RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039457

Ensembl transcript IDs: ENSMUST00000035672.5

Found 492 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAATGGCAAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTaGGTTGAAAGAGGCAGAAAGGTTATTAAGTCATCAGAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: EWQEGRSAAPVDQSC*VERGRKVIKSSEVG
Trigger: TCCCACCTCTGATGACTTAATAACCTTTCTGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTTGCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 90 bp TGGCACATCCTGGCTAGTTATTCTAGCACCAAGAGCCAGGCATTGTaGATTCTGGACACATGTTCTAGTGTAGAGCCCTGTTCAATGAGA +
Preference number: 1 (lower is better)
Translates to: WHILASYSSTKSQAL*ILDTCSSVEPCSMR
Trigger: TCTCATTGAACAGGGCTCTACACTAGAACATGTGTCCAGAATCCACAATGCCTGGCTCTTGGTGCTAGAATAACTAGCCAGGATGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 90 bp CAGTCAGAAAAATGGAATGGCAAGAAGGAAGGTCAGCAGCCCCAGTaGACCAGTCTTGTTGAGTTGAAAGAGGCAGAAAGGTTATTAAGT +
Preference number: 1 (lower is better)
Translates to: QSEKWNGKKEGQQPQ*TSLVELKEAERLLS
Trigger: ACTTAATAACCTTTCTGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTTGCCATTCCATTTTTCTGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR TCA 90 bp TGTTCAATGAGAAAAGTCACTACTGAGCAGGCACTGTTGATAGTTTaGTCCCAGTCAGAAAAATGGAATGGCAAGAAGGAAGGTCAGCAG +
Preference number: 1 (lower is better)
Translates to: CSMRKVTTEQALLIV*SQSEKWNGKKEGQQ
Trigger: CTGCTGACCTTCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGCTCAGTAGTGACTTTTCTCATTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR TCA 90 bp GAGAGCCAAGGTTCAGGCTCATATGTAAAGGAGTCATACTTGCTGTaGGTTAGAGTCAAGCCACCAGATTTTTATTTTCATGCCATAAAG +
Preference number: 1 (lower is better)
Translates to: ESQGSGSYVKESYLL*VRVKPPDFYFHAIK
Trigger: CTTTATGGCATGAAAATAAAAATCTGGTGGCTTGACTCTAACTCACAGCAAGTATGACTCCTTTACATATGAGCCTGAACCTTGGCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CAA 90 bp GGCAAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTaGAAAGAGGCAGAAAGGTTATTAAGTCATCAGAGGTGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: GKKEGQQPQWTSLVE*KEAERLLSHQRWEQ
Trigger: CTGCTCCCACCTCTGATGACTTAATAACCTTTCTGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR-3UTR GCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCATACCCAGCTAGTGTCTaGTGGTATTACAGTAGCTGC +
Preference number: 2 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAYPASV*WYYSSC
Trigger: GCAGCTACTGTAATACCAGCAGACACTAGCTGGGTA...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTAAGTCATCAGAGGTaGGAGCAGGTCACTCACTCA +
Preference number: 2 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGLSHQR*EQVTHS
Trigger: TGAGTGAGTGACCTGCTCCCACCTCTGATGACTTAA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR-3UTR TCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAGTGGACCAGTCTTGTTaGGTTGAAAGAGGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGVDQSC*VERGRK
Trigger: CTTTCTGCCTCTTTCAACTCAACAAGACTGGTCCAC...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR-3UTR CCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTCAGCCTGATACAATGTaGATAAAACACTTAGCTCAG +
Preference number: 2 (lower is better)
Translates to: SELANCCWCLSFWHILASQPDTM*IKHLAQ
Trigger: CTGAGCTAAGTGTTTTATCCACATTGTATCAGGCTG...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR-3UTR CCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCAAGAGCCAGGCATTGTaGATTCTGGACACATGTTCT +
Preference number: 2 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAKSQAL*ILDTCS
Trigger: AGAACATGTGTCCAGAATCCACAATGCCTGGCTCTT...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR-3UTR TCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCCAGTCTTGTTGAGTTaGAAGAGGCAGAAAGGTTAT +
Preference number: 2 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFPVLLS*KRQKGY
Trigger: ATAACCTTTCTGCCTCTTTCAACTCAACAAGACTGG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 72 bp AAATGGAATGGCAAGAAGGAAGGTCAGCAGCCCCAGTaGACCAGTCTTGTTGAGTTGAAAGAGGCAGAAAGG +
Preference number: 3 (lower is better)
Translates to: KWNGKKEGQQPQ*TSLVELKEAER
Trigger: CCTTTCTGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTTGCCATTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 72 bp TTGAAAGAGGCAGAAAGGTTATTAAGTCATCAGAGGTaGGAGCAGGTCACTCACTCAGACTGGATGAGGCTG +
Preference number: 3 (lower is better)
Translates to: LKEAERLLSHQR*EQVTHSDWMRL
Trigger: CAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGACTTAATAACCTTTCTGCCTCTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 72 bp ACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATaGCAAGAAGGAAGGTCAGCAGCCCCAGTGGACCAG +
Preference number: 3 (lower is better)
Translates to: TVDSLIPVRKME*QEGRSAAPVDQ
Trigger: CTGGTCCACTGGGGCTGCTGACCTTCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 72 bp CTGGCTAGTTATTCTAGCACCAAGAGCCAGGCATTGTaGATTCTGGACACATGTTCTAGTGTAGAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: LASYSSTKSQAL*ILDTCSSVEPC
Trigger: ACAGGGCTCTACACTAGAACATGTGTCCAGAATCCACAATGCCTGGCTCTTGGTGCTAGAATAACTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 72 bp CAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTaGCTAGTTATTCTAGCACCAAGAGCCAGGCATTGT +
Preference number: 3 (lower is better)
Translates to: QTVVGACLSGTS*LVILAPRARHC
Trigger: ACAATGCCTGGCTCTTGGTGCTAGAATAACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR TCA 72 bp GAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTaGGTTGAAAGAGGCAGAAAGGTTATTAAGTCATCA +
Preference number: 3 (lower is better)
Translates to: EGRSAAPVDQSC*VERGRKVIKSS
Trigger: TGATGACTTAATAACCTTTCTGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 72 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTaGCACATCCTGGCTAGTTATTCTAGCACCAAGAGC +
Preference number: 3 (lower is better)
Translates to: SELANCCWCLSF*HILASYSSTKS
Trigger: GCTCTTGGTGCTAGAATAACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR-3UTR CAA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTACCAAGAGCCAGGCATaGTGGATTCTGGACACATGT +
Preference number: 3 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFTKSQA*WILDTC
Trigger: ACATGTGTCCAGAATCCACAATGCCTGGCTCTTGGT...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR TCA 72 bp AGAAAAGTCACTACTGAGCAGGCACTGTTGATAGTTTaGTCCCAGTCAGAAAAATGGAATGGCAAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: RKVTTEQALLIV*SQSEKWNGKKE
Trigger: TTCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGCTCAGTAGTGACTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR GCA 72 bp ACTAAGATCTTTTCAGAACTAGCAAACTGTTGTTGGTaGCTGTCTTTCTGGCACATCCTGGCTAGTTATTCT +
Preference number: 3 (lower is better)
Translates to: TKIFSELANCCW*LSFWHILASYS
Trigger: AGAATAACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAGATCTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CCA 72 bp ATTACTAAGATCTTTTCAGAACTAGCAAACTGTTGTTaGTGCCTGTCTTTCTGGCACATCCTGGCTAGTTAT +
Preference number: 3 (lower is better)
Translates to: ITKIFSELANCC*CLSFWHILASY
Trigger: ATAACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAGATCTTAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR TCA 72 bp GGTTCAGGCTCATATGTAAAGGAGTCATACTTGCTGTaGGTTAGAGTCAAGCCACCAGATTTTTATTTTCAT +
Preference number: 3 (lower is better)
Translates to: GSGSYVKESYLL*VRVKPPDFYFH
Trigger: ATGAAAATAAAAATCTGGTGGCTTGACTCTAACTCACAGCAAGTATGACTCCTTTACATATGAGCCTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGACATCGTAGGCAGCCCTaGCACTCTGCAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRHRRQP*HSAGSG
Trigger: CCCAGAGCCTGCAGAGTGCCAGGGCTGCCTACGATG...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAACTGCATGCGGCCCTTaGCTTGCTGGTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRTACGP*LAGPAS
Trigger: ACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGT...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAGCACTCTGCAGGCTCTaGGCCCTCCGTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAALCRL*ALRSTC
Trigger: GCAGGTGGAACGGAGGGCCCAGAGCCTGCAGAGTGC...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAGGCCAGAGCGTGCCTTaGCAGCCTCGTCCTCATACT +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRGQSVP*QPRPHT
Trigger: AGTATGAGGACGAGGCTGCCAAGGCACGCTCTGGCC...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCATCTCGCGGCGGTACTTaGGTGGCACCACTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEASRGGT*VAPLAA
Trigger: GGCAGCAAGTGGTGCCACTCAAGTACCGCCGCGAGA...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCGCAGCCCTGGCACTCTaGAGGCTCTGGGCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGAALAL*RLWALR
Trigger: ACGGAGGGCCCAGAGCCTGCAGAGTGCCAGGGCTGC...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTAGCCTGCAGCCGGAGCTaGAGTGCTCCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELACSRS*SAPSSS
Trigger: GGAGGAGCTGGGAGCACTGCAGCTCCGGCTGCAGGC...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCACCATCCCTGGTCTCCTaGTCTAGAGCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAPSLVS*SRACSR
Trigger: CCGGCTGCAGGCTCTAGAGCAGGAGACCAGGGATGG...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACCGCTGGCCAGAGCGTaGCTTGGCAGCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELPLARA*LGSLVL
Trigger: GAGGACGAGGCTGCCAAGGCACGCTCTGGCCAGCGG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCACTGGCGGCGGCGGCTaGGGTAGTCGAGGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGTGGGG*GSRGCG
Trigger: ACCGCAACCTCGACTACCCCAGCCGCCGCCGCCAGT...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTATCTCGGGCGCCTTTCTaGCGCCGCAGTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELSRAPF*RRSASS
Trigger: GCTGGAGGCACTGCGGCGCCAGAAAGGCGCCCGAGA...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAAGCAGCTGTCGTCCCTaGAGATCAGAGGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRSSCRP*RSEASP
Trigger: TGGAGATGCCTCTGATCTTCAGGGACGACAGCTGCT...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGACTTCCAGGCTCTTCTTaGGGCGCTGGATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRLPGSS*GAGSLA
Trigger: AGCAAGAGATCCAGCGCCTCAAGAAGAGCCTGGAAG...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCATAAGCCCAGCCCGGTaGGCCTCCTCTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGISPAR*ASSGDS
Trigger: GCTGTCCCCAGAGGAGGCTCACCGGGCTGGGCTTAT...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAATGCGGCCCTTGGCTTaGTGGTCCAGCCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAMRPLA*WSSQYS
Trigger: GCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCAT...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGATCATGTGCTTGGCGATaGCCGAATCTGCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRSCAWR*PNLPPA
Trigger: TGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGA...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGACGCGAGATGAGGCCCTaGTCACTCTCAAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRREMRP*SLSKSQ
Trigger: CTGTGACTTTGAGAGTGACCAGGGCCTCATCTCGCG...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAGGCTGGCCAGTGAGCTaGAACACTGCTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAGWPVS*NTAWPP
Trigger: AGGTGGCCAAGCAGTGTTCCAGCTCACTGGCCAGCC...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCCGCTCTTCCTCCAGCTaGGCTCGGAGCAGGGCATGC +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGRSSSS*ARSRAC
Trigger: GCATGCCCTGCTCCGAGCCCAGCTGGAGGAAGAGCG...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGCCACAGGGATGGGCTTaGGCGGCGTCTCGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKPQGWA*AASRGG
Trigger: ACCGCCGCGAGACGCCGCTCAAGCCCATCCCTGTGG...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACTGGCCGGGAGGGCCTaGACAAAGGCTTCACACTCG +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELLAGRA*TKASHS
Trigger: CGAGTGTGAAGCCTTTGTGCAGGCCCTCCCGGCCAG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACGCTGGTGCTCCTCCTaGAGCCTCCGGTATTCTGCC +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELRWCSS*SLRYSA
Trigger: GGCAGAATACCGGAGGCTGCAGGAGGAGCACCAGCG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAAATCCAGCTCCCTCTTaGTCTGGCTCTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRNPAPS*SGSPLP
Trigger: TGGAAGAGGAGAGCCAGAGCAAGAGGGAGCTGGATT...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGACTGAGAGTTCCTTGTTaGAGATGCTCCGCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRLRVPC*RCSASA
Trigger: TGCAGACGCGGAGCATCTCCAACAAGGAACTCTCAG...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAAGTCGCTCTGCATCTTaGCCTCGGTGTCCACAATGT +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRSRSAS*PRCPQC
Trigger: ACATTGTGGACACCGAGGCCAAGATGCAGAGCGACT...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAATGTCCCCCTGTGGGTaGTTCATGTGCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAMSPCG*FMCLAM
Trigger: CATCGCCAAGCACATGAAGCACCCACAGGGGGACAT...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTGCAGCGAGCTCAGGTaGTGCTGCCGTGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGCSELR*CCRACD
Trigger: ATCACAGGCACGGCAGCAGCACCTGAGCTCGCTGCA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTTCAGCCAGCGTCTGCTaGAGCTGCTGGAAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASSASVC*SCWKLS
Trigger: GGAGAGCTTCCAGCAGCTGCAGCAGACGCTGGCTGA...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTCCTGCTCTAGAGCCTaGAGCCGGAGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGSCSRA*SRSCSA
Trigger: AGCACTGCAGCTCCGGCTGCAGGCTCTAGAGCAGGA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTCTCCTCCTGCTCCAATaGAGCCAGCCGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASLLLLQ*SQPLLQ
Trigger: CTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAG...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTGCATGCTCCCTGGTCTaGTGTGGGTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILAACSLV*CGSCCS
Trigger: GCTGCAGCAGGACCCACAGCAGACCAGGGAGCATGC...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCGCCGGTCCAGGTCACTaGCCACTTTGTCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGAGPGH*PLCPSQ
Trigger: CTGGCTTGGACAAAGTGGCCAGTGACCTGGACCGGC...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCCTCTGCCTTGGGATCTaGCCGCACGATCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGLCLGI*PHDLSD
Trigger: GTCCGAGAGATCGTGCGGCCAGATCCCAAGGCAGAG...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCATCCTCCCTGAGCCTCTaGAGTTCCTGCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEASSLSL*SSCSVS
Trigger: AGAGACAGAGCAGGAACTCCAGAGGCTCAGGGAGGA...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCACCTTCTCACCAGTCTTaGCCTCCTCCTGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAPSHQS*PPPAPM
Trigger: CATTGGAGCAGGAGGAGGCCAAGACTGGTGAGAAGG...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAGGGGCCCGATGGCTTTaGCTTCATTGTGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAGARWL*LHCGRC
Trigger: ACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCC...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGCCTCCTGCTTCTCCCTaGGTGTGCCCTCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKPPASP*VCPPAG
Trigger: ACCAGCGGGAGGGCACACTCAGGGAGAAGCAGGAGG...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAGTCGGCCTCTTTCACTaGCAGGCTGTACATCTGCTT +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAVGLFH*QAVHLL
Trigger: AAGCAGATGTACAGCCTGGCAGTGAAAGAGGCCGAC...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTCCAGCTTCTTCCCAGTaGTGTCTGTCAGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASPASSQ*CLSAPS
Trigger: GCTGGGAGCTGACAGACAGCACTGGGAAGAAGCTGG...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGCGTCTGCTGCAGCTaGTGGAAGCTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILASVCCS*WKLSSR
Trigger: CCTGGAGGAGAGCTTCCAGCAGCTGCAGCAGACGCT...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTAGCTCCTCCCGAAGCTaGAAGACCTCATCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASSSSRS*KTSSSW
Trigger: CCAGGAGGATGAGGTCTTGCAGCTTCGGGAGGAGCT...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACTCACACTTCGGTACTaGCTGCCCAGGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELLTLRY*LPRLSA
Trigger: TGCTGACAGCCTGGGCAGCCAGTACCGAAGTGTGAG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTATGTTCTCCAGGCGGTTaGCCACGTCCACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELCSPGG*PRPPSP
Trigger: AGGAGAAGGTGGACGTGGCCAACCGCCTGGAGAACA...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAAGGTTGTTGAAACGTTaGTTGAGCTTGTGCACCTCG +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRRLLKR*LSLCTS
