Pregenerated sensors for PPIG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042133Ensembl transcript IDs: ENSMUST00000040915.15, ENSMUST00000090858.10
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACAAAGCAGGAGTTGGGGGAGCCCGTAAATGCTCAGCTCTGAGCTaGTCTCTTGGAGGATATTACAGACATTACCAATTTTCTCCCATG | + |
|
Preference number: 1 (lower is better) Translates to: NKAGVGGARKCSALS*SLGGYYRHYQFSPM Trigger: CATGGGAGAAAATTGGTAATGTCTGTAATATCCTCCAAGAGAGCAGCTCAGAGCTGAGCATTTACGGGCTCCCCCAACTCCTGCTTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR TCA 90 bp | TTCTGTCAAATGCTGTATAACAGCAACTCAAGCTCAATCAGCACATaGACTGAAAACAGCACTCACCTCATTTTTATAGCTCGCAGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: FCQMLYNSNSSSIST*TENSTHLIFIARRA Trigger: TGCTCTGCGAGCTATAAAAATGAGGTGAGTGCTGTTTTCAGTTCATGTGCTGATTGAGCTTGAGTTGCTGTTATACAGCATTTGACAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR GCA 90 bp | TCACAAACATGCTACACAGCCTATCATGGTACATATATAGAAAGATaGATCTTCTTGACATTTCATATTCACAGCTATGAGAATCAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: SQTCYTAYHGTYIER*IFLTFHIHSYENQR Trigger: TCTCTGATTCTCATAGCTGTGAATATGAAATGTCAAGAAGATGCATCTTTCTATATATGTACCATGATAGGCTGTGTAGCATGTTTGTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCATTGTTTCCAAATGGCTaGTTAAGCAAAGTAGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: KPMNALPSSSTRGESGRALFPNG*LSKVGC Trigger: GCAGCCTACTTTGCTTAATCAGCCATTTGGAAACAA...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CCA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCAGATAACTGTGAATCTTaGGGTACAATTAATGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: KPMNALPSSSTRGESGRADNCES*GTINAV Trigger: AACAGCATTAATTGTACCCCAAGATTCACAGTTATC...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACAGCTCAATCAGCACATaGACTGAAAACAGCACTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYSSIST*TENSTH Trigger: GTGAGTGCTGTTTTCAGTTCATGTGCTGATTGAGCT...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTTTGTTTCCAAATGGCTaGTTAAGCAAAGTAGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLLFPNG*LSKVGC Trigger: GCAGCCTACTTTGCTTAATCAGCCATTTGGAAACAA...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACAATCAGCACATGAACTaGAAACAGCACTCACCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYNQHMN*KQHSPH Trigger: ATGAGGTGAGTGCTGTTTTCAGTTCATGTGCTGATT...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTGCTCGCAGAGCAACGTaGACAATATTAAGAAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: ITQNTRTPACAYPEHKGSARRAT*TILRNK Trigger: CTTGTTTCTTAATATTGTCCACGTTGCTCTGCGAGC...AGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGAATCAGCACATGAACTaGAAACAGCACTCACCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: FPDSLVFTASNHSVSATMNQHMN*KQHSPH Trigger: ATGAGGTGAGTGCTGTTTTCAGTTCATGTGCTGATT...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAGTAAATGCTCAGCTCTaGGCTGCTCTCTTGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVVNAQL*AALLED Trigger: ATCCTCCAAGAGAGCAGCTCAGAGCTGAGCATTTAC...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACTCTGAGCTGCTCTCTTaGAGGATATTACAGACATTA | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYSELLS*RILQTL Trigger: TAATGTCTGTAATATCCTCCAAGAGAGCAGCTCAGA...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTCTGAGCTGCTCTCTTaGAGGATATTACAGACATTA | + |
|
