Pregenerated sensors for PPEF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029410Ensembl transcript IDs: ENSMUST00000031359.9, ENSMUST00000201130.4
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAGCTGTCTTCATACACACCAGAAGAGGCTGACAGATCCACTATaGACCACAATGTGGTTGCCGGGAATTGAACTCAGGACCTCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: CSCLHTHQKRLTDPL*TTMWLPGIELRTSG Trigger: TCCAGAGGTCCTGAGTTCAATTCCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGAAGACAGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR TCA 90 bp | GTATATGATTTCACTGTAGCTGTCTTCATACACACCAGAAGAGGCTaGCAGATCCACTATGAACCACAATGTGGTTGCCGGGAATTGAAC | + |
|
Preference number: 1 (lower is better) Translates to: VYDFTVAVFIHTRRG*QIHYEPQCGCRELN Trigger: GTTCAATTCCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGAAGACAGCTACAGTGAAATCATATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR CCA 90 bp | AATGCTTTGTGGTGGCAAATTTTCAGGATAAAGTCCAAGTCCATGTaGAGTCATAAACTCAGCATCGCCTTAGGCACTTTGAGTAATAGA | + |
|
Preference number: 1 (lower is better) Translates to: NALWWQIFRIKSKSM*SHKLSIALGTLSNR Trigger: TCTATTACTCAAAGTGCCTAAGGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTGCCACCACAAAGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR-3UTR TCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGAGTGCTCTTAACCACTaGACCATCTCTCCAGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: YTPEEADRSTMNHNVVAGSALNH*TISPVQ Trigger: TTGGACTGGAGAGATGGTTCAGTGGTTAAGAGCACT...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR CAA 90 bp | GAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATGCTTaGTGGTGGCAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: EPSLQSKQVTLDLNA*WWQIFRIKSKSMWS Trigger: ACTCCACATGGACTTGGACTTTATCCTGAAAATTTGCCACCACAAAGCATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR-3UTR CCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCTTGAATGCTTTGTGGTaGCAAATTTTCAGGATAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SYTPEEADRSTMNHNVVALNALW*QIFRIK Trigger: CTTTATCCTGAAAATTTGCCACCACAAAGCATTCAA...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR CAA 90 bp | TTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTaGAATGCTTTGTGGTGGCAAATTTTCAGGATAAAGTCCAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LTTEPSLQSKQVTLD*NALWWQIFRIKSKS Trigger: GGACTTGGACTTTATCCTGAAAATTTGCCACCACAAAGCATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR TCA 72 bp | TTCACTGTAGCTGTCTTCATACACACCAGAAGAGGCTaGCAGATCCACTATGAACCACAATGTGGTTGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: FTVAVFIHTRRG*QIHYEPQCGCR Trigger: CCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGAAGACAGCTACAGTGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR-3UTR CAA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCATCGCCTTAGGCACTTaGAGTAATAGACCAGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SYTPEEADRSTMNHNVVAIALGT*SNRPVY Trigger: ATAGACTGGTCTATTACTCAAAGTGCCTAAGGCGAT...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR CCA 72 bp | TGGTGGCAAATTTTCAGGATAAAGTCCAAGTCCATGTaGAGTCATAAACTCAGCATCGCCTTAGGCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WWQIFRIKSKSM*SHKLSIALGTL Trigger: CAAAGTGCCTAAGGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTGCCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR CCA 72 bp | CAGTCCAAACAGGTAACTCTTGATTTGAATGCTTTGTaGTGGCAAATTTTCAGGATAAAGTCCAAGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: QSKQVTLDLNAL*WQIFRIKSKSM Trigger: CATGGACTTGGACTTTATCCTGAAAATTTGCCACCACAAAGCATTCAAATCAAGAGTTACCTGTTTGGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGGGACAGCGTTGGCCTTaGAGCCCTCCTGAGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGGQRWP*SPPEPR Trigger: CCGCGGCTCAGGAGGGCTGCAAGGCCAACGCTGTCC...