Pregenerated sensors for PPIF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021868Ensembl transcript IDs: ENSMUST00000022419.7
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGGGTACATGGCCCGATGGCCATACTGATGCCCAGAAACGGGATCTaGGGCAGGATGGACAGTGGAGAGCAGCCTGGTCTGGGAGGACCA | + |
Preference number: 1 (lower is better) Translates to: RVHGPMAILMPRNGI*GRMDSGEQPGLGGP Trigger: TGGTCCTCCCAGACCAGGCTGCTCTCCACTGTCCATCCTGCCTCAGATCCCGTTTCTGGGCATCAGTATGGCCATCGGGCCATGTACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR GCA 90 bp | TGGGGGTGTCTGTGGCTTGTGCCAACTCAGGTCACACATGGACAGTaGCGTGAGTGTCACAGCAACACAGGTCACACACGGACAGTGCCA | + |
Preference number: 1 (lower is better) Translates to: WGCLWLVPTQVTHGQ*RECHSNTGHTRTVP Trigger: TGGCACTGTCCGTGTGTGACCTGTGTTGCTGTGACACTCACGGCACTGTCCATGTGTGACCTGAGTTGGCACAAGCCACAGACACCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 90 bp | GCAGGATGGACAGTGGAGAGCAGCCTGGTCTGGGAGGACCATGCCTaGGTGGCCTTCCTCAGACTCAATAGAAGTGGGTGCAAACTGTTC | + |
Preference number: 1 (lower is better) Translates to: AGWTVESSLVWEDHA*VAFLRLNRSGCKLF Trigger: GAACAGTTTGCACCCACTTCTATTGAGTCTGAGGAAGGCCACTCAGGCATGGTCCTCCCAGACCAGGCTGCTCTCCACTGTCCATCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 90 bp | GTGTCTGTGGCTTGTGCCAACTCAGGTCACACATGGACAGTGCCGTaGGTGTCACAGCAACACAGGTCACACACGGACAGTGCCATGAGT | + |
Preference number: 1 (lower is better) Translates to: VSVACANSGHTWTVP*VSQQHRSHTDSAMS Trigger: ACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGTGACACTCACGGCACTGTCCATGTGTGACCTGAGTTGGCACAAGCCACAGACAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR CCA 90 bp | GATGGACAGTGGAGAGCAGCCTGGTCTGGGAGGACCATGCCTGAGTaGCCTTCCTCAGACTCAATAGAAGTGGGTGCAAACTGTTCTTTG | + |
Preference number: 1 (lower is better) Translates to: DGQWRAAWSGRTMPE*PSSDSIEVGANCSL Trigger: CAAAGAACAGTTTGCACCCACTTCTATTGAGTCTGAGGAAGGCCACTCAGGCATGGTCCTCCCAGACCAGGCTGCTCTCCACTGTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 90 bp | TCACAGGCTTTCAAAAATCACAGCAGCAGCCAGCAGGATTCACAGTaGCCAGGAGGGAAGGCATTGACGCTGGGACTTTCACAAGAGCCC | + |
Preference number: 1 (lower is better) Translates to: SQAFKNHSSSQQDSQ*PGGKALTLGLSQEP Trigger: GGGCTCTTGTGAAAGTCCCAGCGTCAATGCCTTCCCTCCTGGTCACTGTGAATCCTGCTGGCTGCTGCTGTGATTTTTGAAAGCCTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR GCA 90 bp | ATTGAGCAGAAAGACCGGGCTCACAGGTCTGTTCCCAGGTCCTGCTaGTTCTATTTCACAGGCTTTCAAAAATCACAGCAGCAGCCAGCA | + |
Preference number: 1 (lower is better) Translates to: IEQKDRAHRSVPRSC*FYFTGFQKSQQQPA Trigger: TGCTGGCTGCTGCTGTGATTTTTGAAAGCCTGTGAAATAGAAGCAGCAGGACCTGGGAACAGACCTGTGAGCCCGGTCTTTCTGCTCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR GCA 90 bp | CACATTGAGCAGAAAGACCGGGCTCACAGGTCTGTTCCCAGGTCCTaGTGCTTCTATTTCACAGGCTTTCAAAAATCACAGCAGCAGCCA | + |