Trigger: CGAGGTGCACAAGCTCAACCAACGTTTCAACAACCT...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAAAGACCTCATCCTCCTaGGCTCTGTCTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAKTSSS*ALSGSM
Trigger: CATTGAGCCAGACAGAGCCCAGGAGGATGAGGTCTT...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGAGTGTGCCCTCCCGCTaGTGCTCCTCCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKSVPSR*CSSCSL
Trigger: GAGGCTGCAGGAGGAGCACCAGCGGGAGGGCACACT...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAGAAGAGCGTCCTCAATaGAGAACTTCTTGCCTGACT +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELREERPQ*RTSCLT
Trigger: AGTCAGGCAAGAAGTTCTCCATTGAGGACGCTCTTC...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTGCGCAAGACCTCCTTaGCCACATACTCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILACARPP*PHTPVP
Trigger: GGGGACAGGAGTATGTGGTCAAGGAGGTCTTGCGCA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCCTGTGTCAGGGTCTATaGCCACTATGGAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGLCQGL*PLWSAS
Trigger: TGAGGCGCTCCATAGTGGTCATAGACCCTGACACAG...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTCGCTCCAGTCATACTaGATGCGGCCCTTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILASLQSY*MRPLAC
Trigger: GCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTCGCACTATCCTCAATTaGCCGTCCCTGCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASRTILN*PSLLKW
Trigger: CCACTTGAGCAGGGACGGGCAATTGAGGATAGTGCG...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACACTCGGCTGTGCACTaGGTCTTCTCTGGCTCAATC +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELHSAVH*VFSGSI
Trigger: GATTGAGCCAGAGAAGACGCAGTGCACAGCCGAGTG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCCCAGCTCCTGCCTCTTaGTGTCCAACACATGACCAC +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGPAPAS*CPTHDH
Trigger: GTGGTCATGTGTTGGACAGCAAGAGGCAGGAGCTGG...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCCGTTGGTTGAGCTTGTaGACCTCGGCCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPARWLSL*TSASCR
Trigger: GCGGCAGGAGGCCGAGGTGCACAAGCTCAACCAACG...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCATCCATGTTTCCTCCATaGCAGAGCTTAGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEASMFPP*QSLAFP
Trigger: GGGGAAAGCTAAGCTCTGGCATGGAGGAAACATGGA...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTAGGGTCTTCCTGGAACTaGAGGATCTCCTGGACTACC +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELGSSWN*RISWTT
Trigger: GGTAGTCCAGGAGATCCTGCAGTTCCAGGAAGACCC...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCGTCTTGGCCTCCTCCTaGTCCAATGCAGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAVLASS*SNAASR
Trigger: GCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAAGAC...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTGATCATGTCCCCCTGTaGGTGCTTCATGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASDHVPL*VLHVLG
Trigger: GCCAAGCACATGAAGCACCCACAGGGGGACATGATC...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGACGGCCCTTGGCTTGCTaGTCCAGCCAGTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGRPLAC*SSQYSS
Trigger: TGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCG...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCCCCAGGAGGGACTTGTaGGCCTGCAGCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAPRRDL*ACSSEA
Trigger: GGCTTCTGAGCTGCAGGCCCACAAGTCCCTCCTGGG...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGATATTCTGCCTCCAGTTaGGGGTCATTCTGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRYSASS*GSFCSF
Trigger: AAAGCTACAGAATGACCCCCAACTGGAGGCAGAATA...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCGTGTCCTTAAGGGCCTaGATCTCCTGCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGVSLRA*ISCFSW
Trigger: CCAGCTGAAGCAGGAGATCCAGGCCCTTAAGGACAC...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTGTTTGGGGGTCTTCCTaGAACTGCAGGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASVWGSS*NCRISW
Trigger: CCAGGAGATCCTGCAGTTCCAGGAAGACCCCCAAAC...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAACTCTACCTCCTTCTTaGTTTGGGGGTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEATLPPS*FGGLPG
Trigger: TCCAGGAAGACCCCCAAACCAAGAAGGAGGTAGAGT...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTGATCTTCTCTTCCTaGGATGCCCGCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGLIFSS*DARSPS
Trigger: GGAAGGGGAGCGGGCATCCCAGGAAGAGAAGATCAA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAACCACCTTTTGTGTGTaGGTCACCTTCTCACCAGTC +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEATTFCV*VTFSPV
Trigger: GACTGGTGAGAAGGTGACCCACACACAAAAGGTGGT...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCGAAGCGGCTGGCCAGTaGGCTGGAACACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIEAAGQ*AGTLLG
Trigger: GCCAAGCAGTGTTCCAGCTCACTGGCCAGCCGCTTC...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAATTAGGACCTTTCACTaGTATCTCCTCCCAGTCGCA +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAIRTFH*YLLPVA
Trigger: TGCGACTGGGAGGAGATATCAGTGAAAGGTCCTAAT...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTCCTTTCCACCTGGTCTaGATTCTTCTGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASPFHLV*ILLQLL
Trigger: GAGCAGCTGCAGAAGAATGCAGACCAGGTGGAAAGG...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTTGGAGTTCACTGTTCTaGTCCTTGTCCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASWSSLF*SLSLAR
Trigger: CCTGGCCAAGGACAAGGAGCAGAACAGTGAACTCCA...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCGAGCTCAGGTGCTGCTaGCGTGCCTGTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAELRCC*RACDAV
Trigger: GACAGCATCACAGGCACGGCAGCAGCACCTGAGCTC...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCAGCGAGCTCAGGTGCTaGTGCCGTGCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPASELRC*CRACDA
Trigger: AGCATCACAGGCACGGCAGCAGCACCTGAGCTCGCT...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTAAGTCTGAGTCCACCTTaGGTAGCAGCTCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELSLSPP*VAAPEH
Trigger: ATGCTCAGGAGCTGCTACGCAAGGTGGACTCAGACT...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGACACTTCGGTACTGGCTaGCCAGGCTGTCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGHFGTG*PGCQQE
Trigger: CTCTTGCTGACAGCCTGGGCAGCCAGTACCGAAGTG...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTGTCCTTAGCACCTCATaGCGCTGCTGGAGTGCATGT +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILAVLSTS*RCWSAC
Trigger: ACATGCACTCCAGCAGCGGCATGAGGTGCTAAGGAC...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTAGTGAGCTGGAACACTaGTTGGCCACCTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASSELEH*LATCRF
Trigger: GAACCTACAGGTGGCCAAGCAGTGTTCCAGCTCACT...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCTCCAGGTCAGGGCAGTaGTCTTGGAAGCGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIISRSGQ*SWKRLA
Trigger: GGCCAGCCGCTTCCAAGAGCACTGCCCTGACCTGGA...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCTTTCTGGCGCCGCAGTaGCTCCAGCTCCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIFLAPQ*LQLLPK
Trigger: CTTCGGGAGGAGCTGGAGGCACTGCGGCGCCAGAAA...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTGCTCGGAGCAGGGCATaGTCCCTGGTCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFARSRA*SLVCCG
Trigger: CCCACAGCAGACCAGGGAGCATGCCCTGCTCCGAGC...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGACTCCGGGTCTCTAGCTaGAGGTTTTGCCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGLRVSS*RFCRSS
Trigger: GCTAGAGCGGCAAAACCTGCAGCTAGAGACCCGGAG...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCCCGCGTCTGCACCGTTaGGCTGTATTTGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGPRLHR*AVFAFV
Trigger: AACAAAGGCAAATACAGCCCAACGGTGCAGACGCGG...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTCAGTCCCAAAGCTCTaGCTGCTCAGCTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILASVPKL*LLSLSS
Trigger: GCTGGACAAGCTGAGCAGCCAGAGCTTTGGGACTGA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAGCTTTGACTTCATTGTaGAAGATGTTGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRALTSL*KMLCCS
Trigger: GGAGCAACACAACATCTTCCACAATGAAGTCAAAGC...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCGCGGCGGTACTTGAGTaGCACCACTTGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIAAVLE*HHLLPS
Trigger: CGAGGGCAGCAAGTGGTGCCACTCAAGTACCGCCGC...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCTCAGGGCAGTGCTCTTaGAAGCGGCTGGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPASGQCS*KRLASE
Trigger: CTCACTGGCCAGCCGCTTCCAAGAGCACTGCCCTGA...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAAGCTTGGTCTCCATCTaGCCGAGGCTGTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGSLVSI*PRLSVS
Trigger: GGAGACAGACAGCCTCGGCCAGATGGAGACCAAGCT...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTTCCTTCACCGCTTGCTaGTACTGCTGGGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: SELANCCWCLSFWHILASSFTAC*YCWESA
Trigger: TGCAGATTCCCAGCAGTACCAGCAAGCGGTGAAGGA...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTCTAGTCTGCACCTGTaGCTTGGTGTCCTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGSSLHL*LGVLKG
Trigger: GCCCTTAAGGACACCAAGCCACAGGTGCAGACTAGA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCGCTCCTCAGCACCCCTaGATTTGCGCTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIAPQHP*ICAPAP
Trigger: TGGAGCAGGAGCGCAAATTCAGGGGTGCTGAGGAGC...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACATCAATGCTGTTTGTaGAGGCAGTCACCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELHQCCL*RQSPQL
Trigger: GAGCTGAGGTGACTGCCTTCACAAACAGCATTGATG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAGTCCAGTTCCTTGGATaGCTTGGAATTATAGAATTC +
Preference number: 4 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRVQFLG*LGIIEF
Trigger: GAATTCTATAATTCCAAGTCATCCAAGGAACTGGAC...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAGTTAGCCTGCCACTCTaGAGAGCGTCCTCAATGGAG +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGVSLPL*RASSME
Trigger: CTCCATTGAGGACGCTCTTCAGAGTGGCAGGCTAAC...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTGTGGGTGCTTCATGTaGTTGGCGATGGCCGAATCT +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILACGCFM*LAMAES
Trigger: AGATTCGGCCATCGCCAAGCACATGAAGCACCCACA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGGTGATAGCCTTTTCCTaGCGGTCCAGGTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKVIAFS*RSRSLA
Trigger: GGCCAGTGACCTGGACCGGCAGGAAAAGGCTATCAC...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTAGGCCAGCAGCTCCCTaGCCCGCTGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFRPAAP*PAADCS
Trigger: AGAACAGTCTGCAGCGGGGCAGGGAGCTGCTGGCCT...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCAGGGACTTGTGGGCCTaGAGCTCAGAAGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIRDLWA*SSEAMA
Trigger: GGCCATGGCTTCTGAGCTGCAGGCCCACAAGTCCCT...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAGCCCTCCGTTCCACCTaGTGGCTGAGGTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGALRST*WLRLLK
Trigger: TTTCAACAACCTCAGCCAGCAGGTGGAACGGAGGGC...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGATTGGCAGCAGGAGACTaGAGCCTGGCTCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGLAAGD*SLALLF
Trigger: GAACAAGAGAGCCAGGCTGCAGTCTCCTGCTGCCAA...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAACTCCTGCTTCTGGTTaGTGTCTCAAGAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEATPASG*CLKRFS
Trigger: ACTGAATCTCTTGAGACAGCAACCAGAAGCAGGAGT...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACTCATGGGTCACTCCTaGTTCTGGTTGCTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELLMGHS*FWLLSQ
Trigger: TTGAGACAGCAACCAGAAGCAGGAGTGACCCATGAG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCGCTCTTGGAAGCGGCTaGCCAGTGAGCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAALGSG*PVSWNT
Trigger: AGTGTTCCAGCTCACTGGCCAGCCGCTTCCAAGAGC...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCATCAAGCAAGTTCTTCTaGTTCTTGAGCTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEASSKFF*FLSLVS
Trigger: GGAGACCAAGCTCAAGAACCAGAAGAACTTGCTTGA...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGCTCCTGGGCTCTGTCTaGCTCAATGCGCAAGACCTC +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKLLGSV*LNAQDL
Trigger: GAGGTCTTGCGCATTGAGCCAGACAGAGCCCAGGAG...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTATCTTGCCTTCTGCCATaGCTCGTTCTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELSCLLP*LVLSPV
Trigger: GACTGGAGAAAGAACGAGCCATGGCAGAAGGCAAGA...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTGCAGGGCATGCTCCCTaGTCTGCTGTGGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFAGHAP*SAVGPA
Trigger: AGCAGGACCCACAGCAGACCAGGGAGCATGCCCTGC...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCCGGTGAGCCTCCTCTaGGGACAGCTCACGACCTGT +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFPVSLL*GQLTTC
Trigger: ACAGGTCGTGAGCTGTCCCCAGAGGAGGCTCACCGG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CAA 72 bp GAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTaGAAAGAGGCAGAAAGGTTATTAAGTCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: EGQQPQWTSLVE*KEAERLLSHQR
Trigger: CCTCTGATGACTTAATAACCTTTCTGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
3UTR CAA 72 bp ATCCTGGCTAGTTATTCTAGCACCAAGAGCCAGGCATaGTGGATTCTGGACACATGTTCTAGTGTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ILASYSSTKSQA*WILDTCSSVEP
Trigger: GGGCTCTACACTAGAACATGTGTCCAGAATCCACAATGCCTGGCTCTTGGTGCTAGAATAACTAGCCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCACAGTGTGCAGTTTGTTaGTTCTTTCTTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAQCAVC*FFLLWP
Trigger: AGGCCAAAGAAGAAAGAATCAACAAACTGCACACTG...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCGGCTCTCCTCACAGATaGGCAGGTTCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAGSPHR*AGSGTP
Trigger: AGGAGTACCTGAACCTGCTCATCTGTGAGGAGAGCC...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCTATAGCCCCGCGAGATaGGGCCCTGGTCACTCTCAA +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIYSPAR*GPGHSQ
Trigger: TTGAGAGTGACCAGGGCCTCATCTCGCGGGGCTATA...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTTCTTCTGGTTCTTaGGCTTGGTCTCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILASSSGS*AWSPSG
Trigger: GCCAGATGGAGACCAAGCTCAAGAACCAGAAGAACT...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACCTTGGACATCTTCTTaGGGTCATCCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELPWTSS*GHPVPS
Trigger: AGAAGGAACTGGATGACCTCAAGAAGATGTCCAAGG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCAAGACTGCCAGCTCCTaGATGGACATATCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGKTASS*MDISLL
Trigger: CAACAAGGATATGTCCATTCAGGAGCTGGCAGTCTT...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCAGTACAGCTCATTGGTaGAGCGCTGCATGTAATCCT +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGSTAHW*SAACNP
Trigger: AGGATTACATGCAGCGCTGCACCAATGAGCTGTACT...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCTGGGGTAGTCGAGGTTaGGGTCGCTCCAGTCATACT +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAWGSRG*GRSSHT
Trigger: AGTATGACTGGAGCGACCGCAACCTCGACTACCCCA...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCATGCCGCTGCTGGAGTaGATGTTTGCTCCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIMPLLE*MFAPSR
Trigger: GCGACTGGGAGCAAACATGCACTCCAGCAGCGGCAT...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCCTTCACACTCGGCTGTaGACTGCGTCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPALHTRL*TASSLA
Trigger: AGCCAGAGAAGACGCAGTGCACAGCCGAGTGTGAAG...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGGCTCCCAGCTCCTCCTaGAATAGCTGGTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKAPSSS*NSWFLC
Trigger: GCACAAGAACCAGCTATTGCAGGAGGAGCTGGGAGC...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCTGAATTTGCGCTCCTaGTCCACCAGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFLNLRS*STSSRR
Trigger: CCGCCTGGAGCTGGTGGAGCAGGAGCGCAAATTCAG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGTGCTGTGGGTCCTGCTaGAGCACCACCTTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKCCGSC*STTFCV
Trigger: CACACAAAAGGTGGTGCTGCAGCAGGACCCACAGCA...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCGGTGCTTCATGTGCTTaGCGATGGCCGAATCTGCCT +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAGASCA*RWPNLP
Trigger: AGGCAGATTCGGCCATCGCCAAGCACATGAAGCACC...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTGCCAGTACAGCTCATTaGTGCAGCGCTGCATGTAAT +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILAASTAH*CSAACN