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCGCCTTGCAGCCCTCCTaGGCCGCGGGATCACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLALQPS*AAGSLH Trigger: GTGGAGTGATCCCGCGGCTCAGGAGGGCTGCAAGGC...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGTCTGTCGAAGGGCTCTaGGGGCCGACTCCTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGSVEGL*GPTPPP Trigger: GGGTGGAGGAGTCGGCCCTCAGAGCCCTTCGACAGA...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCACTGAGCGCCGCACCTaGCCCCGCCGGGATAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVATERRT*PRRDSS Trigger: GGAGCTATCCCGGCGGGGGCAGGTGCGGCGCTCAGT...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCAGGGCTGGCCCCAGCTTaGCGTAGGCTCCTCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPGLAPA*RRLLCC Trigger: GCAACAGAGGAGCCTACGTCAAGCTGGGGCCAGCCC...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCCCCTCTAAGCAGGACTaGTCCACGAGGCGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLPSKQD*STRRKA Trigger: GGCCTTCCGCCTCGTGGAGCAGTCCTGCTTAGAGGG...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCCTCCTCGGACAGCGTTaGCCTTGCAGCCCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLLLGQR*PCSPPE Trigger: CTCAGGAGGGCTGCAAGGCCAACGCTGTCCGAGGAG...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGGATCTCCACACACTGTaGCCTCCTCGCTGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGDLHTL*PPRCSR Trigger: CCTGCTACAGCGAGGAGGTCACAGTGTGTGGAGATC...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGGGGCCTGGACTGCTATaGCCACTCTCAGCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGGPGLL*PLSAVS Trigger: AGACACTGCTGAGAGTGGCCATAGCAGTCCAGGCCC...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGCTGTTGTCGCAGCCTaGAAGCTTCCACCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVAAVVAA*KLPPGQ Trigger: CTGCCCTGGTGGAAGCTTTCAGGCTGCGACAACAGC...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATCAGTTCCAGGTCCACTaGGCGCCGCACCTGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNQFQVH*APHLPP Trigger: CGGGGGCAGGTGCGGCGCTCAGTGGACCTGGAACTG...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCCTGGATCAGGGCCGCTaGCTTGAAGGCTTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLLDQGR*LEGFLS Trigger: GCTGAGAAAGCCTTCAAGGCAGCGGCCCTGATCCAG...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCAATGTGGAGTCAGGGCTaGCCCCAGCTTGACGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPMWSQG*PQLDVG Trigger: GCCTACGTCAAGCTGGGGCCAGCCCTGACTCCACAT...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGCAGAGAGCGGCTTTaGGGAAGAAACCACGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVAGRERL*GRNHGV Trigger: TACTCCGTGGTTTCTTCCTCAAAGCCGCTCTCTGCC...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCTCGGGTTTGCACTCATaGGAACGGATCAGGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLSGLHS*ERIRSC Trigger: GCAACTCCTGATCCGTTCGCATGAGTGCAAACCCGA...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCCGCCGGTACCATCTCTaGATCAGGGCCGCTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIARRYHL*IRAAAL Trigger: CAAGGCAGCGGCCCTGATCCAGAGATGGTACCGGCG...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGTCATGGAGCTTGACCTaGTCTTGCTGTCCAGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGSWSLT*SCCPAY Trigger: GTATGCTGGACAGCAAGACCAGGTCAAGCTCCATGA...