Preference number: 2 (lower is better) Translates to: ITQNTRTPACAYPEHKGSSELLS*RILQTL Trigger: TAATGTCTGTAATATCCTCCAAGAGAGCAGCTCAGA...AGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTTCATATTCACAGCTATaGGAATCAGAGAAGTTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLSYSQL*ESEKLV Trigger: GACTAACTTCTCTGATTCTCATAGCTGTGAATATGA...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACTCATATTCACAGCTATaGGAATCAGAGAAGTTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYSYSQL*ESEKLV Trigger: GACTAACTTCTCTGATTCTCATAGCTGTGAATATGA...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | ATTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTGAAATATTTCTCAAATaGGGCAGGTTTTGTGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: ITQNTRTPACAYPEHKGSEIFLK*GRFCVC Trigger: GCAAACACAAAACCTGCCTCATTTGAGAAATATTTC...AGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACGAAATATTTCTCAAATaGGGCAGGTTTTGTGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYEIFLK*GRFCVC Trigger: GCAAACACAAAACCTGCCTCATTTGAGAAATATTTC...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACCAGTACAAATATCATTaGAAAGCTAGTGGGTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYQYKYH*KASGFT Trigger: GGTAAACCCACTAGCTTTTCAATGATATTTGTACTG...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR GCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACGCTGCTATTGACGGTTaGAACACAAAAATGAATACA | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYAAIDG*NTKMNT Trigger: TGTATTCATTTTTGTGTTGCAACCGTCAATAGCAGC...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR GCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACGGCAGGTTTTGTGTTTaGTGGATGTTCAATGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYGRFCV*WMFNVL Trigger: TAAAACATTGAACATCCAGCAAACACAAAACCTGCC...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR GCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTATGCTCAGCTCTGAGCTaGTCTCTTGGAGGATATTAC | + |
|
Preference number: 2 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVCSALS*SLGGYY Trigger: GTAATATCCTCCAAGAGAGCAGCTCAGAGCTGAGCA...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACAAGCTTGTTTCCAAATaGCTGATTAAGCAAAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYKLVSK*LIKQSR Trigger: CCTACTTTGCTTAATCAGCCATTTGGAAACAAGCTT...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR GCA 90 bp | ATTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTATACAACAATGTACTaGAACCAACAGTTAAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ITQNTRTPACAYPEHKGSYTTMY*NQQLSL Trigger: CAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATA...AGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR GCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACTATACAACAATGTACTaGAACCAACAGTTAAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYYTTMY*NQQLSL Trigger: CAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATA...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR GCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACCTGTACCAGCTACAATaGCAAATATATCTTACCATA | + |
|
Preference number: 2 (lower is better) Translates to: NQNQTEIQTNECPSILQYLYQLQ*QIYLTI Trigger: TATGGTAAGATATATTTGGCATTGTAGCTGGTACAG...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGGATAACTGTGAATCTTaGGGTACAATTAATGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FPDSLVFTASNHSVSATMDNCES*GTINAV Trigger: AACAGCATTAATTGTACCCCAAGATTCACAGTTATC...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR TCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTACAGTACAAATATCATTaGAAAGCTAGTGGGTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVQYKYH*KASGFT Trigger: GGTAAACCCACTAGCTTTTCAATGATATTTGTACTG...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAAAGCTTGTTTCCAAATaGCTGATTAAGCAAAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVKLVSK*LIKQSR Trigger: CCTACTTTGCTTAATCAGCCATTTGGAAACAAGCTT...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATCTAACAAAGCAGGAGTaGGGGGAGCCCGTAAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: AGESLQDIEKPTAGSNGNLTKQE*GEPVNA Trigger: AGCATTTACGGGCTCCCCCAACTCCTGCTTTGTTAG...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR GCA 72 bp | CAAACTAACAAAGCAGGAGTTGGGGGAGCCCGTAAATaGTCAGCTCTGAGCTGCTCTCTTGGAGGATATTAC | + |
|
