Pregenerated sensors for PPIL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026035Ensembl transcript IDs: ENSMUST00000081677.12, ENSMUST00000114345.9, ENSMUST00000114348.8, ENSMUST00000117069.8, ENSMUST00000185990.2, ENSMUST00000190048.7
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAACCACAATaGGCGTGTTCCAGTGAAGTGTTCACCAAGTATCTGTCCAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: PFLQTPGEGELVKPQ*ACSSEVFTKYLSRS Trigger: GGACCTGGACAGATACTTGGTGAACACTTCACTGGAACACGCCCATTGTGGTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGAAACATCACCCACTCTACCTGCAGGCAAGGTGCGGCCACATCAACAAGAACTTCCTCAGGGGCTaGTGGCTGATGACTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: AEKHHPLYLQARCGHINKNFLRG*WLMTGV Trigger: CACCCCAGTCATCAGCCATCAGCCCCTGAGGAAGTT...CTTGTTGATGTGGCCGCACCTTGCCTGCAGGTAGAGTGGGTGATGTTTCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCACTGGTTAAACCACAATaGGCGTGTTCCAGTGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: AENMLRWEGSYRAPTWSPLVKPQ*ACSSEV Trigger: CACTTCACTGGAACACGCCCATTGTGGTTTAACCAG...TGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| 3UTR-3UTR CCA 90 bp | AATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTGCAGGAGAAGGAGAACTaGTTAAACCACAATGGGCGT | + |
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Preference number: 2 (lower is better) Translates to: NMLRWEGSYRAPTWSPFLQEKEN*LNHNGR Trigger: ACGCCCATTGTGGTTTAACCAGTTCTCCTTCTCCTG...CAGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCTGGTTAAACCACAATaGGCGTGTTCCAGTGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: REYAQMGGKLQGSYMEPILVKPQ*ACSSEV Trigger: CACTTCACTGGAACACGCCCATTGTGGTTTAACCAG...AATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| 3UTR TCA 72 bp | AGGGAGGGAAGAAAGAAGGATAACTTCCTCAGGGGCTaGTGGCTGATGACTGGGGTGTCCAGGGCGTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: REGRKKDNFLRG*WLMTGVSRAFS Trigger: ACTAAACGCCCTGGACACCCCAGTCATCAGCCATCAGCCCCTGAGGAAGTTATCCTTCTTTCTTCCCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| 3UTR CCA 72 bp | ATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATaGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: MLRWEGSYRAPT*SPFLQTPGEGE Trigger: TTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| 3UTR CCA 72 bp | GGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTaGTTAAACCACAATGGGCGTGTTCCAGTGAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GAHSCKHQEKEN*LNHNGRVPVKC Trigger: ACACTTCACTGGAACACGCCCATTGTGGTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| 3UTR TCA 72 bp | CTGATCAGGGACACTGTACACTGTACACCTCGGATCTaGTCAGGTACACTGTACACTGTACACCTCGGATCT | + |
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Preference number: 3 (lower is better) Translates to: LIRDTVHCTPRI*SGTLYTVHLGS Trigger: AGATCCGAGGTGTACAGTGTACAGTGTACCTGATCAGATCCGAGGTGTACAGTGTACAGTGTCCCTGATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| 3UTR CCA 72 bp | CAAACACCAGGAGAAGGAGAACTGGTTAAACCACAATaGGCGTGTTCCAGTGAAGTGTTCACCAAGTATCTG | + |
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Preference number: 3 (lower is better) Translates to: QTPGEGELVKPQ*ACSSEVFTKYL Trigger: CAGATACTTGGTGAACACTTCACTGGAACACGCCCATTGTGGTTTAACCAGTTCTCCTTCTCCTGGTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| 3UTR GCA 72 bp | GGTCTTTCCAGTGTTAGCTATGCTGTGATCACACCATaGAAGAACGCCAACATGCCAAAGAAAGAGATGACA | + |