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATGGGGAAGGAGAGGCGTaGCCCCGTGTAGCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNGEGEA*PRVAVW Trigger: CCAGACAGCTACACGGGGCCACGCCTCTCCTTCCCC...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR CAA 72 bp | CAGATCCACTATGAACCACAATGTGGTTGCCGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QIHYEPQCGCRE*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCGGCAACCACATTGTGGTTCATAGTGGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCACCTCCAGGAACTCATTaGTGTCGATGTGGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPPPGTH*CRCGHP Trigger: AGGATGGCCACATCGACATCAATGAGTTCCTGGAGG...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCAGCCACAGGGGATGCTaGAGGACCTGCCGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIASHRGC*RTCRLC Trigger: ACAAAGCCGGCAGGTCCTGCAGCATCCCCTGTGGCT...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCAGAATATCTACAACCTaGTTCCACTCCTCGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLRISTT*FHSSGV Trigger: CACCCCCGAGGAGTGGAAGCAGGTTGTAGATATTCT...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCAACCCTGCTGATCCTTTaGCTCATGGTTAGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPTLLIL*LMVSLW Trigger: CCACAGGCTAACCATGAGGCAAAGGATCAGCAGGGT...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCAAGAATTCATGGAGCTTaGCCTGGTCTTGCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPRIHGA*PGLAVQ Trigger: CTGGACAGCAAGACCAGGTCAAGCTCCATGAATTCT...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCCAGGTCTGTCTTGTCTaGGACTCCACCATGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVAQVCLV*DSTMKN Trigger: GTTCTTCATGGTGGAGTCTCAGACAAGACAGACCTG...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATACTCCCCCTTCTCTCTaGTCCCCAGGAAGCCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNTPPSL*SPGSRL Trigger: AAGCCGGCTTCCTGGGGATCAGAGAGAAGGGGGAGT...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCAGGCTCCTCTGTTGCTaGCAACTTCATAGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLRLLCC*QLHSSW Trigger: CCAACTACTATGAAGTTGGCAGCAACAGAGGAGCCT...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCCCCCGTGTAGCTGTCTaGCACCTCTATGGATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVAPRVAV*HLYGFK Trigger: TTTGAATCCATAGAGGTGCCAGACAGCTACACGGGG...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCACTATTCACCAGTTGTaGCCGCAGCATCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIATIHQL*PQHPPG Trigger: CCCTGGCGGATGCTGCGGCCACAACTGGTGAATAGT...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATAAGCCAGAGCCCAGGTaGAAAGGCGAAGAGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNKPEPR*KGEEGR Trigger: TCTGCCCTCTTCGCCTTTTCACCTGGGCTCTGGCTT...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCCAGGGAGATGAATCCTaGATGATCGCTGTCTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLQGDES*MIAVYD Trigger: ATCATAGACAGCGATCATTCAGGATTCATCTCCCTG...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGTCGATGCTCATATGTaGGCTGAAGAGCTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVAVDAHM*AEELPS Trigger: ACTTGGAAGCTCTTCAGCTCACATATGAGCATCGAC...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGGAACGGATCAGGAGTTaGAGCTTGTATTTTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGERIRS*SLYFSI Trigger: GATGGAAAAATACAAGCTGCAACTCCTGATCCGTTC...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGAGATGGTTAACACCTTaGGGTTGTGACAGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGRWLTP*GCDRTH Trigger: ATGAGTTCTGTCACAACCGCAAGGTGTTAACCATCT...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCAAATCTCTCTCATGGTaGCTGCTGGGAGTGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVAKSLSW*LLGVKW Trigger: CCATTTCACTCCCAGCAGCCACCATGAGAGAGATTT...