Pregenerated sensors for PPIH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060288Ensembl transcript IDs: ENSMUST00000056458.14, ENSMUST00000106318.8, ENSMUST00000106319.8, ENSMUST00000106321.9, ENSMUST00000147077.8
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTACCCAGCAGAAACAGCCAGACCTCCGCTGAATCAGCGGGATTaGCCAGGACCGGCTGGGATGCCAAGCAAAGTTCTCTGTCGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: HYPAETARPPLNQRD*PGPAGMPSKVLCRA Trigger: GGCACGACAGAGAACTTTGCTTGGCATCCCAGCCGGTCCTGGTCAATCCCGCTGATTCAGCGGAGGTCTGGCTGTTTCTGCTGGGTAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR TCA 90 bp | ATTAGCAGCAATGGCACTACCCAGCAGAAACAGCCAGACCTCCGCTaGATCAGCGGGATTGACCAGGACCGGCTGGGATGCCAAGCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: ISSNGTTQQKQPDLR*ISGIDQDRLGCQAK Trigger: CTTTGCTTGGCATCCCAGCCGGTCCTGGTCAATCCCGCTGATTCAGCGGAGGTCTGGCTGTTTCTGCTGGGTAGTGCCATTGCTGCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR TCA 90 bp | CTGGGATGCCAAGCAAAGTTCTCTGTCGTGCCTCTCTCAACAAAGTaGAGATCAGTGAAGACAAAGACGTGTTGCAAAGGTAGCTATGCA | + |
|
Preference number: 1 (lower is better) Translates to: LGCQAKFSVVPLSTK*RSVKTKTCCKGSYA Trigger: TGCATAGCTACCTTTGCAACACGTCTTTGTCTTCACTGATCTTCACTTTGTTGAGAGAGGCACGACAGAGAACTTTGCTTGGCATCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR GCA 90 bp | AAGAATCAGCAACAGCAGGTCCATCCAGAGGAAACTGAGAGGCTCTaGTGTATGTGGTTTGGAAGAAGTTCCTTGGGGAGATTTCAATCT | + |
|
Preference number: 1 (lower is better) Translates to: KNQQQQVHPEETERL*CMWFGRSSLGRFQS Trigger: AGATTGAAATCTCCCCAAGGAACTTCTTCCAAACCACATACAGCAGAGCCTCTCAGTTTCCTCTGGATGGACCTGCTGTTGCTGATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR TCA 90 bp | ATCAGGGGTCAGCTTATGAACTCTTCATTAGAGATATGGAAGAAATaGGTGAGAACGGGAAAGAATCGCCAAGAGCTCTTGAAGTGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: IRGQLMNSSLEIWKK*VRTGKNRQELLKWE Trigger: CTCCCACTTCAAGAGCTCTTGGCGATTCTTTCCCGTTCTCACTCATTTCTTCCATATCTCTAATGAAGAGTTCATAAGCTGACCCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| 3UTR TCA 90 bp | TTATTTACAGTCCAAAATGTAAACAGGATGATTGGTTCTCGTTTGTaGTACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGC | + |
|
Preference number: 1 (lower is better) Translates to: LFTVQNVNRMIGSRL*YFQVLDRILWRQGS Trigger: GCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAACGAGAACCAATCATCCTGTTTACATTTTGGACTGTAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| 3UTR CCA 90 bp | GTTATTAGGTTACGGGGGAGGTGGACTTGCTTAGAAATAGTTCTTTaGAGCAAATCCATCATCAGTTCACTTCACAAGAATCAGCAACAG | + |
|
Preference number: 1 (lower is better) Translates to: VIRLRGRWTCLEIVL*SKSIISSLHKNQQQ Trigger: CTGTTGCTGATTCTTGTGAAGTGAACTGATGATGGATTTGCTCCAAAGAACTATTTCTAAGCAAGTCCACCTCCCCCGTAACCTAATAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR CAA 90 bp | GCACTACCCAGCAGAAACAGCCAGACCTCCGCTGAATCAGCGGGATaGACCAGGACCGGCTGGGATGCCAAGCAAAGTTCTCTGTCGTGC | + |
|
Preference number: 2 (lower is better) Translates to: ALPSRNSQTSAESAG*TRTGWDAKQSSLSC Trigger: GCACGACAGAGAACTTTGCTTGGCATCCCAGCCGGTCCTGGTCAATCCCGCTGATTCAGCGGAGGTCTGGCTGTTTCTGCTGGGTAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR-3UTR TCA 90 bp | AACAGCAGGTCCATCCAGAGGAAACTGAGAGGCTCTGCTGTATGTGGTTTGGAAACCACCACCGTCCACTaGGCCTTGTTCATACTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: NSRSIQRKLRGSAVCGLETTTVH*ALFILP Trigger: AGGGAGTATGAACAAGGCTCAGTGGACGGTGGTGGT...TTCCAAACCACATACAGCAGAGCCTCTCAGTTTCCTCTGGATGGACCTGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCTTGGGGAGATTTCAATCTCCAATTGCCAGGATACCAGCAGTCCAGTTCATTGACCAGGACCGGCTaGGATGCCAAGCAAAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VPWGDFNLQLPGYQQSSSLTRTG*DAKQSS Trigger: AGAACTTTGCTTGGCATCCCAGCCGGTCCTGGTCAA...TGAACTGGACTGCTGGTATCCTGGCAATTGGAGATTGAAATCTCCCCAAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR CAA 90 bp | GAGGAAACTGAGAGGCTCTGCTGTATGTGGTTTGGAAGAAGTTCCTaGGGGAGATTTCAATCTCCAATTGCCAGGATACCAGCAGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: EETERLCCMWFGRSS*GRFQSPIARIPAVQ Trigger: CTGGACTGCTGGTATCCTGGCAATTGGAGATTGAAATCTCCCCAAGGAACTTCTTCCAAACCACATACAGCAGAGCCTCTCAGTTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGTAGTCAGGATAGCAAACATGAATTAGCAGCAATGGCACTACCCAGCAGACAATCGGCTCAAGTCTaGAGCAGCCAGAAGTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: FSSQDSKHELAAMALPSRQSAQV*SSQKSP Trigger: TGGAGACTTCTGGCTGCTTCAGACTTGAGCCGATTG...TCTGCTGGGTAGTGCCATTGCTGCTAATTCATGTTTGCTATCCTGACTACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTTATGAACTCTTCATTAGAGATATGGAAGAAATGAGTGAGAACGGGAAAGAAGAAGTGGGAGCAGGTTaGGCCCAGGGGAATCCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: AYELFIRDMEEMSENGKEEVGAG*AQGNPH Trigger: ATGGGGATTCCCCTGGGCTCAACCTGCTCCCACTTC...TTCTTTCCCGTTCTCACTCATTTCTTCCATATCTCTAATGAAGAGTTCATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| 3UTR-3UTR GCA 90 bp | CGGGGGAGGTGGACTTGCTTAGAAATAGTTCTTTGGAGCAAATCCATCATCAGTGAAACTGAGAGGCTCTaGTGTATGTGGTTTGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RGRWTCLEIVLWSKSIISETERL*CMWFGR Trigger: TCTTCCAAACCACATACAGCAGAGCCTCTCAGTTTC...ACTGATGATGGATTTGCTCCAAAGAACTATTTCTAAGCAAGTCCACCTCCCCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGGATAGCAAACATGAATTAGCAGCAATGGCACTACCCAGCAGAAACAGCGTTTCTTTTTGTGTCTaGTTCAGCGAAACATTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SQDSKHELAAMALPSRNSVSFCV*FSETFF Trigger: GAAGAATGTTTCGCTGAAGCAGACACAAAAAGAAAC...GCTGTTTCTGCTGGGTAGTGCCATTGCTGCTAATTCATGTTTGCTATCCTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR TCA 72 bp | GCAGAAACAGCCAGACCTCCGCTGAATCAGCGGGATTaGCCAGGACCGGCTGGGATGCCAAGCAAAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AETARPPLNQRD*PGPAGMPSKVL Trigger: GAGAACTTTGCTTGGCATCCCAGCCGGTCCTGGTCAATCCCGCTGATTCAGCGGAGGTCTGGCTGTTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR TCA 72 bp | AGTGGGAGCAGGTTGAGCCCAGGGGAATCCCCATTGTaGCAGAAAGGCTCACGGTATCTGTTCAGCCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SGSRLSPGESPL*QKGSRYLFSLV Trigger: AACCAGGCTGAACAGATACCGTGAGCCTTTCTGTCACAATGGGGATTCCCCTGGGCTCAACCTGCTCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| 3UTR CCA 72 bp | GTGAGAACGGGAAAGAATCGCCAAGAGCTCTTGAAGTaGGAGCAGGTTGAGCCCAGGGGAATCCCCATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VRTGKNRQELLK*EQVEPRGIPIV Trigger: CACAATGGGGATTCCCCTGGGCTCAACCTGCTCCCACTTCAAGAGCTCTTGGCGATTCTTTCCCGTTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| 3UTR TCA 72 bp | AAAGAATCGCCAAGAGCTCTTGAAGTGGGAGCAGGTTaGGCCCAGGGGAATCCCCATTGTGACAGAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KESPRALEVGAG*AQGNPHCDRKA Trigger: AGCCTTTCTGTCACAATGGGGATTCCCCTGGGCTCAACCTGCTCCCACTTCAAGAGCTCTTGGCGATTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| 3UTR CCA 72 bp | AGAGGCTCTGCTGTATGTGGTTTGGAAGAAGTTCCTTaGGGAGATTTCAATCTCCAATTGCCAGGATACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGSAVCGLEEVP*GDFNLQLPGYQ Trigger: CTGGTATCCTGGCAATTGGAGATTGAAATCTCCCCAAGGAACTTCTTCCAAACCACATACAGCAGAGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCAGGTCCATCCAGAGGAAACTGAGAGGCTCTGCTGTATGTGGTTTGGAAACCACTAGCAGTTTTTaGGTGCGTTTCTTTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NSRSIQRKLRGSAVCGLETTSSF*VRFFLC Trigger: ACACAAAAAGAAACGCACCAAAAAACTGCTAGTGGT...TTCCAAACCACATACAGCAGAGCCTCTCAGTTTCCTCTGGATGGACCTGCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCATCAGTTCACTTCACAAGAATCAGCAACAGCAGGTCCATCCAGAGGAAACTTTGGTGCGTTTCTTTTaGTGTCTGCTTCAGCGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IISSLHKNQQQQVHPEETLVRFF*CLLQRN Trigger: GTTTCGCTGAAGCAGACACAAAAAGAAACGCACCAA...AGTTTCCTCTGGATGGACCTGCTGTTGCTGATTCTTGTGAAGTGAACTGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATCATCTAGTGATGATCAGGGGTCAGCTTATGAACTCTTCATTAGAGATATGAATCGCCAAGAGCTCTaGAAGTGGGAGCAGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSSDDQGSAYELFIRDMNRQEL*KWEQVE Trigger: CTCAACCTGCTCCCACTTCAAGAGCTCTTGGCGATT...CATATCTCTAATGAAGAGTTCATAAGCTGACCCCTGATCATCACTAGATGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| 3UTR TCA 72 bp | CAAGCAAAGTTCTCTGTCGTGCCTCTCTCAACAAAGTaGAGATCAGTGAAGACAAAGACGTGTTGCAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QAKFSVVPLSTK*RSVKTKTCCKG Trigger: ACCTTTGCAACACGTCTTTGTCTTCACTGATCTTCACTTTGTTGAGAGAGGCACGACAGAGAACTTTGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR CCA 72 bp | GAAAGAATGGGAACGGTTATTAGGTTACGGGGGAGGTaGACTTGCTTAGAAATAGTTCTTTGGAGCAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: ERMGTVIRLRGR*TCLEIVLWSKS Trigger: GGATTTGCTCCAAAGAACTATTTCTAAGCAAGTCCACCTCCCCCGTAACCTAATAACCGTTCCCATTCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR GCA 72 bp | TTGTGTCTGCTTCAGCGAAACATTCTTCCATGTGTGTaGTTTAGAAAACATCCTTTCACCTGGTTCCGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LCLLQRNILPCV*FRKHPFTWFRL Trigger: AAGACGGAACCAGGTGAAAGGATGTTTTCTAAAGCACACACATGGAAGAATGTTTCGCTGAAGCAGACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR TCA 72 bp | CAGCTTATGAACTCTTCATTAGAGATATGGAAGAAATaGGTGAGAACGGGAAAGAATCGCCAAGAGCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QLMNSSLEIWKK*VRTGKNRQELL Trigger: CAAGAGCTCTTGGCGATTCTTTCCCGTTCTCACTCATTTCTTCCATATCTCTAATGAAGAGTTCATAAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| 3UTR CCA 72 bp | TTACGGGGGAGGTGGACTTGCTTAGAAATAGTTCTTTaGAGCAAATCCATCATCAGTTCACTTCACAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRGRWTCLEIVL*SKSIISSLHKN Trigger: ATTCTTGTGAAGTGAACTGATGATGGATTTGCTCCAAAGAACTATTTCTAAGCAAGTCCACCTCCCCCGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGCAAACACAGAGGCCCCTGGCCGCCAATGCTaGCATCGAAGAAGACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSRSWIAYCGDREANTEAPGRQC*HRRRPL Trigger: CAGTGGTCTTCTTCGATGTCAGCATTGGCGGCCAGG...GGCCTCTGTGTTTGCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| 3UTR CAA 72 bp | AGCAGAAACAGCCAGACCTCCGCTGAATCAGCGGGATaGACCAGGACCGGCTGGGATGCCAAGCAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRNSQTSAESAG*TRTGWDAKQSS Trigger: AGAACTTTGCTTGGCATCCCAGCCGGTCCTGGTCAATCCCGCTGATTCAGCGGAGGTCTGGCTGTTTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR GCA 90 bp | GAATCAGCGGGATTGACCAGGACCGGCTGGGATGCCAAGCAAAGTTCTCTGTCGAGAGCTCGATTTTCATaGGACCAACTTCCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ESAGLTRTGWDAKQSSLSRARFS*DQLPGR Trigger: GCGGCCAGGAAGTTGGTCGCATGAAAATCGAGCTCT...CGACAGAGAACTTTGCTTGGCATCCCAGCCGGTCCTGGTCAATCCCGCTGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAATCGGCTCAAGTCTGAAGCAGCCAGAAGTCTCCAGAACACCACTAGCAGACCACTGTTTGCCATaGAAAGCAGGCCTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPIGSSLKQPEVSRTPLADHCLP*KAGLEQ Trigger: CTGCTCCAGGCCTGCTTTCCATGGCAAACAGTGGTC...TGCTAGTGGTGTTCTGGAGACTTCTGGCTGCTTCAGACTTGAGCCGATTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGAATGCGACCAACTTCCTaGCCGCCAATGCTGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: ASPACQTRERMSHQNSRGMRPTS*PPMLTS Trigger: CGATGTCAGCATTGGCGGCCAGGAAGTTGGTCGCAT...TCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCAGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAATGCGACCAACTTCCTaGCCGCCAATGCTGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: EASPACQTRERMSHQNSRMRPTS*PPMLTS Trigger: CGATGTCAGCATTGGCGGCCAGGAAGTTGGTCGCAT...TCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACTGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGAGACCACTGTTTGCCATaGAAAGCAGGCCTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASPACQTRERMSHQNSRGDHCLP*KAGLEQ Trigger: CTGCTCCAGGCCTGCTTTCCATGGCAAACAGTGGTC...TCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGAATCGCCAAGAGCTCTTGAAGTGGGAGCAGGTTGAGCCCAGGGGAATCGAACGCCATCTTTTCTaGACTCTCCGGTGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GKNRQELLKWEQVEPRGIERHLF*TLRCRI Trigger: AATTCTGCACCGGAGAGTTCAGAAAAGATGGCGTTC...GATTCCCCTGGGCTCAACCTGCTCCCACTTCAAGAGCTCTTGGCGATTCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGAAGAGCTCGATTTTCATaGGACCAACTTCCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASPACQTRERMSHQNSRGRARFS*DQLPGR Trigger: GCGGCCAGGAAGTTGGTCGCATGAAAATCGAGCTCT...TCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTCGTTTGTGATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAATGCGACCAACTTCCTaGCCGCCAATGCTGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: VLVCDTSRSWIAYCGDREMRPTS*PPMLTS Trigger: CGATGTCAGCATTGGCGGCCAGGAAGTTGGTCGCAT...TTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAACGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGACCTGGTTCGACCACTGTTTGCCATaGAAAGCAGGCCTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSDSRENVTPKQQRTWFDHCLP*KAGLEQ Trigger: CTGCTCCAGGCCTGCTTTCCATGGCAAACAGTGGTC...GAACCAGGTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106318.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGACCTAGAGCTCGATTTTCATaGGACCAACTTCCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPACQTRERMSHQNSRGPRARFS*DQLPGR Trigger: GCGGCCAGGAAGTTGGTCGCATGAAAATCGAGCTCT...AGGTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR TCA 90 bp | CTCGTTTGTGATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGCAGAACGCCATCTTTTCTaGACTCTCCGGTGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LVCDTSRSWIAYCGDREAERHLF*TLRCRI Trigger: AATTCTGCACCGGAGAGTTCAGAAAAGATGGCGTTC...TGCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAACGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGACCTGGTTCCGTCTAGAAGACCACTGGATTaGCTGGACTTGAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRLERECHTKTAEDLVPSRRPLD*LDLNLP Trigger: TGGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCT...AGACGGAACCAGGTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR TCA 90 bp | TCGTTTGTGATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGCAAGAACGCCATCTTTTCTaGACTCTCCGGTGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SFVILPGPGSHTVETGKQERHLF*TLRCRI Trigger: AATTCTGCACCGGAGAGTTCAGAAAAGATGGCGTTC...TTGCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGACCTGGTTGAACGCCATCTTTTCTaGACTCTCCGGTGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QLVRLERECHTKTAEDLVERHLF*TLRCRI