Trigger: ATTACATGCAGCGCTGCACCAATGAGCTGTACTGGC...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGCCATGTGTGCCTCAATaGAGTTCCTCCCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKPCVPQ*SSSLGA
Trigger: AGCACCCAGGGAGGAACTCCATTGAGGCACACATGG...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCGCTCATATTTCTGGTTaGTGTCTTCTACCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGAHISG*CLLPGS
Trigger: AGACCCGGGTAGAAGACACCAACCAGAAATATGAGC...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGACTCCGTTCCACCTGCTaGCTGAGGTTGTTGAAACGT +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGLRSTC*LRLLKR
Trigger: ACGTTTCAACAACCTCAGCCAGCAGGTGGAACGGAG...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCCATAACTGGGAGTCTTaGCCAAAAACTGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGHNWES*PKTGAH
Trigger: GTGTGCTCCAGTTTTTGGCCAAGACTCCCAGTTATG...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGCCTCTTCCTTCACTTTaGCAGCAGGAGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKPLPSL*QQETAA
Trigger: GGCTGCAGTCTCCTGCTGCCAAAGTGAAGGAAGAGG...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCTCCAGGGCAGGGTCTaGCACCTTCTTCAGCACCTC +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFLQGRV*HLLQHL
Trigger: GAGGTGCTGAAGAAGGTGCCAGACCCTGCCCTGGAG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTATCCTCCTGCAATAGCTaGTTCTTGTGCTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELSSCNS*FLCCSS
Trigger: TGAGGAACAGCACAAGAACCAGCTATTGCAGGAGGA...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCCTGTCCCCCATCCCTaGTCTCCTGCTCTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFPVPHP*SPALEP
Trigger: AGGCTCTAGAGCAGGAGACCAGGGATGGGGGACAGG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGGCCTCGTCCTCATACTaGCGGGTGAGGTCATTGACT +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKASSSY*RVRSLT
Trigger: AGTCAATGACCTCACCCGCCAGTATGAGGACGAGGC...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTGCTCCAGGCGGAGGTTaGCCACTTCACTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFAPGGG*PLHSLP
Trigger: AGGCAGAGAGTGAAGTGGCCAACCTCCGCCTGGAGC...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCAGCTCCCTCTTGCTCTaGCTCTCCTCTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIISSLLL*LSSSRL
Trigger: GAGCCTGGAAGAGGAGAGCCAGAGCAAGAGGGAGCT...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTAGCATTCTTCTGCAGCTaGTCAATCAGATCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LYEGSGAEDTQEVAENELAFFCS*SIRSES
Trigger: ACTCTCAGATCTGATTGAGCAGCTGCAGAAGAATGC...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCCTTTTCCTGCACCCTaGTCTTCTCAGCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFPFPAP*SSQQPG
Trigger: CCCTGGCTGCTGAGAAGAGCAGGGTGCAGGAAAAGG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTCTTTTCTTTGATCTCTaGCTTCTCCAGGGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILALFFDL*LLQGSQ
Trigger: TTGGCTGCCCTGGAGAAGGCAGAGATCAAAGAAAAG...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTTTGTCCTTGGCCAGGTaGGGCCCGATGGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFLSLAR*GPMALT
Trigger: AGTCAAAGCCATCGGGCCCCACCTGGCCAAGGACAA...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTCAGGGCTATATTTCTaGTTCAAGTCTGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGSGLYF*FKSEST
Trigger: GGTGGACTCAGACTTGAACCAGAAATATAGCCCTGA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCACCTCATGCCGCTGCTaGAGTGCATGTTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIITSCRC*SACLLP
Trigger: TGGGAGCAAACATGCACTCCAGCAGCGGCATGAGGT...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCCTTCACTCTCTGCCTTaGGATCTGGCCGCACGATCT +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIILHSLP*DLAARS
Trigger: AGATCGTGCGGCCAGATCCCAAGGCAGAGAGTGAAG...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTATGGAGCGCCTCAGGTaGTTCTCCCTCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFMERLR*FSLCSL
Trigger: GAGAGAGCAGAGGGAGAACCACCTGAGGCGCTCCAT...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCTCCCAGTCGCACTCCTaGCTTCTGAGCTTCACAAAC +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPASQSHS*LLSFTN
Trigger: GTTTGTGAAGCTCAGAAGCCAGGAGTGCGACTGGGA...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGCGCACTCCTGGCTTCTaGGCTTCACAAACATTTTCC +
Preference number: 4 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKRTPGF*ASQTFS
Trigger: GGAAAATGTTTGTGAAGCTCAGAAGCCAGGAGTGCG...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCAGCCTCTGGAGTTCCTaGTCTGTCTCTGGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIISLWSS*SVSGSV
Trigger: AACTGACCCAGAGACAGAGCAGGAACTCCAGAGGCT...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCCCTTGTAGGGTCTCATaGGTCACTCCTGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIPCRVS*VTPASG
Trigger: ACCAGAAGCAGGAGTGACCCATGAGACCCTACAAGG...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCAACTGCAGGATCTCCTaGACTACCTCTCTAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPANCRIS*TTSLVC
Trigger: GCAGACTAGAGAGGTAGTCCAGGAGATCCTGCAGTT...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTCTAGCTGTAGCTTGTaGTTTTCTTCTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGSSCSL*FSSLRK
Trigger: CTTCCTGAGAGAAGAAAACCACAAGCTACAGCTAGA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTGGACATATCCTTGTTaGCATAGCGGTCATATTGAG +
Preference number: 4 (lower is better)
Translates to: FSELANCCWCLSFWHILAWTYPC*HSGHIE
Trigger: CTCAATATGACCGCTATGTCAACAAGGATATGTCCA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCCACGGTTGTAACCACTaGAGTATTCATCGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPAHGCNH*SIHRRQ
Trigger: CTGCCTACGATGAATACTGCAGTGGTTACAACCGTG...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCAATAGCTGGTTCTTGTaGTGTTCCTCAGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIINSWFL*CSSASV
Trigger: GACGCTGGCTGAGGAACAGCACAAGAACCAGCTATT...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCCTCTTCTTGAGGCGCTaGATCTCTTGCTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIILFLRR*ISCSVS
Trigger: TGACACTGAGCAAGAGATCCAGCGCCTCAAGAAGAG...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGATTTCTTCTGTTCTTCTaGCAGCTGTATACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGFLLFF*QLYTQR
Trigger: TCTCTGCGTATACAGCTGTCAGAAGAACAGAAGAAA...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCTTCCTCCTTGCGTTTaGTCTTCTCTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFLPPCV*SSLPGM
Trigger: CATCCCAGGAAGAGAAGATCAAACGCAAGGAGGAAG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR TCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCCCTGACTTCCTGTCATaGATTACTGATGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIPDFLS*ITDDSP
Trigger: TGGGGAGTCATCAGTAATTCATGACAGGAAGTCAGG...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR GCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGACAATGGAGAACTTCTTaGCTGACTTCCTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGQWRTS*LTSCHE
Trigger: TTCATGACAGGAAGTCAGGCAAGAAGTTCTCCATTG...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAGCAACTTCTGATACTTaGCTTGGAGTTCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGATSDT*LGVHCS
Trigger: AGAACAGTGAACTCCAAGCCAAGTATCAGAAGTTGC...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCGTCTGGATTTCCTCCTaGGCACTCTTGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIVWISS*ALLTSF
Trigger: AAATGAGGTCAAGAGTGCCCAGGAGGAAATCCAGAC...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAGGAAGTCCAGTTCCTTaGATGACTTGGAATTATAGA +
Preference number: 4 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGGSPVP*MTWNYR
Trigger: TCTATAATTCCAAGTCATCCAAGGAACTGGACTTCC...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCTCAGCTCGCAAATCTaGCTCATCTTCATACTGTAC +
Preference number: 4 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFLSSQI*LIFILY
Trigger: GTACAGTATGAAGATGAGCCAGATTTGCGAGCTGAG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CCA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCTTCCTGCTCTGTCTCTaGGTCAGTTGTATATTTAAT +
Preference number: 4 (lower is better)
Translates to: DTQEVAENELTISIFKIIFLLCL*VSCIFN
Trigger: ATTAAATATACAACTGACCCAGAGACAGAGCAGGAA...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp AGCTCACCCTCCAGTAGCTGCCTCCGGTGCCGCTCTTCCTCCAGCTaGGCTCGGAGCAGGGCATGCTCCCTGGTCTGCTGTGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSPSSSCLRCRSSSS*ARSRACSLVCCGSC
Trigger: GCAGGACCCACAGCAGACCAGGGAGCATGCCCTGCTCCGAGCCCAGCTGGAGGAAGAGCGGCACCGGAGGCAGCTACTGGAGGGTGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GAGTCAGACACGTTCTGCAGGGCCGCGTCCCGGTGCTCAGGGAGCTaGCCCTCTTGCATCCGGGCCAAGTCGCTCTGCATCTTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: ESDTFCRAASRCSGS*PSCIRAKSLCILAS
Trigger: CGAGGCCAAGATGCAGAGCGACTTGGCCCGGATGCAAGAGGGGCAGCTCCCTGAGCACCGGGACGCGGCCCTGCAGAACGTGTCTGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GCAGCCAACTTTCTACGCAGCGGCTCAAGCTCACCCTCCAGTAGCTaGCTCCGGTGCCGCTCTTCCTCCAGCTGGGCTCGGAGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: AANFLRSGSSSPSSS*LRCRSSSSWARSRA
Trigger: TGCCCTGCTCCGAGCCCAGCTGGAGGAAGAGCGGCACCGGAGGCAGCTACTGGAGGGTGAGCTTGAGCCGCTGCGTAGAAAGTTGGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GGCTTGAGCGGCGTCTCGCGGCGGTACTTGAGTGGCACCACTTGCTaGCCTCGCCTCTGCAGCCCTCGCACCACATCCTCATACTTGTCC +
Preference number: 5 (lower is better)
Translates to: GLSGVSRRYLSGTTC*PRLCSPRTTSSYLS
Trigger: GGACAAGTATGAGGATGTGGTGCGAGGGCTGCAGAGGCGAGGGCAGCAAGTGGTGCCACTCAAGTACCGCCGCGAGACGCCGCTCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TCACCAGTCTTGGCCTCCTCCTGCTCCAATGCAGCCAGCCGCTGTTaGAGCCTCTGTACCTCCAGCTCGGCTGCCCTACGTGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SPVLASSCSNAASRC*SLCTSSSAALRACL
Trigger: GAGGCAGGCACGTAGGGCAGCCGAGCTGGAGGTACAGAGGCTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAAGACTGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GGTTGGTGTCTTCTACCCGGGTCTTCAGCAAGGGTGCGGTGCCGCTaGCCGGGAGGGCCTGCACAAAGGCTTCACACTCGGCTGTGCACT +
Preference number: 5 (lower is better)
Translates to: GWCLLPGSSARVRCR*PGGPAQRLHTRLCT
Trigger: AGTGCACAGCCGAGTGTGAAGCCTTTGTGCAGGCCCTCCCGGCCAGCGGCACCGCACCCTTGCTGAAGACCCGGGTAGAAGACACCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GGCGGCTGGGGTAGTCGAGGTTGCGGTCGCTCCAGTCATACTGCATaGGGCCCTTGGCTTGCTGGTCCAGCCAGTACAGCTCATTGGTGC +
Preference number: 5 (lower is better)
Translates to: GGWGSRGCGRSSHTA*GPWLAGPASTAHWC
Trigger: GCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGACCGCAACCTCGACTACCCCAGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CGGCCTCCTGCCGCTCCAGGTCAGGGCAGTGCTCTTGGAAGCGGCTaGCCAGTGAGCTGGAACACTGCTTGGCCACCTGTAGGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RPPAAPGQGSALGSG*PVSWNTAWPPVGSV
Trigger: AACAGAACCTACAGGTGGCCAAGCAGTGTTCCAGCTCACTGGCCAGCCGCTTCCAAGAGCACTGCCCTGACCTGGAGCGGCAGGAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp CTTGGCGATGGCCGAATCTGCCTCCAGCACGTACAGCAGCTTTTCTaGGTCAGACACGTTCTGCAGGGCCGCGTCCCGGTGCTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LGDGRICLQHVQQLF*VRHVLQGRVPVLRE
Trigger: CTCCCTGAGCACCGGGACGCGGCCCTGCAGAACGTGTCTGACTCAGAAAAGCTGCTGTACGTGCTGGAGGCAGATTCGGCCATCGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TCTGCCTCCAGCACGTACAGCAGCTTTTCTGAGTCAGACACGTTCTaGAGGGCCGCGTCCCGGTGCTCAGGGAGCTGCCCCTCTTGCATC +
Preference number: 5 (lower is better)
Translates to: SASSTYSSFSESDTF*RAASRCSGSCPSCI
Trigger: GATGCAAGAGGGGCAGCTCCCTGAGCACCGGGACGCGGCCCTGCAGAACGTGTCTGACTCAGAAAAGCTGCTGTACGTGCTGGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GCATGCGGCCCTTGGCTTGCTGGTCCAGCCAGTACAGCTCATTGGTaGAGCGCTGCATGTAATCCTGCAGCGAGCTCAGGTGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ACGPWLAGPASTAHW*SAACNPAASSGAAA
Trigger: GGCAGCAGCACCTGAGCTCGCTGCAGGATTACATGCAGCGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GTCTCGCGGCGGTACTTGAGTGGCACCACTTGCTGCCCTCGCCTCTaGAGCCCTCGCACCACATCCTCATACTTGTCCAGAGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VSRRYLSGTTCCPRL*SPRTTSSYLSRAFS
Trigger: GGAGAAGGCTCTGGACAAGTATGAGGATGTGGTGCGAGGGCTGCAGAGGCGAGGGCAGCAAGTGGTGCCACTCAAGTACCGCCGCGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp ATTTCTGGTTGGTGTCTTCTACCCGGGTCTTCAGCAAGGGTGCGGTaGCGCTGGCCGGGAGGGCCTGCACAAAGGCTTCACACTCGGCTG +
Preference number: 5 (lower is better)
Translates to: ISGWCLLPGSSARVR*RWPGGPAQRLHTRL
Trigger: CAGCCGAGTGTGAAGCCTTTGTGCAGGCCCTCCCGGCCAGCGGCACCGCACCCTTGCTGAAGACCCGGGTAGAAGACACCAACCAGAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TGTCGTCCTGAATCAGCCTGTTCTCGTATGAGGCCAGCAGCTCCCTaGCCCGCTGCAGACTGTTCTCCAGGCGGTTGGCCACGTCCACCT +
Preference number: 5 (lower is better)
Translates to: CRPESACSRMRPAAP*PAADCSPGGWPRPP
Trigger: AGGTGGACGTGGCCAACCGCCTGGAGAACAGTCTGCAGCGGGGCAGGGAGCTGCTGGCCTCATACGAGAACAGGCTGATTCAGGACGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp AAGACCTCCTTGACCACATACTCCTGTCCCCCATCCCTGGTCTCCTaGTCTAGAGCCTGCAGCCGGAGCTGCAGTGCTCCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KTSLTTYSCPPSLVS*SRACSRSCSAPSSS
Trigger: GGAGGAGCTGGGAGCACTGCAGCTCCGGCTGCAGGCTCTAGAGCAGGAGACCAGGGATGGGGGACAGGAGTATGTGGTCAAGGAGGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TGTGTGGGTCACCTTCTCACCAGTCTTGGCCTCCTCCTGCTCCAATaGAGCCAGCCGCTGTTGCAGCCTCTGTACCTCCAGCTCGGCTGC +
Preference number: 5 (lower is better)
Translates to: CVGHLLTSLGLLLLQ*SQPLLQPLYLQLGC
Trigger: GCAGCCGAGCTGGAGGTACAGAGGCTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAAGACTGGTGAGAAGGTGACCCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp AGCTGGGCTCGGAGCAGGGCATGCTCCCTGGTCTGCTGTGGGTCCTaGTGCAGCACCACCTTTTGTGTGTGGGTCACCTTCTCACCAGTC +
Preference number: 5 (lower is better)
Translates to: SWARSRACSLVCCGS*CSTTFCVWVTFSPV
Trigger: GACTGGTGAGAAGGTGACCCACACACAAAAGGTGGTGCTGCAGCAGGACCCACAGCAGACCAGGGAGCATGCCCTGCTCCGAGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GCGCTCTTTCAGCTGGCGGATGTCCTCGGCGATCATGTCCCCCTGTaGGTGCTTCATGTGCTTGGCGATGGCCGAATCTGCCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: ALFQLADVLGDHVPL*VLHVLGDGRICLQH
Trigger: GTGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGGACATCCGCCAGCTGAAAGAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GCTCCACCAGCTCCAGGCGGAGGTTGGCCACTTCACTCTCTGCCTTaGGATCTGGCCGCACGATCTCTCGGACCTTCTCCTGTACCACCA +
Preference number: 5 (lower is better)
Translates to: APPAPGGGWPLHSLP*DLAARSLGPSPVPP
Trigger: TGGTGGTACAGGAGAAGGTCCGAGAGATCGTGCGGCCAGATCCCAAGGCAGAGAGTGAAGTGGCCAACCTCCGCCTGGAGCTGGTGGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp ACCTCATGCCGCTGCTGGAGTGCATGTTTGCTCCCAGTCGCCTTCTaGCTCACACTTCGGTACTGGCTGCCCAGGCTGTCAGCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: TSCRCWSACLLPVAF*LTLRYWLPRLSARA
Trigger: GGCTCTTGCTGACAGCCTGGGCAGCCAGTACCGAAGTGTGAGGCAGAAGGCGACTGGGAGCAAACATGCACTCCAGCAGCGGCATGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CCCTGCTCAAGTGGTGGCCGTAGGATCCCTGTGATAGCCTTTTCCTaGCGGTCCAGGTCACTGGCCACTTTGTCCAAGCCAGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PCSSGGRRIPVIAFS*RSRSLATLSKPASS
Trigger: GCTGCTGGCTGGCTTGGACAAAGTGGCCAGTGACCTGGACCGGCAGGAAAAGGCTATCACAGGGATCCTACGGCCACCACTTGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TCAGGGCAGTGCTCTTGGAAGCGGCTGGCCAGTGAGCTGGAACACTaGTTGGCCACCTGTAGGTTCTGTTCCACCTCACCCAGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SGQCSWKRLASELEH*LATCRFCSTSPRRD
Trigger: GTCCCTCCTGGGTGAGGTGGAACAGAACCTACAGGTGGCCAAGCAGTGTTCCAGCTCACTGGCCAGCCGCTTCCAAGAGCACTGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CTGAGGTTGTTGAAACGTTGGTTGAGCTTGTGCACCTCGGCCTCCTaGCGCTCCAGGTCAGGGCAGTGCTCTTGGAAGCGGCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LRLLKRWLSLCTSAS*RSRSGQCSWKRLAS
Trigger: ACTGGCCAGCCGCTTCCAAGAGCACTGCCCTGACCTGGAGCGGCAGGAGGCCGAGGTGCACAAGCTCAACCAACGTTTCAACAACCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CGTTCCACCTGCTGGCTGAGGTTGTTGAAACGTTGGTTGAGCTTGTaGACCTCGGCCTCCTGCCGCTCCAGGTCAGGGCAGTGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: RSTCWLRLLKRWLSL*TSASCRSRSGQCSW
Trigger: CCAAGAGCACTGCCCTGACCTGGAGCGGCAGGAGGCCGAGGTGCACAAGCTCAACCAACGTTTCAACAACCTCAGCCAGCAGGTGGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TGGGCTCGGAGCAGGGCATGCTCCCTGGTCTGCTGTGGGTCCTGCTaGAGCACCACCTTTTGTGTGTGGGTCACCTTCTCACCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: WARSRACSLVCCGSC*STTFCVWVTFSPVL