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCAGGGCCAGGTGTTTTCTaGTCTCGTACAGAAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPGPGVF*SRTEDS Trigger: TGAATCTTCTGTACGAGACCAGAAAACACCTGGCCC...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGAAATGGTCTCCAAGTTaGATCGGTTTCGATAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGKWSPS*IGFDRA Trigger: AGCTCTATCGAAACCGATCCAACTTGGAGACCATTT...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCTCTCAGCAGTGTCTGTaGACTGCAGGCAAGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIASQQCL*TAGKQR Trigger: CCTCTGCTTGCCTGCAGTCCACAGACACTGCTGAGA...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCACAGCAGAAGACATCCTaGAGTGTCCTTAGGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPQQKTS*SVLRIF Trigger: GAAAATCCTAAGGACACTTCAGGATGTCTTCTGCTG...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCAGCAGGTCCGACGAATaGGCAAATAATTTCTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVASRSDE*ANNFCR Trigger: TCGACAGAAATTATTTGCTCATTCGTCGGACCTGCT...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGGTAGAAACAATCTTGTaGCTGTCTAGTTTAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGVETIL*LSSLAR Trigger: TCTGGCTAAACTAGACAGGCACAAGATTGTTTCTAC...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGGCATACTCTATAGACTaGAAGATGTTCCAGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGAYSID*KMFQVH Trigger: ATGTACCTGGAACATCTTCCAGTCTATAGAGTATGC...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATATACTGCACGATATGTaGAGTCAGGGCTGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNILHDM*SQGWPQ Trigger: CTGGGGCCAGCCCTGACTCCACATATCGTGCAGTAT...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCTCATTGATGTCGATGTaGCCATCCTTGTTGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVASLMSM*PSLLKS Trigger: CGACTTCAACAAGGATGGCCACATCGACATCAATGA...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATACTCCTCCACCCTGCTaGTCCTTTGCCTCATGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNTPPPC*SFASWL Trigger: TAACCATGAGGCAAAGGATCAGCAGGGTGGAGGAGT...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGTTATCTTTTCTCTTCTaGTCCTCTCGATTCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YTPEEADRSTMNHNVVAGLSFLF*SSRFSL Trigger: AAGTGAGAATCGAGAGGAGCAGAAGAGAAAAGATAA...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATGTCCAGAGCTTGTCTaGTTATCTTTTCTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPCPELV*LSFLFC Trigger: GCAGAAGAGAAAAGATAACCAGACAAGCTCTGGACA...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATGGCTCAGCTGTTCTTTaGCCAAACTGTCCAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNGSAVL*PNCPTR Trigger: CCTGGTTGGACAGTTTGGCCAAAGAACAGCTGAGCC...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCGTCGCCTTGTTAGCTTaGTACTGCACGATATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIAVALLA*YCTICG Trigger: TCCACATATCGTGCAGTATCAAGCTAACAAGGCGAC...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATTGCTCATATGTGAGCTaGAGAGCTTCCAAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNCSYVS*RASKSA Trigger: GGCAGACTTGGAAGCTCTTCAGCTCACATATGAGCA...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCATTAAATCATCCAACTaGCCATGTAGATCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SYTPEEADRSTMNHNVVAIKSSN*PCRSPH Trigger: GTGTGGAGATCTACATGGCCAGTTGGATGATTTAAT...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCTGGGGTATACCAACATaGAGGCAAAGAGAACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIAWGIPT*RQREPS Trigger: TGATGGTTCTCTTTGCCTTCATGTTGGTATACCCCA...