Trigger: AATTCTGCACCGGAGAGTTCAGAAAAGATGGCGTTC...AACCAGGTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR GCA 90 bp | CTCGTTTGTGATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGCACTTAGGCACCACGTCTaGAAAGAGCTCGATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVCDTSRSWIAYCGDREALRHHV*KELDFH Trigger: ATGAAAATCGAGCTCTTTGCAGACGTGGTGCCTAAG...TGCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTAGTCAGGATAGCAAACATGAATTAGCAGCAATGGCACTACCCAGCAGAATGCGACCAACTTCCTaGCCGCCAATGCTGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: FSSQDSKHELAAMALPSRMRPTS*PPMLTS Trigger: CGATGTCAGCATTGGCGGCCAGGAAGTTGGTCGCAT...TCTGCTGGGTAGTGCCATTGCTGCTAATTCATGTTTGCTATCCTGACTACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR TCA 90 bp | GTTCTCGTTTGTGATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAAGAAGACCACTGGATTaGCTGGACTTGAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLVCDTSRSWIAYCGDRERRPLD*LDLNLP Trigger: TGGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCT...TTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAACGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR TCA 90 bp | GTTTGTGATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGCAAACAGAAGACCACTGGATTaGCTGGACTTGAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCDTSRSWIAYCGDREANRRPLD*LDLNLP Trigger: TGGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCT...GTTTGCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGACCTATTTTCATCCGCAAATaGACCCCGGTAAATACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPACQTRERMSHQNSRGPIFIRK*TPVNTG Trigger: GCCAGTATTTACCGGGGTCCATTTGCGGATGAAAAT...AGGTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAGGATAGCAAACATGAATTAGCAGCAATGGCACTACCCAGCAGAAACAGCGAACGCCATCTTTTCTaGACTCTCCGGTGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SQDSKHELAAMALPSRNSERHLF*TLRCRI Trigger: AATTCTGCACCGGAGAGTTCAGAAAAGATGGCGTTC...GCTGTTTCTGCTGGGTAGTGCCATTGCTGCTAATTCATGTTTGCTATCCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| 3UTR CAA 72 bp | GAGAGGCTCTGCTGTATGTGGTTTGGAAGAAGTTCCTaGGGGAGATTTCAATCTCCAATTGCCAGGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: ERLCCMWFGRSS*GRFQSPIARIP Trigger: TGGTATCCTGGCAATTGGAGATTGAAATCTCCCCAAGGAACTTCTTCCAAACCACATACAGCAGAGCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR GCA 90 bp | CTATCATCTAGTGATGATCAGGGGTCAGCTTATGAACTCTTCATTAGAGATATGAGAGCTCGATTTTCATaGGACCAACTTCCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSDDQGSAYELFIRDMRARFS*DQLPGR Trigger: GCGGCCAGGAAGTTGGTCGCATGAAAATCGAGCTCT...CATATCTCTAATGAAGAGTTCATAAGCTGACCCCTGATCATCACTAGATGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| CDS-3UTR CCA 90 bp | GCTTATGAACTCTTCATTAGAGATATGGAAGAAATGAGTGAGAACGGGAAAGAAGACCACTGTTTGCCATaGAAAGCAGGCCTGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AYELFIRDMEEMSENGKEDHCLP*KAGLEQ Trigger: CTGCTCCAGGCCTGCTTTCCATGGCAAACAGTGGTC...TTCTTTCCCGTTCTCACTCATTTCTTCCATATCTCTAATGAAGAGTTCATAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||
