Pregenerated sensors for PPIL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015757Ensembl transcript IDs: ENSMUST00000015901.11, ENSMUST00000143214.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGCTAACATCGAAACCGCAGTCAGCTGTGCTGGCAGGCACTGAGTaGGTCTGCGTGCCCCAGCTCAGGCCGGAGCAGACCTGCTACAAT | + |
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Preference number: 1 (lower is better) Translates to: TLTSKPQSAVLAGTE*VCVPQLRPEQTCYN Trigger: ATTGTAGCAGGTCTGCTCCGGCCTGAGCTGGGGCACGCAGACGCACTCAGTGCCTGCCAGCACAGCTGACTGCGGTTTCGATGTTAGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 90 bp | GCCTGCACGCACGAGTTTGTACAGTATGTGGAGGCAAGAGGTCAGTaGCGAGTGTCTTCCTCGGTCACTCGAACTGCCTGGAGCTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: ACTHEFVQYVEARGQ*RVSSSVTRTAWSFP Trigger: GGGGAAGCTCCAGGCAGTTCGAGTGACCGAGGAAGACACTCGGCACTGACCTCTTGCCTCCACATACTGTACAAACTCGTGCGTGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 90 bp | CCTACCGTTCTGTATGCAGAACAGCTGTGTATTCGGGTGTGTGTGTaGCTGCACGCACGAGTTTGTACAGTATGTGGAGGCAAGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: PTVLYAEQLCIRVCV*LHARVCTVCGGKRS Trigger: TGACCTCTTGCCTCCACATACTGTACAAACTCGTGCGTGCAGGCACACACACACCCGAATACACAGCTGTTCTGCATACAGAACGGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 90 bp | CCATGTTTTAGGTTCATCTGTGTGAGCAACACCTACCGTTCTGTATaGAGAACAGCTGTGTATTCGGGTGTGTGTGTGCCTGCACGCACG | + |
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Preference number: 1 (lower is better) Translates to: PCFRFICVSNTYRSV*RTAVYSGVCVPART Trigger: CGTGCGTGCAGGCACACACACACCCGAATACACAGCTGTTCTGCATACAGAACGGTAGGTGTTGCTCACACAGATGAACCTAAAACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR TCA 90 bp | TTCAATACTCCAGAGCTCTTAAATCGAGTCTCCGCAGTCAGTGGATaGCTTCTCGTTGCTTCCAGCCTGTCCCTGCTCATTCTTCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: FNTPELLNRVSAVSG*LLVASSLSLLILLD Trigger: GTCTAGAAGAATGAGCAGGGACAGGCTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTTAAGAGCTCTGGAGTATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR TCA 90 bp | TGTGACCTCATTTTTATGGGAGTCTACAAAAGTCCAACTCAAGAATaGAATGACATCGGACTCCAGGGCAGTGGTTCTCAACCTGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: CDLIFMGVYKSPTQE*NDIGLQGSGSQPVG Trigger: ACCCACAGGTTGAGAACCACTGCCCTGGAGTCCGATGTCATTTCATTCTTGAGTTGGACTTTTGTAGACTCCCATAAAAATGAGGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR TCA 90 bp | AGTGCCACTCTGGCAAGTAGTTCCCTGTTGTATAAGAAAGTACACTaGGCAAGCTATGAGGAGCAAGTCAAGGAGAAGTGTTACTTCATG | + |
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Preference number: 1 (lower is better) Translates to: SATLASSSLLYKKVH*ASYEEQVKEKCYFM Trigger: CATGAAGTAACACTTCTCCTTGACTTGCTCCTCATAGCTTGCTCAGTGTACTTTCTTATACAACAGGGAACTACTTGCCAGAGTGGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR CCA 90 bp | TCCGAGTTTAAGGAACACACCTTTAATCTGGGCTACACCTTCTGCTaGAGACAATATAAGGACATTGAAAGAAGGGAGTCTAGCTCTAGC | + |
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Preference number: 1 (lower is better) Translates to: SEFKEHTFNLGYTFC*RQYKDIERRESSSS Trigger: GCTAGAGCTAGACTCCCTTCTTTCAATGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTGTTCCTTAAACTCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR TCA 90 bp | ACGGCTCCCTCAGATTGCCTGTACCAAGTATATAGAACATTTTCTTaGTTACTTATTGATAGAAGAGGGTTCAGCCCACACAGGGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: TAPSDCLYQVYRTFS*LLIDRRGFSPHRVS Trigger: ACTGACCCTGTGTGGGCTGAACCCTCTTCTATCAATAAGTAATCAAGAAAATGTTCTATATACTTGGTACAGGCAATCTGAGGGAGCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR GCA 90 bp | ATCTCCGAGTTTAAGGAACACACCTTTAATCTGGGCTACACCTTCTaGTGGAGACAATATAAGGACATTGAAAGAAGGGAGTCTAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: ISEFKEHTFNLGYTF*WRQYKDIERRESSS Trigger: AGAGCTAGACTCCCTTCTTTCAATGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTGTTCCTTAAACTCGGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR TCA 90 bp | GGATACTCTTTATCCTTTAGGAAGGAAAGGCATTTGCAACATGGGTaGACCTGGACAACATTAATACTGAGTGATATAAGCAGGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: GYSLSFRKERHLQHG*TWTTLILSDISRHR Trigger: TCTGTGCCTGCTTATATCACTCAGTATTAATGTTGTCCAGGTTCACCCATGTTGCAAATGCCTTTCCTTCCTAAAGGATAAAGAGTATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 90 bp | GAAGGGATATATGGAGCTTTCATAGTGAGTGACACTCTTACCTCTTaGGCTGCAGCCAGGTACATTTTCTGTTTTATGCTTTACATACAA | + |