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATGCATCACTTCCTTGGTaGAGCCATATCGTAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNASLPW*SHIVGS Trigger: TGAACCTACGATATGGCTTCACCAAGGAAGTGATGC...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCTGTCTGGCACCTCTATaGATTCAAAATCTCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIACLAPL*IQNLHP Trigger: AGGGTGGAGATTTTGAATCCATAGAGGTGCCAGACA...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR TCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCGAGATGAATCCTGAATaGTCGCTGTCTATGATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIAEMNPE*SLSMIL Trigger: TAGGATCATAGACAGCGATCATTCAGGATTCATCTC...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR CAA 72 bp | CTCCAGTCCAAACAGGTAACTCTTGATTTGAATGCTTaGTGGTGGCAAATTTTCAGGATAAAGTCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSKQVTLDLNA*WWQIFRIKSKS Trigger: GGACTTGGACTTTATCCTGAAAATTTGCCACCACAAAGCATTCAAATCAAGAGTTACCTGTTTGGACTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCCAACTTCATAGTAGTTaGAGGCAGAAAAGATGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIAQLHSS*RQKRWL Trigger: TAACCATCTTTTCTGCCTCCAACTACTATGAAGTTG...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| 3UTR CAA 72 bp | GAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTaGAATGCTTTGTGGTGGCAAATTTTCAGGATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPSLQSKQVTLD*NALWWQIFRIK Trigger: CTTTATCCTGAAAATTTGCCACCACAAAGCATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR GCA 90 bp | CAAATTTTCAGGATAAAGTCCAAGTCCATGTGGAGTCATAAACTCAGCATCGCCTGTATCTTGTATTTATaGATCACTTCCTTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QIFRIKSKSMWSHKLSIACILYL*ITSLVK Trigger: CTTCACCAAGGAAGTGATGCATAAATACAAGATACA...GGCGATGCTGAGTTTATGACTCCACATGGACTTGGACTTTATCCTGAAAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS TCA 90 bp | GGGCCATGTAGCGCCGGTACCATCTCTGGATCAGGGCCGCTGCCTTaGAGGCTTTCTCAGCGTTCTGAAACGCAAAGTGGTGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPCSAGTISGSGPLP*RLSQRSETQSGAGW Trigger: CCACCCAGCACCACTTTGCGTTTCAGAACGCTGAGAAAGCCTTCAAGGCAGCGGCCCTGATCCAGAGATGGTACCGGCGCTACATGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 90 bp | TCTGTGGACTGCAGGCAAGCAGAGGCGTGGCCCTCTAAGCAGGACTaGTCCACGAGGCGGAAGGCCTCCAGGAACTCATTGATGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SVDCRQAEAWPSKQD*STRRKASRNSLMSM Trigger: CATCGACATCAATGAGTTCCTGGAGGCCTTCCGCCTCGTGGAGCAGTCCTGCTTAGAGGGCCACGCCTCTGCTTGCCTGCAGTCCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 90 bp | CTCCACCCTCCTCTGTCTCCACGTCCTGGGCGAATCTCTCTTCGGTaGACATGCGGTTCAGGAAATCTCTCTCATGGTGGCTGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHPPLSPRPGRISLR*TCGSGNLSHGGCWE Trigger: CTCCCAGCAGCCACCATGAGAGAGATTTCCTGAACCGCATGTTCACCGAAGAGAGATTCGCCCAGGACGTGGAGACAGAGGAGGGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 90 bp | GGCCAAACTGTCCAACCAGGACCTGTATTCCAACACGTTATCCGCTaGACTATTCACCAGTTGTGGCCGCAGCATCCGCCAGGGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQTVQPGPVFQHVIR*TIHQLWPQHPPGQS Trigger: GGACTGCCCTGGCGGATGCTGCGGCCACAACTGGTGAATAGTTCAGCGGATAACGTGTTGGAATACAGGTCCTGGTTGGACAGTTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCACCCCAGGAAGCCGGCTaGCTGCCGGCACTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPPQEAG*LPALFQ Trigger: CTGGAACAGTGCCGGCAGCAAGCCGGCTTCCTGGGG...