Preference number: 1 (lower is better) Translates to: HIEQKDRAHRSVPRS*CFYFTGFQKSQQQP Trigger: TGGCTGCTGCTGTGATTTTTGAAAGCCTGTGAAATAGAAGCAGCAGGACCTGGGAACAGACCTGTGAGCCCGGTCTTTCTGCTCAATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 90 bp | AGACTCAATAGAAGTGGGTGCAAACTGTTCTTTGGAGAACCTGGGTaGATCAAGACATGGATGCCTGCTGCTGTCCTAGCACCTTGGCTG | + |
Preference number: 1 (lower is better) Translates to: RLNRSGCKLFFGEPG*IKTWMPAAVLAPWL Trigger: CAGCCAAGGTGCTAGGACAGCAGCAGGCATCCATGTCTTGATTCACCCAGGTTCTCCAAAGAACAGTTTGCACCCACTTCTATTGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 90 bp | AGGTCACACACGGACAGTGCCATGAGTGTCACAGCTTTGTTTCGATaGGATCTTGAATTCTATGTTAAATTATTGCAAGGAGGAAGACAA | + |
Preference number: 1 (lower is better) Translates to: RSHTDSAMSVTALFR*DLEFYVKLLQGGRQ Trigger: TTGTCTTCCTCCTTGCAATAATTTAACATAGAATTCAAGATCTCATCGAAACAAAGCTGTGACACTCATGGCACTGTCCGTGTGTGACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR-3UTR GCA 90 bp | GGGTGTCTGTGGCTTGTGCCAACTCAGGTCACACATGGACAGTGCCGTGAGTGTGACATGGATGCCTGCTaGTGTCCTAGCACCTTGGCT | + |
Preference number: 2 (lower is better) Translates to: GCLWLVPTQVTHGQCRECDMDAC*CPSTLA Trigger: AGCCAAGGTGCTAGGACAGCAGCAGGCATCCATGTC...ACACTCACGGCACTGTCCATGTGTGACCTGAGTTGGCACAAGCCACAGACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR-3UTR TCA 90 bp | TTGAGCAGAAAGACCGGGCTCACAGGTCTGTTCCCAGGTCCTGCTGCTTCTATTCAGGAGGGAAGGCATTaGCGCTGGGACTTTCACAAG | + |
Preference number: 2 (lower is better) Translates to: LSRKTGLTGLFPGPAASIQEGRH*RWDFHK Trigger: CTTGTGAAAGTCCCAGCGTCAATGCCTTCCCTCCTG...AATAGAAGCAGCAGGACCTGGGAACAGACCTGTGAGCCCGGTCTTTCTGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR-3UTR GCA 90 bp | ACACAGGTCACACACGGACAGTGCCATGAGTGTCACAGCTTTGTTTCGATGAGAGGTCTGGGAGGACCATaGCTGAGTGGCCTTCCTCAG | + |
Preference number: 2 (lower is better) Translates to: TQVTHGQCHECHSFVSMRGLGGP*LSGLPQ Trigger: CTGAGGAAGGCCACTCAGGCATGGTCCTCCCAGACC...TCTCATCGAAACAAAGCTGTGACACTCATGGCACTGTCCGTGTGTGACCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR CAA 90 bp | ATGAGGTCAGGCAGTGTCTGTAAGTTTTCACCACGGGAATTCACATaGAGCAGAAAGACCGGGCTCACAGGTCTGTTCCCAGGTCCTGCT | + |
Preference number: 2 (lower is better) Translates to: MRSGSVCKFSPREFT*SRKTGLTGLFPGPA Trigger: AGCAGGACCTGGGAACAGACCTGTGAGCCCGGTCTTTCTGCTCAATGTGAATTCCCGTGGTGAAAACTTACAGACACTGCCTGACCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR-3UTR TCA 90 bp | AGTGCCGTGAGTGTCACAGCAACACAGGTCACACACGGACAGTGCCATGAGTGTTTTGGAGAACCTGGGTaGATCAAGACATGGATGCCT | + |
Preference number: 2 (lower is better) Translates to: SAVSVTATQVTHGQCHECFGEPG*IKTWMP Trigger: AGGCATCCATGTCTTGATTCACCCAGGTTCTCCAAA...ACACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGTGACACTCACGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR-3UTR TCA 90 bp | TTGAGCAGAAAGACCGGGCTCACAGGTCTGTTCCCAGGTCCTGCTGCTTCTATTACACGGACAGTGCCATaGGTGTCACAGCTTTGTTTC | + |
