTCAGAGGATCTGCAGGAGCACCTTCTGTGGAGAAC...TATGTGGTAAAGCCGCTCACCCAGCCGTGGACTCACCTTCGCCTGCAAAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | GTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCAGGCGATCTGGGGAGACAAGCTaGTCTGTGGGACCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VMDGKGSARMSWLPLCRRSGETS*SVGPFP Trigger: TGGAAAAGGTCCCACAGAGCAGCTTGTCTCCCCAGA...TCGCCTGCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTTTGCAGGCGAAGGTGAGTCCACGGCTGGGTGAGCGGCTTTACCACATAGACCTTTCAATATCATaGACTTCGGGCTCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLQAKVSPRLGERLYHIDLSIS*TSGSGE Trigger: CTCCCCAGAGCCCGAAGTCCATGATATTGAAAGGTC...TATGTGGTAAAGCCGCTCACCCAGCCGTGGACTCACCTTCGCCTGCAAAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGACCCTCCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGGCCAACCTTGCATGCTaGTTAGGCCGTATCGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: VSDPPVKSVMDGKGSARMANLAC*LGRIVT Trigger: GGTTACGATACGGCCTAAGCAGCATGCAAGGTTGGC...CATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGGAGGGTCTGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCTCTGGGGAGACAAGCTaGTCTGTGGGACCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSVMDGKGSARMSWLPLCSGETS*SVGPFP Trigger: TGGAAAAGGTCCCACAGAGCAGCTTGTCTCCCCAGA...GCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCAGGCGACCTCTGCCGAGACTTTaGGTGCACTTGGAAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VMDGKGSARMSWLPLCRRPLPRL*VHLENR Trigger: TCTGTTTTCCAAGTGCACCCAAAGTCTCGGCAGAGG...TCGCCTGCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 ENSMUST00000222896.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCAGACCCTCCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGGAGCCCCCTGCATTCTaGATTCGTTCTTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSDPPVKSVMDGKGSARMEPPAF*IRSFSS Trigger: GCTGGAAAAAGAACGAATTCAGAATGCAGGGGGCTC...CATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGGAGGGTCTGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCTGCCCCTGGGCATTATaGTTCTCCATCTTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSVMDGKGSARMSWLPLCCPWAL*FSIFGL Trigger: CAAGCCAAAGATGGAGAAGCATAATGCCCAGGGGCA...GCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCCCCTGGGCATTATaGTTCTCCATCTTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKSVMDGKGSARMSWLPLCPWAL*FSIFGL Trigger: CAAGCCAAAGATGGAGAAGCATAATGCCCAGGGGCA...AAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCTCAACTCGCCAACCTTaGATGCTGCTTAGGCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KSVMDGKGSARMSWLPLCSTRQP*MLLRPY Trigger: ATACGGCCTAAGCAGCATGCAAGGTTGGCGAGTTGA...GCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTGTTCTCCACAGAAGGTaGTCCTGCAGATCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKSVMDGKGSARMSWLPLVLHRR*SCRSSE Trigger: TTCAGAGGATCTGCAGGAGCACCTTCTGTGGAGAAC...AAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR TCA 90 bp | GTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCAGGCGATCTCAAGGTCATCAGTaGCTTCAAGTCTGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VMDGKGSARMSWLPLCRRSQGHQ*LQVWIS Trigger: TGAGATCCAGACTTGAAGTCACTGATGACCTTGAGA...TCGCCTGCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCTGCCGAGACTTTGGGTaGACTTGGAAAACAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVKSVMDGKGSARMSWLPCRDFG*TWKTDQ Trigger: TTGATCTGTTTTCCAAGTGCACCCAAAGTCTCGGCA...GGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCAGAATCCTTCTACTCTaGTCTCCAGGTACTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVKSVMDGKGSARMSWLPRILLL*SPGTCP Trigger: TGGACAAGTACCTGGAGAGCAGAGTAGAAGGATTCT...GGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222896.