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Preference number: 1 (lower is better) Translates to: EGIYGAFIVSDTLTS*AAARYIFCFMLYIQ Trigger: TTGTATGTAAAGCATAAAACAGAAAATGTACCTGGCTGCAGCGCAAGAGGTAAGAGTGTCACTCACTATGAAAGCTCCATATATCCCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR CCA 90 bp | TTCCAGAAGATTGAATCTCCGAGTTTAAGGAACACACCTTTAATCTaGGCTACACCTTCTGCTGGAGACAATATAAGGACATTGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: FQKIESPSLRNTPLI*ATPSAGDNIRTLKE Trigger: TTCTTTCAATGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTGTTCCTTAAACTCGGAGATTCAATCTTCTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR TCA 90 bp | AAGGCATTTGCAACATGGGTGAACCTGGACAACATTAATACTGAGTaGTATAAGCAGGCACAGAAACACAAATTCTATGTGACCTCATTT | + |
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Preference number: 1 (lower is better) Translates to: KAFATWVNLDNINTE*YKQAQKHKFYVTSF Trigger: AAATGAGGTCACATAGAATTTGTGTTTCTGTGCCTGCTTATATCACTCAGTATTAATGTTGTCCAGGTTCACCCATGTTGCAAATGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 90 bp | ATACAATTCACATACCAGGTAAATTACAGCAACCATAACTATAAATaGATTGAAAACTCAAACCACATGGCCAGAAAGTGCCATGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: IQFTYQVNYSNHNYK*IENSNHMARKCHAQ Trigger: CTGAGCATGGCACTTTCTGGCCATGTGGTTTGAGTTTTCAATGCATTTATAGTTATGGTTGCTGTAATTTACCTGGTATGTGAATTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR CCA 90 bp | TATAAGCAGGCACAGAAACACAAATTCTATGTGACCTCATTTTTATaGGAGTCTACAAAAGTCCAACTCAAGAATGAAATGACATCGGAC | + |
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Preference number: 1 (lower is better) Translates to: YKQAQKHKFYVTSFL*ESTKVQLKNEMTSD Trigger: GTCCGATGTCATTTCATTCTTGAGTTGGACTTTTGTAGACTCCCATAAAAATGAGGTCACATAGAATTTGTGTTTCTGTGCCTGCTTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR TCA 90 bp | TTAATACTGAGTGATATAAGCAGGCACAGAAACACAAATTCTATGTaGCCTCATTTTTATGGGAGTCTACAAAAGTCCAACTCAAGAATG | + |
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Preference number: 1 (lower is better) Translates to: LILSDISRHRNTNSM*PHFYGSLQKSNSRM Trigger: CATTCTTGAGTTGGACTTTTGTAGACTCCCATAAAAATGAGGTCACATAGAATTTGTGTTTCTGTGCCTGCTTATATCACTCAGTATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR GCA 90 bp | TTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGAGTGTCTTCCTCGGTCACTCCTGAGTGCGTCTGCGTaGCCCAGCTCAGGCCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LYSMWRQEVSAECLPRSLLSASA*PSSGRS Trigger: GCTCCGGCCTGAGCTGGGGCACGCAGACGCACTCAG...GAGTGACCGAGGAAGACACTCGGCACTGACCTCTTGCCTCCACATACTGTACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTAAATCGAGTCTCCGCAGTCAGTGGATGACTTCTCGTTGCTTCCAGCCTCGCAGTCAGCTGTGCTaGCAGGCACTGAGTGCGTCT | + |
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Preference number: 2 (lower is better) Translates to: ALKSSLRSQWMTSRCFQPRSQLC*QALSAS Trigger: AGACGCACTCAGTGCCTGCCAGCACAGCTGACTGCG...AGGCTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTTAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR CAA 90 bp | AGAACAGCTGTGTATTCGGGTGTGTGTGTGCCTGCACGCACGAGTTaGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGAGTGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RTAVYSGVCVPARTS*YSMWRQEVSAECLP Trigger: AGGAAGACACTCGGCACTGACCTCTTGCCTCCACATACTGTACAAACTCGTGCGTGCAGGCACACACACACCCGAATACACAGCTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR GCA 90 bp | CAACTCAGAATAATTCCTGCAAGGAGAAGGGATATATGGAGCTTTCATAGTGAGGGCACTGAGTGCGTCTaGGTGCCCCAGCTCAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: QLRIIPARRRDIWSFHSEGTECV*VPQLRP Trigger: CGGCCTGAGCTGGGGCACGCAGACGCACTCAGTGCC...CTCACTATGAAAGCTCCATATATCCCTTCTCCTTGCAGGAATTATTCTGAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR TCA 90 bp | TTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGAGTGTCTTCCTCGGTCACTCTATGTGGTGAGGATCTaGACTCAGTCCTGTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LYSMWRQEVSAECLPRSLYVVRI*TQSCAD Trigger: ATCAGCACAGGACTGAGTTCAGATCCTCACCACATA...GAGTGACCGAGGAAGACACTCGGCACTGACCTCTTGCCTCCACATACTGTACAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR GCA 90 bp | TCTAACGAGCTTGAGATCAGCCTGGTCCATATAGTGAGTTCTAAGACAGGCACGTCTAGCTCTAGCTCTTaGTCCTTCGCCTGCTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SNELEISLVHIVSSKTGTSSSSS*SFACLL Trigger: CAGCAAGCAGGCGAAGGAGCAAGAGCTAGAGCTAGA...CGTGCCTGTCTTAGAACTCACTATATGGACCAGGCTGATCTCAAGCTCGTTAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTCTTAAATCGAGTCTCCGCAGTCAGTGGATGACTTCTCGTTGCTTCCAGTCTTACCTCTTGCGCTaGAGCCAGGTACATTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RALKSSLRSQWMTSRCFQSYLLR*SQVHFL Trigger: CAGAAAATGTACCTGGCTGCAGCGCAAGAGGTAAGA...CTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTTAAGAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR CAA 90 bp | CCTTTAATCTGGGCTACACCTTCTGCTGGAGACAATATAAGGACATaGAAAGAAGGGAGTCTAGCTCTAGCTCTTGCTCCTTCGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PLIWATPSAGDNIRT*KEGSLALALAPSPA Trigger: AGCAGGCGAAGGAGCAAGAGCTAGAGCTAGACTCCCTTCTTTCAATGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAACGAGCTTGAGATCAGCCTGGTCCATATAGTGAGTTCTAAGACAGGCACGCGACTGAAAAATTGTTaGGAATTGGGCTGCCGACTG | + |
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Preference number: 2 (lower is better) Translates to: SNELEISLVHIVSSKTGTRLKNC*ELGCRL Trigger: CAGTCGGCAGCCCAATTCCCAACAATTTTTCAGTCG...CGTGCCTGTCTTAGAACTCACTATATGGACCAGGCTGATCTCAAGCTCGTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATCCCAGTCTCTGCAGTGGACTCTGAGAAGGTTGGGCTGGAATATGAGGAGGAACAGAACAAAATCTaGGTCAGAGGCAAACCTAAG | + |
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Preference number: 2 (lower is better) Translates to: IIPVSAVDSEKVGLEYEEEQNKI*VRGKPK Trigger: CTTAGGTTTGCCTCTGACTCAGATTTTGTTCTGTTC...CTCCTCATATTCCAGCCCAACCTTCTCAGAGTCCACTGCAGAGACTGGGATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTCTTAAATCGAGTCTCCGCAGTCAGTGGATGACTTCTCGTTGCTTCCAGATAATGGAGCAAATGTaGTCTGAGCTGTATGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: RALKSSLRSQWMTSRCFQIMEQM*SELYGR Trigger: TCTACCATACAGCTCAGAGCACATTTGCTCCATTAT...CTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTTAAGAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR GCA 90 bp | CAGATCTCTAACGAGCTTGAGATCAGCCTGGTCCATATAGTGAGTTCTAAGACATTACTTCATGGCTTCTaGTTCGGTTCCTGCCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: QISNELEISLVHIVSSKTLLHGF*FGSCLK Trigger: CTTAAGGCAGGAACCGAAGCAGAAGCCATGAAGTAA...TGTCTTAGAACTCACTATATGGACCAGGCTGATCTCAAGCTCGTTAGAGATCTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR CAA 90 bp | CAGATTGCCTGTACCAAGTATATAGAACATTTTCTTGATTACTTATaGATAGAAGAGGGTTCAGCCCACACAGGGTCAGTGCCACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QIACTKYIEHFLDYL*IEEGSAHTGSVPLW Trigger: CCAGAGTGGCACTGACCCTGTGTGGGCTGAACCCTCTTCTATCAATAAGTAATCAAGAAAATGTTCTATATACTTGGTACAGGCAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR CAA 90 bp | CTCAAAACGAGGAAAATGGAGGATCAGTTTAAGCCCATTCTCAGCTaGGTAGGCACTGAGTTCAAGATCAAGCTGGGTTATATGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: LKTRKMEDQFKPILS*VGTEFKIKLGYMRS Trigger: AGATCTCATATAACCCAGCTTGATCTTGAACTCAGTGCCTACCAAGCTGAGAATGGGCTTAAACTGATCCTCCATTTTCCTCGTTTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCCATGCTCAGTTGAAATGTTCACAGTGGCATTCCTCAGATAGCAAAAACACCATCAGTGTAACCTaGAAGGCAACAACGCTAACA | + |
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Preference number: 2 (lower is better) Translates to: KCHAQLKCSQWHSSDSKNTISVT*KATTLT Trigger: TGTTAGCGTTGTTGCCTTTCAGGTTACACTGATGGT...GTTTTTGCTATCTGAGGAATGCCACTGTGAACATTTCAACTGAGCATGGCACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR CCA 90 bp | TCTAACGAGCTTGAGATCAGCCTGGTCCATATAGTGAGTTCTAAGACAGGCACGTACACTCTCCTTTCCTaGTTTCTTTTGATCATAGTG | + |
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Preference number: 2 (lower is better) Translates to: SNELEISLVHIVSSKTGTYTLLS*FLLIIV Trigger: CACTATGATCAAAAGAAACCAGGAAAGGAGAGTGTA...CGTGCCTGTCTTAGAACTCACTATATGGACCAGGCTGATCTCAAGCTCGTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCCTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGACACTCTTACCTCTTaGGCTGCAGCCAGGTACATT | + |