Preference number: 2 (lower is better) Translates to: LSRKTGLTGLFPGPAASITRTVP*VSQLCF Trigger: GAAACAAAGCTGTGACACTCATGGCACTGTCCGTGT...AATAGAAGCAGCAGGACCTGGGAACAGACCTGTGAGCCCGGTCTTTCTGCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR CAA 90 bp | GAGTGGCCTTCCTCAGACTCAATAGAAGTGGGTGCAAACTGTTCTTaGGAGAACCTGGGTGAATCAAGACATGGATGCCTGCTGCTGTCC | + |
Preference number: 2 (lower is better) Translates to: EWPSSDSIEVGANCS*ENLGESRHGCLLLS Trigger: GGACAGCAGCAGGCATCCATGTCTTGATTCACCCAGGTTCTCCAAAGAACAGTTTGCACCCACTTCTATTGAGTCTGAGGAAGGCCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR CCA 72 bp | CGGGATCTGAGGCAGGATGGACAGTGGAGAGCAGCCTaGTCTGGGAGGACCATGCCTGAGTGGCCTTCCTCA | + |
Preference number: 3 (lower is better) Translates to: RDLRQDGQWRAA*SGRTMPEWPSS Trigger: TGAGGAAGGCCACTCAGGCATGGTCCTCCCAGACCAGGCTGCTCTCCACTGTCCATCCTGCCTCAGATCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 72 bp | GGGAAGGCATTGACGCTGGGACTTTCACAAGAGCCCTaGGTGATGTCTCAGAAGCCAGGCTGGGAGGTGGGG | + |
Preference number: 3 (lower is better) Translates to: GKALTLGLSQEP*VMSQKPGWEVG Trigger: CCCCACCTCCCAGCCTGGCTTCTGAGACATCACTCAGGGCTCTTGTGAAAGTCCCAGCGTCAATGCCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR GCA 72 bp | CTGTGGCTTGTGCCAACTCAGGTCACACATGGACAGTaGCGTGAGTGTCACAGCAACACAGGTCACACACGG | + |
Preference number: 3 (lower is better) Translates to: LWLVPTQVTHGQ*RECHSNTGHTR Trigger: CCGTGTGTGACCTGTGTTGCTGTGACACTCACGGCACTGTCCATGTGTGACCTGAGTTGGCACAAGCCACAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR CCA 72 bp | TGGAGAGCAGCCTGGTCTGGGAGGACCATGCCTGAGTaGCCTTCCTCAGACTCAATAGAAGTGGGTGCAAAC | + |
Preference number: 3 (lower is better) Translates to: WRAAWSGRTMPE*PSSDSIEVGAN Trigger: GTTTGCACCCACTTCTATTGAGTCTGAGGAAGGCCACTCAGGCATGGTCCTCCCAGACCAGGCTGCTCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 72 bp | GCTTGTGCCAACTCAGGTCACACATGGACAGTGCCGTaGGTGTCACAGCAACACAGGTCACACACGGACAGT | + |
Preference number: 3 (lower is better) Translates to: ACANSGHTWTVP*VSQQHRSHTDS Trigger: ACTGTCCGTGTGTGACCTGTGTTGCTGTGACACTCACGGCACTGTCCATGTGTGACCTGAGTTGGCACAAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 72 bp | GCAGTGTCTGTAAGTTTTCACCACGGGAATTCACATTaGGCAGAAAGACCGGGCTCACAGGTCTGTTCCCAG | + |
Preference number: 3 (lower is better) Translates to: AVSVSFHHGNSH*AERPGSQVCSQ Trigger: CTGGGAACAGACCTGTGAGCCCGGTCTTTCTGCTCAATGTGAATTCCCGTGGTGAAAACTTACAGACACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 72 bp | AGAAGTGGGTGCAAACTGTTCTTTGGAGAACCTGGGTaGATCAAGACATGGATGCCTGCTGCTGTCCTAGCA | + |
Preference number: 3 (lower is better) Translates to: RSGCKLFFGEPG*IKTWMPAAVLA Trigger: TGCTAGGACAGCAGCAGGCATCCATGTCTTGATTCACCCAGGTTCTCCAAAGAACAGTTTGCACCCACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR GCA 72 bp | GTGAGTGTCACAGCAACACAGGTCACACACGGACAGTaGCATGAGTGTCACAGCTTTGTTTCGATGAGATCT | + |
