RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPIB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032383

Ensembl transcript IDs: ENSMUST00000034947.7

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGCACAGAACCTTGTGACTGGCTACCTTCGTCTGTGTGGGGATTaGCAGGACCCACACAGACAGCTGCTTAGAGGGATGAGGTCCCCC +
Preference number: 1 (lower is better)
Translates to: VAQNLVTGYLRLCGD*QDPHRQLLRGMRSP
Trigger: GGGGGACCTCATCCCTCTAAGCAGCTGTCTGTGTGGGTCCTGTCAATCCCCACACAGACGAAGGTAGCCAGTCACAAGGTTCTGTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
3UTR TCA 90 bp CCCCATCAGATGGAAGCACTAGGGCCAGGGTGGCACAGAACCTTGTaGCTGGCTACCTTCGTCTGTGTGGGGATTGACAGGACCCACACA +
Preference number: 1 (lower is better)
Translates to: PHQMEALGPGWHRTL*LATFVCVGIDRTHT
Trigger: TGTGTGGGTCCTGTCAATCCCCACACAGACGAAGGTAGCCAGTCACAAGGTTCTGTGCCACCCTGGCCCTAGTGCTTCCATCTGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
3UTR-3UTR TCA 90 bp TCAGGCCTGTGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGTGGCACAGAACCTTGTaGCTGGCTACCTTCGTCTGT +
Preference number: 2 (lower is better)
Translates to: SGLWNVRGVVTPSDGSTRWHRTL*LATFVC
Trigger: ACAGACGAAGGTAGCCAGTCACAAGGTTCTGTGCCA...CCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCACAGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
3UTR TCA 72 bp ATGGAAGCACTAGGGCCAGGGTGGCACAGAACCTTGTaGCTGGCTACCTTCGTCTGTGTGGGGATTGACAGG +
Preference number: 3 (lower is better)
Translates to: MEALGPGWHRTL*LATFVCVGIDR
Trigger: CCTGTCAATCCCCACACAGACGAAGGTAGCCAGTCACAAGGTTCTGTGCCACCCTGGCCCTAGTGCTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
3UTR-3UTR CAA 90 bp AAATCAGGCCTGTGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTTCGTCTGTGTGGGGATaGACAGGACCCACACAGACA +
Preference number: 3 (lower is better)
Translates to: KSGLWNVRGVVTPSDGSTSSVWG*TGPTQT
Trigger: TGTCTGTGTGGGTCCTGTCAATCCCCACACAGACGA...AGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCACAGGCCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR GCA 90 bp GTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGGCACAGTGCCTGCATTGGCCATaGTCACCCAGCCAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: VRGVVTPSDGSTRARVAQCLHWP*SPSQAR
Trigger: ACGGGCCTGGCTGGGTGAGCATGGCCAATGCAGGCA...CTGTGCCACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CCA 90 bp GTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGGCACAGTGTCTTTGCCTGCATTaGCCATGCTCACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VRGVVTPSDGSTRARVAQCLCLH*PCSPSQ
Trigger: CTGGCTGGGTGAGCATGGCCAATGCAGGCAAAGACA...CTGTGCCACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR TCA 90 bp TGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGTGCCATCTCCCCTGGTaGAGTCTCCACCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: WNVRGVVTPSDGSTRARVCHLPW*SLHPGS
Trigger: TGATCCAGGGTGGAGACTTCACCAGGGGAGATGGCA...CACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR GCA 90 bp TGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGAGAGCACCTTCATATTaGGCTCCGAGAGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WNVRGVVTPSDGSTRARVRAPSY*APRGAA
Trigger: TGCTGCGCCTCTCGGAGCGCAATATGAAGGTGCTCT...CACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR GCA 90 bp AATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGGCACGAAAACCACATGCTTaGCATCCAGCCAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NVRGVVTPSDGSTRARVARKPHA*HPARRS