Preference number: 3 (lower is better) Translates to: QTNKAGVGGARK*SALSCSLGGYY Trigger: GTAATATCCTCCAAGAGAGCAGCTCAGAGCTGAGCATTTACGGGCTCCCCCAACTCCTGCTTTGTTAGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CAA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTCTAACAAAGCAGGAGTaGGGGGAGCCCGTAAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLLTKQE*GEPVNA Trigger: AGCATTTACGGGCTCCCCCAACTCCTGCTTTGTTAG...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTGTTCCCAGACAGTCTaGTCTTTACAGCAAGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: ITQNTRTPACAYPEHKGSCSQTV*SLQQVT Trigger: GGTTACTTGCTGTAAAGACAAGACTGTCTGGGAACA...AGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR CCA 72 bp | AGCACTCACCTCATTTTTATAGCTCGCAGAGCAACGTaGACAATATTAAGAAACAAGCTACAGCTGGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: STHLIFIARRAT*TILRNKLQLEL Trigger: CAATTCCAGCTGTAGCTTGTTTCTTAATATTGTCCACGTTGCTCTGCGAGCTATAAAAATGAGGTGAGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGCAAATGAGGCAGGTTTaGTGTTTGCTGGATGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FPDSLVFTASNHSVSATMQMRQV*CLLDVQ Trigger: TTGAACATCCAGCAAACACAAAACCTGCCTCATTTG...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGTACCAAGAAGCTACCTaGGTAAGAGCTGACACTATA | + |
|
Preference number: 3 (lower is better) Translates to: FPDSLVFTASNHSVSATMYQEAT*VRADTI Trigger: TATAGTGTCAGCTCTTACCAAGGTAGCTTCTTGGTA...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CAA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTGAAAGATGCATCTTCTaGACATTTCATATTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLERCIF*TFHIHS Trigger: GCTGTGAATATGAAATGTCAAGAAGATGCATCTTTC...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR CCA 72 bp | AATGTACTGCAACCAACAGTTAAGCTTGTTTCCAAATaGCTGATTAAGCAAAGTAGGCTGCTATTGACGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NVLQPTVKLVSK*LIKQSRLLLTV Trigger: AACCGTCAATAGCAGCCTACTTTGCTTAATCAGCCATTTGGAAACAAGCTTAACTGTTGGTTGCAGTACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTACAAATGAGGCAGGTTTaGTGTTTGCTGGATGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVQMRQV*CLLDVQ Trigger: TTGAACATCCAGCAAACACAAAACCTGCCTCATTTG...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR GCA 72 bp | AGCCATCTGAATAGAAAGAAACCAGAGTCACAAACATaGTACACAGCCTATCATGGTACATATATAGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHLNRKKPESQT*YTAYHGTYIER Trigger: TCTTTCTATATATGTACCATGATAGGCTGTGTAGCATGTTTGTGACTCTGGTTTCTTTCTATTCAGATGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR CCA 72 bp | GAAACCAGAGTCACAAACATGCTACACAGCCTATCATaGTACATATATAGAAAGATGCATCTTCTTGACATT | + |
|
Preference number: 3 (lower is better) Translates to: ETRVTNMLHSLS*YIYRKMHLLDI Trigger: AATGTCAAGAAGATGCATCTTTCTATATATGTACCATGATAGGCTGTGTAGCATGTTTGTGACTCTGGTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAGAAAGATGCATCTTCTaGACATTTCATATTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVERCIF*TFHIHS Trigger: GCTGTGAATATGAAATGTCAAGAAGATGCATCTTTC...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCATGGACCGCACTCTTCTaGTCCTGTCCCTACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPMNALPSSSTRGESGRAWTALF*SCPYFC Trigger: GCAGAAGTAGGGACAGGAGCAGAAGAGTGCGGTCCA...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCACTGCGATCTCTGTCGTaGCTTCTGGACCGCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPMNALPSSSTRGESGRALRSLS*LLDRTL Trigger: AAGAGTGCGGTCCAGAAGCCACGACAGAGATCGCAG...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATTCTCTCACAACTTCCTaGCCAGAGATCACTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGESLQDIEKPTAGSNGNSLTTS*PEITCP Trigger: TGGGCAAGTGATCTCTGGTCAGGAAGTTGTGAGAGA...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATGACACCCTCATTCTCTaGGCTCTCTGCATCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGESLQDIEKPTAGSNGNDTLIL*ALCISC Trigger: ACAAGAGATGCAGAGAGCTCAGAGAATGAGGGTGTC...