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGCAATATCTTGGCTACGAGGAGAGGACATCCTAGAGACAGGTGAGAGCGAGCCCCCTGCATTCTaGATTCGTTCTTTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAAISWLRGEDILETGESEPPAF*IRSFSS Trigger: GCTGGAAAAAGAACGAATTCAGAATGCAGGGGGCTC...GCTCTCACCTGTCTCTAGGATGTCCTCTCCTCGTAGCCAAGATATTGCAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR TCA 90 bp | AAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCTCTCAAGGTCATCAGTaGCTTCAAGTCTGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSVMDGKGSARMSWLPLCSQGHQ*LQVWIS Trigger: TGAGATCCAGACTTGAAGTCACTGATGACCTTGAGA...GCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGACCCTCCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGTGCCGAGACTTTGGGTaGACTTGGAAAACAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSDPPVKSVMDGKGSARMCRDFG*TWKTDQ Trigger: TTGATCTGTTTTCCAAGTGCACCCAAAGTCTCGGCA...CATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGGAGGGTCTGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 ENSMUST00000222896.2 |
||
| CDS-3UTR TCA 90 bp | TCAGACCCTCCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGTTATTGGTGATGTaGTCTAACAAGTGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SDPPVKSVMDGKGSARMSWLLVM*SNKCSQ Trigger: CTGTGAGCACTTGTTAGATCACATCACCAATAACCA...GCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGGAGGGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAATCCATTCTGGGCTAGCTGTTCCATCGCTGAAGCTGCAGTCCTCACCTGCCCCTGGGCATTATaGTTCTCCATCTTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KENPFWASCSIAEAAVLTCPWAL*FSIFGL Trigger: CAAGCCAAAGATGGAGAAGCATAATGCCCAGGGGCA...GGTGAGGACTGCAGCTTCAGCGATGGAACAGCTAGCCCAGAATGGATTTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGTGGACTCCCTGAGAACAAGGACCTACAGTCTCTCTCTACAGTGCCGGTGCCGAGACTTTGGGTaGACTTGGAAAACAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKVDSLRTRTYSLSLQCRCRDFG*TWKTDQ Trigger: TTGATCTGTTTTCCAAGTGCACCCAAAGTCTCGGCA...CCGGCACTGTAGAGAGAGACTGTAGGTCCTTGTTCTCAGGGAGTCCACCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CCA 90 bp | GTGTCAGACCCTCCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGTTCCAGCGGGTTACTTaGTTTATGGTCTTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSDPPVKSVMDGKGSARMFQRVT*FMVLCE Trigger: TTCACACAAGACCATAAACCAAGTAACCCGCTGGAA...CATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGGAGGGTCTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| 3UTR CAA 72 bp | CACGGCTGGGTGAGCGGCTTTACCACATATCATCGGTaGACGCAGAATCAGTGTCGTCATTTTTGTAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGWVSGFTTYHR*TQNQCRHFCKG Trigger: ACCCTTACAAAAATGACGACACTGATTCTGCGTCAACCGATGATATGTGGTAAAGCCGCTCACCCAGCCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221628.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGTGGACTCCCTGAGAACAAGGACCTACAGTCTCTCTCTACAGTGCCGGTGGTTATTGGTGATGTaGTCTAACAAGTGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SKVDSLRTRTYSLSLQCRWLLVM*SNKCSQ Trigger: CTGTGAGCACTTGTTAGATCACATCACCAATAACCA...CCGGCACTGTAGAGAGAGACTGTAGGTCCTTGTTCTCAGGGAGTCCACCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR TCA 90 bp | TTTACATTGTGGAAAGCTGAGCTTGGCTGGTTTACCTGCTCAAACTTACATTGTCAGCCAGAGAGCCATTaGCACGCTGAATCATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: FTLWKAELGWFTCSNLHCQPESH*HAESSP Trigger: CGGTGATGATTCAGCGTGTCAATGGCTCTCTGGCTG...ACAATGTAAGTTTGAGCAGGTAAACCAGCCAAGCTCAGCTTTCCACAATGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CCA 90 bp | AAAGAAAATCCATTCTGGGCTAGCTGTTCCATCGCTGAAGCTGCAGTCCTCACCGACTTTGGGTGCACTTaGAAAACAGATCAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KENPFWASCSIAEAAVLTDFGCT*KTDQNH Trigger: GTGATTTTGATCTGTTTTCCAAGTGCACCCAAAGTC...GGTGAGGACTGCAGCTTCAGCGATGGAACAGCTAGCCCAGAATGGATTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| 3UTR CAA 72 bp | GATGCCAAGGAACCTGGGACAGCCATTACTTGTGACTaGCTGCTGTTGGAAGAGTCATTTATTACAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: DAKEPGTAITCD*LLLEESFITDN Trigger: GTTATCTGTAATAAATGACTCTTCCAACAGCAGCAAGTCACAAGTAATGGCTGTCCCAGGTTCCTTGGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CAA 72 bp | GACCAAAGAAGTGGCAAATGGCAAATAAGACTGAATTaGCCTCAGTCTTGTGCTGACTATCGCCAAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DQRSGKWQIRLN*PQSCADYRQSR Trigger: TCTACTTTGGCGATAGTCAGCACAAGACTGAGGCAAATTCAGTCTTATTTGCCATTTGCCACTTCTTTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CCA 90 bp | TCCAGACACAGCATGACTATGTCTGTTGTGTCACACAACAAGCCAAATTTCCTTTTCCAGCGGGTTACTTaGTTTATGGTCTTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRHSMTMSVVSHNKPNFLFQRVT*FMVLCE Trigger: TTCACACAAGACCATAAACCAAGTAACCCGCTGGAA...AAGGAAATTTGGCTTGTTGTGTGACACAACAGACATAGTCATGCTGTGTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CCA 90 bp | AGCATGACTATGTCTGTTGTGTCACACAACAAGCCAAATTTCCTTTATCATTCAGACCTTTCAATATCATaGACTTCGGGCTCTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMTMSVVSHNKPNFLYHSDLSIS*TSGSGE Trigger: CTCCCCAGAGCCCGAAGTCCATGATATTGAAAGGTC...TGAATGATAAAGGAAATTTGGCTTGTTGTGTGACACAACAGACATAGTCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CCA 90 bp | AGCATGACTATGTCTGTTGTGTCACACAACAAGCCAAATTTCCTTTATCATTCACCTCTGCCGAGACTTTaGGTGCACTTGGAAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMTMSVVSHNKPNFLYHSPLPRL*VHLENR Trigger: TCTGTTTTCCAAGTGCACCCAAAGTCTCGGCAGAGG...TGAATGATAAAGGAAATTTGGCTTGTTGTGTGACACAACAGACATAGTCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| 3UTR CAA 72 bp | TGCTTTGGGAACACTTTACATTGTGGAAAGCTGAGCTaGGCTGGTTTACCTGCTCAAACTTACATTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFGNTLHCGKLS*AGLPAQTYIVS Trigger: ACTTACAATGTAAGTTTGAGCAGGTAAACCAGCCAAGCTCAGCTTTCCACAATGTAAAGTGTTCCCAAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CAA 72 bp | GTAACAGAGGGTCTTGAGCAGGCCAGAAAGACATTCTaGGTGAGTTTTATACATCCGTATGCATTTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTEGLEQARKTF*VSFIHPYAFSY Trigger: ATAGGAAAATGCATACGGATGTATAAAACTCACCAAGAATGTCTTTCTGGCCTGCTCAAGACCCTCTGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR GCA 90 bp | AACAAAAATTGCTGGAGTCTGATTTACAACATGAATTACGGTTTGAAATCACGCTCAACTCGCCAACCTTaGATGCTGCTTAGGCCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKNCWSLIYNMNYGLKSRSTRQP*MLLRPY Trigger: ATACGGCCTAAGCAGCATGCAAGGTTGGCGAGTTGA...GCGTGATTTCAAACCGTAATTCATGTTGTAAATCAGACTCCAGCAATTTTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR GCA 90 bp | AGCATGACTATGTCTGTTGTGTCACACAACAAGCCAAATTTCCTTTATCATTCACAATTACATTCCGCTTaGTTGCCAATTCACCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMTMSVVSHNKPNFLYHSQLHSA*LPIHPL Trigger: CAGGGGGTGAATTGGCAAGCAAGCGGAATGTAATTG...TGAATGATAAAGGAAATTTGGCTTGTTGTGTGACACAACAGACATAGTCATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CCA 90 bp | AACAAAAATTGCTGGAGTCTGATTTACAACATGAATTACGGTTTGAAATCACGCCCTCTGCCGAGACTTTaGGTGCACTTGGAAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKNCWSLIYNMNYGLKSRPLPRL*VHLENR Trigger: TCTGTTTTCCAAGTGCACCCAAAGTCTCGGCAGAGG...GCGTGATTTCAAACCGTAATTCATGTTGTAAATCAGACTCCAGCAATTTTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| 3UTR CAA 72 bp | AGAGGTGCAAGAGAATCAAGGCATGTTAGCCCAAAATaGATAGATACTCTCATGAATATACAGGATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGARESRHVSPK*IDTLMNIQDQL Trigger: CAGCTGATCCTGTATATTCATGAGAGTATCTATCAATTTTGGGCTAACATGCCTTGATTCTCTTGCACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| 3UTR CAA 72 bp | GTTAATACATGGCCTTTCTTGTTCAACAGAATGAAATaGGGCTCTCTCTATTTAAGAATGGGAAGAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VNTWPFLFNRMK*GSLYLRMGREK Trigger: CTTCTCTCTTCCCATTCTTAAATAGAGAGAGCCCAATTTCATTCTGTTGAACAAGAAAGGCCATGTATTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| 3UTR CAA 72 bp | TATCACAGGTTTAGACATCAAGCATTTATTGTAAGTTaGGGATTGGTTCTGTATTCTGGCTGCTATGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YHRFRHQAFIVS*GLVLYSGCYEF Trigger: AAATTCATAGCAGCCAGAATACAGAACCAATCCCAAACTTACAATAAATGCTTGATGTCTAAACCTGTGATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CAA 90 bp | GTGTCAGACCCTCCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGGCCTCTGCCGAGACTTaGGGTGCACTTGGAAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: VSDPPVKSVMDGKGSARMASAET*GALGKQ Trigger: CTGTTTTCCAAGTGCACCCAAAGTCTCGGCAGAGGC...CATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGGAGGGTCTGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 ENSMUST00000222896.2 |