Preference number: 3 (lower is better) Translates to: VSVTATQVTHGQ*HECHSFVSMRS Trigger: AGATCTCATCGAAACAAAGCTGTGACACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGTGACACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR GCA 72 bp | AAAGACCGGGCTCACAGGTCTGTTCCCAGGTCCTGCTaGTTCTATTTCACAGGCTTTCAAAAATCACAGCAG | + |
Preference number: 3 (lower is better) Translates to: KDRAHRSVPRSC*FYFTGFQKSQQ Trigger: CTGCTGTGATTTTTGAAAGCCTGTGAAATAGAAGCAGCAGGACCTGGGAACAGACCTGTGAGCCCGGTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR GCA 72 bp | CAGAAAGACCGGGCTCACAGGTCTGTTCCCAGGTCCTaGTGCTTCTATTTCACAGGCTTTCAAAAATCACAG | + |
Preference number: 3 (lower is better) Translates to: QKDRAHRSVPRS*CFYFTGFQKSQ Trigger: CTGTGATTTTTGAAAGCCTGTGAAATAGAAGCAGCAGGACCTGGGAACAGACCTGTGAGCCCGGTCTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR CCA 72 bp | ATCAAGGAAAAGAGTCAGGAGCCTTCCCTGACTAACTaGTCAGCATTGCCAATGTCCAAGGCACACGCACAT | + |
Preference number: 3 (lower is better) Translates to: IKEKSQEPSLTN*SALPMSKAHAH Trigger: ATGTGCGTGTGCCTTGGACATTGGCAATGCTGACCAGTTAGTCAGGGAAGGCTCCTGACTCTTTTCCTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR TCA 72 bp | TGTCACAGCAACACAGGTCACACACGGACAGTGCCATaGGTGTCACAGCTTTGTTTCGATGAGATCTTGAAT | + |
Preference number: 3 (lower is better) Translates to: CHSNTGHTRTVP*VSQLCFDEILN Trigger: ATTCAAGATCTCATCGAAACAAAGCTGTGACACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR TCA 90 bp | GAAGGCATTGACGCTGGGACTTTCACAAGAGCCCTGAGTGATGTCTCAGAAGCCCGCCAGCCTGGCACATaGAGGCTGGGATCACCCTGT | + |
Preference number: 4 (lower is better) Translates to: EGIDAGTFTRALSDVSEARQPGT*RLGSPC Trigger: ACAGGGTGATCCCAGCCTTCATGTGCCAGGCTGGCG...GGCTTCTGAGACATCACTCAGGGCTCTTGTGAAAGTCCCAGCGTCAATGCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR TCA 90 bp | GGGGTTGGGGGTGTCTGTGGCTTGTGCCAACTCAGGTCACACATGGACAGTGCCCAGTGCATAGGGCTCTaGAGTTCTCTGCAGTCTTTG | + |
Preference number: 4 (lower is better) Translates to: GVGGVCGLCQLRSHMDSAQCIGL*SSLQSL Trigger: CAAAGACTGCAGAGAACTTCAGAGCCCTATGCACTG...GGCACTGTCCATGTGTGACCTGAGTTGGCACAAGCCACAGACACCCCCAACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR TCA 90 bp | GGGGTTGGGGGTGTCTGTGGCTTGTGCCAACTCAGGTCACACATGGACAGTGCCGTGCAGATAAAGAACTaGGAGCCATTGGTGTTGGGG | + |
Preference number: 4 (lower is better) Translates to: GVGGVCGLCQLRSHMDSAVQIKN*EPLVLG Trigger: CCCCAACACCAATGGCTCTCAGTTCTTTATCTGCAC...GGCACTGTCCATGTGTGACCTGAGTTGGCACAAGCCACAGACACCCCCAACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR TCA 90 bp | GAAGGCATTGACGCTGGGACTTTCACAAGAGCCCTGAGTGATGTCTCAGAAGCCTGCCATTGTGGTTGGTaGAGTCGCCAGCCTGGCACA | + |