Trigger: CAAGACTGGTGAGAAGGTGACCCACACACAAAAGGTGGTGCTGCAGCAGGACCCACAGCAGACCAGGGAGCATGCCCTGCTCCGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GGTAGTCGAGGTTGCGGTCGCTCCAGTCATACTGCATGCGGCCCTTaGCTTGCTGGTCCAGCCAGTACAGCTCATTGGTGCAGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: GSRGCGRSSHTACGP*LAGPASTAHWCSAA
Trigger: TGCAGCGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGACCGCAACCTCGACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CAGCTCCAGGCGGAGGTTGGCCACTTCACTCTCTGCCTTGGGATCTaGCCGCACGATCTCTCGGACCTTCTCCTGTACCACCACCTTAGC +
Preference number: 5 (lower is better)
Translates to: QLQAEVGHFTLCLGI*PHDLSDLLLYHHLS
Trigger: GCTAAGGTGGTGGTACAGGAGAAGGTCCGAGAGATCGTGCGGCCAGATCCCAAGGCAGAGAGTGAAGTGGCCAACCTCCGCCTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TGGCGGATGTCCTCGGCGATCATGTCCCCCTGTGGGTGCTTCATGTaGTTGGCGATGGCCGAATCTGCCTCCAGCACGTACAGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: WRMSSAIMSPCGCFM*LAMAESASSTYSSF
Trigger: AAAGCTGCTGTACGTGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGGACATCCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TCTTTCAGCTGGCGGATGTCCTCGGCGATCATGTCCCCCTGTGGGTaGTTCATGTGCTTGGCGATGGCCGAATCTGCCTCCAGCACGTAC +
Preference number: 5 (lower is better)
Translates to: SFSWRMSSAIMSPCG*FMCLAMAESASSTY
Trigger: GTACGTGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGGACATCCGCCAGCTGAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CTCATATTTCTGGTTGGTGTCTTCTACCCGGGTCTTCAGCAAGGGTaGGGTGCCGCTGGCCGGGAGGGCCTGCACAAAGGCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: LIFLVGVFYPGLQQG*GAAGREGLHKGFTL
Trigger: GAGTGTGAAGCCTTTGTGCAGGCCCTCCCGGCCAGCGGCACCGCACCCTTGCTGAAGACCCGGGTAGAAGACACCAACCAGAAATATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TTTTCCTGCACCCTGCTCTTCTCAGCAGCCAGGGCTGCTACACGCTaGTGTAAGAGTAGCACTTCAGCCTCTCGGGCGCCTTTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: FSCTLLFSAARAATR*CKSSTSASRAPFWR
Trigger: GCGCCAGAAAGGCGCCCGAGAGGCTGAAGTGCTACTCTTACAGCAGCGTGTAGCAGCCCTGGCTGCTGAGAAGAGCAGGGTGCAGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp ACTGCATGCGGCCCTTGGCTTGCTGGTCCAGCCAGTACAGCTCATTaGTGCAGCGCTGCATGTAATCCTGCAGCGAGCTCAGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: TACGPWLAGPASTAH*CSAACNPAASSGAA
Trigger: AGCAGCACCTGAGCTCGCTGCAGGATTACATGCAGCGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GGCAGTGCTCTTGGAAGCGGCTGGCCAGTGAGCTGGAACACTGCTTaGCCACCTGTAGGTTCTGTTCCACCTCACCCAGGAGGGACTTGT +
Preference number: 5 (lower is better)
Translates to: GSALGSGWPVSWNTA*PPVGSVPPHPGGTC
Trigger: ACAAGTCCCTCCTGGGTGAGGTGGAACAGAACCTACAGGTGGCCAAGCAGTGTTCCAGCTCACTGGCCAGCCGCTTCCAAGAGCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CAGCTCCTCCCGAAGCTGCAAGACCTCATCCTCCTGGGCTCTGTCTaGCTCAATGCGCAAGACCTCCTTGACCACATACTCCTGTCCCCC +
Preference number: 5 (lower is better)
Translates to: QLLPKLQDLILLGSV*LNAQDLLDHILLSP
Trigger: GGGGGACAGGAGTATGTGGTCAAGGAGGTCTTGCGCATTGAGCCAGACAGAGCCCAGGAGGATGAGGTCTTGCAGCTTCGGGAGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GCTGCAGCACCACCTTTTGTGTGTGGGTCACCTTCTCACCAGTCTTaGCCTCCTCCTGCTCCAATGCAGCCAGCCGCTGTTGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: AAAPPFVCGSPSHQS*PPPAPMQPAAVAAS
Trigger: AGAGGCTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAAGACTGGTGAGAAGGTGACCCACACACAAAAGGTGGTGCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TCACGACCTGTGTCAGGGTCTATGACCACTATGGAGCGCCTCAGGTaGTTCTCCCTCTGCTCTCTCTTGACAGCCACAGAGCCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: SRPVSGSMTTMERLR*FSLCSLLTATEPRR
Trigger: GCGCCTGGGCTCTGTGGCTGTCAAGAGAGAGCAGAGGGAGAACCACCTGAGGCGCTCCATAGTGGTCATAGACCCTGACACAGGTCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp ACCACTTTCAGGCATTGTGTCGTCCTGAATCAGCCTGTTCTCGTATaGGGCCAGCAGCTCCCTGCCCCGCTGCAGACTGTTCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: TTFRHCVVLNQPVLV*GQQLPAPLQTVLQA
Trigger: CGCCTGGAGAACAGTCTGCAGCGGGGCAGGGAGCTGCTGGCCTCATACGAGAACAGGCTGATTCAGGACGACACAATGCCTGAAAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp CAGGGCAGGGTCTGGCACCTTCTTCAGCACCTCCTTCCTCACCAATaGCTCCTGAGGCCCCTGATCCTTCAGGGTCTGGATTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: QGRVWHLLQHLLPHQ*LLRPLILQGLDFLL
Trigger: CAGGAGGAAATCCAGACCCTGAAGGATCAGGGGCCTCAGGAGTCATTGGTGAGGAAGGAGGTGCTGAAGAAGGTGCCAGACCCTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CAGTTGACTCTCGGGTCGGCCTCTTTCACTGCCAGGCTGTACATCTaGTTGTGTTTCCCCCGCAGGTTGGTCACGCGCTCTTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QLTLGSASFTARLYI*LCFPRRLVTRSFSW
Trigger: CCAGCTGAAAGAGCGCGTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGGCAGTGAAAGAGGCCGACCCGAGAGTCAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GTCCACCAGTGTGTCCCAGTTGACTCTCGGGTCGGCCTCTTTCACTaGCAGGCTGTACATCTGCTTGTGTTTCCCCCGCAGGTTGGTCAC +
Preference number: 5 (lower is better)
Translates to: VHQCVPVDSRVGLFH*QAVHLLVFPPQVGH
Trigger: GTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGGCAGTGAAAGAGGCCGACCCGAGAGTCAACTGGGACACACTGGTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TTGAGACCCTTGGCCCGCTCCGCACTATCCTCAATTGCCCGTCCCTaGTCAAGTGGTGGCCGTAGGATCCCTGTGATAGCCTTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LRPLARSALSSIARP*SSGGRRIPVIAFSC
Trigger: GCAGGAAAAGGCTATCACAGGGATCCTACGGCCACCACTTGAGCAGGGACGGGCAATTGAGGATAGTGCGGAGCGGGCCAAGGGTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp ACCTTTTGTGTGTGGGTCACCTTCTCACCAGTCTTGGCCTCCTCCTaGTCCAATGCAGCCAGCCGCTGTTGCAGCCTCTGTACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TFCVWVTFSPVLASS*SNAASRCCSLCTSS
Trigger: GCTGGAGGTACAGAGGCTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAAGACTGGTGAGAAGGTGACCCACACACAAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CAGGGAGCTGCCCCTCTTGCATCCGGGCCAAGTCGCTCTGCATCTTaGCCTCGGTGTCCACAATGTTCCTTTCCACCTGGTCTGCATTCT +
Preference number: 5 (lower is better)
Translates to: QGAAPLASGPSRSAS*PRCPQCSFPPGLHS
Trigger: AGAATGCAGACCAGGTGGAAAGGAACATTGTGGACACCGAGGCCAAGATGCAGAGCGACTTGGCCCGGATGCAAGAGGGGCAGCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CCTCGGCGATCATGTCCCCCTGTGGGTGCTTCATGTGCTTGGCGATaGCCGAATCTGCCTCCAGCACGTACAGCAGCTTTTCTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: PRRSCPPVGASCAWR*PNLPPARTAAFLSQ
Trigger: CTGACTCAGAAAAGCTGCTGTACGTGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GGATGTCCTCGGCGATCATGTCCCCCTGTGGGTGCTTCATGTGCTTaGCGATGGCCGAATCTGCCTCCAGCACGTACAGCAGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: GCPRRSCPPVGASCA*RWPNLPPARTAAFL
Trigger: CAGAAAAGCTGCTGTACGTGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGGACATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TGCTCCACCTGGCTATCCACCAGAGGAAGGTCAGTCCCAAAGCTCTaGCTGCTCAGCTTGTCCAGCTTCTCGTCCACCAGTGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: CSTWLSTRGRSVPKL*LLSLSSFSSTSVSQ
Trigger: CTGGGACACACTGGTGGACGAGAAGCTGGACAAGCTGAGCAGCCAGAGCTTTGGGACTGACCTTCCTCTGGTGGATAGCCAGGTGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CTTTCACTGCCAGGCTGTACATCTGCTTGTGTTTCCCCCGCAGGTTaGTCACGCGCTCTTTCAGCTGGCGGATGTCCTCGGCGATCATGT +
Preference number: 5 (lower is better)
Translates to: LSLPGCTSACVSPAG*SRALSAGGCPRRSC
Trigger: ACATGATCGCCGAGGACATCCGCCAGCTGAAAGAGCGCGTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGGCAGTGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CTGGCCGGGAGGGCCTGCACAAAGGCTTCACACTCGGCTGTGCACTaGGTCTTCTCTGGCTCAATCTGTAGCAGCTCATTGGTAATGTTC +
Preference number: 5 (lower is better)
Translates to: LAGRACTKASHSAVH*VFSGSICSSSLVMF
Trigger: GAACATTACCAATGAGCTGCTACAGATTGAGCCAGAGAAGACGCAGTGCACAGCCGAGTGTGAAGCCTTTGTGCAGGCCCTCCCGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CCATATCTTTCTGAGAAGTTCTGTCTTCTCCCGCTGGCCAGAGCGTaGCTTGGCAGCCTCGTCCTCATACTGGCGGGTGAGGTCATTGAC +
Preference number: 5 (lower is better)
Translates to: PYLSEKFCLLPLARA*LGSLVLILAGEVID
Trigger: GTCAATGACCTCACCCGCCAGTATGAGGACGAGGCTGCCAAGGCACGCTCTGGCCAGCGGGAGAAGACAGAACTTCTCAGAAAGATATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CGCTGCAGACTGTTCTCCAGGCGGTTGGCCACGTCCACCTTCTCCTaGGCTGCCTCTAGCAACCATACTAGTCGCTCATATTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RCRLFSRRLATSTFS*AASSNHTSRSYFWL
Trigger: CAACCAGAAATATGAGCGACTAGTATGGTTGCTAGAGGCAGCCCAGGAGAAGGTGGACGTGGCCAACCGCCTGGAGAACAGTCTGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TGGTCTCCATCTGGCCGAGGCTGTCTGTCTCCTGGGGCTCATAACTaGGAGTCTTGGCCAAAAACTGGAGCACACGGTTGTAACCACTGC +
Preference number: 5 (lower is better)
Translates to: WSPSGRGCLSPGAHN*ESWPKTGAHGCNHC
Trigger: GCAGTGGTTACAACCGTGTGCTCCAGTTTTTGGCCAAGACTCCCAGTTATGAGCCCCAGGAGACAGACAGCCTCGGCCAGATGGAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp CCTGTTCCCTGCTTGCTAGCTCATCAAGCAAGTTCTTCTGGTTCTTaGGCTTGGTCTCCATCTGGCCGAGGCTGTCTGTCTCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PVPCLLAHQASSSGS*AWSPSGRGCLSPGA
Trigger: AGCCCCAGGAGACAGACAGCCTCGGCCAGATGGAGACCAAGCTCAAGAACCAGAAGAACTTGCTTGATGAGCTAGCAAGCAGGGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp CTTCTGAGCTTCACAAACATTTTCCAGTCGATAAGCCCAGCCCGGTaGGCCTCCTCTGGGGACAGCTCACGACCTGTGTCAGGGTCTATG +
Preference number: 5 (lower is better)
Translates to: LLSFTNIFQSISPAR*ASSGDSSRPVSGSM
Trigger: CATAGACCCTGACACAGGTCGTGAGCTGTCCCCAGAGGAGGCTCACCGGGCTGGGCTTATCGACTGGAAAATGTTTGTGAAGCTCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GCATGCACAGCCTCCATGTGTGCCTCAATGGAGTTCCTCCCTGGGTaGTCAGCTGTCAGCAGTTGGTCACCTTCAGTGTGCAGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: ACTASMCASMEFLPG*SAVSSWSPSVCSLL
Trigger: CAACAAACTGCACACTGAAGGTGACCAACTGCTGACAGCTGAGCACCCAGGGAGGAACTCCATTGAGGCACACATGGAGGCTGTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GCAGCAAGAGCAGCTTCCTCTTCCTTCACTTTGGCAGCAGGAGACTaGAGCCTGGCTCTCTTGTTCACATGGCTGTTCCGTCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: AARAASSSFTLAAGD*SLALLFTWLFRPFS
Trigger: GGAGAATGGACGGAACAGCCATGTGAACAAGAGAGCCAGGCTGCAGTCTCCTGCTGCCAAAGTGAAGGAAGAGGAAGCTGCTCTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CGCAGAGACTCTACCTCCTTCTTGGTTTGGGGGTCTTCCTGGAACTaGAGGATCTCCTGGACTACCTCTCTAGTCTGCACCTGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: RRDSTSFLVWGSSWN*RISWTTSLVCTCGL
Trigger: CAAGCCACAGGTGCAGACTAGAGAGGTAGTCCAGGAGATCCTGCAGTTCCAGGAAGACCCCCAAACCAAGAAGGAGGTAGAGTCTCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TTCTCCTGGGCTGCCTCTAGCAACCATACTAGTCGCTCATATTTCTaGTTGGTGTCTTCTACCCGGGTCTTCAGCAAGGGTGCGGTGCCG +
Preference number: 5 (lower is better)
Translates to: FSWAASSNHTSRSYF*LVSSTRVFSKGAVP
Trigger: CGGCACCGCACCCTTGCTGAAGACCCGGGTAGAAGACACCAACCAGAAATATGAGCGACTAGTATGGTTGCTAGAGGCAGCCCAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CTGGAACTGCAGGATCTCCTGGACTACCTCTCTAGTCTGCACCTGTaGCTTGGTGTCCTTAAGGGCCTGGATCTCCTGCTTCAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: LELQDLLDYLSSLHL*LGVLKGLDLLLQLV
Trigger: TACCAGCTGAAGCAGGAGATCCAGGCCCTTAAGGACACCAAGCCACAGGTGCAGACTAGAGAGGTAGTCCAGGAGATCCTGCAGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CACAAACATTTTCCAGTCGATAAGCCCAGCCCGGTGAGCCTCCTCTaGGGACAGCTCACGACCTGTGTCAGGGTCTATGACCACTATGGA +
Preference number: 5 (lower is better)
Translates to: HKHFPVDKPSPVSLL*GQLTTCVRVYDHYG
Trigger: TCCATAGTGGTCATAGACCCTGACACAGGTCGTGAGCTGTCCCCAGAGGAGGCTCACCGGGCTGGGCTTATCGACTGGAAAATGTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGATTCTGGTTCTTGAGCTaGGTCTCCATCTGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRFWFLS*VSIWPR
Trigger: CCTCGGCCAGATGGAGACCAAGCTCAAGAACCAGAA...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGATGCAGCCTGGCTCTCTaGTTCACATGGCTGTTCCGT +
Preference number: 5 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRCSLAL*FTWLFR
Trigger: ACGGAACAGCCATGTGAACAAGAGAGCCAGGCTGCA...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp CACTGTTCTGCTCCTTGTCCTTGGCCAGGTGGGGCCCGATGGCTTTaGCTTCATTGTGGAAGATGTTGTGTTGCTCCACCTGGCTATCCA +
Preference number: 5 (lower is better)
Translates to: HCSAPCPWPGGARWL*LHCGRCCVAPPGYP
Trigger: TGGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCTGGCCAAGGACAAGGAGCAGAACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp AGGTGGGGCCCGATGGCTTTGACTTCATTGTGGAAGATGTTGTGTTaGTCCACCTGGCTATCCACCAGAGGAAGGTCAGTCCCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: RWGPMALTSLWKMLC*STWLSTRGRSVPKL
Trigger: GAGCTTTGGGACTGACCTTCCTCTGGTGGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CTCTCCAGCTCTGCTCGGCGATGCTGTAACCGCCGTAGCTCCACATaGAGTTTATCAATCTGCCGCAGCTCAGCATCAATGCTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: LSSSARRCCNRRSST*SLSICRSSASMLFV
Trigger: CACAAACAGCATTGATGCTGAGCTGCGGCAGATTGATAAACTGCATGTGGAGCTACGGCGGTTACAGCATCGCCGAGCAGAGCTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TGCACCTCCTGTTCCCTGCTTGCTAGCTCATCAAGCAAGTTCTTCTaGTTCTTGAGCTTGGTCTCCATCTGGCCGAGGCTGTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: CTSCSLLASSSSKFF*FLSLVSIWPRLSVS
Trigger: GGAGACAGACAGCCTCGGCCAGATGGAGACCAAGCTCAAGAACCAGAAGAACTTGCTTGATGAGCTAGCAAGCAGGGAACAGGAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TTCACTTTGGCAGCAGGAGACTGCAGCCTGGCTCTCTTGTTCACATaGCTGTTCCGTCCATTCTCCAGGTCCAGCAAGGACCTTAGCTTC +
Preference number: 5 (lower is better)
Translates to: FTLAAGDCSLALLFT*LFRPFSRSSKDLSF
Trigger: GAAGCTAAGGTCCTTGCTGGACCTGGAGAATGGACGGAACAGCCATGTGAACAAGAGAGCCAGGCTGCAGTCTCCTGCTGCCAAAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAAGATCTGAGAGTTCCTaGTTGGAGATGCTCCGCGTC +
Preference number: 5 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRRSESS*LEMLRV
Trigger: GACGCGGAGCATCTCCAACAAGGAACTCTCAGATCT...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGGGAGCTGCCCCTCTaGCATCCGGGCCAAGTCGCT +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILARELPL*HPGQVA
Trigger: AGCGACTTGGCCCGGATGCAAGAGGGGCAGCTCCCT...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTATTCTGCTCCTTGTCCTaGGCCAGGTGGGGCCCGATG +
Preference number: 5 (lower is better)
Translates to: LYEGSGAEDTQEVAENELFCSLS*ARWGPM
Trigger: CATCGGGCCCCACCTGGCCAAGGACAAGGAGCAGAA...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAACCACATCCTCATACTaGTCCAGAGCCTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRTTSSY*SRAFSW
Trigger: CCAGGAGAAGGCTCTGGACAAGTATGAGGATGTGGT...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCACCGCACTATCCTCAATaGCCCGTCCCTGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAPHYPQ*PVPAQV
Trigger: CACTTGAGCAGGGACGGGCAATTGAGGATAGTGCGG...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTCTGTTCTCCAGGCGGTaGGCCACGTCCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SELANCCWCLSFWHILASLFSRR*ATSTFS
Trigger: GGAGAAGGTGGACGTGGCCAACCGCCTGGAGAACAG...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGACCTCCTGTTCCCTGCTaGCTAGCTCATCAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRPPVPC*LAHQAS
Trigger: ACTTGCTTGATGAGCTAGCAAGCAGGGAACAGGAGG...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTATGGCCAGAGCGTGCCTaGGCAGCCTCGTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: LYEGSGAEDTQEVAENELWPERA*AASSSY
Trigger: GTATGAGGACGAGGCTGCCAAGGCACGCTCTGGCCA...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTAGCTCCAGGCGGAGGTaGGCCACTTCACTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SELANCCWCLSFWHILASSSRRR*ATSLSA
Trigger: GGCAGAGAGTGAAGTGGCCAACCTCCGCCTGGAGCT...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp CTCTGGCTCTCCTCTTCCAGGCTCTTCTTGAGGCGCTGGATCTCTTaGTCAGTGTCACCTTTTTCTACCTGGACACTCTCAGAGAAGACC +
Preference number: 5 (lower is better)
Translates to: LWLSSSRLFLRRWIS*SVSPFSTWTLSEKT
Trigger: GGTCTTCTCTGAGAGTGTCCAGGTAGAAAAAGGTGACACTGAGCAAGAGATCCAGCGCCTCAAGAAGAGCCTGGAAGAGGAGAGCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CCGATGGCTTTGACTTCATTGTGGAAGATGTTGTGTTGCTCCACCTaGCTATCCACCAGAGGAAGGTCAGTCCCAAAGCTCTGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PMALTSLWKMLCCST*LSTRGRSVPKLWLL
Trigger: GAGCAGCCAGAGCTTTGGGACTGACCTTCCTCTGGTGGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TCTGGCCGAGGCTGTCTGTCTCCTGGGGCTCATAACTGGGAGTCTTaGCCAAAAACTGGAGCACACGGTTGTAACCACTGCAGTATTCAT +
Preference number: 5 (lower is better)
Translates to: SGRGCLSPGAHNWES*PKTGAHGCNHCSIH
Trigger: ATGAATACTGCAGTGGTTACAACCGTGTGCTCCAGTTTTTGGCCAAGACTCCCAGTTATGAGCCCCAGGAGACAGACAGCCTCGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp ACCTCAGCTCGCAAATCTGGCTCATCTTCATACTGTACTACCTCCTaGCGTACAACCCTTTCCTTCCCCTGTGCCAGCTCTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TSARKSGSSSYCTTS*RTTLSFPCASSSSL
Trigger: CAAGGAGGAAGAGCTGGCACAGGGGAAGGAAAGGGTTGTACGCCAGGAGGTAGTACAGTATGAAGATGAGCCAGATTTGCGAGCTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACTCTGGCTGCTCAGCTaGTCCAGCTTCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: LYEGSGAEDTQEVAENELLWLLS*SSFSST