Trigger: AGACCTCCTGGCTGGATGGCAAGCATGTGGTTTTCG...TGCCACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CCA 90 bp TCAGGCCTGTGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGATGACATCCTTCAGTaGCTTGTCCCGGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SGLWNVRGVVTPSDGSTRDDILQ*LVPAVC
Trigger: ACAGACAGCCGGGACAAGCCACTGAAGGATGTCATC...CCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCACAGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR GCA 90 bp TCAGGCCTGTGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGATTGGTGTCTTTGCCTaGATTGGCCATGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SGLWNVRGVVTPSDGSTRIGVFA*IGHAHP
Trigger: TGGGTGAGCATGGCCAATGCAGGCAAAGACACCAAT...CCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCACAGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR GCA 90 bp TGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGTGCCCTCTAGAACTTTaGCGAAAACCACATGCTTGC +
Preference number: 4 (lower is better)
Translates to: WNVRGVVTPSDGSTRARVCPLEL*RKPHAC
Trigger: GCAAGCATGTGGTTTTCGGCAAAGTTCTAGAGGGCA...CACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CCA 90 bp AGCACTAGGGCCAGGGTGGCACAGAACCTTGTGACTGGCTACCTTCGTCTGTGTAGAACTGTGAGCCATTaGTGTCTTTGCCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: STRARVAQNLVTGYLRLCRTVSH*CLCLHW
Trigger: CCAATGCAGGCAAAGACACCAATGGCTCACAGTTCT...ACACAGACGAAGGTAGCCAGTCACAAGGTTCTGTGCCACCCTGGCCCTAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS TCA 90 bp CCACGGAGGGTCCGGGCAGCAAAAGGAAGACGACGGAGCCCACGATaGGGGCGGCGGCGAAGAGCACCTTCATATTGCGCTCCGAGAGGC +
Preference number: 5 (lower is better)
Translates to: PRRVRAAKGRRRSPR*GRRRRAPSYCAPRG
Trigger: GCCTCTCGGAGCGCAATATGAAGGTGCTCTTCGCCGCCGCCCTCATCGTGGGCTCCGTCGTCTTCCTTTTGCTGCCCGGACCCTCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CAA 90 bp AGCACTAGGGCCAGGGTGGCACAGAACCTTGTGACTGGCTACCTTCGTCTGTGTAAGAGCACCTTCATATaGCGCTCCGAGAGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: STRARVAQNLVTGYLRLCKSTFI*RSERRS
Trigger: GCTGCGCCTCTCGGAGCGCAATATGAAGGTGCTCTT...ACACAGACGAAGGTAGCCAGTCACAAGGTTCTGTGCCACCCTGGCCCTAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CAA 90 bp AGCACTAGGGCCAGGGTGGCACAGAACCTTGTGACTGGCTACCTTCGTCTGTGTGTGTCTTTGCCTGCATaGGCCATGCTCACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: STRARVAQNLVTGYLRLCVSLPA*AMLTQP
Trigger: TGGCTGGGTGAGCATGGCCAATGCAGGCAAAGACAC...ACACAGACGAAGGTAGCCAGTCACAAGGTTCTGTGCCACCCTGGCCCTAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CAA 90 bp AATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGGCAACATCCTTCAGTGGCTaGTCCCGGCTGTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: NVRGVVTPSDGSTRARVATSFSG*SRLSVL
Trigger: CAAGACAGACAGCCGGGACAAGCCACTGAAGGATGT...TGCCACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CAA 90 bp AAATCAGGCCTGTGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTTCCCGGCTGTCTGTCTaGGTGCTCTCCACCTTCCGT +
Preference number: 5 (lower is better)
Translates to: KSGLWNVRGVVTPSDGSTSRLSV*VLSTFR
Trigger: ACGGAAGGTGGAGAGCACCAAGACAGACAGCCGGGA...AGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCACAGGCCTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS CCA 90 bp CTCCACTTCGATCTTGCCGGAGTCGACAATGATGACATCCTTCAGTaGCTTGTCCCGGCTGTCTGTCTTGGTGCTCTCCACCTTCCGTAC +
Preference number: 5 (lower is better)
Translates to: LHFDLAGVDNDDILQ*LVPAVCLGALHLPY
Trigger: GTACGGAAGGTGGAGAGCACCAAGACAGACAGCCGGGACAAGCCACTGAAGGATGTCATCATTGTCGACTCCGGCAAGATCGAAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CAA 90 bp TGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGAAGAACTGTGAGCCATaGGTGTCTTTGCCTGCATTG +
