Pregenerated sensors for PPIL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078451Ensembl transcript IDs: ENSMUST00000105507.5, ENSMUST00000214145.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGAAAGCTGGAGCTTTTaGAGAGCCCCACCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVESWSF*RAPPPS Trigger: TGAAGGTGGTGGGGCTCTTCAAAAGCTCCAGCTTTC...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS-3UTR TCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTATGTGATGGCCCTTATTaGCCATTCCAAGAACTCCCC | + |
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Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVCDGPY*PFQELP Trigger: GGGGAGTTCTTGGAATGGTCAATAAGGGCCATCACA...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR TCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTATCCCAAGCAAACTCTTaGAGAGGAACTATCACCGGA | + |
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Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVSQANS*RGTITG Trigger: TCCGGTGATAGTTCCTCTTCAAGAGTTTGCTTGGGA...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS-3UTR TCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGTGTGATGGCCCTTATTaGCCATTCCAAGAACTCCCC | + |
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Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVCDGPY*PFQELP Trigger: GGGGAGTTCTTGGAATGGTCAATAAGGGCCATCACA...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR TCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGAGCTGCCTGTAGTGTaGTGTAGAATTGTGACCCAT | + |
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Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVELPVV*CRIVTH Trigger: ATGGGTCACAATTCTACATCACACTACAGGCAGCTC...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR CCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTACTTTTAAGAACTTCGTaGCATAGTCCAGAGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVLLRTS*HSPESA Trigger: CGCTGACTCTGGACTATGCCACGAAGTTCTTAAAAG...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS-3UTR TCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGATGGTCTTTGACACCTaGAAGCTGGAGCTTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVMVFDT*KLELLK Trigger: CTTCAAAAGCTCCAGCTTTCAGGTGTCAAAGACCAT...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS-3UTR GCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTAATCCTGACGTTCCTGTaGACAAGACCTGAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVILTFL*TRPENL Trigger: CAAATTTTCAGGTCTTGTGCACAGGAACGTCAGGAT...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR CCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGTCAAAGTCTCAGCGATaGTCTTTGACACCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVSKSQR*SLTPES Trigger: GCTTTCAGGTGTCAAAGACCATCGCTGAGACTTTGA...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS-3UTR CCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTAACTGCAAAGAAGCAATaGTCTTTCGTTCTCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVTAKKQ*SFVLCW Trigger: CCAACAGAGAACGAAAGACCATTGCTTCTTTGCAGT...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR TCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGCCTGTGCACAAGACCTaGAAATTTGTACATGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVPVHKT*KFVHVL Trigger: CAGAACATGTACAAATTTTCAGGTCTTGTGCACAGG...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR TCA 90 bp | AAATATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGATCTCTCAGAAAATCCTaGCGTTCCTGTGCACAAGAC | + |