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCATCTTGGATCTCTCCTTaGTCTTGCTCCTACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPMNALPSSSTRGESGRASWISP*SCSYSW Trigger: CCAAGAGTAGGAGCAAGAGCAAGGAGAGATCCAAGA...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATTCTTGGATCTCTCCTTaGTCTTGCTCCTACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGESLQDIEKPTAGSNGNSWISP*SCSYSW Trigger: CCAAGAGTAGGAGCAAGAGCAAGGAGAGATCCAAGA...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCAAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPMNALPSSSTRGESGRARLGVR*ITLSFS Trigger: AGAGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATTCCCTTTTTCACCTGTaGAAAGGCAGCGAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGESLQDIEKPTAGSNGNSLFHL*KGSESS Trigger: AGAACTTTCGCTGCCTTTGCACAGGTGAAAAAGGGA...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATAGTAGACTGGGGCTGTaGATCAACATTTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGESLQDIEKPTAGSNGNSRLGL*INIFCF Trigger: GAAGCAGAAAATGTTGATGCACAGCCCCAGTCTACT...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATATCTCTCCTTGCTCTTaGTCCTACTCTTGGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGESLQDIEKPTAGSNGNISPCS*SYSWIC Trigger: GCAAATCCAAGAGTAGGAGCAAGAGCAAGGAGAGAT...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATGCTTTGCTTTGTTTTTaGCACTGGACTTTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGESLQDIEKPTAGSNGNALLCF*HWTLLS Trigger: AGAGAGCAAAGTCCAGTGTCAAAAACAAAGCAAAGC...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCAGAGGACGAGGACTTATaGCTTTTCTTTTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPMNALPSSSTRGESGRAEDEDL*LFFSSF Trigger: GAAAGAAGAAAAGAAAAGGCATAAGTCCTCGTCCTC...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACTCTCTCACAACTTCCTaGCCAGAGATCACTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQNQTEIQTNECPSILQYSLTTS*PEITCP Trigger: TGGGCAAGTGATCTCTGGTCAGGAAGTTGTGAGAGA...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGTCGATCCCGGCTTCGTaGCCTTCCTCTTCTCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: FPDSLVFTASNHSVSATMSIPAS*PSSSPI Trigger: TATAGGAGAAGAGGAAGGTCACGAAGCCGGGATCGA...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATGAGGACGAGGACTTATaGCTTTTCTTTTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGESLQDIEKPTAGSNGNEDEDL*LFFSSF Trigger: GAAAGAAGAAAAGAAAAGGCATAAGTCCTCGTCCTC...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTGGACGGACAGTAGACTaGGGCTGTGCATCAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLGRTVD*GCASTF Trigger: AAATGTTGATGCACAGCCCCAGTCTACTGTCCGTCC...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTCTCGCTCCTTACTCTTaGATCTCTCCTTGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLLAPYS*ISPCSC Trigger: GCAAGAGCAAGGAGAGATCCAAGAGTAAGGAGCGAG...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTATGGACCGCACTCTTCTaGTCCTGTCCCTACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVWTALF*SCPYFC Trigger: GCAGAAGTAGGGACAGGAGCAGAAGAGTGCGGTCCA...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | ATTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITQNTRTPACAYPEHKGSIYGTP*FCCDLC Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...AGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACATCTATGGTACTCCTTaGTTCTGCTGCGATCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NQNQTEIQTNECPSILQYIYGTP*FCCDLC Trigger: ACAGAGATCGCAGCAGAAGCAAGGAGTACCATAGAT...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTACTGCGATCTCTGTCGTaGCTTCTGGACCGCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVLRSLS*LLDRTL Trigger: AAGAGTGCGGTCCAGAAGCCACGACAGAGATCGCAG...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTATCGATCCCGGCTTCGTaGCCTTCCTCTTCTCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVSIPAS*PSSSPI Trigger: TATAGGAGAAGAGGAAGGTCACGAAGCCGGGATCGA...