Trigger: GGTGGACGAGAAGCTGGACAAGCTGAGCAGCCAGAG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCACTGCAGCACCACCTTTaGTGTGTGGGTCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: KKEGQQPQWTSLVELKEALQHHL*CVGHLL
Trigger: GAGAAGGTGACCCACACACAAAAGGTGGTGCTGCAG...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCATCTTCCAGGCTCTTCTaGAGGCGCTGGATCTCTTGC +
Preference number: 5 (lower is better)
Translates to: KKEGQQPQWTSLVELKEASSRLF*RRWISC
Trigger: GCAAGAGATCCAGCGCCTCAAGAAGAGCCTGGAAGA...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp GCCCAGACACCAAGACTGCCAGCTCCTGAATGGACATATCCTTGTTaGCATAGCGGTCATATTGAGCAGCGGTTAGCCTGCCACTCTGAA +
Preference number: 5 (lower is better)
Translates to: AQTPRLPAPEWTYPC*HSGHIEQRLACHSE
Trigger: TTCAGAGTGGCAGGCTAACCGCTGCTCAATATGACCGCTATGTCAACAAGGATATGTCCATTCAGGAGCTGGCAGTCTTGGTGTCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TTCCTCCCTGGGTGCTCAGCTGTCAGCAGTTGGTCACCTTCAGTGTaGAGTTTGTTGATTCTTTCTTCTTTGGCCTCCAGGTTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: FLPGCSAVSSWSPSV*SLLILSSLASRFRL
Trigger: CAACCGGAACCTGGAGGCCAAAGAAGAAAGAATCAACAAACTGCACACTGAAGGTGACCAACTGCTGACAGCTGAGCACCCAGGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp TTCTACCTGGACACTCTCAGAGAAGACCACCTTTTCTTTGATCTCTaGCTTCTCCAGGGCAGCCAACTTTCTACGCAGCGGCTCAAGCTC +
Preference number: 5 (lower is better)
Translates to: FYLDTLREDHLFFDL*LLQGSQLSTQRLKL
Trigger: GAGCTTGAGCCGCTGCGTAGAAAGTTGGCTGCCCTGGAGAAGGCAGAGATCAAAGAAAAGGTGGTCTTCTCTGAGAGTGTCCAGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TGTATACGCAGAGACTCTACCTCCTTCTTGGTTTGGGGGTCTTCCTaGAACTGCAGGATCTCCTGGACTACCTCTCTAGTCTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: CIRRDSTSFLVWGSS*NCRISWTTSLVCTC
Trigger: ACAGGTGCAGACTAGAGAGGTAGTCCAGGAGATCCTGCAGTTCCAGGAAGACCCCCAAACCAAGAAGGAGGTAGAGTCTCTGCGTATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGAACCGTTGGGCTGTATTaGCCTTTGTTTCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRTVGLY*PLFLFL
Trigger: CAGGAAGAGAAACAAAGGCAAATACAGCCCAACGGT...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTGGGTGCTTCATGTGCTaGGCGATGGCCGAATCTGCC +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILAGCFMC*AMAESA
Trigger: GGCAGATTCGGCCATCGCCAAGCACATGAAGCACCC...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAGCCTCCAGGTTCCGGTaGATGAAATTCTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAASRFR*MKFSYW
Trigger: CCAGTACGAGAATTTCATCAACCGGAACCTGGAGGC...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGATTGATTCTTTCTTCTTaGGCCTCCAGGTTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRLILSS*ASRFRL
Trigger: CAACCGGAACCTGGAGGCCAAAGAAGAAAGAATCAA...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCACGCTCATATTTCTGGTaGGTGTCTTCTACCCGGGTC +
Preference number: 5 (lower is better)
Translates to: KKEGQQPQWTSLVELKEARSYFW*VSSTRV
Trigger: GACCCGGGTAGAAGACACCAACCAGAAATATGAGCG...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTCACCCAGGAGGGACTaGTGGGCCTGCAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILASPRRD*WACSSE
Trigger: TTCTGAGCTGCAGGCCCACAAGTCCCTCCTGGGTGA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTAACTTCACTCTCTGCCTaGGGATCTGGCCGCACGATC +
Preference number: 5 (lower is better)
Translates to: LYEGSGAEDTQEVAENELTSLSA*GSGRTI
Trigger: GATCGTGCGGCCAGATCCCAAGGCAGAGAGTGAAGT...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAGCCAGCTCTTCCTCCTaGCGTTTGATCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAASSSS*RLIFSS
Trigger: GGAAGAGAAGATCAAACGCAAGGAGGAAGAGCTGGC...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCGAATCCAGCTCCCTCTaGCTCTGGCTCTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGESSSL*LWLSSS
Trigger: GGAAGAGGAGAGCCAGAGCAAGAGGGAGCTGGATTC...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCATCAGAGGTGGGAGCAGGTCACTCACTCAGACTGGATGAGGCTGAGCTGAGATCCTTGGACATCTTCTaGAGGTCATCCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSEVGAGHSLRLDEAELRSLDIF*RSSSSF
Trigger: GAAGGAACTGGATGACCTCAAGAAGATGTCCAAGGA...TCTCAGCTCAGCCTCATCCAGTCTGAGTGAGTGACCTGCTCCCACCTCTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GTGTCCACAATGTTCCTTTCCACCTGGTCTGCATTCTTCTGCAGCTaGTCAATCAGATCTGAGAGTTCCTTGTTGGAGATGCTCCGCGTC +
Preference number: 5 (lower is better)
Translates to: VSTMFLSTWSAFFCS*SIRSESSLLEMLRV
Trigger: GACGCGGAGCATCTCCAACAAGGAACTCTCAGATCTGATTGAGCAGCTGCAGAAGAATGCAGACCAGGTGGAAAGGAACATTGTGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GCCTCGGTGTCCACAATGTTCCTTTCCACCTGGTCTGCATTCTTCTaGAGCTGCTCAATCAGATCTGAGAGTTCCTTGTTGGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: ASVSTMFLSTWSAFF*SCSIRSESSLLEML
Trigger: GAGCATCTCCAACAAGGAACTCTCAGATCTGATTGAGCAGCTGCAGAAGAATGCAGACCAGGTGGAAAGGAACATTGTGGACACCGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TGTGCCTCAATGGAGTTCCTCCCTGGGTGCTCAGCTGTCAGCAGTTaGTCACCTTCAGTGTGCAGTTTGTTGATTCTTTCTTCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: CASMEFLPGCSAVSS*SPSVCSLLILSSLA
Trigger: GGCCAAAGAAGAAAGAATCAACAAACTGCACACTGAAGGTGACCAACTGCTGACAGCTGAGCACCCAGGGAGGAACTCCATTGAGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CTCCGGGTCTCTAGCTGCAGGTTTTGCCGCTCTAGCTGTAGCTTGTaGTTTTCTTCTCTCAGGAAGTCCAGTTCCTTGGATGACTTGGAA +
Preference number: 5 (lower is better)
Translates to: LRVSSCRFCRSSCSL*FSSLRKSSSLDDLE
Trigger: TTCCAAGTCATCCAAGGAACTGGACTTCCTGAGAGAAGAAAACCACAAGCTACAGCTAGAGCGGCAAAACCTGCAGCTAGAGACCCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TCCCCATTAGGACCTTTCACTGATATCTCCTCCCAGTCGCACTCCTaGCTTCTGAGCTTCACAAACATTTTCCAGTCGATAAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SPLGPFTDISSQSHS*LLSFTNIFQSISPA
Trigger: GGCTGGGCTTATCGACTGGAAAATGTTTGTGAAGCTCAGAAGCCAGGAGTGCGACTGGGAGGAGATATCAGTGAAAGGTCCTAATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTTCCGCGTCTGCACCGTaGGGCTGTATTTGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SELANCCWCLSFWHILASSASAP*GCICLC
Trigger: ACAAAGGCAAATACAGCCCAACGGTGCAGACGCGGA...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAAGGTCACTGGCCACTTaGTCCAAGCCAGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGRSLAT*SKPASS
Trigger: GCTGCTGGCTGGCTTGGACAAAGTGGCCAGTGACCT...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp AAGAAGGAAGGTCAGCAGCCCCAGTGGACCAGTCTTGTTGAGTTGAAAGAGGCAGAGGTTGTTGAAACGTaGGTTGAGCTTGTGCACCTC +
Preference number: 5 (lower is better)
Translates to: KKEGQQPQWTSLVELKEAEVVET*VELVHL
Trigger: GAGGTGCACAAGCTCAACCAACGTTTCAACAACCTC...TGCCTCTTTCAACTCAACAAGACTGGTCCACTGGGGCTGCTGACCTTCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAGTCTGCACCTGTGGCTaGGTGTCCTTAAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGVCTCG*VSLRAW
Trigger: CCAGGCCCTTAAGGACACCAAGCCACAGGTGCAGAC...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTAGACTCTACCTCCTTCTaGGTTTGGGGGTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LYEGSGAEDTQEVAENELDSTSF*VWGSSW
Trigger: CCAGGAAGACCCCCAAACCAAGAAGGAGGTAGAGTC...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp AGCTTTCCCCCTTGTAGGGTCTCATGGGTCACTCCTGCTTCTGGTTaGTGTCTCAAGAGATTCAGTGCAAACTCCAAATTCTGTAGCCTC +
Preference number: 5 (lower is better)
Translates to: SFPPCRVSWVTPASG*CLKRFSANSKFCSL
Trigger: GAGGCTACAGAATTTGGAGTTTGCACTGAATCTCTTGAGACAGCAACCAGAAGCAGGAGTGACCCATGAGACCCTACAAGGGGGAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp ATCTCAATCTCTGATTGGAGTCTCCGGGTCTCTAGCTGCAGGTTTTaGCGCTCTAGCTGTAGCTTGTGGTTTTCTTCTCTCAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: ISISDWSLRVSSCRF*RSSCSLWFSSLRKS
Trigger: GGACTTCCTGAGAGAAGAAAACCACAAGCTACAGCTAGAGCGGCAAAACCTGCAGCTAGAGACCCGGAGACTCCAATCAGAGATTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp TTCTTCAGATCTCGAGTTTCTGTTGCTGCCATCTCAATCTCTGATTaGAGTCTCCGGGTCTCTAGCTGCAGGTTTTGCCGCTCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: FFRSRVSVAAISISD*SLRVSSCRFCRSSC
Trigger: ACAGCTAGAGCGGCAAAACCTGCAGCTAGAGACCCGGAGACTCCAATCAGAGATTGAGATGGCAGCAACAGAAACTCGAGATCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCCATGCGGCCCTTGGCTaGCTGGTCCAGCCAGTACAG +
Preference number: 5 (lower is better)
Translates to: DTQEVAENELTISIFKIIHAALG*LVQPVQ
Trigger: CTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATG...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAAAACGTTGGTTGAGCTaGTGCACCTCGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGKRWLS*CTSASC
Trigger: GCAGGAGGCCGAGGTGCACAAGCTCAACCAACGTTT...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTGTTGAAACGTTGGTaGAGCTTGTGCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGLLKRW*SLCTSA
Trigger: GGCCGAGGTGCACAAGCTCAACCAACGTTTCAACAA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTAGTATAGTCCTTCACCGCTaGCTGGTACTGCTGGGAATC +
Preference number: 5 (lower is better)
Translates to: SELANCCWCLSFWHILASIVLHR*LVLLGI
Trigger: GATTCCCAGCAGTACCAGCAAGCGGTGAAGGACTAT...ACTAGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTCCTCTTCCTTCACTTaGGCAGCAGGAGACTGCAGC +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILASSSFT*AAGDCS
Trigger: GCTGCAGTCTCCTGCTGCCAAAGTGAAGGAAGAGGA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCTCAGCACCCCTGAATTaGCGCTCCTGCTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPASAPLN*RSCSTS
Trigger: GCTGGTGGAGCAGGAGCGCAAATTCAGGGGTGCTGA...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTACCTTCTCACCAGTCTaGGCCTCCTCCTGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILATFSPV*ASSCSN
Trigger: ATTGGAGCAGGAGGAGGCCAAGACTGGTGAGAAGGT...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp GTCTGGATTTCCTCCTGGGCACTCTTGACCTCATTTTCCAGCTGTTaGCTTCGCTCTATCTCCTCCTCCAGTTCCTTCTTAATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: VWISSWALLTSFSSC*LRSISSSSSFLIFH
Trigger: ATGGAAGATTAAGAAGGAACTGGAGGAGGAGATAGAGCGAAGGCAACAGCTGGAAAATGAGGTCAAGAGTGCCCAGGAGGAAATCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 90 bp AACCTGGTCTTGTCCATGATCTCCTCCCTGAGCCTCTGGAGTTCCTaGTCTGTCTCTGGGTCAGTTGTATATTTAATGACCTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: NLVLSMISSLSLWSS*SVSGSVVYLMTSLV
Trigger: GACCAAAGAGGTCATTAAATATACAACTGACCCAGAGACAGAGCAGGAACTCCAGAGGCTCAGGGAGGAGATCATGGACAAGACCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp AGCATCAATGCTGTTTGTGAAGGCAGTCACCTCAGCTCGCAAATCTaGCTCATCTTCATACTGTACTACCTCCTGGCGTACAACCCTTTC +
Preference number: 5 (lower is better)
Translates to: SINAVCEGSHLSSQI*LIFILYYLLAYNPF
Trigger: GAAAGGGTTGTACGCCAGGAGGTAGTACAGTATGAAGATGAGCCAGATTTGCGAGCTGAGGTGACTGCCTTCACAAACAGCATTGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp AGGTCATCCAGTTCCTTCTCTAGGGACCACAGCCTAGAGTTTAGGTaGGTCCCAGAGTCTATCGTGGTTATGTTCTTCAGATCTCGAGTT +
Preference number: 5 (lower is better)
Translates to: RSSSSFSRDHSLEFR*VPESIVVMFFRSRV
Trigger: AACTCGAGATCTGAAGAACATAACCACGATAGACTCTGGGACCCACCTAAACTCTAGGCTGTGGTCCCTAGAGAAGGAACTGGATGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTGGGGCCCGATGGCTTaGACTTCATTGTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILAWGPMA*TSLWKM
Trigger: CATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCTCACTGTTCTGCTCCTaGTCCTTGGCCAGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: DTQEVAENELTISIFKIISLFCS*SLARWG
Trigger: GCCCCACCTGGCCAAGGACAAGGAGCAGAACAGTGA...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTCTTGAGTGGCACCACTaGCTGCCCTCGCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFLEWHH*LPSPLQ
Trigger: CTGCAGAGGCGAGGGCAGCAAGTGGTGCCACTCAAG...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTGCAATAGCTGGTTCTaGTGCTGTTCCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILACNSWF*CCSSAS
Trigger: GCTGGCTGAGGAACAGCACAAGAACCAGCTATTGCA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTTGCAGCCAGCCGCTGTaGCAGCCTCTGTACCTCCAG +
Preference number: 5 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFCSQPL*QPLYLQ
Trigger: CTGGAGGTACAGAGGCTGCAACAGCGGCTGGCTGCA...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp AGAGCCTTCTCCTGGTCATCCAGTTCCCGAAGCAACAGCTCTATCTaGTACCGGTCTTTGAAGTCAGGGCTATATTTCTGGTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: RAFSWSSSSRSNSSI*YRSLKSGLYFWFKS
Trigger: AGACTTGAACCAGAAATATAGCCCTGACTTCAAAGACCGGTATCAGATAGAGCTGTTGCTTCGGGAACTGGATGACCAGGAGAAGGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 90 bp CATGCAGTTTATCAATCTGCCGCAGCTCAGCATCAATGCTGTTTGTaGAGGCAGTCACCTCAGCTCGCAAATCTGGCTCATCTTCATACT +
Preference number: 5 (lower is better)
Translates to: HAVYQSAAAQHQCCL*RQSPQLANLAHLHT
Trigger: AGTATGAAGATGAGCCAGATTTGCGAGCTGAGGTGACTGCCTTCACAAACAGCATTGATGCTGAGCTGCGGCAGATTGATAAACTGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CATATTGAGCAGCGGTTAGCCTGCCACTCTGAAGAGCGTCCTCAATaGAGAACTTCTTGCCTGACTTCCTGTCATGAATTACTGATGACT +
Preference number: 5 (lower is better)
Translates to: HIEQRLACHSEERPQ*RTSCLTSCHELLMT
Trigger: AGTCATCAGTAATTCATGACAGGAAGTCAGGCAAGAAGTTCTCCATTGAGGACGCTCTTCAGAGTGGCAGGCTAACCGCTGCTCAATATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp AATGTGGATAAAACACTTAGCTCAGAAGTCTATATGAAGGCTCGGGAGCAGAAGTCTGAGAGTTCCTTGTaGGAGATGCTCCGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: NVDKTLSSEVYMKAREQKSESSL*EMLRVC
Trigger: GCAGACGCGGAGCATCTCCAACAAGGAACTCTCAGA...CTTCTGCTCCCGAGCCTTCATATAGACTTCTGAGCTAAGTGTTTTATCCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGAGAGGCGCTGGATCTCTaGCTCAGTGTCACCTTTTTC +
Preference number: 5 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGEALDL*LSVTFF
Trigger: GAAAAAGGTGACACTGAGCAAGAGATCCAGCGCCTC...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTCCAGATCCTTGTCCTaGGACATCTTCTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGSRSLS*DIFLRS
Trigger: TGACCTCAAGAAGATGTCCAAGGACAAGGATCTGGA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GTTCCTTGGATGACTTGGAATTATAGAATTCTAGCTCAGATAACTTaGCTTCTAGCCGGGTCACCTCTGAATCCAGCTCCCTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: VPWMTWNYRILAQIT*LLAGSPLNPAPSCS
Trigger: AGAGCAAGAGGGAGCTGGATTCAGAGGTGACCCGGCTAGAAGCCAAGTTATCTGAGCTAGAATTCTATAATTCCAAGTCATCCAAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTCATTGTGGAAGATGTaGTGTTGCTCCACCTGGCTA +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILASLWKM*CCSTWL
Trigger: TAGCCAGGTGGAGCAACACAACATCTTCCACAATGA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTTCTATTAACCTGGTCTaGTCCATGATCTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: FSELANCCWCLSFWHILASINLV*SMISSL
Trigger: CAGGGAGGAGATCATGGACAAGACCAGGTTAATAGA...AGCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTTTTCAGAACTAGCAAACTGTTGTTGGTGCCTGTCTTTCTGGCACATCCTGGCTCAGTGTGCAGTTTGTaGATTCTTTCTTCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LFRTSKLLLVPVFLAHPGSVCSL*ILSSLA
Trigger: GGCCAAAGAAGAAAGAATCAACAAACTGCACACTGA...GCCAGGATGTGCCAGAAAGACAGGCACCAACAACAGTTTGCTAGTTCTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp TTATTTTATTATTCTTCAGTACATAGGAGCCCTGGTGTTCATGGAATGCCCGCCCTCATTTTCCAGCTGTaGCCTTCGCTCTATCTCCTC +
Preference number: 5 (lower is better)
Translates to: LFYYSSVHRSPGVHGMPALIFQL*PSLYLL
Trigger: GAGGAGATAGAGCGAAGGCAACAGCTGGAAAATGAG...GGCGGGCATTCCATGAACACCAGGGCTCCTATGTACTGAAGAATAATAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp GCTTGTGGTTTTCTTCTCTCAGGAAGTCCAGTTCCTTGGATGACTTaGAATTATAGAATTCTAGCTCAGATAACTTGGCTTCTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: ACGFLLSGSPVPWMT*NYRILAQITWLLAG
Trigger: CCCGGCTAGAAGCCAAGTTATCTGAGCTAGAATTCTATAATTCCAAGTCATCCAAGGAACTGGACTTCCTGAGAGAAGAAAACCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp CTATATGAAGGCTCGGGAGCAGAAGACACCCAGGAAGTTGCTGAGAATGAGTTACATGTCTTTGTGAAATaGGTGGTAGTCTTCCATGTA +
Preference number: 5 (lower is better)
Translates to: LYEGSGAEDTQEVAENELHVFVK*VVVFHV
Trigger: TACATGGAAGACTACCACCAATTTCACAAAGACATG...TAACTCATTCTCAGCAACTTCCTGGGTGTCTTCTGCTCCCGAGCCTTCATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTTACCTCCTTCTTGGTTaGGGGGTCTTCCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFYLLLG*GVFLEL
Trigger: CAGTTCCAGGAAGACCCCCAAACCAAGAAGGAGGTA...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCCTTCTGATACTTGGCTaGGAGTTCACTGTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: DTQEVAENELTISIFKIILLILG*EFTVLL
Trigger: GAGCAGAACAGTGAACTCCAAGCCAAGTATCAGAAG...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GACACCCAGGAAGTTGCTGAGAATGAGTTAACCATCTCCATCTTTAAGATAATCACCTTGAGCACCTCTTaGACAGTGATCTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: DTQEVAENELTISIFKIITLSTS*TVILPS