Preference number: 4 (lower is better) Translates to: EGIDAGTFTRALSDVSEACHCGW*SRQPGT Trigger: TGTGCCAGGCTGGCGACTTCACCAACCACAATGGCA...GGCTTCTGAGACATCACTCAGGGCTCTTGTGAAAGTCCCAGCGTCAATGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CCA 90 bp | AGTGCCGTGAGTGTCACAGCAACACAGGTCACACACGGACAGTGCCATGAGTGTCATGGACAGGACACCTaGCCCCACATGCTTCAGTGT | + |
Preference number: 4 (lower is better) Translates to: SAVSVTATQVTHGQCHECHGQDT*PHMLQC Trigger: ACACTGAAGCATGTGGGGCCAGGTGTCCTGTCCATG...ACACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGTGACACTCACGGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR GCA 90 bp | AGTGCCGTGAGTGTCACAGCAACACAGGTCACACACGGACAGTGCCATGAGTGTTGGCCGAACACGACATaGTTGCCATCTAGCCAGTCT | + |
Preference number: 4 (lower is better) Translates to: SAVSVTATQVTHGQCHECWPNTT*LPSSQS Trigger: AGACTGGCTAGATGGCAAGCATGTCGTGTTCGGCCA...ACACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGTGACACTCACGGCACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CCA 90 bp | AGTGCCGTGAGTGTCACAGCAACACAGGTCACACACGGACAGTGCCATGAGTGTTCACCCTGTGGAAGGTaGAGCCTTTGTAGCCAAAGC | + |
Preference number: 4 (lower is better) Translates to: SAVSVTATQVTHGQCHECSPCGR*SLCSQS Trigger: GCTTTGGCTACAAAGGCTCCACCTTCCACAGGGTGA...ACACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGTGACACTCACGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CCA 90 bp | ACAGCAACACAGGTCACACACGGACAGTGCCATGAGTGTCACAGCTTTGTTTCGCCTCCTGTGCCATTGTaGTTGGTGAAGTCGCCAGCC | + |
Preference number: 4 (lower is better) Translates to: TATQVTHGQCHECHSFVSPPVPL*LVKSPA Trigger: GGCTGGCGACTTCACCAACCACAATGGCACAGGAGG...CGAAACAAAGCTGTGACACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR TCA 90 bp | GAAGGCATTGACGCTGGGACTTTCACAAGAGCCCTGAGTGATGTCTCAGAAGCCCCACATGCTTCAGTGTaGAGTTCTCGTCGGGAAAGC | + |
Preference number: 4 (lower is better) Translates to: EGIDAGTFTRALSDVSEAPHASV*SSRRES Trigger: GCTTTCCCGACGAGAACTTCACACTGAAGCATGTGG...GGCTTCTGAGACATCACTCAGGGCTCTTGTGAAAGTCCCAGCGTCAATGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CCA 90 bp | ACACAGGTCACACACGGACAGTGCCATGAGTGTCACAGCTTTGTTTCGATGAGAAGCGGCTTCCGTAGATaGACCTCCCTCCTGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: TQVTHGQCHECHSFVSMRSGFRR*TSLLCH Trigger: ATGGCACAGGAGGGAGGTCCATCTACGGAAGCCGCT...TCTCATCGAAACAAAGCTGTGACACTCATGGCACTGTCCGTGTGTGACCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR TCA 90 bp | GCAAACTGTTCTTTGGAGAACCTGGGTGAATCAAGACATGGATGCCTGCTGCTGCATCCATGCCCTCTTTaGCATGGCCGAACACGACAT | + |
Preference number: 4 (lower is better) Translates to: ANCSLENLGESRHGCLLLHPCPL*HGRTRH Trigger: ATGTCGTGTTCGGCCATGTCAAAGAGGGCATGGATG...CAGCAGCAGGCATCCATGTCTTGATTCACCCAGGTTCTCCAAAGAACAGTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR GCA 90 bp | AAGGAAAAGAGTCAGGAGCCTTCCCTGACTAACTGGTCAGCATTGCCAATGTCCACACCTGGCCCCACATaGTTCAGTGTGAAGTTCTCG | + |