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACGCTTTGCTTTGTTTTTaGCACTGGACTTTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQNQTEIQTNECPSILQYALLCF*HWTLLS Trigger: AGAGAGCAAAGTCCAGTGTCAAAAACAAAGCAAAGC...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGATCTCTCCTTGCTCTTaGTCCTACTCTTGGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPDSLVFTASNHSVSATMISPCS*SYSWIC Trigger: GCAAATCCAAGAGTAGGAGCAAGAGCAAGGAGAGAT...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGAGGCTGGGAGTTAGGTaGATTACACTCTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPDSLVFTASNHSVSATMRLGVR*ITLSFS Trigger: AGAGAAAGAGAGTGTAATCCACCTAACTCCCAGCCT...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTTATCCTTCCCTCTGTTaGCCATTGATAAGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLYPSLC*PLIRET Trigger: AGTTTCTCTTATCAATGGCCAACAGAGGGAAGGATA...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTACTCGCTCCTTACTCTTaGATCTCTCCTTGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVLAPYS*ISPCSC Trigger: GCAAGAGCAAGGAGAGATCCAAGAGTAAGGAGCGAG...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGACTCTTCCAGCAGGTTaGTTATTAATGGCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPDSLVFTASNHSVSATMTLPAG*LLMAMS Trigger: TGACATTGCCATTAATAATCAACCTGCTGGAAGAGT...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACTGCATCAACATTTTCTaGTTCACTTTCACTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: NQNQTEIQTNECPSILQYCINIF*FTFTRW Trigger: CCATCTAGTGAAAGTGAAGCAGAAAATGTTGATGCA...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACAGTTCTCACACGTTTTaGGACATACATCGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NQNQTEIQTNECPSILQYSSHTF*DIHRKI Trigger: TATTTTCCGATGTATGTCCCAAAACGTGTGAGAACT...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACTTCTACTTTTCTGTTTaGACTCTCAGACATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQNQTEIQTNECPSILQYFYFSV*TLRHVS Trigger: AGACACATGTCTGAGAGTCCAAACAGAAAAGTAGAA...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTATCCCTTTTTCACCTGTaGAAAGGCAGCGAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVSLFHL*KGSESS Trigger: AGAACTTTCGCTGCCTTTGCACAGGTGAAAAAGGGA...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR GCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAAGTAGACTGGGGCTGTaGATCAACATTTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVSRLGL*INIFCF Trigger: GAAGCAGAAAATGTTGATGCACAGCCCCAGTCTACT...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AGAAACACAAGCCTATACAACAATGTACTGCAACCAACAGTTAAGCTTGTTTCCAGTTCTCACACGTTTTaGGACATACATCGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RNTSLYNNVLQPTVKLVSSSHTF*DIHRKI Trigger: TATTTTCCGATGTATGTCCCAAAACGTGTGAGAACT...GGAAACAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATAGGCTTGTGTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR TCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAACTCTTCCAGCAGGTTaGTTATTAATGGCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVTLPAG*LLMAMS Trigger: TGACATTGCCATTAATAATCAACCTGCTGGAAGAGT...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTATATCCTTCCCTCTGTTaGCCATTGATAAGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVYPSLC*PLIRET Trigger: AGTTTCTCTTATCAATGGCCAACAGAGGGAAGGATA...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CCA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTATTCTACTTTTCTGTTTaGACTCTCAGACATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVFYFSV*TLRHVS Trigger: AGACACATGTCTGAGAGTCCAAACAGAAAAGTAGAA...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCACTTGACCTCACCCTCTaGTCTTCGTGTCTGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KPMNALPSSSTRGESGRALDLTL*SSCLLC Trigger: GCACAGCAGACACGAAGACAAGAGGGTGAGGTCAAG...