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Preference number: 2 (lower is better) Translates to: ISLEKMLAPDIVKPFLLVDTLTS*AAARYI Trigger: AATGTACCTGGCTGCAGCGCAAGAGGTAAGAGTGTC...TACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAGGGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR TCA 90 bp | CTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGTCAAAAGCTTTCATAGTGAGTaGCACTCTTACCTCTTGCGC | + |
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Preference number: 2 (lower is better) Translates to: LEKMLAPDIVKPFLLVVKSFHSE*HSYLLR Trigger: GCGCAAGAGGTAAGAGTGTCACTCACTATGAAAGCT...TTTGACTACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR TCA 90 bp | AAAATTGTTGGGAATTGGGCTGCCGACTGTAAGTCATCAATAAATTCCTTTACTGACTCTAGAGAACCCTaGCTAATACACTCTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: KIVGNWAADCKSSINSFTDSREP*LIHSPF Trigger: GAAAGGAGAGTGTATTAGTCAGGGTTCTCTAGAGTC...AGTAAAGGAATTTATTGATGACTTACAGTCGGCAGCCCAATTCCCAACAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCCCTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAAAAACTCAAACCACATaGCCAGAAAGTGCCATGCTC | + |
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Preference number: 2 (lower is better) Translates to: ISLEKMLAPDIVKPFLLVKTQTT*PESAML Trigger: GAGCATGGCACTTTCTGGCCATGTGGTTTGAGTTTT...TACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAGGGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGTAGTGGCTATTCCTGGTTGTCAACTTGACAATATTTGGAATGAACTACAAATTCACAGCTGCGACTaGAAAATTGTTGGGAATTGG | + |
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Preference number: 2 (lower is better) Translates to: SVVAIPGCQLDNIWNELQIHSCD*KIVGNW Trigger: CCAATTCCCAACAATTTTTCAGTCGCAGCTGTGAAT...TTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAGGAATAGCCACTACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGTCAAAAAAGTATACACAAAATaGCTCCCTCTCTTCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LEKMLAPDIVKPFLLVVKKVYTK*LPLFQS Trigger: GCTCTGGAAGAGAGGGAGGCATTTTGTGTATACTTT...TTTGACTACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 72 bp | CCGCAGTCAGCTGTGCTGGCAGGCACTGAGTGCGTCTaGGTGCCCCAGCTCAGGCCGGAGCAGACCTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: PQSAVLAGTECV*VPQLRPEQTCY Trigger: GTAGCAGGTCTGCTCCGGCCTGAGCTGGGGCACGCAGACGCACTCAGTGCCTGCCAGCACAGCTGACTGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 72 bp | TCGAAACCGCAGTCAGCTGTGCTGGCAGGCACTGAGTaGGTCTGCGTGCCCCAGCTCAGGCCGGAGCAGACC | + |
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Preference number: 3 (lower is better) Translates to: SKPQSAVLAGTE*VCVPQLRPEQT Trigger: GGTCTGCTCCGGCCTGAGCTGGGGCACGCAGACGCACTCAGTGCCTGCCAGCACAGCTGACTGCGGTTTCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 72 bp | TATGGCTGGGGGTCACCACGACAGGAACTGAAGGGCTaGAGCCTTAGGAAGATTGAGAAGCACTGCCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: YGWGSPRQELKG*SLRKIEKHCPQ Trigger: CTGAGGGCAGTGCTTCTCAATCTTCCTAAGGCTGCAGCCCTTCAGTTCCTGTCGTGGTGACCCCCAGCCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR GCA 72 bp | CACGAGTTTGTACAGTATGTGGAGGCAAGAGGTCAGTaGCGAGTGTCTTCCTCGGTCACTCGAACTGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: HEFVQYVEARGQ*RVSSSVTRTAW Trigger: CCAGGCAGTTCGAGTGACCGAGGAAGACACTCGGCACTGACCTCTTGCCTCCACATACTGTACAAACTCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR TCA 72 bp | CCCTCTCTTCCAGAGCCCCACACCATCAGTGTAACCTaGAAGGCAACAACGCTAACATCGAAACCGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PSLPEPHTISVT*KATTLTSKPQS Trigger: TGACTGCGGTTTCGATGTTAGCGTTGTTGCCTTTCAGGTTACACTGATGGTGTGGGGCTCTGGAAGAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR TCA 72 bp | CCAGAGCTCTTAAATCGAGTCTCCGCAGTCAGTGGATaGCTTCTCGTTGCTTCCAGCCTGTCCCTGCTCATT | + |