||
| CDS-3UTR CAA 90 bp | TCAGACCCTCCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTCAATTACATTCCGCTaGCTTGCCAATTCACCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDPPVKSVMDGKGSARMSSITFR*LANSPP Trigger: AGGGGGTGAATTGGCAAGCAAGCGGAATGTAATTGA...GCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGGAGGGTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CAA 90 bp | AAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCCTTTGCTATGCTTCTCCATCTTaGGCTTGTCTAAAAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSVMDGKGSARMSWLPLCYASPS*ACLKML Trigger: GAGCATTTTTAGACAAGCCAAAGATGGAGAAGCATA...GCAAAGGGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 ENSMUST00000222896.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGAAGTCGGTGATGGATGGTAAAGGCTCGGCAAGGATGAGCTGGCTTCCCACTTGGTTTATGGTCTaGTGTGAAGAAGTGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVKSVMDGKGSARMSWLPTWFMV*CEEVNF Trigger: AAAGTTCACTTCTTCACACAAGACCATAAACCAAGT...GGGAAGCCAGCTCATCCTTGCCGAGCCTTTACCATCCATCACCGACTTCACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000222896.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGACACAGCATGACTATGTCTGTTGTGTCACACAACAAGCCAAATTTCCTTGCCTCTGCCGAGACTTaGGGTGCACTTGGAAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRHSMTMSVVSHNKPNFLASAET*GALGKQ Trigger: CTGTTTTCCAAGTGCACCCAAAGTCTCGGCAGAGGC...AAGGAAATTTGGCTTGTTGTGTGACACAACAGACATAGTCATGCTGTGTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCAATATCTTGGCTACGAGGAGAGGACATCCTAGAGACAGGTGAGAGCGATAAAATCACACTCATGTaGTCTCGACTTCCCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AAISWLRGEDILETGESDKITLM*SRLPLH Trigger: ATGCAAGGGAAGTCGAGACAACATGAGTGTGATTTT...ATCGCTCTCACCTGTCTCTAGGATGTCCTCTCCTCGTAGCCAAGATATTGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221628.2 |
||
| CDS-3UTR CAA 90 bp | AACAAAAATTGCTGGAGTCTGATTTACAACATGAATTACGGTTTGAAATCACGCGCCTCTGCCGAGACTTaGGGTGCACTTGGAAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: NKNCWSLIYNMNYGLKSRASAET*GALGKQ Trigger: CTGTTTTCCAAGTGCACCCAAAGTCTCGGCAGAGGC...GCGTGATTTCAAACCGTAATTCATGTTGTAAATCAGACTCCAGCAATTTTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGACACAGCATGACTATGTCTGTTGTGTCACACAACAAGCCAAATTTCCTTACTTGGTTTATGGTCTaGTGTGAAGAAGTGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRHSMTMSVVSHNKPNFLTWFMV*CEEVNF Trigger: AAAGTTCACTTCTTCACACAAGACCATAAACCAAGT...AAGGAAATTTGGCTTGTTGTGTGACACAACAGACATAGTCATGCTGTGTCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021514.10 |
||
| CDS-3UTR CAA 90 bp | AGCATGACTATGTCTGTTGTGTCACACAACAAGCCAAATTTCCTTTATCATTCATATGCTTCTCCATCTTaGGCTTGTCTAAAAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SMTMSVVSHNKPNFLYHSYASPS*ACLKML Trigger: GAGCATTTTTAGACAAGCCAAAGATGGAGAAGCATA...TGAATGATAAAGGAAATTTGGCTTGTTGTGTGACACAACAGACATAGTCATGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021514.10 ENSMUST00000221628.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCGTCATTTTTGTAAGGGTTCAGTCTATTGTAAACGGCTTCAATTACATTATGCTTCTCCATCTTaGGCTTGTCTAAAAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QCRHFCKGSVYCKRLQLHYASPS*ACLKML Trigger: GAGCATTTTTAGACAAGCCAAAGATGGAGAAGCATA...ATGTAATTGAAGCCGTTTACAATAGACTGAACCCTTACAAAAATGACGACACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221628.2 |
||
| CDS GCA 72 bp | CAAAATCACACTCATGTTGTCTCGACTTCCCTTGCATaGTGCTTAGGCCGTATCGTAACCCATTCCCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QNHTHVVSTSLA*CLGRIVTHSPA Trigger: GGCAGGGGAATGGGTTACGATACGGCCTAAGCAGCATGCAAGGGAAGTCGAGACAACATGAGTGTGATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221628.2 |
||