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Preference number: 4 (lower is better) Translates to: KYKTADQMHSNKAPQKMRSLRKS*RSCAQD Trigger: GTCTTGTGCACAGGAACGTCAGGATTTTCTGAGAGA...TCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR TCA 90 bp | AAATATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGAGCTGCCTGTAGTGTaGTGTAGAATTGTGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KYKTADQMHSNKAPQKMRELPVV*CRIVTH Trigger: ATGGGTCACAATTCTACATCACACTACAGGCAGCTC...TCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGCTTCTTCAGATCAAATaGGTTACCCAGGAGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVLLQIK*VTQELI Trigger: GATCAACTCCTGGGTAACGCATTTGATCTGAAGAAG...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS-3UTR GCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGATCCTGACGTTCCTGTaGACAAGACCTGAAAATTTG | + |
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Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVILTFL*TRPENL Trigger: CAAATTTTCAGGTCTTGTGCACAGGAACGTCAGGAT...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTAAAGAACTCCACTGTCTaGAATACTGCAAAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVKNSTV*NTAKKQ Trigger: TTGCTTCTTTGCAGTATTGCAGACAGTGGAGTTCTT...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGTGTAATGAAGCTTTGTaGCTCTCTCAGAAAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVCNEAL*LSQKIL Trigger: CAGGATTTTCTGAGAGAGGCACAAAGCTTCATTACA...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTAGTTCCTTCGATTAGTTaGCCAAAAGCCACATATTTT | + |
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Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVVPSIS*PKATYF Trigger: AAAATATGTGGCTTTTGGGCAACTAATCGAAGGAAC...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGCACTGTCTGCAATACTaGAAAGAAGCAATGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVHCLQY*KEAMVF Trigger: AAAGACCATTGCTTCTTTGCAGTATTGCAGACAGTG...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGAAGAACTCCACTGTCTaGAATACTGCAAAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVKNSTV*NTAKKQ Trigger: TTGCTTCTTTGCAGTATTGCAGACAGTGGAGTTCTT...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTTCCTTCGATTAGTTaGCCAAAAGCCACATATTTT | + |
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Preference number: 4 (lower is better) Translates to: YKTADQMHSNKAPQKMRVVPSIS*PKATYF Trigger: AAAATATGTGGCTTTTGGGCAACTAATCGAAGGAAC...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR CCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTAACACAAAATCATGCTTaGTGTCTTTTAAGAACTTCG | + |
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Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVTQNHA*CLLRTS Trigger: CGAAGTTCTTAAAAGACACCAAGCATGATTTTGTGT...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS-3UTR CCA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTAAATTTGTACATGTTCTaGGACATGCATCACAATACA | + |
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Preference number: 4 (lower is better) Translates to: KTADQMHSNKAPQKMRVVNLYMF*DMHHNT Trigger: TGTATTGTGATGCATGTCCCAGAACATGTACAAATT...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | AAATATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGATGTAATGAAGCTTTGTaGCTCTCTCAGAAAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: KYKTADQMHSNKAPQKMRCNEAL*LSQKIL Trigger: CAGGATTTTCTGAGAGAGGCACAAAGCTTCATTACA...TCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR GCA 90 bp | AAATATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGACACTGTCTGCAATACTaGAAAGAAGCAATGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KYKTADQMHSNKAPQKMRHCLQY*KEAMVF Trigger: AAAGACCATTGCTTCTTTGCAGTATTGCAGACAGTG...TCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS TCA 90 bp | CCCACCACCTTCAGCTTCAGGGGCGGCTCGGGCGGCAACCGCACGTaGCATGCTGGGGGCTTCGACTTGGGCCGGCACGGCTGCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: PTTFSFRGGSGGNRT*HAGGFDLGRHGCWV Trigger: CACCCAGCAGCCGTGCCGGCCCAAGTCGAAGCCCCCAGCATGTCACGTGCGGTTGCCGCCCGAGCCGCCCCTGAAGCTGAAGGTGGTGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS CCA 90 bp | TGTCCAAGTACACAAAATCATGCTTGGTGTCTTTTAAGAACTTCGTaGCATAGTCCAGAGTCAGCGCCTCATACAGAGCGGAGGGCCGGA | + |