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Preference number: 3 (lower is better) Translates to: PELLNRVSAVSG*LLVASSLSLLI Trigger: AATGAGCAGGGACAGGCTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTTAAGAGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR CCA 72 bp | TACTCCAGAGCTCTTAAATCGAGTCTCCGCAGTCAGTaGATGACTTCTCGTTGCTTCCAGCCTGTCCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: YSRALKSSLRSQ*MTSRCFQPVPA Trigger: AGCAGGGACAGGCTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTTAAGAGCTCTGGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| 3UTR-3UTR CAA 90 bp | AAGGACATTGAAAGAAGGGAGTCTAGCTCTAGCTCTTGCTCCTTCGCCTGCTTGGCTGCGACTGAAAAATaGTTGGGAATTGGGCTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: KDIERRESSSSSCSFACLAATEK*LGIGLP Trigger: CGGCAGCCCAATTCCCAACAATTTTTCAGTCGCAGC...CAAGCAGGCGAAGGAGCAAGAGCTAGAGCTAGACTCCCTTCTTTCAATGTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| 3UTR GCA 72 bp | AAATCGAGTCTCCGCAGTCAGTGGATGACTTCTCGTTaGTTCCAGCCTGTCCCTGCTCATTCTTCTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: KSSLRSQWMTSR*FQPVPAHSSRP Trigger: TGGTCTAGAAGAATGAGCAGGGACAGGCTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR GCA 72 bp | AGGTTCATCTGTGTGAGCAACACCTACCGTTCTGTATaGAGAACAGCTGTGTATTCGGGTGTGTGTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RFICVSNTYRSV*RTAVYSGVCVP Trigger: AGGCACACACACACCCGAATACACAGCTGTTCTGCATACAGAACGGTAGGTGTTGCTCACACAGATGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR TCA 72 bp | TTATTAGTCGCATGCACTGGGTATGTGGTGAGGATCTaGACTCAGTCCTGTGCTGATGAGGAAACACTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LLVACTGYVVRI*TQSCADEETLY Trigger: GTACAGTGTTTCCTCATCAGCACAGGACTGAGTTCAGATCCTCACCACATACCCAGTGCATGCGACTAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR TCA 72 bp | TATGGGAGTCTACAAAAGTCCAACTCAAGAATGAAATaGCATCGGACTCCAGGGCAGTGGTTCTCAACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: YGSLQKSNSRMK*HRTPGQWFSTC Trigger: ACAGGTTGAGAACCACTGCCCTGGAGTCCGATGTCATTTCATTCTTGAGTTGGACTTTTGTAGACTCCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR TCA 72 bp | AGATCTCTGAGTTCAAAACCAGCCTGGTCTATAGAATaGATTCCAGGCCAGCCAGGAATAGAGACATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RSLSSKPAWSIE*IPGQPGIETSS Trigger: AGAGGATGTCTCTATTCCTGGCTGGCCTGGAATTCATTCTATAGACCAGGCTGGTTTTGAACTCAGAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| 3UTR TCA 72 bp | ACTCAAACCACATGGCCAGAAAGTGCCATGCTCAGTTaGAATGTTCACAGTGGCATTCCTCAGATAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TQTTWPESAMLS*NVHSGIPQIAK Trigger: TTTTGCTATCTGAGGAATGCCACTGTGAACATTTCAACTGAGCATGGCACTTTCTGGCCATGTGGTTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR TCA 72 bp | CTGGCAAGTAGTTCCCTGTTGTATAAGAAAGTACACTaGGCAAGCTATGAGGAGCAAGTCAAGGAGAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LASSSLLYKKVH*ASYEEQVKEKC Trigger: ACACTTCTCCTTGACTTGCTCCTCATAGCTTGCTCAGTGTACTTTCTTATACAACAGGGAACTACTTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| 3UTR GCA 72 bp | TATGGAGCTTTCATAGTGAGTGACACTCTTACCTCTTaGGCTGCAGCCAGGTACATTTTCTGTTTTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: YGAFIVSDTLTS*AAARYIFCFML Trigger: AAGCATAAAACAGAAAATGTACCTGGCTGCAGCGCAAGAGGTAAGAGTGTCACTCACTATGAAAGCTCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR GCA 72 bp | AAATGCATTGAAAACTCAAACCACATGGCCAGAAAGTaGCATGCTCAGTTGAAATGTTCACAGTGGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: KCIENSNHMARK*HAQLKCSQWHS Trigger: GGAATGCCACTGTGAACATTTCAACTGAGCATGGCACTTTCTGGCCATGTGGTTTGAGTTTTCAATGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR TCA 72 bp | AAGGAGATTTGGGTCAGAGTAGATGGTTTTACTAAGTaGACGGAAGAAATGTCTGGAAAGTATTGGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KEIWVRVDGFTK*TEEMSGKYWRE Trigger: CTCCCTCCAATACTTTCCAGACATTTCTTCCGTTCACTTAGTAAAACCATCTACTCTGACCCAAATCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR TCA 72 bp | ATTTTTATGGGAGTCTACAAAAGTCCAACTCAAGAATaGAATGACATCGGACTCCAGGGCAGTGGTTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: IFMGVYKSPTQE*NDIGLQGSGSQ Trigger: TTGAGAACCACTGCCCTGGAGTCCGATGTCATTTCATTCTTGAGTTGGACTTTTGTAGACTCCCATAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR TCA 72 bp | AGAAGGAAGCACTCCTGTTTGAAAGAGCTGTCTAACTaGGCTGCAGGACAAAGTGATGAATCAGAATTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRKHSCLKELSN*AAGQSDESELK Trigger: CTTTAATTCTGATTCATCACTTTGTCCTGCAGCTCAGTTAGACAGCTCTTTCAAACAGGAGTGCTTCCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCTATTCTCAAAACGAGGAAAATGGAGGATCAGTTTAAGCCCATTCTCAGCTTTCTTGATTACTTATaGATAGAAGAGGGTTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASILKTRKMEDQFKPILSFLDYL*IEEGSA