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS TCA 90 bp | CTGATCCTTTGCCTCATGGTTAGCCTGTGGGTCGCCTTGTTAGCTTaGTACTGCACGATATGTGGAGTCAGGGCTGGCCCCAGCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LILCLMVSLWVALLA*YCTICGVRAGPSLT Trigger: CGTCAAGCTGGGGCCAGCCCTGACTCCACATATCGTGCAGTATCAAGCTAACAAGGCGACCCACAGGCTAACCATGAGGCAAAGGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 90 bp | TCATCCGGGTCGCGCTTCCTAAACTCAACAAGCAGGTCCGACGAATaGGCAAATAATTTCTGTCGAAGGGCTCTGAGGGCCGACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGSRFLNSTSRSDE*ANNFCRRALRADSS Trigger: GGAGGAGTCGGCCCTCAGAGCCCTTCGACAGAAATTATTTGCTCATTCGTCGGACCTGCTTGTTGAGTTTAGGAAGCGCGACCCGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 90 bp | GGTCGCCTTGTTAGCTTGATACTGCACGATATGTGGAGTCAGGGCTaGCCCCAGCTTGACGTAGGCTCCTCTGTTGCTGCCAACTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GRLVSLILHDMWSQG*PQLDVGSSVAANFI Trigger: TATGAAGTTGGCAGCAACAGAGGAGCCTACGTCAAGCTGGGGCCAGCCCTGACTCCACATATCGTGCAGTATCAAGCTAACAAGGCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 90 bp | TCATGGAGCTTGACCTGGTCTTGCTGTCCAGCATACTCTATAGACTaGAAGATGTTCCAGGTACATCGCCTCCTCATCTCTAGGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SWSLTWSCCPAYSID*KMFQVHRLLISRRA Trigger: GGCCCGCCTAGAGATGAGGAGGCGATGTACCTGGAACATCTTCCAGTCTATAGAGTATGCTGGACAGCAAGACCAGGTCAAGCTCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGAGACTCGGTTGATGTaGGGCAGCTGGGCCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SYTPEEADRSTMNHNVVAETRLM*GSWARC Trigger: ACACCTGGCCCAGCTGCCCAACATCAACCGAGTCTC...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCAATCAGGGCCGCTGCCTaGAAGGCTTTCTCAGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPIRAAA*KAFSAF Trigger: GAACGCTGAGAAAGCCTTCAAGGCAGCGGCCCTGAT...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGCAGAGAGCGGCTTaGAGGAAGAAACCACGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYTPEEADRSTMNHNVVAGQRAA*RKKPRS Trigger: ACTCCGTGGTTTCTTCCTCAAAGCCGCTCTCTGCCC...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS CCA 90 bp | ACCTCTATGGATTCAAAATCTCCACCCTCCTCTGTCTCCACGTCCTaGGCGAATCTCTCTTCGGTGAACATGCGGTTCAGGAAATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSMDSKSPPSSVSTS*ANLSSVNMRFRKSL Trigger: GAGAGATTTCCTGAACCGCATGTTCACCGAAGAGAGATTCGCCCAGGACGTGGAGACAGAGGAGGGTGGAGATTTTGAATCCATAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGTCGATGTGGCCATCCTaGTTGAAGTCGATGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTPEEADRSTMNHNVVAGSMWPS*LKSMLL Trigger: CAGAAGCATCGACTTCAACAAGGATGGCCACATCGA...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS CCA 90 bp | CTGAGACTCCACCATGAAGAACAAGGACTTTCTCATCAACCAGAGTaGCCAACGGAAGCCAGCAGAAGACATCCTGAAGTGTCCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRLHHEEQGLSHQPE*PTEASRRHPEVSLG Trigger: TCCTAAGGACACTTCAGGATGTCTTCTGCTGGCTTCCGTTGGCCACTCTGGTTGATGAGAAAGTCCTTGTTCTTCATGGTGGAGTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 90 bp | AGTTTAGCCAGAAGTTCCAGGTCTGTCTTGTCTGAGACTCCACCATaGAGAACAAGGACTTTCTCATCAACCAGAGTGGCCAACGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLARSSRSVLSETPP*RTRTFSSTRVANGS Trigger: GCTTCCGTTGGCCACTCTGGTTGATGAGAAAGTCCTTGTTCTTCATGGTGGAGTCTCAGACAAGACAGACCTGGAACTTCTGGCTAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 90 bp | TGGTTAACACCTTGCGGTTGTGACAGAACTCATAGCCCTCGGGTTTaGACTCATGCGAACGGATCAGGAGTTGCAGCTTGTATTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WLTPCGCDRTHSPRV*THANGSGVAACIFP Trigger: TGGAAAAATACAAGCTGCAACTCCTGATCCGTTCGCATGAGTGCAAACCCGAGGGCTATGAGTTCTGTCACAACCGCAAGGTGTTAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | AACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATCTCTCAAGAATTCATGGAGCTaGACCTGGTCTTGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSGPLEEQSVLLTTEPSLKNSWS*TWSCCP Trigger: TGGACAGCAAGACCAGGTCAAGCTCCATGAATTCTT...GAGAGATGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGTTATGCATCACTTCCTaGGTGAAGCCATATCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: YTPEEADRSTMNHNVVAGLCITS*VKPYRR Trigger: CCTACGATATGGCTTCACCAAGGAAGTGATGCATAA...