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATAGGACTGAGAATCGCTaGAGCTGTCTGAGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGESLQDIEKPTAGSNGNRTENR*SCLSHW Trigger: CCAGTGACTCAGACAGCTCAAGCGATTCTCAGTCCT...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS GCA 90 bp | GATCCCTTTCTTTACTTCTTGACCTCACCCTCTTGTCTTCGTGTCTaGTGTGCTTCGAGTCTCGCTCCTTACTCTTGGATCTCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DPFLYFLTSPSCLRV*CASSLAPYSWISPC Trigger: GCAAGGAGAGATCCAAGAGTAAGGAGCGAGACTCGAAGCACAGCAGACACGAAGACAAGAGGGTGAGGTCAAGAAGTAAAGAAAGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS CCA 90 bp | TCTTGTCTTCGTGTCTGCTGTGCTTCGAGTCTCGCTCCTTACTCTTaGATCTCTCCTTGCTCTTGCTCCTACTCTTGGATTTGCCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCLRVCCASSLAPYS*ISPCSCSYSWICPF Trigger: AAAGGGGCAAATCCAAGAGTAGGAGCAAGAGCAAGGAGAGATCCAAGAGTAAGGAGCGAGACTCGAAGCACAGCAGACACGAAGACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATAGCTCTCTGCATCTCTaGTCTCCAATGTGGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGESLQDIEKPTAGSNGNSSLHL*SPMWRS Trigger: ACTCCTCCACATTGGAGACAAGAGATGCAGAGAGCT...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCATTCTGCTCCGCTCCCTaGTTCTACTGTTGTAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: KPMNALPSSSTRGESGRAFCSAP*FYCCNC Trigger: ACAGTTACAACAGTAGAACAAGGGAGCGGAGCAGAA...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS CCA 90 bp | AAGACTCAGAGGAGGACTGAGAATCGCTTGAGCTGTCTGAGTCACTaGAGGAGGAGGAGGACGAGGACTTATGCCTTTTCTTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTQRRTENRLSCLSH*RRRRTRTYAFSFLL Trigger: AAGAAGAAAAGAAAAGGCATAAGTCCTCGTCCTCCTCCTCCTCCAGTGACTCAGACAGCTCAAGCGATTCTCAGTCCTCCTCTGAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATGATCTCTCCTTGCTCTaGCTCCTACTCTTGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGESLQDIEKPTAGSNGNDLSLL*LLLLDL Trigger: CAAATCCAAGAGTAGGAGCAAGAGCAAGGAGAGATC...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATACTTCAGCAAATGGTTaGCTAGCGGCATCTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGESLQDIEKPTAGSNGNTSANG*LAASVF Trigger: GAAAACAGATGCCGCTAGCAAACCATTTGCTGAAGT...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCAAACTCTTCCAGCAGGTaGATTATTAATGGCAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KPMNALPSSSTRGESGRANSSSR*IINGNV Trigger: GACATTGCCATTAATAATCAACCTGCTGGAAGAGTT...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AAACCAATGAATGCCCTTCCATCCTCCAGTACTAGGGGTGAGTCAGGGAGAGCACATCTGTTCCAGGGCTaGATTCATGATCACATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KPMNALPSSSTRGESGRAHLFQG*IHDHIF Trigger: AAAAATGTGATCATGAATCAAGCCCTGGAACAGATG...TGCTCTCCCTGACTCACCCCTAGTACTGGAGGATGGAAGGGCATTCATTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTAGCTCTCTGCATCTCTaGTCTCCAATGTGGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLSSLHL*SPMWRS Trigger: ACTCCTCCACATTGGAGACAAGAGATGCAGAGAGCT...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATTTTCTACTTTTCTGTTaGGACTCTCAGACATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGESLQDIEKPTAGSNGNFLLFC*DSQTCV Trigger: GACACATGTCTGAGAGTCCAAACAGAAAAGTAGAAA...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATCTGATGTCTCTCTCTTaGCTTTCAGATTTATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGESLQDIEKPTAGSNGNLMSLS*LSDLWS Trigger: AGACCATAAATCTGAAAGCAAAGAGAGAGACATCAG...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTAGAACTGAGAGCCATTaGTATCCTTCCCTCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLRTESH*YPSLCW Trigger: CCAACAGAGGGAAGGATACAAATGGCTCTCAGTTCT...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTCTCTTGCTCCTACTCTaGGATTTGCCCCTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLLLLLL*DLPLFF Trigger: GAAGAAAAGGGGCAAATCCAAGAGTAGGAGCAAGAG...