| 3UTR CAA 72 bp | GTTACGGGGGAGGTGGACTTGCTTAGAAATAGTTCTTaGGAGCAAATCCATCATCAGTTCACTTCACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTGEVDLLRNSS*EQIHHQFTSQE Trigger: TTCTTGTGAAGTGAACTGATGATGGATTTGCTCCAAAGAACTATTTCTAAGCAAGTCCACCTCCCCCGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGACTTGCTTAGAAATAGTTCTTTGGAGCAAATCCATCATCAGTTCACTAGAAGACCACTGGATTaGCTGGACTTGAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVDLLRNSSLEQIHHQFTRRPLD*LDLNLP Trigger: TGGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCT...AGTGAACTGATGATGGATTTGCTCCAAAGAACTATTTCTAAGCAAGTCCACCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR CAA 90 bp | GAATCAGCGGGATTGACCAGGACCGGCTGGGATGCCAAGCAAAGTTCTCTGTCGTGGAAGGTGCTTCCTTaGTATCCTATCGGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESAGLTRTGWDAKQSSLSWKVLP*YPIGTP Trigger: TGGCGTTCCGATAGGATACAAAGGAAGCACCTTCCA...CGACAGAGAACTTTGCTTGGCATCCCAGCCGGTCCTGGTCAATCCCGCTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGCAAACACAGAGGCCATGGAAGGTGCTTCCTTaGTATCCTATCGGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGPGSHTVETGKQTQRPWKVLP*YPIGTP Trigger: TGGCGTTCCGATAGGATACAAAGGAAGCACCTTCCA...TGGCCTCTGTGTTTGCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGACCTCTCCGGTGCAGAATaGCCTAAAGTTCTCTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PVQLVRLERECHTKTAEDLSGAE*PKVLCR Trigger: ACGGCAGAGAACTTTAGGCAATTCTGCACCGGAGAG...GTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CAA 90 bp | GATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGCAAACACAGAGTGGAAGGTGCTTCCTTaGTATCCTATCGGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DTSRSWIAYCGDREANTEWKVLP*YPIGTP Trigger: TGGCGTTCCGATAGGATACAAAGGAAGCACCTTCCA...CTCTGTGTTTGCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGACCTTGGAAGGTGCTTCCTTaGTATCCTATCGGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPACQTRERMSHQNSRGPWKVLP*YPIGTP Trigger: TGGCGTTCCGATAGGATACAAAGGAAGCACCTTCCA...AGGTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CAA 90 bp | GATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAGCAAACACAGAGAAGAAGACCACTGGATaGACTGGACTTGAATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DTSRSWIAYCGDREANTEKKTTG*TGLEFA Trigger: GGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCTT...CTCTGTGTTTGCTTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCAGCTTGTCAGACTCGAGAGAGAATGTCACACCAAAACAGCAGAGGACAAGAAGACCACTGGATaGACTGGACTTGAATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVQLVRLERECHTKTAEDKKTTG*TGLEFA Trigger: GGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCTT...GTCCTCTGCTGTTTTGGTGTGACATTCTCTCTCGAGTCTGACAAGCTGGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTCGTTTGTGATACTTCCAGGTCCTGGATCGCATACTGTGGAGACAGGGAAAAGAAGACCACTGGATaGACTGGACTTGAATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLVCDTSRSWIAYCGDREKKTTG*TGLEFA Trigger: GGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCTT...TTCCCTGTCTCCACAGTATGCGATCCAGGACCTGGAAGTATCACAAACGAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056458.14 ENSMUST00000106318.8 ENSMUST00000106319.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTGCCAATCGGCTCAAGTCTGAAGCAGCCAGAAGTCTCCAGAACACCACTAAAGAAGACCACTGGATaGACTGGACTTGAATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILPIGSSLKQPEVSRTPLKKTTG*TGLEFA Trigger: GGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCTT...TAGTGGTGTTCTGGAGACTTCTGGCTGCTTCAGACTTGAGCCGATTGGCAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106321.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTATGAACTCTTCATTAGAGATATGGAAGAAATGAGTGAGAACGGGAAATGGAAGGTGCTTCCTTaGTATCCTATCGGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAYELFIRDMEEMSENGKWKVLP*YPIGTP Trigger: TGGCGTTCCGATAGGATACAAAGGAAGCACCTTCCA...TTTCCCGTTCTCACTCATTTCTTCCATATCTCTAATGAAGAGTTCATAAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147077.8 |
||