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | TACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCGGGCGAACGGATCAGGAGTaGCAGCTTGTATTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YTPEEADRSTMNHNVVAGRTDQE*QLVFFH Trigger: ATGGAAAAATACAAGCTGCAACTCCTGATCCGTTCG...CCCGGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCAGGTCGCCTTGTTAGCTaGATACTGCACGATATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPGRLVS*ILHDMW Trigger: CCACATATCGTGCAGTATCAAGCTAACAAGGCGACC...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCTCCACAAAGTCACCATaGAACACGTATGCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SYTPEEADRSTMNHNVVASTKSP*NTYALS Trigger: AGAGAGAGCATACGTGTTCAATGGTGACTTTGTGGA...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | CTCTTAACCACTGAACCATCTCTCCAGTCCAAACAGGTAACTCTTGATTTGAATATGTGGCCATCCTTGTaGAAGTCGATGCTTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLTTEPSLQSKQVTLDLNMWPSL*KSMLLA Trigger: CGCCAGAAGCATCGACTTCAACAAGGATGGCCACAT...ATTCAAATCAAGAGTTACCTGTTTGGACTGGAGAGATGGTTCAGTGGTTAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | TCATACACACCAGAAGAGGCTGACAGATCCACTATGAACCACAATGTGGTTGCCCTTTCCTTTCTTGTTTaGCACCTCATGGTAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: SYTPEEADRSTMNHNVVALSFLV*HLMVET Trigger: TGTTTCTACCATGAGGTGCAAAACAAGAAAGGAAAG...GGCAACCACATTGTGGTTCATAGTGGATCTGTCAGCCTCTTCTGGTGTGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS GCA 90 bp | TCACTTTCCTTTCTTGTTTTGCACCTCATGGTAGAAACAATCTTGTaGCTGTCTAGTTTAGCCAGAAGTTCCAGGTCTGTCTTGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSFLVLHLMVETIL*LSSLARSSRSVLSE Trigger: CTCAGACAAGACAGACCTGGAACTTCTGGCTAAACTAGACAGGCACAAGATTGTTTCTACCATGAGGTGCAAAACAAGAAAGGAAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS-3UTR CAA 90 bp | GAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCATTCTTCCCATGTATCTaGTATTTATGCATCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELNSGPLEEQSVLLTTEPFFPCI*YLCITS Trigger: GGAAGTGATGCATAAATACAAGATACATGGGAAGAA...TGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201130.4 |
||
| CDS GCA 72 bp | CACTGTTCCAGTTCCAGGTCCACTGAGCGCCGCACCTaGCCCCGCCGGGATAGCTCCTTGCTGTTAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HCSSSRSTERRT*PRRDSSLLLGE Trigger: CTCCCCTAACAGCAAGGAGCTATCCCGGCGGGGGCAGGTGCGGCGCTCAGTGGACCTGGAACTGGAACAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 72 bp | CAGGCCCAAAGTAACAGCCTCCTCCTCGGACAGCGTTaGCCTTGCAGCCCTCCTGAGCCGCGGGATCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: QAQSNSLLLGQR*PCSPPEPRDHS Trigger: GGAGTGATCCCGCGGCTCAGGAGGGCTGCAAGGCCAACGCTGTCCGAGGAGGAGGCTGTTACTTTGGGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 72 bp | TGCAGGCAAGCAGAGGCGTGGCCCTCTAAGCAGGACTaGTCCACGAGGCGGAAGGCCTCCAGGAACTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: CRQAEAWPSKQD*STRRKASRNSL Trigger: CAATGAGTTCCTGGAGGCCTTCCGCCTCGTGGAGCAGTCCTGCTTAGAGGGCCACGCCTCTGCTTGCCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | CCTCCTCCTCGGACAGCGTTGGCCTTGCAGCCCTCCTaGGCCGCGGGATCACTCCACAGAATATCTACAACC | + |
|