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Preference number: 5 (lower is better) Translates to: CPSTQNHAWCLLRTS*HSPESAPHTERRAG Trigger: TCCGGCCCTCCGCTCTGTATGAGGCGCTGACTCTGGACTATGCCACGAAGTTCTTAAAAGACACCAAGCATGATTTTGTGTACTTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS CCA 90 bp | CTTGAAGAGGAACTATCACCGGATCTTCAAATCTGTACGGGTAGCTaGTTTTCAAAGTCTCAGCGATGGTCTTTGACACCTGAAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LEEELSPDLQICTGS*FSKSQRWSLTPESW Trigger: CCAGCTTTCAGGTGTCAAAGACCATCGCTGAGACTTTGAAAACCAGCTACCCGTACAGATTTGAAGATCCGGTGATAGTTCCTCTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS TCA 90 bp | TTTGTGCCTCTCTCAGAAAATCCTGACGTTCCTGTGCACAAGACCTaGAAATTTGTACATGTTCTGGGACATGCATCACAATACAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FVPLSENPDVPVHKT*KFVHVLGHASQYSS Trigger: TGAGCTGTATTGTGATGCATGTCCCAGAACATGTACAAATTTTCAGGTCTTGTGCACAGGAACGTCAGGATTTTCTGAGAGAGGCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS GCA 90 bp | TGTAATGAAGCTTTGTGCCTCTCTCAGAAAATCCTGACGTTCCTGTaGACAAGACCTGAAAATTTGTACATGTTCTGGGACATGCATCAC | + |
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Preference number: 5 (lower is better) Translates to: CNEALCLSQKILTFL*TRPENLYMFWDMHH Trigger: GTGATGCATGTCCCAGAACATGTACAAATTTTCAGGTCTTGTGCACAGGAACGTCAGGATTTTCTGAGAGAGGCACAAAGCTTCATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS GCA 90 bp | CAAAGAAGCAATGGTCTTTCGTTCTCTGTTGGGACTAATTCTAGTTaGTTAAGAACGTGGGTTCCTTCGATTAGTTGCCCAAAAGCCACA | + |
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Preference number: 5 (lower is better) Translates to: QRSNGLSFSVGTNSS*LRTWVPSISCPKAT Trigger: TGTGGCTTTTGGGCAACTAATCGAAGGAACCCACGTTCTTAAGCAACTAGAATTAGTCCCAACAGAGAACGAAAGACCATTGCTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR CAA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGATCCCAAGCAAACTCTaGAAGAGGAACTATCACCGG | + |
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Preference number: 5 (lower is better) Translates to: YKTADQMHSNKAPQKMRVIPSKL*KRNYHR Trigger: CCGGTGATAGTTCCTCTTCAAGAGTTTGCTTGGGAT...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS TCA 90 bp | AATCGAATCTTTGTAATGAAGCTTTGTGCCTCTCTCAGAAAATCCTaGCGTTCCTGTGCACAAGACCTGAAAATTTGTACATGTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: NRIFVMKLCASLRKS*RSCAQDLKICTCSG Trigger: CCCAGAACATGTACAAATTTTCAGGTCTTGTGCACAGGAACGTCAGGATTTTCTGAGAGAGGCACAAAGCTTCATTACAAAGATTCGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS GCA 90 bp | TCTGAACTACTCGATGAAAAATCGAATCTTTGTAATGAAGCTTTGTaGCTCTCTCAGAAAATCCTGACGTTCCTGTGCACAAGACCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SELLDEKSNLCNEAL*LSQKILTFLCTRPE Trigger: TTCAGGTCTTGTGCACAGGAACGTCAGGATTTTCTGAGAGAGGCACAAAGCTTCATTACAAAGATTCGATTTTTCATCGAGTAGTTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS CCA 90 bp | TTGGAGAAAGATCAATACAAATGTCCAAGTACACAAAATCATGCTTaGTGTCTTTTAAGAACTTCGTGGCATAGTCCAGAGTCAGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: LEKDQYKCPSTQNHA*CLLRTSWHSPESAP Trigger: AGGCGCTGACTCTGGACTATGCCACGAAGTTCTTAAAAGACACCAAGCATGATTTTGTGTACTTGGACATTTGTATTGATCTTTCTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS-3UTR CAA 90 bp | AAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGGTAACAAGACCTGAAAATTaGTACATGTTCTGGGACATG | + |
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Preference number: 5 (lower is better) Translates to: KTADQMHSNKAPQKMRVVTRPEN*YMFWDM Trigger: CATGTCCCAGAACATGTACAAATTTTCAGGTCTTGT...TACCACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR CAA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGACAAGACCTGAAAATTaGTACATGTTCTGGGACATG | + |