Trigger: AGAAGGCAAGATCACTGTCAAAGAGGTGCTCAAGGT...GATTATCTTAAAGATGGAGATGGTTAACTCATTCTCAGCAACTTCCTGGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp GCAGGCACTGTTGATAGTTTGATCCCAGTCAGAAAAATGGAATGGCAAGAAGGACCTTCAGTGTGCAGTTaGTTGATTCTTTCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: AGTVDSLIPVRKMEWQEGPSVCS*LILSSL
Trigger: CAAAGAAGAAAGAATCAACAAACTGCACACTGAAGG...TCCTTCTTGCCATTCCATTTTTCTGACTGGGATCAAACTATCAACAGTGCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTTGTAGCCTCTGTCTGTaGATGGCATTAACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFCSLCL*MALTSV
Trigger: CACAGAGGTTAATGCCATCAACAGACAGAGGCTACA...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS-3UTR CAA 90 bp ACTTCTAAGGCACTGAAAGTAAGGCTAGCACACCATCCATTACTAAGATCTTTTTCTTCCTCCTTGCGTTaGATCTTCTCTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: TSKALKVRLAHHPLLRSFSSSLR*IFSSWD
Trigger: ATCCCAGGAAGAGAAGATCAAACGCAAGGAGGAAGA...AAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGCCTTAGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 90 bp CTAGCTGTAGCTTGTGGTTTTCTTCTCTCAGGAAGTCCAGTTCCTTaGATGACTTGGAATTATAGAATTCTAGCTCAGATAACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: LAVACGFLLSGSPVP*MTWNYRILAQITWL
Trigger: AAGCCAAGTTATCTGAGCTAGAATTCTATAATTCCAAGTCATCCAAGGAACTGGACTTCCTGAGAGAAGAAAACCACAAGCTACAGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp CAGGGCCGCGTCCCGGTGCTCAGGGAGCTGCCCCTCTaGCATCCGGGCCAAGTCGCTCTGCATCTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: QGRVPVLRELPL*HPGQVALHLGL
Trigger: GAGGCCAAGATGCAGAGCGACTTGGCCCGGATGCAAGAGGGGCAGCTCCCTGAGCACCGGGACGCGGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp AGAGCCTCCACAGGGATGGGCTTGAGCGGCGTCTCGCGGCGGTACTaGAGTGGCACCACTTGCTGCCCTCGCCTCTGCAGCCCTCGCACC +
Preference number: 6 (lower is better)
Translates to: RASTGMGLSGVSRRY*SGTTCCPRLCSPRT
Trigger: GGTGCGAGGGCTGCAGAGGCGAGGGCAGCAAGTGGTGCCACTCAAGTACCGCCGCGAGACGCCGCTCAAGCCCATCCCTGTGGAGGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp ACGTTCTGCAGGGCCGCGTCCCGGTGCTCAGGGAGCTaGCCCTCTTGCATCCGGGCCAAGTCGCTCTGCATC +
Preference number: 6 (lower is better)
Translates to: TFCRAASRCSGS*PSCIRAKSLCI
Trigger: GATGCAGAGCGACTTGGCCCGGATGCAAGAGGGGCAGCTCCCTGAGCACCGGGACGCGGCCCTGCAGAACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CAGCCGCTGTTGCAGCCTCTGTACCTCCAGCTCGGCTaGCCTACGTGCCTGCCTCTCCCGCTCCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QPLLQPLYLQLG*PTCLPLPLQLL
Trigger: GAGGAGCTGGAGCGGGAGAGGCAGGCACGTAGGGCAGCCGAGCTGGAGGTACAGAGGCTGCAACAGCGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp AGCGGCTCAAGCTCACCCTCCAGTAGCTGCCTCCGGTaGCGCTCTTCCTCCAGCTGGGCTCGGAGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: SGSSSPSSSCLR*RSSSSWARSRA
Trigger: TGCCCTGCTCCGAGCCCAGCTGGAGGAAGAGCGGCACCGGAGGCAGCTACTGGAGGGTGAGCTTGAGCCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GATGGGCTTGAGCGGCGTCTCGCGGCGGTACTTGAGTaGCACCACTTGCTGCCCTCGCCTCTGCAGCCCTCG +
Preference number: 6 (lower is better)
Translates to: DGLERRLAAVLE*HHLLPSPLQPS
Trigger: CGAGGGCTGCAGAGGCGAGGGCAGCAAGTGGTGCCACTCAAGTACCGCCGCGAGACGCCGCTCAAGCCCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCTGAGTCAGACACGTTCTGCAGGGCCGCGTCCCGGTaGTCAGGGAGCTGCCCCTCTTGCATCCGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SESDTFCRAASR*SGSCPSCIRAK
Trigger: CTTGGCCCGGATGCAAGAGGGGCAGCTCCCTGAGCACCGGGACGCGGCCCTGCAGAACGTGTCTGACTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCTCGTACTGGCGGCGGCGGCTGGGGTAGTCGAGGTTaGGGTCGCTCCAGTCATACTGCATGCGGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: SRTGGGGWGSRG*GRSSHTACGPW
Trigger: CCAAGGGCCGCATGCAGTATGACTGGAGCGACCGCAACCTCGACTACCCCAGCCGCCGCCGCCAGTACGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CTGGTTGGTGTCTTCTACCCGGGTCTTCAGCAAGGGTaGGGTGCCGCTGGCCGGGAGGGCCTGCACAAAGGC +
Preference number: 6 (lower is better)
Translates to: LVGVFYPGLQQG*GAAGREGLHKG
Trigger: GCCTTTGTGCAGGCCCTCCCGGCCAGCGGCACCGCACCCTTGCTGAAGACCCGGGTAGAAGACACCAACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TGCACCTCGGCCTCCTGCCGCTCCAGGTCAGGGCAGTaGTCTTGGAAGCGGCTGGCCAGTGAGCTGGAACAC +
Preference number: 6 (lower is better)
Translates to: CTSASCRSRSGQ*SWKRLASELEH
Trigger: GTGTTCCAGCTCACTGGCCAGCCGCTTCCAAGAGCACTGCCCTGACCTGGAGCGGCAGGAGGCCGAGGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CTTCTACCCGGGTCTTCAGCAAGGGTGCGGTGCCGCTaGCCGGGAGGGCCTGCACAAAGGCTTCACACTCGG +
Preference number: 6 (lower is better)
Translates to: LLPGSSARVRCR*PGGPAQRLHTR
Trigger: CCGAGTGTGAAGCCTTTGTGCAGGCCCTCCCGGCCAGCGGCACCGCACCCTTGCTGAAGACCCGGGTAGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TCCAGTAGCTGCCTCCGGTGCCGCTCTTCCTCCAGCTaGGCTCGGAGCAGGGCATGCTCCCTGGTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SSSCLRCRSSSS*ARSRACSLVCC
Trigger: ACAGCAGACCAGGGAGCATGCCCTGCTCCGAGCCCAGCTGGAGGAAGAGCGGCACCGGAGGCAGCTACTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp ACAGGGATGGGCTTGAGCGGCGTCTCGCGGCGGTACTaGAGTGGCACCACTTGCTGCCCTCGCCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: TGMGLSGVSRRY*SGTTCCPRLCS
Trigger: GCTGCAGAGGCGAGGGCAGCAAGTGGTGCCACTCAAGTACCGCCGCGAGACGCCGCTCAAGCCCATCCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TGGTGTCTTCTACCCGGGTCTTCAGCAAGGGTGCGGTaGCGCTGGCCGGGAGGGCCTGCACAAAGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: WCLLPGSSARVR*RWPGGPAQRLH
Trigger: GTGAAGCCTTTGTGCAGGCCCTCCCGGCCAGCGGCACCGCACCCTTGCTGAAGACCCGGGTAGAAGACACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CTGTTCTCGTATGAGGCCAGCAGCTCCCTGCCCCGCTaGAGACTGTTCTCCAGGCGGTTGGCCACGTCCACC +
Preference number: 6 (lower is better)
Translates to: LFSYEASSSLPR*RLFSRRLATST
Trigger: GGTGGACGTGGCCAACCGCCTGGAGAACAGTCTGCAGCGGGGCAGGGAGCTGCTGGCCTCATACGAGAACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CACTTCAGCCTCTCGGGCGCCTTTCTGGCGCCGCAGTaGCTCCAGCTCCTCCCGAAGCTGCAAGACCTCATC +
Preference number: 6 (lower is better)
Translates to: HFSLSGAFLAPQ*LQLLPKLQDLI
Trigger: GATGAGGTCTTGCAGCTTCGGGAGGAGCTGGAGGCACTGCGGCGCCAGAAAGGCGCCCGAGAGGCTGAAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TTTCTACGCAGCGGCTCAAGCTCACCCTCCAGTAGCTaGCTCCGGTGCCGCTCTTCCTCCAGCTGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: FLRSGSSSPSSS*LRCRSSSSWAR
Trigger: CCGAGCCCAGCTGGAGGAAGAGCGGCACCGGAGGCAGCTACTGGAGGGTGAGCTTGAGCCGCTGCGTAGAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp AGCACGTACAGCAGCTTTTCTGAGTCAGACACGTTCTaGAGGGCCGCGTCCCGGTGCTCAGGGAGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: STYSSFSESDTF*RAASRCSGSCP
Trigger: GGGGCAGCTCCCTGAGCACCGGGACGCGGCCCTGCAGAACGTGTCTGACTCAGAAAAGCTGCTGTACGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TTGGCCTCCTCCTGCTCCAATGCAGCCAGCCGCTGTTaGAGCCTCTGTACCTCCAGCTCGGCTGCCCTACGT +
Preference number: 6 (lower is better)
Translates to: LASSCSNAASRC*SLCTSSSAALR
Trigger: ACGTAGGGCAGCCGAGCTGGAGGTACAGAGGCTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp CCCTGGTCACTCTCAAAGTCACAGAGAGCCTCCACAGGGATGGGCTaGAGCGGCGTCTCGCGGCGGTACTTGAGTGGCACCACTTGCTGC +
Preference number: 6 (lower is better)
Translates to: PWSLSKSQRASTGMG*SGVSRRYLSGTTCC
Trigger: GCAGCAAGTGGTGCCACTCAAGTACCGCCGCGAGACGCCGCTCAAGCCCATCCCTGTGGAGGCTCTCTGTGACTTTGAGAGTGACCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TGCTCCACCAGCTCCAGGCGGAGGTTGGCCACTTCACTCTCTGCCTaGGGATCTGGCCGCACGATCTCTCGGACCTTCTCCTGTACCACC +
Preference number: 6 (lower is better)
Translates to: CSTSSRRRLATSLSA*GSGRTISRTFSCTT
Trigger: GGTGGTACAGGAGAAGGTCCGAGAGATCGTGCGGCCAGATCCCAAGGCAGAGAGTGAAGTGGCCAACCTCCGCCTGGAGCTGGTGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp GGCCGAATCTGCCTCCAGCACGTACAGCAGCTTTTCTaGGTCAGACACGTTCTGCAGGGCCGCGTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: GRICLQHVQQLF*VRHVLQGRVPV
Trigger: CACCGGGACGCGGCCCTGCAGAACGTGTCTGACTCAGAAAAGCTGCTGTACGTGCTGGAGGCAGATTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TGGCGGATGTCCTCGGCGATCATGTCCCCCTGTGGGTaGTTCATGTGCTTGGCGATGGCCGAATCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: WRMSSAIMSPCG*FMCLAMAESAS
Trigger: GGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGGACATCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CGGTCGCTCCAGTCATACTGCATGCGGCCCTTGGCTTaGTGGTCCAGCCAGTACAGCTCATTGGTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: RSLQSYCMRPLA*WSSQYSSLVQR
Trigger: GCGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TTGACCACATACTCCTGTCCCCCATCCCTGGTCTCCTaGTCTAGAGCCTGCAGCCGGAGCTGCAGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: LTTYSCPPSLVS*SRACSRSCSAP
Trigger: GGGAGCACTGCAGCTCCGGCTGCAGGCTCTAGAGCAGGAGACCAGGGATGGGGGACAGGAGTATGTGGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CAGCTGGCGGATGTCCTCGGCGATCATGTCCCCCTGTaGGTGCTTCATGTGCTTGGCGATGGCCGAATCTGC +
Preference number: 6 (lower is better)
Translates to: QLADVLGDHVPL*VLHVLGDGRIC
Trigger: GCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGGACATCCGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TTGCTCCCAGTCGCCTTCTGCCTCACACTTCGGTACTaGCTGCCCAGGCTGTCAGCAAGAGCCAAGGCCTCG +
Preference number: 6 (lower is better)
Translates to: LLPVAFCLTLRY*LPRLSARAKAS
Trigger: CGAGGCCTTGGCTCTTGCTGACAGCCTGGGCAGCCAGTACCGAAGTGTGAGGCAGAAGGCGACTGGGAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GCTCCAGGCGGAGGTTGGCCACTTCACTCTCTGCCTTaGGATCTGGCCGCACGATCTCTCGGACCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: APGGGWPLHSLP*DLAARSLGPSP
Trigger: AGGAGAAGGTCCGAGAGATCGTGCGGCCAGATCCCAAGGCAGAGAGTGAAGTGGCCAACCTCCGCCTGGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp GCGGTCGCTCCAGTCATACTGCATGCGGCCCTTGGCTaGCTGGTCCAGCCAGTACAGCTCATTGGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: AVAPVILHAALG*LVQPVQLIGAA
Trigger: CGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp CTCTCAAAGTCACAGAGAGCCTCCACAGGGATGGGCTaGAGCGGCGTCTCGCGGCGGTACTTGAGTGGCACC +
Preference number: 6 (lower is better)
Translates to: LSKSQRASTGMG*SGVSRRYLSGT
Trigger: GGTGCCACTCAAGTACCGCCGCGAGACGCCGCTCAAGCCCATCCCTGTGGAGGCTCTCTGTGACTTTGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp AGCTCCAGGCGGAGGTTGGCCACTTCACTCTCTGCCTaGGGATCTGGCCGCACGATCTCTCGGACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSRRRLATSLSA*GSGRTISRTFS
Trigger: GGAGAAGGTCCGAGAGATCGTGCGGCCAGATCCCAAGGCAGAGAGTGAAGTGGCCAACCTCCGCCTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp CTCCGTTCCACCTGCTGGCTGAGGTTGTTGAAACGTTGGTTGAGCTaGTGCACCTCGGCCTCCTGCCGCTCCAGGTCAGGGCAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: LRSTCWLRLLKRWLS*CTSASCRSRSGQCS
Trigger: AGAGCACTGCCCTGACCTGGAGCGGCAGGAGGCCGAGGTGCACAAGCTCAACCAACGTTTCAACAACCTCAGCCAGCAGGTGGAACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp GGCATGCTCCCTGGTCTGCTGTGGGTCCTGCTGCAGCACCACCTTTaGTGTGTGGGTCACCTTCTCACCAGTCTTGGCCTCCTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: GMLPGLLWVLLQHHL*CVGHLLTSLGLLLL
Trigger: GAGCAGGAGGAGGCCAAGACTGGTGAGAAGGTGACCCACACACAAAAGGTGGTGCTGCAGCAGGACCCACAGCAGACCAGGGAGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp GGGAGCTGCCCCTCTTGCATCCGGGCCAAGTCGCTCTaGATCTTGGCCTCGGTGTCCACAATGTTCCTTTCC +
Preference number: 6 (lower is better)
Translates to: GSCPSCIRAKSL*ILASVSTMFLS
Trigger: GGAAAGGAACATTGTGGACACCGAGGCCAAGATGCAGAGCGACTTGGCCCGGATGCAAGAGGGGCAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCCTCGGCGATCATGTCCCCCTGTGGGTGCTTCATGTaGTTGGCGATGGCCGAATCTGCCTCCAGCACGTAC +
Preference number: 6 (lower is better)
Translates to: SSAIMSPCGCFM*LAMAESASSTY
Trigger: GTACGTGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CTCGGGTCGGCCTCTTTCACTGCCAGGCTGTACATCTaGTTGTGTTTCCCCCGCAGGTTGGTCACGCGCTCT +
Preference number: 6 (lower is better)
Translates to: LGSASFTARLYI*LCFPRRLVTRS
Trigger: AGAGCGCGTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGGCAGTGAAAGAGGCCGACCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp GGTAGTCGAGGTTGCGGTCGCTCCAGTCATACTGCATaGGGCCCTTGGCTTGCTGGTCCAGCCAGTACAGCT +
Preference number: 6 (lower is better)
Translates to: GSRGCGRSSHTA*GPWLAGPASTA
Trigger: AGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGACCGCAACCTCGACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CGCTGCTGGAGTGCATGTTTGCTCCCAGTCGCCTTCTaGCTCACACTTCGGTACTGGCTGCCCAGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: RCWSACLLPVAF*LTLRYWLPRLS
Trigger: TGACAGCCTGGGCAGCCAGTACCGAAGTGTGAGGCAGAAGGCGACTGGGAGCAAACATGCACTCCAGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp GAGGCATCTCCAGGGTTCTCCGTCCTTAGCACCTCATaGCGCTGCTGGAGTGCATGTTTGCTCCCAGTCGCC +
Preference number: 6 (lower is better)
Translates to: EASPGFSVLSTS*RCWSACLLPVA
Trigger: GGCGACTGGGAGCAAACATGCACTCCAGCAGCGGCATGAGGTGCTAAGGACGGAGAACCCTGGAGATGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TTGGCCCGCTCCGCACTATCCTCAATTGCCCGTCCCTaGTCAAGTGGTGGCCGTAGGATCCCTGTGATAGCC +
Preference number: 6 (lower is better)
Translates to: LARSALSSIARP*SSGGRRIPVIA
Trigger: GGCTATCACAGGGATCCTACGGCCACCACTTGAGCAGGGACGGGCAATTGAGGATAGTGCGGAGCGGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TGCTGGCTGAGGTTGTTGAAACGTTGGTTGAGCTTGTaGACCTCGGCCTCCTGCCGCTCCAGGTCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: CWLRLLKRWLSL*TSASCRSRSGQ
Trigger: CTGCCCTGACCTGGAGCGGCAGGAGGCCGAGGTGCACAAGCTCAACCAACGTTTCAACAACCTCAGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp AGCTGGTTCTTGTGCTGTTCCTCAGCCAGCGTCTGCTaGAGCTGCTGGAAGCTCTCCTCCAGGGCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: SWFLCCSSASVC*SCWKLSSRAGS
Trigger: AGACCCTGCCCTGGAGGAGAGCTTCCAGCAGCTGCAGCAGACGCTGGCTGAGGAACAGCACAAGAACCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp ACCCTGCTCTTCTCAGCAGCCAGGGCTGCTACACGCTaGTGTAAGAGTAGCACTTCAGCCTCTCGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: TLLFSAARAATR*CKSSTSASRAP
Trigger: AGGCGCCCGAGAGGCTGAAGTGCTACTCTTACAGCAGCGTGTAGCAGCCCTGGCTGCTGAGAAGAGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCTGAGAAGTTCTGTCTTCTCCCGCTGGCCAGAGCGTaGCTTGGCAGCCTCGTCCTCATACTGGCGGGTGAG +
Preference number: 6 (lower is better)
Translates to: SEKFCLLPLARA*LGSLVLILAGE
Trigger: CTCACCCGCCAGTATGAGGACGAGGCTGCCAAGGCACGCTCTGGCCAGCGGGAGAAGACAGAACTTCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TTCAGCTGCTCCTCAGCACCCCTGAATTTGCGCTCCTaGTCCACCAGCTCCAGGCGGAGGTTGGCCACTTCA +
Preference number: 6 (lower is better)
Translates to: FSCSSAPLNLRS*STSSRRRLATS
Trigger: TGAAGTGGCCAACCTCCGCCTGGAGCTGGTGGAGCAGGAGCGCAAATTCAGGGGTGCTGAGGAGCAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CACCTTCTCACCAGTCTTGGCCTCCTCCTGCTCCAATaGAGCCAGCCGCTGTTGCAGCCTCTGTACCTCCAG +
Preference number: 6 (lower is better)
Translates to: HLLTSLGLLLLQ*SQPLLQPLYLQ
Trigger: CTGGAGGTACAGAGGCTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAAGACTGGTGAGAAGGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp GTGTGGGTCACCTTCTCACCAGTCTTGGCCTCCTCCTaGTCCAATGCAGCCAGCCGCTGTTGCAGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: VWVTFSPVLASS*SNAASRCCSLC
Trigger: ACAGAGGCTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAAGACTGGTGAGAAGGTGACCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CGGCGATCATGTCCCCCTGTGGGTGCTTCATGTGCTTaGCGATGGCCGAATCTGCCTCCAGCACGTACAGCA +
Preference number: 6 (lower is better)
Translates to: RRSCPPVGASCA*RWPNLPPARTA
Trigger: TGCTGTACGTGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CCAGGCTGTACATCTGCTTGTGTTTCCCCCGCAGGTTaGTCACGCGCTCTTTCAGCTGGCGGATGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: PGCTSACVSPAG*SRALSAGGCPR
Trigger: CCGAGGACATCCGCCAGCTGAAAGAGCGCGTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TCGCTCCAGTCATACTGCATGCGGCCCTTGGCTTGCTaGTCCAGCCAGTACAGCTCATTGGTGCAGCGCTGC +
Preference number: 6 (lower is better)
Translates to: SLQSYCMRPLAC*SSQYSSLVQRC
Trigger: GCAGCGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GGTTGCGGTCGCTCCAGTCATACTGCATGCGGCCCTTaGCTTGCTGGTCCAGCCAGTACAGCTCATTGGTGC +
Preference number: 6 (lower is better)
Translates to: GCGRSSHTACGP*LAGPASTAHWC
Trigger: GCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGACCGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CTCCGTTCCACCTGCTGGCTGAGGTTGTTGAAACGTTaGTTGAGCTTGTGCACCTCGGCCTCCTGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: LRSTCWLRLLKR*LSLCTSASCRS
Trigger: GGAGCGGCAGGAGGCCGAGGTGCACAAGCTCAACCAACGTTTCAACAACCTCAGCCAGCAGGTGGAACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GCGGAGGTTGGCCACTTCACTCTCTGCCTTGGGATCTaGCCGCACGATCTCTCGGACCTTCTCCTGTACCAC +
Preference number: 6 (lower is better)
Translates to: AEVGHFTLCLGI*PHDLSDLLLYH