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGAATCCCTTCAAGACATTGAGAAGCCCACTGCAGGCAGTAATGGCAATTTTGATTCTACCTGTTaGGAGTTCTCTTTGCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGESLQDIEKPTAGSNGNFDSTC*EFSLLL Trigger: TAGAAGCAAAGAGAACTCCAAACAGGTAGAATCAAA...ATTGCCATTACTGCCTGCAGTGGGCTTCTCAATGTCTTGAAGGGATTCACCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTTTCTGCTCCGCTCCCTaGTTCTACTGTTGTAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLFCSAP*FYCCNC Trigger: ACAGTTACAACAGTAGAACAAGGGAGCGGAGCAGAA...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTACTTGACCTCACCCTCTaGTCTTCGTGTCTGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVLDLTL*SSCLLC Trigger: GCACAGCAGACACGAAGACAAGAGGGTGAGGTCAAG...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | ATTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTCCCTTTCTTTACTTCTaGACCTCACCCTCTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ITQNTRTPACAYPEHKGSPFLYF*TSPSCL Trigger: AAGACAAGAGGGTGAGGTCAAGAAGTAAAGAAAGGG...AGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTGTAATGGCTTCTGAGTaGATTTCCCTGTCCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLVMASE*ISLSLF Trigger: AAAAAGGGACAGGGAAATCAACTCAGAAGCCATTAC...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAAGGACTGAGAATCGCTaGAGCTGTCTGAGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVRTENR*SCLSHW Trigger: CCAGTGACTCAGACAGCTCAAGCGATTCTCAGTCCT...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGAAACACAAGCCTATACAACAATGTACTGCAACCAACAGTTAAGCTTGTTTCCCTCTTGCTCCTACTCTaGGATTTGCCCCTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNTSLYNNVLQPTVKLVSLLLLL*DLPLFF Trigger: GAAGAAAAGGGGCAAATCCAAGAGTAGGAGCAAGAG...GGAAACAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATAGGCTTGTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGAAACACAAGCCTATACAACAATGTACTGCAACCAACAGTTAAGCTTGTTTCCGATCTCTCCTTGCTCTaGCTCCTACTCTTGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNTSLYNNVLQPTVKLVSDLSLL*LLLLDL Trigger: CAAATCCAAGAGTAGGAGCAAGAGCAAGGAGAGATC...GGAAACAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATAGGCTTGTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AACCAAAACCAGACAGAAATACAAACCAATGAATGCCCTTCCATCCTCCAGTACTGCTTTGCTTTGTTTTaGACACTGGACTTTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NQNQTEIQTNECPSILQYCFALF*TLDFAL Trigger: GAGAGCAAAGTCCAGTGTCAAAAACAAAGCAAAGCA...GTACTGGAGGATGGAAGGGCATTCATTGGTTTGTATTTCTGTCTGGTTTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | TTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTCCTGACTGCTTTGCTTaGTTTTTGACACTGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPKIPEPQHVPIQNIKVLPDCFA*FLTLDF Trigger: AAAGTCCAGTGTCAAAAACAAAGCAAAGCAGTCAGG...AAGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGAAACACAAGCCTATACAACAATGTACTGCAACCAACAGTTAAGCTTGTTTCCGTATCCTTCCCTCTGTaGGCCATTGATAAGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RNTSLYNNVLQPTVKLVSVSFPL*AIDKRN Trigger: GTTTCTCTTATCAATGGCCAACAGAGGGAAGGATAC...GGAAACAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATAGGCTTGTGTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | ATTACCCAAAATACCAGAACCCCAGCATGTGCCTATCCAGAACATAAAGGTTCTTTTCTACTTTTCTGTTaGGACTCTCAGACATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ITQNTRTPACAYPEHKGSFLLFC*DSQTCV Trigger: GACACATGTCTGAGAGTCCAAACAGAAAAGTAGAAA...AGAACCTTTATGTTCTGGATAGGCACATGCTGGGGTTCTGGTATTTTGGGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTATCTCGCTCCTTACTCTaGGATCTCTCCTTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVSRSLL*DLSLLL Trigger: CAAGAGCAAGGAGAGATCCAAGAGTAAGGAGCGAGA...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGTGCTTTGCTTTGTTTTaGACACTGGACTTTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPDSLVFTASNHSVSATMCFALF*TLDFAL Trigger: GAGAGCAAAGTCCAGTGTCAAAAACAAAGCAAAGCA...