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Preference number: 5 (lower is better) Translates to: YKTADQMHSNKAPQKMRVTRPEN*YMFWDM Trigger: CATGTCCCAGAACATGTACAAATTTTCAGGTCTTGT...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR CAA 90 bp | TATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTGCTTTGTAATGAAGCTTaGTGCCTCTCTCAGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: YKTADQMHSNKAPQKMRVLCNEA*CLSQKI Trigger: GATTTTCTGAGAGAGGCACAAAGCTTCATTACAAAG...CACTCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS-3UTR CAA 90 bp | AAATATAAAACAGCTGATCAAATGCACAGCAATAAGGCACCACAGAAAATGAGAGTCTTTCGTTCTCTGTaGGGACTAATTCTAGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: KYKTADQMHSNKAPQKMRVFRSL*GLILVA Trigger: AGCAACTAGAATTAGTCCCAACAGAGAACGAAAGAC...TCTCATTTTCTGTGGTGCCTTATTGCTGTGCATTTGATCAGCTGTTTTATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS CCA 72 bp | ACACAAAATCATGCTTGGTGTCTTTTAAGAACTTCGTaGCATAGTCCAGAGTCAGCGCCTCATACAGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: TQNHAWCLLRTS*HSPESAPHTER Trigger: CCGCTCTGTATGAGGCGCTGACTCTGGACTATGCCACGAAGTTCTTAAAAGACACCAAGCATGATTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS CAA 72 bp | TCCGTCGTCTCCGCGCCCCTGTACTATATCTCCTCCTaGTATCCAACCATTCTGAACTACTCGATGAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SVVSAPLYYISS*YPTILNYSMKN Trigger: ATTTTTCATCGAGTAGTTCAGAATGGTTGGATACAAGGAGGAGATATAGTACAGGGGCGCGGAGACGACGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS CAA 90 bp | AATAGACTCTCCGTCGTCTCCGCGCCCCTGTACTATATCTCCTCCTaGTATCCAACCATTCTGAACTACTCGATGAAAAATCGAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: NRLSVVSAPLYYISS*YPTILNYSMKNRIF Trigger: AAAGATTCGATTTTTCATCGAGTAGTTCAGAATGGTTGGATACAAGGAGGAGATATAGTACAGGGGCGCGGAGACGACGGAGAGTCTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS GCA 72 bp | AATGGTCTTTCGTTCTCTGTTGGGACTAATTCTAGTTaGTTAAGAACGTGGGTTCCTTCGATTAGTTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: NGLSFSVGTNSS*LRTWVPSISCP Trigger: TGGGCAACTAATCGAAGGAACCCACGTTCTTAAGCAACTAGAATTAGTCCCAACAGAGAACGAAAGACCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS TCA 72 bp | CCCTTATTGACCATTCCAAGAACTCCCCTCTTATTGTaGGGAATCGAGAAGTTTTCATCTTCAAACGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: PLLTIPRTPLLL*GIEKFSSSNVG Trigger: ACCAACGTTTGAAGATGAAAACTTCTCGATTCCTCACAATAAGAGGGGAGTTCTTGGAATGGTCAATAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS CCA 72 bp | TTCTCTGTTGGGACTAATTCTAGTTGCTTAAGAACGTaGGTTCCTTCGATTAGTTGCCCAAAAGCCACATAT | + |
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Preference number: 6 (lower is better) Translates to: FSVGTNSSCLRT*VPSISCPKATY Trigger: ATATGTGGCTTTTGGGCAACTAATCGAAGGAACCCACGTTCTTAAGCAACTAGAATTAGTCCCAACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS CAA 72 bp | GGCCCACTTCTTCAGATCAAATGCGTTACCCAGGAGTaGATCATTAACAAAACACATCACATAGGAGGAATA | + |
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Preference number: 6 (lower is better) Translates to: GPLLQIKCVTQE*IINKTHHIGGI Trigger: TATTCCTCCTATGTGATGTGTTTTGTTAATGATCAACTCCTGGGTAACGCATTTGATCTGAAGAAGTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105507.5 |
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| CDS CAA 72 bp | AAAATCCTGACGTTCCTGTGCACAAGACCTGAAAATTaGTACATGTTCTGGGACATGCATCACAATACAGCT | + |
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Preference number: 6 (lower is better) Translates to: KILTFLCTRPEN*YMFWDMHHNTA Trigger: AGCTGTATTGTGATGCATGTCCCAGAACATGTACAAATTTTCAGGTCTTGTGCACAGGAACGTCAGGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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| CDS CAA 90 bp | CATTCTGAACTACTCGATGAAAAATCGAATCTTTGTAATGAAGCTTaGTGCCTCTCTCAGAAAATCCTGACGTTCCTGTGCACAAGACCT | + |
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Preference number: 6 (lower is better) Translates to: HSELLDEKSNLCNEA*CLSQKILTFLCTRP Trigger: AGGTCTTGTGCACAGGAACGTCAGGATTTTCTGAGAGAGGCACAAAGCTTCATTACAAAGATTCGATTTTTCATCGAGTAGTTCAGAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105507.5 ENSMUST00000214145.2 |
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