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Preference number: 3 (lower is better) Translates to: GLSSVSYAVITP*KNANMPKKEMT Trigger: TGTCATCTCTTTCTTTGGCATGTTGGCGTTCTTGCATGGTGTGATCACAGCATAGCTAACACTGGAAAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| CDS-3UTR GCA 90 bp | GCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTGCAAACACTTTTTGGCCCAGATaGTGCTACCTCCTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: AQMGGKLQGSYMEPIPANTFWPR*CYLLFQ Trigger: CTGGAAGAGGAGGTAGCAGCATCTGGGCCAAAAAGT...GTTTGCAGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR GCA 90 bp | GAGAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCACTTTTTGGCCCAGATaGTGCTACCTCCTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ENMLRWEGSYRAPTWSPFTFWPR*CYLLFQ Trigger: CTGGAAGAGGAGGTAGCAGCATCTGGGCCAAAAAGT...GAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGTTTCATGTCCAAGTGTaGCTGCTTGCCATAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: GKLQGSYMEPIPANTRRRFHVQV*LLAIGD Trigger: ATCACCTATGGCAAGCAGCCACACTTGGACATGAAA...CCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR TCA 90 bp | ACAGGGCTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGGTTGGATCTCCTGTTTaGACCATGAAGCCCTTGATA | + |
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Preference number: 4 (lower is better) Translates to: TGLLHGAHSCKHQEKENWVGSPV*TMKPLI Trigger: TATCAAGGGCTTCATGGTTCAAACAGGAGATCCAAC...CCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAGCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGTTTCATGTCCAAGTGTaGCTGCTTGCCATAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: REATGLLHGAHSCKHQEKFHVQV*LLAIGD Trigger: ATCACCTATGGCAAGCAGCCACACTTGGACATGAAA...CTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR GCA 90 bp | TCTGATCAGGTACACTGTACACTGTACACCTCGGATCTGATCAGGGACACTTCCACTTTTTGGCCCAGATaGTGCTACCTCCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDQVHCTLYTSDLIRDTSTFWPR*CYLLFQ Trigger: CTGGAAGAGGAGGTAGCAGCATCTGGGCCAAAAAGT...GGAAGTGTCCCTGATCAGATCCGAGGTGTACAGTGTACAGTGTACCTGATCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| CDS-3UTR GCA 90 bp | CTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAACACTTTTTGGCCCAGATaGTGCTACCTCCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHGAHSCKHQEKENWLNTFWPR*CYLLFQ Trigger: CTGGAAGAGGAGGTAGCAGCATCTGGGCCAAAAAGT...GTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR TCA 90 bp | GCAGAGAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCAGCAAATGGGTTGGCATaGATAGTTATGTCCTTAATG | + |
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Preference number: 4 (lower is better) Translates to: AENMLRWEGSYRAPTWSPANGLA*IVMSLM Trigger: CATTAAGGACATAACTATTCATGCCAACCCATTTGC...TGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR TCA 90 bp | ATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTGCGCAAATGGGTTGGCATaGATAGTTATGTCCTTAATG | + |
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Preference number: 4 (lower is better) Translates to: ICSDGREATGLLHGAHSCANGLA*IVMSLM Trigger: CATTAAGGACATAACTATTCATGCCAACCCATTTGC...GCAGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR TCA 90 bp | GAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTGCAAATGGGTTGGCATaGATAGTTATGTCCTTAATG | + |
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Preference number: 4 (lower is better) Translates to: EYAQMGGKLQGSYMEPIPANGLA*IVMSLM Trigger: CATTAAGGACATAACTATTCATGCCAACCCATTTGC...AGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGCTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGACACCTCGAACATTGTaGTTCAGATATTCACTGTAT | + |