Preference number: 4 (lower is better) Translates to: KEKSQEPSLTNWSALPMSTPGPT*FSVKFS Trigger: CGAGAACTTCACACTGAAGCATGTGGGGCCAGGTGT...GGACATTGGCAATGCTGACCAGTTAGTCAGGGAAGGCTCCTGACTCTTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CCA 90 bp | CAAACTGTTCTTTGGAGAACCTGGGTGAATCAAGACATGGATGCCTGCTGCTGTCTGGCACATGAAGGCTaGGATCACCCTGTGGAAGGT | + |
Preference number: 4 (lower is better) Translates to: QTVLWRTWVNQDMDACCCLAHEG*DHPVEG Trigger: ACCTTCCACAGGGTGATCCCAGCCTTCATGTGCCAG...ACAGCAGCAGGCATCCATGTCTTGATTCACCCAGGTTCTCCAAAGAACAGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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3UTR CAA 72 bp | GGCAGTGTCTGTAAGTTTTCACCACGGGAATTCACATaGAGCAGAAAGACCGGGCTCACAGGTCTGTTCCCA | + |
Preference number: 4 (lower is better) Translates to: GSVCKFSPREFT*SRKTGLTGLFP Trigger: TGGGAACAGACCTGTGAGCCCGGTCTTTCTGCTCAATGTGAATTCCCGTGGTGAAAACTTACAGACACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR TCA 90 bp | AAGGAAAAGAGTCAGGAGCCTTCCCTGACTAACTGGTCAGCATTGCCAATGTCCCGTCTTCCCACTTTTTaGGCCGAAAGATTCTATTTT | + |
Preference number: 4 (lower is better) Translates to: KEKSQEPSLTNWSALPMSRLPTF*AERFYF Trigger: AAAATAGAATCTTTCGGCTCAAAAAGTGGGAAGACG...GGACATTGGCAATGCTGACCAGTTAGTCAGGGAAGGCTCCTGACTCTTTTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CAA 90 bp | GGGGTTGGGGGTGTCTGTGGCTTGTGCCAACTCAGGTCACACATGGACAGTGCCAGTTCTCTGCAGTCTTaGGCACGACATCTGCCTTTA | + |
Preference number: 5 (lower is better) Translates to: GVGGVCGLCQLRSHMDSASSLQS*ARHLPL Trigger: TAAAGGCAGATGTCGTGCCAAAGACTGCAGAGAACT...GGCACTGTCCATGTGTGACCTGAGTTGGCACAAGCCACAGACACCCCCAACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CAA 90 bp | ACAGCAACACAGGTCACACACGGACAGTGCCATGAGTGTCACAGCTTTGTTTCGCTCCCTCCTGTGCCATaGTGGTTGGTGAAGTCGCCA | + |
Preference number: 5 (lower is better) Translates to: TATQVTHGQCHECHSFVSLPPVP*WLVKSP Trigger: TGGCGACTTCACCAACCACAATGGCACAGGAGGGAG...CGAAACAAAGCTGTGACACTCATGGCACTGTCCGTGTGTGACCTGTGTTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CAA 90 bp | ACACAGGTCACACACGGACAGTGCCATGAGTGTCACAGCTTTGTTTCGATGAGAACATCCATGCCCTCTTaGACATGGCCGAACACGACA | + |
Preference number: 5 (lower is better) Translates to: TQVTHGQCHECHSFVSMRTSMPS*TWPNTT Trigger: TGTCGTGTTCGGCCATGTCAAAGAGGGCATGGATGT...TCTCATCGAAACAAAGCTGTGACACTCATGGCACTGTCCGTGTGTGACCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |
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CDS-3UTR CAA 90 bp | CAAACTGTTCTTTGGAGAACCTGGGTGAATCAAGACATGGATGCCTGCTGCTGTACGTCTTCCCACTTTTaGAGCCGAAAGATTCTATTT | + |
Preference number: 5 (lower is better) Translates to: QTVLWRTWVNQDMDACCCTSSHF*SRKILF Trigger: AAATAGAATCTTTCGGCTCAAAAAGTGGGAAGACGT...ACAGCAGCAGGCATCCATGTCTTGATTCACCCAGGTTCTCCAAAGAACAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022419.7 |