Trigger: GGCTGAACCCTCTTCTATCAATAAGTAATCAAGAAA...GCTGAGAATGGGCTTAAACTGATCCTCCATTTTCCTCGTTTTGAGAATAGAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGTCAAAAAGTGCCATGCTCAGTaGAAATGTTCACAGTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LEKMLAPDIVKPFLLVVKKCHAQ*KCSQWH Trigger: ATGCCACTGTGAACATTTCAACTGAGCATGGCACTT...TTTGACTACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR TCA 72 bp | TTTTCAGTAAATAACACAATCTTGGGGTTCACAATGTaGTCAAATATCCTGCAACTAGGCACCATTTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FSVNNTILGFTM*SNILQLGTICV Trigger: CACACAAATGGTGCCTAGTTGCAGGATATTTGATCACATTGTGAACCCCAAGATTGTGTTATTTACTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAGTGCGTCTGCGTGCCCCAGCTCAGGCCGGAGCAGACCTGCTACAATTGTACCCGTGCTGGTCACTaGCGTTGTTCACCATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TECVCVPQLRPEQTCYNCTRAGH*RCSPWT Trigger: TGTCCATGGTGAACAACGGCAGTGACCAGCACGGGT...ACAATTGTAGCAGGTCTGCTCCGGCCTGAGCTGGGGCACGCAGACGCACTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCTGCACGCACGAGTTTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGTGCCGTTGTTCACCATaGACACAGTGCCTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCLHARVCTVCGGKRSVPCRCSP*TQCLSS Trigger: AGAAGAAAGGCACTGTGTCCATGGTGAACAACGGCA...CGGCACTGACCTCTTGCCTCCACATACTGTACAAACTCGTGCGTGCAGGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCTGCACGCACGAGTTTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGGTTCTGTCTGGTACTTaGGTTTGTGGCTGTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCLHARVCTVCGGKRSVPVLSGT*VCGCCY Trigger: ATAGCAACAGCCACAAACCCAAGTACCAGACAGAAC...CGGCACTGACCTCTTGCCTCCACATACTGTACAAACTCGTGCGTGCAGGCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR TCA 90 bp | AACACCTACCGTTCTGTATGCAGAACAGCTGTGTATTCGGGTGTGTGTGTGCCTGTAGTGATAAGAAACTaGGACCCGTGCTGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NTYRSVCRTAVYSGVCVPVVIRN*DPCWSL Trigger: CAGTGACCAGCACGGGTCTCAGTTTCTTATCACTAC...AGGCACACACACACCCGAATACACAGCTGTTCTGCATACAGAACGGTAGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR TCA 90 bp | AGAGCTCTTAAATCGAGTCTCCGCAGTCAGTGGATGACTTCTCGTTGCTTCCAGTTGCAACAGACTGGCTaGAATCCACATGTATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RALKSSLRSQWMTSRCFQLQQTG*NPHVSS Trigger: GGAGGATACATGTGGATTTCAGCCAGTCTGTTGCAA...CTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTTAAGAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CCA 90 bp | TATAAATGCATTGAAAACTCAAACCACATGGCCAGAAAGTGCCATGCTCAGTTGCCACGTCGCCCAGAGTaGTCTCCAAGAGAACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YKCIENSNHMARKCHAQLPRRPE*SPREPP Trigger: TGGCGGTTCTCTTGGAGACCACTCTGGGCGACGTGG...CAACTGAGCATGGCACTTTCTGGCCATGTGGTTTGAGTTTTCAATGCATTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR GCA 90 bp | AACACCTACCGTTCTGTATGCAGAACAGCTGTGTATTCGGGTGTGTGTGTGCCTATTTCTTTGGACTCCTaGTTCTGTCCCTCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTYRSVCRTAVYSGVCVPISLDS*FCPSFC Trigger: GCAGAAAGAGGGACAGAAGCAGGAGTCCAAAGAAAT...AGGCACACACACACCCGAATACACAGCTGTTCTGCATACAGAACGGTAGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CCA 90 bp | TGGCTATTCCTGGTTGTCAACTTGACAATATTTGGAATGAACTACAATCCGGAACCACGTCGCCCAGAGTaGTCTCCAAGAGAACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLFLVVNLTIFGMNYNPEPRRPE*SPREPP Trigger: TGGCGGTTCTCTTGGAGACCACTCTGGGCGACGTGG...TTCCGGATTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAGGAATAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTATTCCTGGTTGTCAACTTGACAATATTTGGAATGAACTACAATCCGGAACAGTGTACAAGTCGATaGCCACGTCGCCCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLFLVVNLTIFGMNYNPEQCTSR*PRRPEW Trigger: CCACTCTGGGCGACGTGGTCATCGACTTGTACACTG...TTCCGGATTGTAGTTCATTCCAAATATTGTCAAGTTGACAACCAGGAATAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTTAAATCGAGTCTCCGCAGTCAGTGGATGACTTCTCGTTGCTTCCAGCCTTTGGAGTCTTCTCCCTaGTCATCTAGTATAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ALKSSLRSQWMTSRCFQPLESSP*SSSIRS Trigger: TGATCTTATACTAGATGAGCAGGGAGAAGACTCCAA...AGGCTGGAAGCAACGAGAAGTCATCCACTGACTGCGGAGACTCGATTTAAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGTCAAAGAGACCGGCTACGACTaGGGTTCTGACGTCGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEKMLAPDIVKPFLLVVKETGYD*GSDVGL Trigger: GAGACCGACGTCAGAACCGCAGTCGTAGCCGGTCTC...TTTGACTACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR TCA 90 bp | CTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGTCAAACAGTGTACAAGTCGATaGCCACGTCGCCCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEKMLAPDIVKPFLLVVKQCTSR*PRRPEW Trigger: CCACTCTGGGCGACGTGGTCATCGACTTGTACACTG...TTTGACTACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR TCA 90 bp | AACACCTACCGTTCTGTATGCAGAACAGCTGTGTATTCGGGTGTGTGTGTGCCTGCACATTATCCATTTTaGAGAATGCTTTCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NTYRSVCRTAVYSGVCVPAHYPF*RMLSHS Trigger: ACTGTGAGAAAGCATTCTTCAAAATGGATAATGTGC...AGGCACACACACACCCGAATACACAGCTGTTCTGCATACAGAACGGTAGGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR CAA 72 bp | AACTCAAACCACATGGCCAGAAAGTGCCATGCTCAGTaGAAATGTTCACAGTGGCATTCCTCAGATAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSNHMARKCHAQ*KCSQWHSSDSK Trigger: TTTGCTATCTGAGGAATGCCACTGTGAACATTTCAACTGAGCATGGCACTTTCTGGCCATGTGGTTTGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| 3UTR CAA 72 bp | AGGAAAATGGAGGATCAGTTTAAGCCCATTCTCAGCTaGGTAGGCACTGAGTTCAAGATCAAGCTGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RKMEDQFKPILS*VGTEFKIKLGY Trigger: ATAACCCAGCTTGATCTTGAACTCAGTGCCTACCAAGCTGAGAATGGGCTTAAACTGATCCTCCATTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| CDS-3UTR CCA 90 bp | TATAAATGCATTGAAAACTCAAACCACATGGCCAGAAAGTGCCATGCTCAGTTGACCTTTGCAACAGACTaGCTGAAATCCACATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: YKCIENSNHMARKCHAQLTFATD*LKSTCI Trigger: GATACATGTGGATTTCAGCCAGTCTGTTGCAAAGGT...CAACTGAGCATGGCACTTTCTGGCCATGTGGTTTGAGTTTTCAATGCATTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR TCA 90 bp | CAACTCAGAATAATTCCTGCAAGGAGAAGGGATATATGGAGCTTTCATAGTGAGTCCAAGAGAATAGCTTaGGTTTTAGCCTCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLRIIPARRRDIWSFHSESKRIA*VLASFS Trigger: AGAAAAAGAGGCTAAAACTCAAGCTATTCTCTTGGA...CTCACTATGAAAGCTCCATATATCCCTTCTCCTTGCAGGAATTATTCTGAGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CCA 90 bp | AAGTGCCATGCTCAGTTGAAATGTTCACAGTGGCATTCCTCAGATAGCAAAAACAAACAGCACATTTTCTaGAGGTTTAATATCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KCHAQLKCSQWHSSDSKNKQHIF*RFNICI Trigger: GATGCAGATATTAAACCTCCAGAAAATGTGCTGTTT...GTTTTTGCTATCTGAGGAATGCCACTGTGAACATTTCAACTGAGCATGGCACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR GCA 90 bp | CTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGTCAAAATCAATTTCTTCATCTaGTCCTATTCGACCACTATC | + |
|
Preference number: 4 (lower is better) Translates to: LEKMLAPDIVKPFLLVVKINFFI*SYSTTI Trigger: GATAGTGGTCGAATAGGAGCAGATGAAGAAATTGAT...TTTGACTACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CCA 90 bp | CTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGTCAAACCTTATATCTTGATATaGTACAAAATCCTTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEKMLAPDIVKPFLLVVKPYILI*YKILVH Trigger: GTGGACAAGGATTTTGTACCATATCAAGATATAAGG...TTTGACTACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CAA 90 bp | TTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGAGTGTCTTCCTCGGTCACTCTGCTGGTCACTGCCGTaGTTCACCATGGACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LYSMWRQEVSAECLPRSLCWSLP*FTMDTV Trigger: CACTGTGTCCATGGTGAACAACGGCAGTGACCAGCA...GAGTGACCGAGGAAGACACTCGGCACTGACCTCTTGCCTCCACATACTGTACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS GCA 90 bp | TTTCCCTCTCATAAGGTTCTGTCTGGTACTTGGGTTTGTGGCTGTTaGTATAGTGACCATCCCTTTCTCGAGACCGGCTACGACTGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FPSHKVLSGTWVCGC*YSDHPFLETGYDCG Trigger: ACCGCAGTCGTAGCCGGTCTCGAGAAAGGGATGGTCACTATAGCAACAGCCACAAACCCAAGTACCAGACAGAACCTTATGAGAGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CAA 90 bp | GTGTGCCTGCACGCACGAGTTTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGACAGTGCCTTTCTTCTaGTGCTTTATCCTTGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: VCLHARVCTVCGGKRSVPTVPFF*CFILGT Trigger: AGTACCAAGGATAAAGCACAAGAAGAAAGGCACTGT...CGGCACTGACCTCTTGCCTCCACATACTGTACAAACTCGTGCGTGCAGGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CAA 90 bp | TTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGAGTGTCTTCCTCGGTCACTCCGTGGGATCTCCTGTTaGTATGATAAAATCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LYSMWRQEVSAECLPRSLRGISC*YDKIPL Trigger: CAGAGGGATTTTATCATACAAACAGGAGATCCCACG...GAGTGACCGAGGAAGACACTCGGCACTGACCTCTTGCCTCCACATACTGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS CCA 90 bp | CCCTCTTTCTGCTTCTTTCCCTCTCATAAGGTTCTGTCTGGTACTTaGGTTTGTGGCTGTTGCTATAGTGACCATCCCTTTCTCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PSFCFFPSHKVLSGT*VCGCCYSDHPFLET Trigger: GGTCTCGAGAAAGGGATGGTCACTATAGCAACAGCCACAAACCCAAGTACCAGACAGAACCTTATGAGAGGGAAAGAAGCAGAAAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CAA 90 bp | CTACAATCCGGAATTGGAAGGCTCACCAGTGACCCTTATCTGGAGGCTTGGAGACGTGGGATCTCCTGTTaGTATGATAAAATCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQSGIGRLTSDPYLEAWRRGISC*YDKIPL Trigger: CAGAGGGATTTTATCATACAAACAGGAGATCCCACG...TCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAATTCCGGATTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143214.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGCCTGCACGCACGAGTTTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGAGCACATTATCCATTTaGAAGAATGCTTTCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VCLHARVCTVCGGKRSVPSTLSI*KNAFSQ Trigger: CTGTGAGAAAGCATTCTTCAAAATGGATAATGTGCT...CGGCACTGACCTCTTGCCTCCACATACTGTACAAACTCGTGCGTGCAGGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CAA 90 bp | GTTTGTACAGTATGTGGAGGCAAGAGGTCAGTGCCGAGTGTCTTCCTCGGTCACGATTTTTCTTTAGCTTaGGATTTCTTTGGACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCTVCGGKRSVPSVFLGHDFSLA*DFFGLL Trigger: CAGGAGTCCAAAGAAATCCAAAGCTAAAGAAAAATC...GTGACCGAGGAAGACACTCGGCACTGACCTCTTGCCTCCACATACTGTACAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CAA 90 bp | CAACTCAGAATAATTCCTGCAAGGAGAAGGGATATATGGAGCTTTCATAGTGAGCTCCAAGAGAATAGCTaGAGTTTTAGCCTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLRIIPARRRDIWSFHSELQENS*SFSLFF Trigger: GAAAAAGAGGCTAAAACTCAAGCTATTCTCTTGGAG...CTCACTATGAAAGCTCCATATATCCCTTCTCCTTGCAGGAATTATTCTGAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CAA 90 bp | TATAAATGCATTGAAAACTCAAACCACATGGCCAGAAAGTGCCATGCTCAGTTGTCCTTGAAATCACTCTaGGTATATTTCCCACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YKCIENSNHMARKCHAQLSLKSL*VYFPPF Trigger: AAAAGGTGGGAAATATACCAAGAGTGATTTCAAGGA...CAACTGAGCATGGCACTTTCTGGCCATGTGGTTTGAGTTTTCAATGCATTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS-3UTR CAA 90 bp | CTAGAAAAGATGCTAGCTCCTGATATAGTTAAGCCTTTTCTATTGGTAGTCAAATTGATCACCATACAGTaGTCCAAATATAGACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEKMLAPDIVKPFLLVVKLITIQ*SKYRLS Trigger: GGAGAGTCTATATTTGGACAACTGTATGGTGATCAA...TTTGACTACCAATAGAAAAGGCTTAACTATATCAGGAGCTAGCATCTTTTCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
||
| CDS TCA 72 bp | AGCAAGCCCGGGGACGCTCTTCAGTGTACAAGTCGATaGCCACGTCGCCCAGAGTGGTCTCCAAGAGAACCG | + |
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Preference number: 6 (lower is better) Translates to: SKPGDALQCTSR*PRRPEWSPREP Trigger: CGGTTCTCTTGGAGACCACTCTGGGCGACGTGGTCATCGACTTGTACACTGAAGAGCGTCCCCGGGCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015901.11 ENSMUST00000143214.2 |
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| CDS GCA 72 bp | CATAAGGTTCTGTCTGGTACTTGGGTTTGTGGCTGTTaGTATAGTGACCATCCCTTTCTCGAGACCGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: HKVLSGTWVCGC*YSDHPFLETGY Trigger: GTAGCCGGTCTCGAGAAAGGGATGGTCACTATAGCAACAGCCACAAACCCAAGTACCAGACAGAACCTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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| CDS CCA 72 bp | TGCTTCTTTCCCTCTCATAAGGTTCTGTCTGGTACTTaGGTTTGTGGCTGTTGCTATAGTGACCATCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CFFPSHKVLSGT*VCGCCYSDHPF Trigger: AAAGGGATGGTCACTATAGCAACAGCCACAAACCCAAGTACCAGACAGAACCTTATGAGAGGGAAAGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015901.11 |
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