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGACAGTCTTGTCTTTACAGCAAGTAACCATTCTGTATCAGCTACAATGAACTCTTCCAGCAGGTaGATTATTAATGGCAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPDSLVFTASNHSVSATMNSSSR*IINGNV Trigger: GACATTGCCATTAATAATCAACCTGCTGGAAGAGTT...CATTGTAGCTGATACAGAATGGTTACTTGCTGTAAAGACAAGACTGTCTGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAAGAACTGAGAGCCATTaGTATCCTTCCCTCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVRTESH*YPSLCW Trigger: CCAACAGAGGGAAGGATACAAATGGCTCTCAGTTCT...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGAAACACAAGCCTATACAACAATGTACTGCAACCAACAGTTAAGCTTGTTTCCCTAGATGGGCTTTTCTaGCTTTTCTTTCGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNTSLYNNVLQPTVKLVSLDGLF*LFFRFF Trigger: GAAGAAGCGAAAGAAAAGCAAGAAAAGCCCATCTAG...GGAAACAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATAGGCTTGTGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGAAACACAAGCCTATACAACAATGTACTGCAACCAACAGTTAAGCTTGTTTCCCCTGACTGCTTTGCTTaGTTTTTGACACTGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: RNTSLYNNVLQPTVKLVSPDCFA*FLTLDF Trigger: AAAGTCCAGTGTCAAAAACAAAGCAAAGCAGTCAGG...GGAAACAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATAGGCTTGTGTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAGTATCCTTCCCTCTGTaGGCCATTGATAAGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVVSFPL*AIDKRN Trigger: GTTTCTCTTATCAATGGCCAACAGAGGGAAGGATAC...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTAACTTCAGCAAATGGTTaGCTAGCGGCATCTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVTSANG*LAASVF Trigger: GAAAACAGATGCCGCTAGCAAACCATTTGCTGAAGT...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGAAACACAAGCCTATACAACAATGTACTGCAACCAACAGTTAAGCTTGTTTCCCTGATGTCTCTCTCTTaGCTTTCAGATTTATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RNTSLYNNVLQPTVKLVSLMSLS*LSDLWS Trigger: AGACCATAAATCTGAAAGCAAAGAGAGAGACATCAG...GGAAACAAGCTTAACTGTTGGTTGCAGTACATTGTTGTATAGGCTTGTGTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS-3UTR CAA 90 bp | AGCTACAATGCAGTACAATACAGTAGCTTTACTTTCTCTAACGATCTCTTTGTATTTGATTCTACCTGTTaGGAGTTCTCTTTGCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SYNAVQYSSFTFSNDLFVFDSTC*EFSLLL Trigger: TAGAAGCAAAGAGAACTCCAAACAGGTAGAATCAAA...TACAAAGAGATCGTTAGAGAAAGTAAAGCTACTGTATTGTACTGCATTGTAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS CAA 72 bp | CAGAATCAGAAGACTCAGAGGAGGACTGAGAATCGCTaGAGCTGTCTGAGTCACTGGAGGAGGAGGAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: QNQKTQRRTENR*SCLSHWRRRRT Trigger: CGTCCTCCTCCTCCTCCAGTGACTCAGACAGCTCAAGCGATTCTCAGTCCTCCTCTGAGTCTTCTGATTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS CAA 90 bp | AAGCGCTTTCAGAATCAGAAGACTCAGAGGAGGACTGAGAATCGCTaGAGCTGTCTGAGTCACTGGAGGAGGAGGAGGACGAGGACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: KRFQNQKTQRRTENR*SCLSHWRRRRTRTY Trigger: ATAAGTCCTCGTCCTCCTCCTCCTCCAGTGACTCAGACAGCTCAAGCGATTCTCAGTCCTCCTCTGAGTCTTCTGATTCTGAAAGCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS GCA 72 bp | TTCTGGACCGCACTCTTCTGCTCCTGTCCCTACTTCTaGTCCGCTCCCTTGTTCTACTGTTGTAACTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FWTALFCSCPYF*SAPLFYCCNCV Trigger: AACACAGTTACAACAGTAGAACAAGGGAGCGGAGCAGAAGTAGGGACAGGAGCAGAAGAGTGCGGTCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS CCA 72 bp | CGTGTCTGCTGTGCTTCGAGTCTCGCTCCTTACTCTTaGATCTCTCCTTGCTCTTGCTCCTACTCTTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: RVCCASSLAPYS*ISPCSCSYSWI Trigger: AATCCAAGAGTAGGAGCAAGAGCAAGGAGAGATCCAAGAGTAAGGAGCGAGACTCGAAGCACAGCAGACACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||
| CDS CAA 72 bp | TCGTGTCTGCTGTGCTTCGAGTCTCGCTCCTTACTCTaGGATCTCTCCTTGCTCTTGCTCCTACTCTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SCLLCFESRSLL*DLSLLLLLLLD Trigger: ATCCAAGAGTAGGAGCAAGAGCAAGGAGAGATCCAAGAGTAAGGAGCGAGACTCGAAGCACAGCAGACACGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040915.15 ENSMUST00000090858.10 |
||