Preference number: 5 (lower is better)
Translates to: WNVRGVVTPSDGSTRARVKNCEP*VSLPAL
Trigger: CAATGCAGGCAAAGACACCAATGGCTCACAGTTCTT...CACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CAA 90 bp TCAGGCCTGTGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGATGCCCTCTAGAACTTaGCCGAAAACCACATGCTTG +
Preference number: 5 (lower is better)
Translates to: SGLWNVRGVVTPSDGSTRMPSRT*PKTTCL
Trigger: CAAGCATGTGGTTTTCGGCAAAGTTCTAGAGGGCAT...CCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCACAGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS-3UTR CAA 90 bp TGGAATGTGAGGGGTGTGGTCACCCCATCAGATGGAAGCACTAGGGCCAGGGTGAAATCAAAGTATACCTaGACTGTGACTTTAGGTCCC +
Preference number: 5 (lower is better)
Translates to: WNVRGVVTPSDGSTRARVKSKYT*TVTLGP
Trigger: GGGACCTAAAGTCACAGTCAAGGTATACTTTGATTT...CACCCTGGCCCTAGTGCTTCCATCTGATGGGGTGACCACACCCCTCACATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS TCA 72 bp GTCCGGGCAGCAAAAGGAAGACGACGGAGCCCACGATaGGGGCGGCGGCGAAGAGCACCTTCATATTGCGCT +
Preference number: 6 (lower is better)
Translates to: VRAAKGRRRSPR*GRRRRAPSYCA
Trigger: AGCGCAATATGAAGGTGCTCTTCGCCGCCGCCCTCATCGTGGGCTCCGTCGTCTTCCTTTTGCTGCCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS CCA 72 bp GATCTTGCCGGAGTCGACAATGATGACATCCTTCAGTaGCTTGTCCCGGCTGTCTGTCTTGGTGCTCTCCAC +
Preference number: 6 (lower is better)
Translates to: DLAGVDNDDILQ*LVPAVCLGALH
Trigger: GTGGAGAGCACCAAGACAGACAGCCGGGACAAGCCACTGAAGGATGTCATCATTGTCGACTCCGGCAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS CAA 72 bp TTGCCGGAGTCGACAATGATGACATCCTTCAGTGGCTaGTCCCGGCTGTCTGTCTTGGTGCTCTCCACCTTC +
Preference number: 6 (lower is better)
Translates to: LPESTMMTSFSG*SRLSVLVLSTF
Trigger: GAAGGTGGAGAGCACCAAGACAGACAGCCGGGACAAGCCACTGAAGGATGTCATCATTGTCGACTCCGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS CAA 90 bp ACTTCGATCTTGCCGGAGTCGACAATGATGACATCCTTCAGTGGCTaGTCCCGGCTGTCTGTCTTGGTGCTCTCCACCTTCCGTACCACA +
Preference number: 6 (lower is better)
Translates to: TSILPESTMMTSFSG*SRLSVLVLSTFRTT
Trigger: TGTGGTACGGAAGGTGGAGAGCACCAAGACAGACAGCCGGGACAAGCCACTGAAGGATGTCATCATTGTCGACTCCGGCAAGATCGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS CAA 72 bp ACCTTGACTGTGACTTTAGGTCCCTTCTTCTTATCGTaGGCCACGGAGGGTCCGGGCAGCAAAAGGAAGACG +
Preference number: 6 (lower is better)
Translates to: TLTVTLGPFFLS*ATEGPGSKRKT
Trigger: CGTCTTCCTTTTGCTGCCCGGACCCTCCGTGGCCAACGATAAGAAGAAGGGACCTAAAGTCACAGTCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS CAA 90 bp TCAAAGTATACCTTGACTGTGACTTTAGGTCCCTTCTTCTTATCGTaGGCCACGGAGGGTCCGGGCAGCAAAAGGAAGACGACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SKYTLTVTLGPFFLS*ATEGPGSKRKTTEP
Trigger: GGGCTCCGTCGTCTTCCTTTTGCTGCCCGGACCCTCCGTGGCCAACGATAAGAAGAAGGGACCTAAAGTCACAGTCAAGGTATACTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS CAA 90 bp TCGACAATGATGACATCCTTCAGTGGCTTGTCCCGGCTGTCTGTCTaGGTGCTCTCCACCTTCCGTACCACATCCATGCCCTCTAGAACT +
Preference number: 6 (lower is better)
Translates to: STMMTSFSGLSRLSV*VLSTFRTTSMPSRT
Trigger: AGTTCTAGAGGGCATGGATGTGGTACGGAAGGTGGAGAGCACCAAGACAGACAGCCGGGACAAGCCACTGAAGGATGTCATCATTGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7
CDS CAA 72 bp TCCTTGGCAATGGCGAAGGGTTTCTCCACTTCGATCTaGCCGGAGTCGACAATGATGACATCCTTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: SLAMAKGFSTSI*PESTMMTSFSG
Trigger: GCCACTGAAGGATGTCATCATTGTCGACTCCGGCAAGATCGAAGTGGAGAAACCCTTCGCCATTGCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034947.7