Trigger: GTGGTACAGGAGAAGGTCCGAGAGATCGTGCGGCCAGATCCCAAGGCAGAGAGTGAAGTGGCCAACCTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp GCCAGGCTGTACATCTGCTTGTGTTTCCCCCGCAGGTaGGTCACGCGCTCTTTCAGCTGGCGGATGTCCTCG +
Preference number: 6 (lower is better)
Translates to: ARLYICLCFPRR*VTRSFSWRMSS
Trigger: CGAGGACATCCGCCAGCTGAAAGAGCGCGTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp CGTTCCACCTGCTGGCTGAGGTTGTTGAAACGTTGGTaGAGCTTGTGCACCTCGGCCTCCTGCCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RSTCWLRLLKRW*SLCTSASCRSR
Trigger: CCTGGAGCGGCAGGAGGCCGAGGTGCACAAGCTCAACCAACGTTTCAACAACCTCAGCCAGCAGGTGGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp CCTCCGTTCCACCTGCTGGCTGAGGTTGTTGAAACGTaGGTTGAGCTTGTGCACCTCGGCCTCCTGCCGCTC +
Preference number: 6 (lower is better)
Translates to: PPFHLLAEVVET*VELVHLGLLPL
Trigger: GAGCGGCAGGAGGCCGAGGTGCACAAGCTCAACCAACGTTTCAACAACCTCAGCCAGCAGGTGGAACGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp AGAAGTTCTGTCTTCTCCCGCTGGCCAGAGCGTGCCTaGGCAGCCTCGTCCTCATACTGGCGGGTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: RSSVFSRWPERA*AASSSYWRVRS
Trigger: TGACCTCACCCGCCAGTATGAGGACGAGGCTGCCAAGGCACGCTCTGGCCAGCGGGAGAAGACAGAACTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TTGACTCTCGGGTCGGCCTCTTTCACTGCCAGGCTGTACATCTGCTaGTGTTTCCCCCGCAGGTTGGTCACGCGCTCTTTCAGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: LTLGSASFTARLYIC*CFPRRLVTRSFSWR
Trigger: CCGCCAGCTGAAAGAGCGCGTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGGCAGTGAAAGAGGCCGACCCGAGAGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp GTCGAGGTTGCGGTCGCTCCAGTCATACTGCATGCGGCCCTTGGCTaGCTGGTCCAGCCAGTACAGCTCATTGGTGCAGCGCTGCATGTA +
Preference number: 6 (lower is better)
Translates to: VEVAVAPVILHAALG*LVQPVQLIGAALHV
Trigger: TACATGCAGCGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGACCGCAACCTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TGCTGCAGCACCACCTTTTGTGTGTGGGTCACCTTCTCACCAGTCTaGGCCTCCTCCTGCTCCAATGCAGCCAGCCGCTGTTGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: CCSTTFCVWVTFSPV*ASSCSNAASRCCSL
Trigger: GAGGCTGCAACAGCGGCTGGCTGCATTGGAGCAGGAGGAGGCCAAGACTGGTGAGAAGGTGACCCACACACAAAAGGTGGTGCTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp GCTTGTCCAGCTTCTCGTCCACCAGTGTGTCCCAGTTaGCTCTCGGGTCGGCCTCTTTCACTGCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: ACPASRPPVCPS*LSGRPLSLPGC
Trigger: ACAGCCTGGCAGTGAAAGAGGCCGACCCGAGAGTCAACTGGGACACACTGGTGGACGAGAAGCTGGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp CCTGGGCTCTGTCTGGCTCAATGCGCAAGACCTCCTTaGCCACATACTCCTGTCCCCCATCCCTGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: PGLCLAQCARPP*PHTPVPHPWSP
Trigger: AGGAGACCAGGGATGGGGGACAGGAGTATGTGGTCAAGGAGGTCTTGCGCATTGAGCCAGACAGAGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CGGTACTTGAGTGGCACCACTTGCTGCCCTCGCCTCTaGAGCCCTCGCACCACATCCTCATACTTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: RYLSGTTCCPRL*SPRTTSSYLSR
Trigger: TCTGGACAAGTATGAGGATGTGGTGCGAGGGCTGCAGAGGCGAGGGCAGCAAGTGGTGCCACTCAAGTACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCTCCAGGGTTCTCCGTCCTTAGCACCTCATGCCGCTaGTGGAGTGCATGTTTGCTCCCAGTCGCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SPGFSVLSTSCR*WSACLLPVAFC
Trigger: GCAGAAGGCGACTGGGAGCAAACATGCACTCCAGCAGCGGCATGAGGTGCTAAGGACGGAGAACCCTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CCGGGAGGGCCTGCACAAAGGCTTCACACTCGGCTGTaGACTGCGTCTTCTCTGGCTCAATCTGTAGCAGCT +
Preference number: 6 (lower is better)
Translates to: PGGPAQRLHTRL*TASSLAQSVAA
Trigger: AGCTGCTACAGATTGAGCCAGAGAAGACGCAGTGCACAGCCGAGTGTGAAGCCTTTGTGCAGGCCCTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp AGCAGGGCATGCTCCCTGGTCTGCTGTGGGTCCTGCTaGAGCACCACCTTTTGTGTGTGGGTCACCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SRACSLVCCGSC*STTFCVWVTFS
Trigger: TGAGAAGGTGACCCACACACAAAAGGTGGTGCTGCAGCAGGACCCACAGCAGACCAGGGAGCATGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GCCCCTCTTGCATCCGGGCCAAGTCGCTCTGCATCTTaGCCTCGGTGTCCACAATGTTCCTTTCCACCTGGT +
Preference number: 6 (lower is better)
Translates to: APLASGPSRSAS*PRCPQCSFPPG
Trigger: ACCAGGTGGAAAGGAACATTGTGGACACCGAGGCCAAGATGCAGAGCGACTTGGCCCGGATGCAAGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GGCCCTTGGCTTGCTGGTCCAGCCAGTACAGCTCATTaGTGCAGCGCTGCATGTAATCCTGCAGCGAGCTCA +
Preference number: 6 (lower is better)
Translates to: GPWLAGPASTAH*CSAACNPAASS
Trigger: TGAGCTCGCTGCAGGATTACATGCAGCGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CAGGGCAGTGCTCTTGGAAGCGGCTGGCCAGTGAGCTaGAACACTGCTTGGCCACCTGTAGGTTCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: QGSALGSGWPVS*NTAWPPVGSVP
Trigger: TGGAACAGAACCTACAGGTGGCCAAGCAGTGTTCCAGCTCACTGGCCAGCCGCTTCCAAGAGCACTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GGTTGTAACCACTGCAGTATTCATCGTAGGCAGCCCTaGCACTCTGCAGGCTCTGGGCCCTCCGTTCCACCT +
Preference number: 6 (lower is better)
Translates to: GCNHCSIHRRQP*HSAGSGPSVPP
Trigger: AGGTGGAACGGAGGGCCCAGAGCCTGCAGAGTGCCAGGGCTGCCTACGATGAATACTGCAGTGGTTACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TCCAGCTCCTCCCGAAGCTGCAAGACCTCATCCTCCTaGGCTCTGTCTGGCTCAATGCGCAAGACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SSSSRSCKTSSS*ALSGSMRKTSL
Trigger: CAAGGAGGTCTTGCGCATTGAGCCAGACAGAGCCCAGGAGGATGAGGTCTTGCAGCTTCGGGAGGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TGGCCAGAGCGTGCCTTGGCAGCCTCGTCCTCATACTaGCGGGTGAGGTCATTGACTTCTCTCTCCACAGCT +
Preference number: 6 (lower is better)
Translates to: WPERALAASSSY*RVRSLTSLSTA
Trigger: AGCTGTGGAGAGAGAAGTCAATGACCTCACCCGCCAGTATGAGGACGAGGCTGCCAAGGCACGCTCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TTTCCAGTCGATAAGCCCAGCCCGGTGAGCCTCCTCTaGGGACAGCTCACGACCTGTGTCAGGGTCTATGAC +
Preference number: 6 (lower is better)
Translates to: FPVDKPSPVSLL*GQLTTCVRVYD
Trigger: GTCATAGACCCTGACACAGGTCGTGAGCTGTCCCCAGAGGAGGCTCACCGGGCTGGGCTTATCGACTGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp GGGTCGGCCTCTTTCACTGCCAGGCTGTACATCTGCTaGTGTTTCCCCCGCAGGTTGGTCACGCGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: GSASFTARLYIC*CFPRRLVTRSF
Trigger: GAAAGAGCGCGTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGGCAGTGAAAGAGGCCGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp AGCTTGTCCAGCTTCTCGTCCACCAGTGTGTCCCAGTaGACTCTCGGGTCGGCCTCTTTCACTGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SLSSFSSTSVSQ*TLGSASFTARL
Trigger: CAGCCTGGCAGTGAAAGAGGCCGACCCGAGAGTCAACTGGGACACACTGGTGGACGAGAAGCTGGACAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp AGGTTGCGGTCGCTCCAGTCATACTGCATGCGGCCCTaGGCTTGCTGGTCCAGCCAGTACAGCTCATTGGTG +
Preference number: 6 (lower is better)
Translates to: RLRSLQSYCMRP*ACWSSQYSSLV
Trigger: CACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGGGCCGCATGCAGTATGACTGGAGCGACCGCAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp CCTGGTCTGCTGTGGGTCCTGCTGCAGCACCACCTTTaGTGTGTGGGTCACCTTCTCACCAGTCTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: PGLLWVLLQHHL*CVGHLLTSLGL
Trigger: GAGGCCAAGACTGGTGAGAAGGTGACCCACACACAAAAGGTGGTGCTGCAGCAGGACCCACAGCAGACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TCAGGGAGCTGCCCCTCTTGCATCCGGGCCAAGTCGCTCTGCATCTaGGCCTCGGTGTCCACAATGTTCCTTTCCACCTGGTCTGCATTC +
Preference number: 6 (lower is better)
Translates to: SGSCPSCIRAKSLCI*ASVSTMFLSTWSAF
Trigger: GAATGCAGACCAGGTGGAAAGGAACATTGTGGACACCGAGGCCAAGATGCAGAGCGACTTGGCCCGGATGCAAGAGGGGCAGCTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp CGGATGTCCTCGGCGATCATGTCCCCCTGTGGGTGCTTCATGTGCTaGGCGATGGCCGAATCTGCCTCCAGCACGTACAGCAGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: RMSSAIMSPCGCFMC*AMAESASSTYSSFS
Trigger: AGAAAAGCTGCTGTACGTGCTGGAGGCAGATTCGGCCATCGCCAAGCACATGAAGCACCCACAGGGGGACATGATCGCCGAGGACATCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TCTTTCACTGCCAGGCTGTACATCTGCTTGTGTTTCCCCCGCAGGTaGGTCACGCGCTCTTTCAGCTGGCGGATGTCCTCGGCGATCATG +
Preference number: 6 (lower is better)
Translates to: SFTARLYICLCFPRR*VTRSFSWRMSSAIM
Trigger: CATGATCGCCGAGGACATCCGCCAGCTGAAAGAGCGCGTGACCAACCTGCGGGGGAAACACAAGCAGATGTACAGCCTGGCAGTGAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp CTATCCACCAGAGGAAGGTCAGTCCCAAAGCTCTGGCTGCTCAGCTaGTCCAGCTTCTCGTCCACCAGTGTGTCCCAGTTGACTCTCGGG +
Preference number: 6 (lower is better)
Translates to: LSTRGRSVPKLWLLS*SSFSSTSVSQLTLG
Trigger: CCCGAGAGTCAACTGGGACACACTGGTGGACGAGAAGCTGGACAAGCTGAGCAGCCAGAGCTTTGGGACTGACCTTCCTCTGGTGGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp AGGCATTGTGTCGTCCTGAATCAGCCTGTTCTCGTATaGGGCCAGCAGCTCCCTGCCCCGCTGCAGACTGTT +
Preference number: 6 (lower is better)
Translates to: RHCVVLNQPVLV*GQQLPAPLQTV
Trigger: AACAGTCTGCAGCGGGGCAGGGAGCTGCTGGCCTCATACGAGAACAGGCTGATTCAGGACGACACAATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TGTGTCCCAGTTGACTCTCGGGTCGGCCTCTTTCACTaGCAGGCTGTACATCTGCTTGTGTTTCCCCCGCAG +
Preference number: 6 (lower is better)
Translates to: CVPVDSRVGLFH*QAVHLLVFPPQ
Trigger: CTGCGGGGGAAACACAAGCAGATGTACAGCCTGGCAGTGAAAGAGGCCGACCCGAGAGTCAACTGGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CCTTGGCTTGCTGGTCCAGCCAGTACAGCTCATTGGTaGAGCGCTGCATGTAATCCTGCAGCGAGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: PWLAGPASTAHW*SAACNPAASSG
Trigger: ACCTGAGCTCGCTGCAGGATTACATGCAGCGCTGCACCAATGAGCTGTACTGGCTGGACCAGCAAGCCAAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GCAGCAGGAGACTGCAGCCTGGCTCTCTTGTTCACATaGCTGTTCCGTCCATTCTCCAGGTCCAGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: AAGDCSLALLFT*LFRPFSRSSKD
Trigger: GTCCTTGCTGGACCTGGAGAATGGACGGAACAGCCATGTGAACAAGAGAGCCAGGCTGCAGTCTCCTGCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp GTCCTTAGCACCTCATGCCGCTGCTGGAGTGCATGTTaGCTCCCAGTCGCCTTCTGCCTCACACTTCGGTAC +
Preference number: 6 (lower is better)
Translates to: VLSTSCRCWSAC*LPVAFCLTLRY
Trigger: GTACCGAAGTGTGAGGCAGAAGGCGACTGGGAGCAAACATGCACTCCAGCAGCGGCATGAGGTGCTAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp CTTTCCTTCCCCTGTGCCAGCTCTTCCTCCTTGCGTTaGATCTTCTCTTCCTGGGATGCCCGCTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: LSFPCASSSSLR*IFSSWDARSPS
Trigger: GGAAGGGGAGCGGGCATCCCAGGAAGAGAAGATCAAACGCAAGGAGGAAGAGCTGGCACAGGGGAAGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp GCTTCTAGCCGGGTCACCTCTGAATCCAGCTCCCTCTaGCTCTGGCTCTCCTCTTCCAGGCTCTTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: ASSRVTSESSSL*LWLSSSRLFLR
Trigger: CCTCAAGAAGAGCCTGGAAGAGGAGAGCCAGAGCAAGAGGGAGCTGGATTCAGAGGTGACCCGGCTAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TCCTGGGCTGCCTCTAGCAACCATACTAGTCGCTCATATTTCTGGTaGGTGTCTTCTACCCGGGTCTTCAGCAAGGGTGCGGTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: SWAASSNHTSRSYFW*VSSTRVFSKGAVPL
Trigger: CAGCGGCACCGCACCCTTGCTGAAGACCCGGGTAGAAGACACCAACCAGAAATATGAGCGACTAGTATGGTTGCTAGAGGCAGCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp GATAACTTGGCTTCTAGCCGGGTCACCTCTGAATCCAGCTCCCTCTaGCTCTGGCTCTCCTCTTCCAGGCTCTTCTTGAGGCGCTGGATC +
Preference number: 6 (lower is better)
Translates to: DNLASSRVTSESSSL*LWLSSSRLFLRRWI
Trigger: GATCCAGCGCCTCAAGAAGAGCCTGGAAGAGGAGAGCCAGAGCAAGAGGGAGCTGGATTCAGAGGTGACCCGGCTAGAAGCCAAGTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TGGCTATCCACCAGAGGAAGGTCAGTCCCAAAGCTCTaGCTGCTCAGCTTGTCCAGCTTCTCGTCCACCAGT +
Preference number: 6 (lower is better)
Translates to: WLSTRGRSVPKL*LLSLSSFSSTS
Trigger: ACTGGTGGACGAGAAGCTGGACAAGCTGAGCAGCCAGAGCTTTGGGACTGACCTTCCTCTGGTGGATAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GTGTCAGGGTCTATGACCACTATGGAGCGCCTCAGGTaGTTCTCCCTCTGCTCTCTCTTGACAGCCACAGAG +
Preference number: 6 (lower is better)
Translates to: VSGSMTTMERLR*FSLCSLLTATE
Trigger: CTCTGTGGCTGTCAAGAGAGAGCAGAGGGAGAACCACCTGAGGCGCTCCATAGTGGTCATAGACCCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TTGGCCAGGTGGGGCCCGATGGCTTTGACTTCATTGTGGAAGATGTaGTGTTGCTCCACCTGGCTATCCACCAGAGGAAGGTCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: LARWGPMALTSLWKM*CCSTWLSTRGRSVP
Trigger: TGGGACTGACCTTCCTCTGGTGGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCTGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TGCTCCTTGTCCTTGGCCAGGTGGGGCCCGATGGCTTTGACTTCATaGTGGAAGATGTTGTGTTGCTCCACCTGGCTATCCACCAGAGGA +
Preference number: 6 (lower is better)
Translates to: CSLSLARWGPMALTS*WKMLCCSTWLSTRG
Trigger: TCCTCTGGTGGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCTGGCCAAGGACAAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TCCTCTTCCTTCACTTTGGCAGCAGGAGACTGCAGCCTGGCTCTCTaGTTCACATGGCTGTTCCGTCCATTCTCCAGGTCCAGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: SSSFTLAAGDCSLAL*FTWLFRPFSRSSKD
Trigger: GTCCTTGCTGGACCTGGAGAATGGACGGAACAGCCATGTGAACAAGAGAGCCAGGCTGCAGTCTCCTGCTGCCAAAGTGAAGGAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp ATCTTTCTGAGAAGTTCTGTCTTCTCCCGCTGGCCAGAGCGTGCCTaGGCAGCCTCGTCCTCATACTGGCGGGTGAGGTCATTGACTTCT +
Preference number: 6 (lower is better)
Translates to: IFLRSSVFSRWPERA*AASSSYWRVRSLTS
Trigger: AGAAGTCAATGACCTCACCCGCCAGTATGAGGACGAGGCTGCCAAGGCACGCTCTGGCCAGCGGGAGAAGACAGAACTTCTCAGAAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp GCTCCTTGTCCTTGGCCAGGTGGGGCCCGATGGCTTTaGCTTCATTGTGGAAGATGTTGTGTTGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: APCPWPGGARWL*LHCGRCCVAPP
Trigger: AGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCTGGCCAAGGACAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp TTCACAAACATTTTCCAGTCGATAAGCCCAGCCCGGTaGGCCTCCTCTGGGGACAGCTCACGACCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: FTNIFQSISPAR*ASSGDSSRPVS
Trigger: TGACACAGGTCGTGAGCTGTCCCCAGAGGAGGCTCACCGGGCTGGGCTTATCGACTGGAAAATGTTTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp AGGGCCTGCACAAAGGCTTCACACTCGGCTGTGCACTaGGTCTTCTCTGGCTCAATCTGTAGCAGCTCATTG +
Preference number: 6 (lower is better)
Translates to: RACTKASHSAVH*VFSGSICSSSL
Trigger: CAATGAGCTGCTACAGATTGAGCCAGAGAAGACGCAGTGCACAGCCGAGTGTGAAGCCTTTGTGCAGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp GCAGCTTCCTCTTCCTTCACTTTGGCAGCAGGAGACTaGAGCCTGGCTCTCTTGTTCACATGGCTGTTCCGT +
Preference number: 6 (lower is better)
Translates to: AASSSFTLAAGD*SLALLFTWLFR
Trigger: ACGGAACAGCCATGTGAACAAGAGAGCCAGGCTGCAGTCTCCTGCTGCCAAAGTGAAGGAAGAGGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GGCTGTCTGTCTCCTGGGGCTCATAACTGGGAGTCTTaGCCAAAAACTGGAGCACACGGTTGTAACCACTGC +
Preference number: 6 (lower is better)
Translates to: GCLSPGAHNWES*PKTGAHGCNHC
Trigger: GCAGTGGTTACAACCGTGTGCTCCAGTTTTTGGCCAAGACTCCCAGTTATGAGCCCCAGGAGACAGACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CAGGATCTCCTGGACTACCTCTCTAGTCTGCACCTGTaGCTTGGTGTCCTTAAGGGCCTGGATCTCCTGCTT +
Preference number: 6 (lower is better)
Translates to: QDLLDYLSSLHL*LGVLKGLDLLL
Trigger: AAGCAGGAGATCCAGGCCCTTAAGGACACCAAGCCACAGGTGCAGACTAGAGAGGTAGTCCAGGAGATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TTGGTTTGGGGGTCTTCCTGGAACTGCAGGATCTCCTaGACTACCTCTCTAGTCTGCACCTGTGGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LVWGSSWNCRIS*TTSLVCTCGLV
Trigger: CACCAAGCCACAGGTGCAGACTAGAGAGGTAGTCCAGGAGATCCTGCAGTTCCAGGAAGACCCCCAAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp TGCTCCTTGTCCTTGGCCAGGTGGGGCCCGATGGCTTaGACTTCATTGTGGAAGATGTTGTGTTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: CSLSLARWGPMA*TSLWKMLCCST
Trigger: GGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCTGGCCAAGGACAAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp TTCACTTTGGCAGCAGGAGACTGCAGCCTGGCTCTCTaGTTCACATGGCTGTTCCGTCCATTCTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: FTLAAGDCSLAL*FTWLFRPFSRS
Trigger: GGACCTGGAGAATGGACGGAACAGCCATGTGAACAAGAGAGCCAGGCTGCAGTCTCCTGCTGCCAAAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp ATCTCCTGGACTACCTCTCTAGTCTGCACCTGTGGCTaGGTGTCCTTAAGGGCCTGGATCTCCTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: ISWTTSLVCTCG*VSLRAWISCFS
Trigger: GCTGAAGCAGGAGATCCAGGCCCTTAAGGACACCAAGCCACAGGTGCAGACTAGAGAGGTAGTCCAGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp CAGGTGGGGCCCGATGGCTTTGACTTCATTGTGGAAGATGTTGTGTaGCTCCACCTGGCTATCCACCAGAGGAAGGTCAGTCCCAAAGCT +
Preference number: 6 (lower is better)
Translates to: QVGPDGFDFIVEDVV*LHLAIHQRKVSPKA
Trigger: AGCTTTGGGACTGACCTTCCTCTGGTGGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TCACTGTTCTGCTCCTTGTCCTTGGCCAGGTGGGGCCCGATGGCTTaGACTTCATTGTGGAAGATGTTGTGTTGCTCCACCTGGCTATCC +
Preference number: 6 (lower is better)
Translates to: SLFCSLSLARWGPMA*TSLWKMLCCSTWLS