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Preference number: 4 (lower is better) Translates to: TGLLHGAHSCKHQEKENWTPRTL*FRYSLY Trigger: ATACAGTGAATATCTGAAGCACAATGTTCGAGGTGT...CCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAGCCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | CTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAACTTTCATGTCCAAGTGTaGCTGCTTGCCATAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LLHGAHSCKHQEKENWLNFHVQV*LLAIGD Trigger: ATCACCTATGGCAAGCAGCCACACTTGGACATGAAA...GTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | CAGTGGCAGAGAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGACGTTGTAGTAATTACTaGCACAAAGAGCCAAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: QWQRICSDGREATGLLHGRCSNY*HKEPRN Trigger: ATTTCTTGGCTCTTTGTGCCAGTAATTACTACAACG...TCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTCTCTGCCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | GAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTAGATCCATTGGTATTTaGGCCATTATTAGCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: EYAQMGGKLQGSYMEPIPRSIGI*AIISHR Trigger: TCTATGGCTAATAATGGCCCAAATACCAATGGATCT...AGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | ACTGTACACCTCGGATCTGATCAGGGACACTTCCCTGAAGGCACAGCTGAGAAAAATTCTCACATGTTTTaGGTGTTCTCTCACAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TVHLGSDQGHFPEGTAEKNSHMF*VFSHRR Trigger: TCTTCTGTGAGAGAACACCCAAAACATGTGAGAATT...TTTCTCAGCTGTGCCTTCAGGGAAGTGTCCCTGATCAGATCCGAGGTGTACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| CDS-3UTR CCA 90 bp | GGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAACCACAATGGGAATTCTCACATGTTTTaGGTGTTCTCTCACAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GAHSCKHQEKENWLNHNGNSHMF*VFSHRR Trigger: TCTTCTGTGAGAGAACACCCAAAACATGTGAGAATT...CCCATTGTGGTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | AGAGAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTAGATCCATTGGTATTTaGGCCATTATTAGCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: REYAQMGGKLQGSYMEPIRSIGI*AIISHR Trigger: TCTATGGCTAATAATGGCCCAAATACCAATGGATCT...AATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | GCGTTTAGTTGTGGAACTGGTCTTTCCAGTGTTAGCTATGCTGTGATCACACCATTTCATGTCCAAGTGTaGCTGCTTGCCATAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: AFSCGTGLSSVSYAVITPFHVQV*LLAIGD Trigger: ATCACCTATGGCAAGCAGCCACACTTGGACATGAAA...TGGTGTGATCACAGCATAGCTAACACTGGAAAGACCAGTTCCACAACTAAACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| CDS-3UTR TCA 90 bp | TGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAACCACAATGGAGAAGACTTCTATCTTaGTATCTCCCACATCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: WSPFLQTPGEGELVKPQWRRLLS*YLPHLY Trigger: ATACAGATGTGGGAGATATCAAGATAGAAGTCTTCT...CCATTGTGGTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR TCA 90 bp | TCTGATCAGGTACACTGTACACTGTACACCTCGGATCTGATCAGGGACACTTCCAGAAGACTTCTATCTTaGTATCTCCCACATCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SDQVHCTLYTSDLIRDTSRRLLS*YLPHLY Trigger: ATACAGATGTGGGAGATATCAAGATAGAAGTCTTCT...GGAAGTGTCCCTGATCAGATCCGAGGTGTACAGTGTACAGTGTACCTGATCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| CDS-3UTR TCA 90 bp | GCTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAAAGAAGACTTCTATCTTaGTATCTCCCACATCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: APTWSPFLQTPGEGELVKRRLLS*YLPHLY Trigger: ATACAGATGTGGGAGATATCAAGATAGAAGTCTTCT...TTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR TCA 90 bp | CTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAACAGAAGACTTCTATCTTaGTATCTCCCACATCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: LLHGAHSCKHQEKENWLNRRLLS*YLPHLY Trigger: ATACAGATGTGGGAGATATCAAGATAGAAGTCTTCT...GTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAACCACAATGGAATTCTCACATGTTTTaGGTGTTCTCTCACAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: WSPFLQTPGEGELVKPQWNSHMF*VFSHRR Trigger: TCTTCTGTGAGAGAACACCCAAAACATGTGAGAATT...CCATTGTGGTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | GCTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAAAATTCTCACATGTTTTaGGTGTTCTCTCACAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: APTWSPFLQTPGEGELVKNSHMF*VFSHRR Trigger: TCTTCTGTGAGAGAACACCCAAAACATGTGAGAATT...TTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CCA 90 bp | AGTTGTGGAACTGGTCTTTCCAGTGTTAGCTATGCTGTGATCACACCATGCAAGAGATCCATTGGTATTTaGGCCATTATTAGCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: SCGTGLSSVSYAVITPCKRSIGI*AIISHR Trigger: TCTATGGCTAATAATGGCCCAAATACCAATGGATCT...CTTGCATGGTGTGATCACAGCATAGCTAACACTGGAAAGACCAGTTCCACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| CDS-3UTR CAA 90 bp | AGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTGCAAACACCAGGAGAAGCAGAAGACTTCTATCTaGATATCTCCCACATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: REATGLLHGAHSCKHQEKQKTSI*ISPTSV Trigger: TACAGATGTGGGAGATATCAAGATAGAAGTCTTCTG...CTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CAA 90 bp | GAGAATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCAGAAGACTTCTATCTaGATATCTCCCACATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: ENMLRWEGSYRAPTWSPFQKTSI*ISPTSV Trigger: TACAGATGTGGGAGATATCAAGATAGAAGTCTTCTG...GAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CAA 90 bp | AATATGCTCAGATGGGAGGGAAGCTACAGGGCTCCTACATGGAGCCCATTCCTGCAGAAGACTTCTATCTaGATATCTCCCACATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: NMLRWEGSYRAPTWSPFLQKTSI*ISPTSV Trigger: TACAGATGTGGGAGATATCAAGATAGAAGTCTTCTG...CAGGAATGGGCTCCATGTAGGAGCCCTGTAGCTTCCCTCCCATCTGAGCATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS-3UTR CAA 90 bp | ACTGTACACCTCGGATCTGATCAGGGACACTTCCCTGAAGGCACAGCTGAGAAACAGAAGACTTCTATCTaGATATCTCCCACATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: TVHLGSDQGHFPEGTAEKQKTSI*ISPTSV Trigger: TACAGATGTGGGAGATATCAAGATAGAAGTCTTCTG...TTTCTCAGCTGTGCCTTCAGGGAAGTGTCCCTGATCAGATCCGAGGTGTACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114345.9 |
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| CDS-3UTR CAA 90 bp | ACATGGAGCCCATTCCTGCAAACACCAGGAGAAGGAGAACTGGTTAAACCACAAACAACACCTCGAACATaGTGCTTCAGATATTCACTG | + |
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Preference number: 5 (lower is better) Translates to: TWSPFLQTPGEGELVKPQTTPRT*CFRYSL Trigger: CAGTGAATATCTGAAGCACAATGTTCGAGGTGTTGT...TTGTGGTTTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081677.12 ENSMUST00000114348.8 ENSMUST00000117069.8 |
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| CDS CAA 72 bp | CATGTTTTGGGTGTTCTCTCACAGAAGACTTCTATCTaGATATCTCCCACATCTGTATGCAGTGTCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: HVLGVLSQKTSI*ISPTSVCSVTD Trigger: GTCTGTGACACTGCATACAGATGTGGGAGATATCAAGATAGAAGTCTTCTGTGAGAGAACACCCAAAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000081677.12 ENSMUST00000114345.9 ENSMUST00000114348.8 ENSMUST00000117069.8 ENSMUST00000185990.2 ENSMUST00000190048.7 |
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| CDS CCA 72 bp | TATTTCTATGAAACACACAGCCGTTGTAGTAATTACTaGCACAAAGAGCCAAGAAATTCTCACATGTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: YFYETHSRCSNY*HKEPRNSHMFW Trigger: CCAAAACATGTGAGAATTTCTTGGCTCTTTGTGCCAGTAATTACTACAACGGCTGTGTGTTTCATAGAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000081677.12 ENSMUST00000114345.9 ENSMUST00000114348.8 ENSMUST00000117069.8 ENSMUST00000185990.2 ENSMUST00000190048.7 |
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