Trigger: GGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCTGGCCAAGGACAAGGAGCAGAACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp TCGGCTGTGCACTGCGTCTTCTCTGGCTCAATCTGTAGCAGCTCATaGGTAATGTTCTTGAGACCCTTGGCCCGCTCCGCACTATCCTCA +
Preference number: 6 (lower is better)
Translates to: SAVHCVFSGSICSSS*VMFLRPLARSALSS
Trigger: TGAGGATAGTGCGGAGCGGGCCAAGGGTCTCAAGAACATTACCAATGAGCTGCTACAGATTGAGCCAGAGAAGACGCAGTGCACAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp CCAGCTCCTGCCTCTTGCTGTCCAACACATGACCACTTTCAGGCATaGTGTCGTCCTGAATCAGCCTGTTCTCGTATGAGGCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: PAPASCCPTHDHFQA*CRPESACSRMRPAA
Trigger: AGCTGCTGGCCTCATACGAGAACAGGCTGATTCAGGACGACACAATGCCTGAAAGTGGTCATGTGTTGGACAGCAAGAGGCAGGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp ATAGTCCTTCACCGCTTGCTGGTACTGCTGGGAATCTaGATAGACCTTCTGCACCTCCTGTTCCCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: IVLHRLLVLLGI*IDLLHLLFPAC
Trigger: GCAAGCAGGGAACAGGAGGTGCAGAAGGTCTATGCAGATTCCCAGCAGTACCAGCAAGCGGTGAAGGACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCTGCTCGGCGATGCTGTAACCGCCGTAGCTCCACATaGAGTTTATCAATCTGCCGCAGCTCAGCATCAATG +
Preference number: 6 (lower is better)
Translates to: SARRCCNRRSST*SLSICRSSASM
Trigger: CATTGATGCTGAGCTGCGGCAGATTGATAAACTGCATGTGGAGCTACGGCGGTTACAGCATCGCCGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TGGAGTTCACTGTTCTGCTCCTTGTCCTTGGCCAGGTaGGGCCCGATGGCTTTGACTTCATTGTGGAAGATG +
Preference number: 6 (lower is better)
Translates to: WSSLFCSLSLAR*GPMALTSLWKM
Trigger: CATCTTCCACAATGAAGTCAAAGCCATCGGGCCCCACCTGGCCAAGGACAAGGAGCAGAACAGTGAACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp TTGTTGATTCTTTCTTCTTTGGCCTCCAGGTTCCGGTaGATGAAATTCTCGTACTGGCGGCGGCGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LLILSSLASRFR*MKFSYWRRRLG
Trigger: CCCCAGCCGCCGCCGCCAGTACGAGAATTTCATCAACCGGAACCTGGAGGCCAAAGAAGAAAGAATCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp CACTGCGTCTTCTCTGGCTCAATCTGTAGCAGCTCATaGGTAATGTTCTTGAGACCCTTGGCCCGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: HCVFSGSICSSS*VMFLRPLARSA
Trigger: TGCGGAGCGGGCCAAGGGTCTCAAGAACATTACCAATGAGCTGCTACAGATTGAGCCAGAGAAGACGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp AACTTGGCAGCAAGAGCAGCTTCCTCTTCCTTCACTTaGGCAGCAGGAGACTGCAGCCTGGCTCTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: NLAARAASSSFT*AAGDCSLALLF
Trigger: GAACAAGAGAGCCAGGCTGCAGTCTCCTGCTGCCAAAGTGAAGGAAGAGGAAGCTGCTCTTGCTGCCAAGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp GCTCTGGCTCTCCTCTTCCAGGCTCTTCTTGAGGCGCTGGATCTCTaGCTCAGTGTCACCTTTTTCTACCTGGACACTCTCAGAGAAGAC +
Preference number: 6 (lower is better)
Translates to: ALALLFQALLEALDL*LSVTFFYLDTLRED
Trigger: GTCTTCTCTGAGAGTGTCCAGGTAGAAAAAGGTGACACTGAGCAAGAGATCCAGCGCCTCAAGAAGAGCCTGGAAGAGGAGAGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp TGCTGCTGCCGTGCCTGTGATGCTGTCAGCAACTTCTaGTACTTGGCTTGGAGTTCACTGTTCTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: CCCRACDAVSNF*YLAWSSLFCSL
Trigger: CAAGGAGCAGAACAGTGAACTCCAAGCCAAGTATCAGAAGTTGCTGACAGCATCACAGGCACGGCAGCAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp GCTGCTCAATCAGATCTGAGAGTTCCTTGTTGGAGATaGTCCGCGTCTGCACCGTTGGGCTGTATTTGCCTT +
Preference number: 6 (lower is better)
Translates to: AAQSDLRVPCWR*SASAPLGCICL
Trigger: AAGGCAAATACAGCCCAACGGTGCAGACGCGGAGCATCTCCAACAAGGAACTCTCAGATCTGATTGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp GACACTCTCAGAGAAGACCACCTTTTCTTTGATCTCTaGCTTCTCCAGGGCAGCCAACTTTCTACGCAGCGG +
Preference number: 6 (lower is better)
Translates to: DTLREDHLFFDL*LLQGSQLSTQR
Trigger: CCGCTGCGTAGAAAGTTGGCTGCCCTGGAGAAGGCAGAGATCAAAGAAAAGGTGGTCTTCTCTGAGAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CCTCTAGCAACCATACTAGTCGCTCATATTTCTGGTTaGTGTCTTCTACCCGGGTCTTCAGCAAGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: PLATILVAHISG*CLLPGSSARVR
Trigger: CCGCACCCTTGCTGAAGACCCGGGTAGAAGACACCAACCAGAAATATGAGCGACTAGTATGGTTGCTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp ATGCCAGAGCTTAGCTTTCCCCCTTGTAGGGTCTCATaGGTCACTCCTGCTTCTGGTTGCTGTCTCAAGAGA +
Preference number: 6 (lower is better)
Translates to: MPELSFPPCRVS*VTPASGCCLKR
Trigger: TCTCTTGAGACAGCAACCAGAAGCAGGAGTGACCCATGAGACCCTACAAGGGGGAAAGCTAAGCTCTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TCTCGAGTTTCTGTTGCTGCCATCTCAATCTCTGATTaGAGTCTCCGGGTCTCTAGCTGCAGGTTTTGCCGC +
Preference number: 6 (lower is better)
Translates to: SRVSVAAISISD*SLRVSSCRFCR
Trigger: GCGGCAAAACCTGCAGCTAGAGACCCGGAGACTCCAATCAGAGATTGAGATGGCAGCAACAGAAACTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp TTCTGCAGCTGCTCAATCAGATCTGAGAGTTCCTTGTaGGAGATGCTCCGCGTCTGCACCGTTGGGCTGTAT +
Preference number: 6 (lower is better)
Translates to: FCSCSIRSESSL*EMLRVCTVGLY
Trigger: ATACAGCCCAACGGTGCAGACGCGGAGCATCTCCAACAAGGAACTCTCAGATCTGATTGAGCAGCTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp GCCTCTAGCAACCATACTAGTCGCTCATATTTCTGGTaGGTGTCTTCTACCCGGGTCTTCAGCAAGGGTGCG +
Preference number: 6 (lower is better)
Translates to: ASSNHTSRSYFW*VSSTRVFSKGA
Trigger: CGCACCCTTGCTGAAGACCCGGGTAGAAGACACCAACCAGAAATATGAGCGACTAGTATGGTTGCTAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp CCCAGGCGCCTCTGTAGTTCATCGATCTCCAGATCCTaGTCCTTGGACATCTTCTTGAGGTCATCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: PRRLCSSSISRS*SLDIFLRSSSS
Trigger: GGAACTGGATGACCTCAAGAAGATGTCCAAGGACAAGGATCTGGAGATCGATGAACTACAGAGGCGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp GTGTGCCTCAATGGAGTTCCTCCCTGGGTGCTCAGCTGTCAGCAGTaGGTCACCTTCAGTGTGCAGTTTGTTGATTCTTTCTTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: VCLNGVPPWVLSCQQ*VTFSVQFVDSFFFG
Trigger: GCCAAAGAAGAAAGAATCAACAAACTGCACACTGAAGGTGACCAACTGCTGACAGCTGAGCACCCAGGGAGGAACTCCATTGAGGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp AGTCTCCGGGTCTCTAGCTGCAGGTTTTGCCGCTCTAGCTGTAGCTaGTGGTTTTCTTCTCTCAGGAAGTCCAGTTCCTTGGATGACTTG +
Preference number: 6 (lower is better)
Translates to: SLRVSSCRFCRSSCS*WFSSLRKSSSLDDL
Trigger: CAAGTCATCCAAGGAACTGGACTTCCTGAGAGAAGAAAACCACAAGCTACAGCTAGAGCGGCAAAACCTGCAGCTAGAGACCCGGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp GATCCTTCAGGGTCTGGATTTCCTCCTGGGCACTCTTaGCCTCATTTTCCAGCTGTTGCCTTCGCTCTATCT +
Preference number: 6 (lower is better)
Translates to: DPSGSGFPPGHS*PHFPAVAFALS
Trigger: AGATAGAGCGAAGGCAACAGCTGGAAAATGAGGTCAAGAGTGCCCAGGAGGAAATCCAGACCCTGAAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp CATCGATCTCCAGATCCTTGTCCTTGGACATCTTCTTaGGGTCATCCAGTTCCTTCTCTAGGGACCACAGCC +
Preference number: 6 (lower is better)
Translates to: HRSPDPCPWTSS*GHPVPSLGTTA
Trigger: GGCTGTGGTCCCTAGAGAAGGAACTGGATGACCTCAAGAAGATGTCCAAGGACAAGGATCTGGAGATCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp CCAAGACTGCCAGCTCCTGAATGGACATATCCTTGTTaGCATAGCGGTCATATTGAGCAGCGGTTAGCCTGC +
Preference number: 6 (lower is better)
Translates to: PRLPAPEWTYPC*HSGHIEQRLAC
Trigger: GCAGGCTAACCGCTGCTCAATATGACCGCTATGTCAACAAGGATATGTCCATTCAGGAGCTGGCAGTCTTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp CCGATGGCTTTGACTTCATTGTGGAAGATGTTGTGTTaGTCCACCTGGCTATCCACCAGAGGAAGGTCAGTC +
Preference number: 6 (lower is better)
Translates to: PMALTSLWKMLC*STWLSTRGRSV
Trigger: GACTGACCTTCCTCTGGTGGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAAAGCCATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCCTCCTGGGCACTCTTGACCTCATTTTCCAGCTGTTaGCTTCGCTCTATCTCCTCCTCCAGTTCCTTCTTA +
Preference number: 6 (lower is better)
Translates to: SSWALLTSFSSC*LRSISSSSSFL
Trigger: TAAGAAGGAACTGGAGGAGGAGATAGAGCGAAGGCAACAGCTGGAAAATGAGGTCAAGAGTGCCCAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCCTCTTCCAGGCTCTTCTTGAGGCGCTGGATCTCTTaGTCAGTGTCACCTTTTTCTACCTGGACACTCTCA +
Preference number: 6 (lower is better)
Translates to: SSSRLFLRRWIS*SVSPFSTWTLS
Trigger: TGAGAGTGTCCAGGTAGAAAAAGGTGACACTGAGCAAGAGATCCAGCGCCTCAAGAAGAGCCTGGAAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TCTGATTGGAGTCTCCGGGTCTCTAGCTGCAGGTTTTaGCGCTCTAGCTGTAGCTTGTGGTTTTCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: SDWSLRVSSCRF*RSSCSLWFSSL
Trigger: GAGAGAAGAAAACCACAAGCTACAGCTAGAGCGGCAAAACCTGCAGCTAGAGACCCGGAGACTCCAATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp GCTGTTTGTGAAGGCAGTCACCTCAGCTCGCAAATCTaGCTCATCTTCATACTGTACTACCTCCTGGCGTAC +
Preference number: 6 (lower is better)
Translates to: AVCEGSHLSSQI*LIFILYYLLAY
Trigger: GTACGCCAGGAGGTAGTACAGTATGAAGATGAGCCAGATTTGCGAGCTGAGGTGACTGCCTTCACAAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp GCCTCTTGCTGTCCAACACATGACCACTTTCAGGCATaGTGTCGTCCTGAATCAGCCTGTTCTCGTATGAGG +
Preference number: 6 (lower is better)
Translates to: ASCCPTHDHFQA*CRPESACSRMR
Trigger: CCTCATACGAGAACAGGCTGATTCAGGACGACACAATGCCTGAAAGTGGTCATGTGTTGGACAGCAAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp AGCAGTTGGTCACCTTCAGTGTGCAGTTTGTTGATTCTTTCTTCTTaGGCCTCCAGGTTCCGGTTGATGAAATTCTCGTACTGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: SSWSPSVCSLLILSS*ASRFRLMKFSYWRR
Trigger: CCGCCGCCAGTACGAGAATTTCATCAACCGGAACCTGGAGGCCAAAGAAGAAAGAATCAACAAACTGCACACTGAAGGTGACCAACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp CCTGGGTGCTCAGCTGTCAGCAGTTGGTCACCTTCAGTGTGCAGTTaGTTGATTCTTTCTTCTTTGGCCTCCAGGTTCCGGTTGATGAAA +
Preference number: 6 (lower is better)
Translates to: PGCSAVSSWSPSVCS*LILSSLASRFRLMK
Trigger: TTTCATCAACCGGAACCTGGAGGCCAAAGAAGAAAGAATCAACAAACTGCACACTGAAGGTGACCAACTGCTGACAGCTGAGCACCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp GTCTCTGGGTCAGTTGTATATTTAATGACCTCTTTGGTCACCTCTTaGACTTCTACCTGTGGTCCACGGTTCCGTAGGGCCTCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: VSGSVVYLMTSLVTS*TSTCGPRFRRASSS
Trigger: TGAGCTGGAGGCCCTACGGAACCGTGGACCACAGGTAGAAGTCAAAGAGGTGACCAAAGAGGTCATTAAATATACAACTGACCCAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp TATCAATCTGCCGCAGCTCAGCATCAATGCTGTTTGTaGAGGCAGTCACCTCAGCTCGCAAATCTGGCTCAT +
Preference number: 6 (lower is better)
Translates to: YQSAAAQHQCCL*RQSPQLANLAH
Trigger: ATGAGCCAGATTTGCGAGCTGAGGTGACTGCCTTCACAAACAGCATTGATGCTGAGCTGCGGCAGATTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp AGATCTGAGAGTTCCTTGTTGGAGATGCTCCGCGTCTaGACCGTTGGGCTGTATTTGCCTTTGTTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: RSESSLLEMLRV*TVGLYLPLFLF
Trigger: GAAGAGAAACAAAGGCAAATACAGCCCAACGGTGCAGACGCGGAGCATCTCCAACAAGGAACTCTCAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TACCTTGAGCACCTCTTTGACAGTGATCTTGCCTTCTaGCATGGCTCGTTCTTTCTCCAGTCTCCTGAGCTT +
Preference number: 6 (lower is better)
Translates to: YLEHLFDSDLAF*HGSFFLQSPEL
Trigger: AAGCTCAGGAGACTGGAGAAAGAACGAGCCATGGCAGAAGGCAAGATCACTGTCAAAGAGGTGCTCAAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TTGACTTCATTGTGGAAGATGTTGTGTTGCTCCACCTaGCTATCCACCAGAGGAAGGTCAGTCCCAAAGCTC +
Preference number: 6 (lower is better)
Translates to: LTSLWKMLCCST*LSTRGRSVPKL
Trigger: GAGCTTTGGGACTGACCTTCCTCTGGTGGATAGCCAGGTGGAGCAACACAACATCTTCCACAATGAAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp CAGCGGTTAGCCTGCCACTCTGAAGAGCGTCCTCAATaGAGAACTTCTTGCCTGACTTCCTGTCATGAATTA +
Preference number: 6 (lower is better)
Translates to: QRLACHSEERPQ*RTSCLTSCHEL
Trigger: TAATTCATGACAGGAAGTCAGGCAAGAAGTTCTCCATTGAGGACGCTCTTCAGAGTGGCAGGCTAACCGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp GTCTCTAGCTGCAGGTTTTGCCGCTCTAGCTGTAGCTaGTGGTTTTCTTCTCTCAGGAAGTCCAGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: VSSCRFCRSSCS*WFSSLRKSSSL
Trigger: CAAGGAACTGGACTTCCTGAGAGAAGAAAACCACAAGCTACAGCTAGAGCGGCAAAACCTGCAGCTAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp GGGTGCTCAGCTGTCAGCAGTTGGTCACCTTCAGTGTGCAGTTTGTaGATTCTTTCTTCTTTGGCCTCCAGGTTCCGGTTGATGAAATTC +
Preference number: 6 (lower is better)
Translates to: GCSAVSSWSPSVCSL*ILSSLASRFRLMKF
Trigger: GAATTTCATCAACCGGAACCTGGAGGCCAAAGAAGAAAGAATCAACAAACTGCACACTGAAGGTGACCAACTGCTGACAGCTGAGCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp AGTCTTCCATGTATTTCAGATGGCTCTCCTCACAGATaGGCAGGTTCAGGTACTCCTTCCACTCAGCATGCA +
Preference number: 6 (lower is better)
Translates to: SLPCISDGSPHR*AGSGTPSTQHA
Trigger: TGCATGCTGAGTGGAAGGAGTACCTGAACCTGCTCATCTGTGAGGAGAGCCATCTGAAATACATGGAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp TCCTGGTCATCCAGTTCCCGAAGCAACAGCTCTATCTaGTACCGGTCTTTGAAGTCAGGGCTATATTTCTGG +
Preference number: 6 (lower is better)
Translates to: SWSSSSRSNSSI*YRSLKSGLYFW
Trigger: CCAGAAATATAGCCCTGACTTCAAAGACCGGTATCAGATAGAGCTGTTGCTTCGGGAACTGGATGACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp TGCCACTCTGAAGAGCGTCCTCAATGGAGAACTTCTTaGCTGACTTCCTGTCATGAATTACTGATGACTCCC +
Preference number: 6 (lower is better)
Translates to: CHSEERPQWRTS*LTSCHELLMTP
Trigger: GGGAGTCATCAGTAATTCATGACAGGAAGTCAGGCAAGAAGTTCTCCATTGAGGACGCTCTTCAGAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp TCTAGCTGCAGGTTTTGCCGCTCTAGCTGTAGCTTGTaGTTTTCTTCTCTCAGGAAGTCCAGTTCCTTGGAT +
Preference number: 6 (lower is better)
Translates to: SSCRFCRSSCSL*FSSLRKSSSLD
Trigger: ATCCAAGGAACTGGACTTCCTGAGAGAAGAAAACCACAAGCTACAGCTAGAGCGGCAAAACCTGCAGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CCA 72 bp AGTTCCTTCTCTAGGGACCACAGCCTAGAGTTTAGGTaGGTCCCAGAGTCTATCGTGGTTATGTTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: SSFSRDHSLEFR*VPESIVVMFFR
Trigger: TCTGAAGAACATAACCACGATAGACTCTGGGACCCACCTAAACTCTAGGCTGTGGTCCCTAGAGAAGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp AGCCTCTGTCTGTTGATGGCATTAACCTCTGTGAACTaGGCAGCAAGAGCAGCTTCCTCTTCCTTCACTTTG +
Preference number: 6 (lower is better)
Translates to: SLCLLMALTSVN*AARAASSSFTL
Trigger: CAAAGTGAAGGAAGAGGAAGCTGCTCTTGCTGCCAAGTTCACAGAGGTTAATGCCATCAACAGACAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp AAATTCTGTAGCCTCTGTCTGTTGATGGCATTAACCTCTGTGAACTaGGCAGCAAGAGCAGCTTCCTCTTCCTTCACTTTGGCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: KFCSLCLLMALTSVN*AARAASSSFTLAAG
Trigger: TCCTGCTGCCAAAGTGAAGGAAGAGGAAGCTGCTCTTGCTGCCAAGTTCACAGAGGTTAATGCCATCAACAGACAGAGGCTACAGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp AGTTCCTGCTCTGTCTCTGGGTCAGTTGTATATTTAATGACCTCTTaGGTCACCTCTTTGACTTCTACCTGTGGTCCACGGTTCCGTAGG +
Preference number: 6 (lower is better)
Translates to: SSCSVSGSVVYLMTS*VTSLTSTCGPRFRR
Trigger: CCTACGGAACCGTGGACCACAGGTAGAAGTCAAAGAGGTGACCAAAGAGGTCATTAAATATACAACTGACCCAGAGACAGAGCAGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 90 bp CTCAAGAGATTCAGTGCAAACTCCAAATTCTGTAGCCTCTGTCTGTaGATGGCATTAACCTCTGTGAACTTGGCAGCAAGAGCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: LKRFSANSKFCSLCL*MALTSVNLAARAAS
Trigger: GGAAGCTGCTCTTGCTGCCAAGTTCACAGAGGTTAATGCCATCAACAGACAGAGGCTACAGAATTTGGAGTTTGCACTGAATCTCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS GCA 72 bp ATGTTCCTTTCCACCTGGTCTGCATTCTTCTGCAGCTaGTCAATCAGATCTGAGAGTTCCTTGTTGGAGATG +
Preference number: 6 (lower is better)
Translates to: MFLSTWSAFFCS*SIRSESSLLEM
Trigger: CATCTCCAACAAGGAACTCTCAGATCTGATTGAGCAGCTGCAGAAGAATGCAGACCAGGTGGAAAGGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp TCAGTTGTATATTTAATGACCTCTTTGGTCACCTCTTaGACTTCTACCTGTGGTCCACGGTTCCGTAGGGCC +
Preference number: 6 (lower is better)
Translates to: SVVYLMTSLVTS*TSTCGPRFRRA
Trigger: GGCCCTACGGAACCGTGGACCACAGGTAGAAGTCAAAGAGGTGACCAAAGAGGTCATTAAATATACAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp GTTCCCGAAGCAACAGCTCTATCTGATACCGGTCTTTaGAGTCAGGGCTATATTTCTGGTTCAAGTCTGAGT +
Preference number: 6 (lower is better)
Translates to: VPEATALSDTGL*SQGYISGSSLS
Trigger: ACTCAGACTTGAACCAGAAATATAGCCCTGACTTCAAAGACCGGTATCAGATAGAGCTGTTGCTTCGGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS TCA 72 bp TCCTCAATGGAGAACTTCTTGCCTGACTTCCTGTCATaGATTACTGATGACTCCCCATTAGGACCTTTCACT +
Preference number: 6 (lower is better)
Translates to: SSMENFLPDFLS*ITDDSPLGPFT
Trigger: AGTGAAAGGTCCTAATGGGGAGTCATCAGTAATTCATGACAGGAAGTCAGGCAAGAAGTTCTCCATTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp TCACCTTCAGTGTGCAGTTTGTTGATTCTTTCTTCTTaGGCCTCCAGGTTCCGGTTGATGAAATTCTCGTAC +
Preference number: 6 (lower is better)
Translates to: SPSVCSLLILSS*ASRFRLMKFSY
Trigger: GTACGAGAATTTCATCAACCGGAACCTGGAGGCCAAAGAAGAAAGAATCAACAAACTGCACACTGAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5
CDS CAA 72 bp TTCAGTGCAAACTCCAAATTCTGTAGCCTCTGTCTGTaGATGGCATTAACCTCTGTGAACTTGGCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: FSANSKFCSLCL*MALTSVNLAAR
Trigger: TCTTGCTGCCAAGTTCACAGAGGTTAATGCCATCAACAGACAGAGGCTACAGAATTTGGAGTTTGCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035672.5