Preference number: 6 (lower is better) Translates to: PPPRTALALQPS*AAGSLHRISTT Trigger: GGTTGTAGATATTCTGTGGAGTGATCCCGCGGCTCAGGAGGGCTGCAAGGCCAACGCTGTCCGAGGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 72 bp | CAAAGTAACAGCCTCCTCCTCGGACAGCGTTGGCCTTaGAGCCCTCCTGAGCCGCGGGATCACTCCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QSNSLLLGQRWP*SPPEPRDHSTE Trigger: TTCTGTGGAGTGATCCCGCGGCTCAGGAGGGCTGCAAGGCCAACGCTGTCCGAGGAGGAGGCTGTTACTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 72 bp | GTGGGTCGCCTTGTTAGCTTGATACTGCACGATATGTaGAGTCAGGGCTGGCCCCAGCTTGACGTAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VGRLVSLILHDM*SQGWPQLDVGS Trigger: GGAGCCTACGTCAAGCTGGGGCCAGCCCTGACTCCACATATCGTGCAGTATCAAGCTAACAAGGCGACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | TGCCTCATGGTTAGCCTGTGGGTCGCCTTGTTAGCTTaGTACTGCACGATATGTGGAGTCAGGGCTGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CLMVSLWVALLA*YCTICGVRAGP Trigger: GGGGCCAGCCCTGACTCCACATATCGTGCAGTATCAAGCTAACAAGGCGACCCACAGGCTAACCATGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 72 bp | GTTAGCTTGATACTGCACGATATGTGGAGTCAGGGCTaGCCCCAGCTTGACGTAGGCTCCTCTGTTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSLILHDMWSQG*PQLDVGSSVAA Trigger: GGCAGCAACAGAGGAGCCTACGTCAAGCTGGGGCCAGCCCTGACTCCACATATCGTGCAGTATCAAGCTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 90 bp | TCTAAGCAGGACTGCTCCACGAGGCGGAAGGCCTCCAGGAACTCATaGATGTCGATGTGGCCATCCTTGTTGAAGTCGATGCTTCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SKQDCSTRRKASRNS*MSMWPSLLKSMLLA Trigger: CGCCAGAAGCATCGACTTCAACAAGGATGGCCACATCGACATCAATGAGTTCCTGGAGGCCTTCCGCCTCGTGGAGCAGTCCTGCTTAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | ATCAGGGCCGCTGCCTTGAAGGCTTTCTCAGCGTTCTaGAACGCAAAGTGGTGCTGGGTGGATGAGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: IRAAALKAFSAF*NAKWCWVDELL Trigger: AAGCAGCTCATCCACCCAGCACCACTTTGCGTTTCAGAACGCTGAGAAAGCCTTCAAGGCAGCGGCCCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | CCTCTGTCTCCACGTCCTGGGCGAATCTCTCTTCGGTaGACATGCGGTTCAGGAAATCTCTCTCATGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSPRPGRISLR*TCGSGNLSHGG Trigger: GCCACCATGAGAGAGATTTCCTGAACCGCATGTTCACCGAAGAGAGATTCGCCCAGGACGTGGAGACAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | ACTGCACGATATGTGGAGTCAGGGCTGGCCCCAGCTTaGCGTAGGCTCCTCTGTTGCTGCCAACTTCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: TARYVESGLAPA*RRLLCCCQLHS Trigger: ACTATGAAGTTGGCAGCAACAGAGGAGCCTACGTCAAGCTGGGGCCAGCCCTGACTCCACATATCGTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 72 bp | CATGTAGCGCCGGTACCATCTCTGGATCAGGGCCGCTaGCTTGAAGGCTTTCTCAGCGTTCTGAAACGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: HVAPVPSLDQGR*LEGFLSVLKRK Trigger: TTTGCGTTTCAGAACGCTGAGAAAGCCTTCAAGGCAGCGGCCCTGATCCAGAGATGGTACCGGCGCTACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 72 bp | GCCCAGGTGAAAAGGCGAAGAGGGCAGAGAGCGGCTTaGAGGAAGAAACCACGGAGTAGGTTTCTGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AQVKRRRGQRAA*RKKPRSRFLSR Trigger: TCTGGACAGAAACCTACTCCGTGGTTTCTTCCTCAAAGCCGCTCTCTGCCCTCTTCGCCTTTTCACCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 90 bp | AAAGCCAGAGCCCAGGTGAAAAGGCGAAGAGGGCAGAGAGCGGCTTaGAGGAAGAAACCACGGAGTAGGTTTCTGTCCAGAGCTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KARAQVKRRRGQRAA*RKKPRSRFLSRACL Trigger: CAGACAAGCTCTGGACAGAAACCTACTCCGTGGTTTCTTCCTCAAAGCCGCTCTCTGCCCTCTTCGCCTTTTCACCTGGGCTCTGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 90 bp | CGGAAGGCCTCCAGGAACTCATTGATGTCGATGTGGCCATCCTTGTaGAAGTCGATGCTTCTGGCGAGGTCACAGATGCCGTCATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKASRNSLMSMWPSL*KSMLLARSQMPSSV Trigger: CACAGATGACGGCATCTGTGACCTCGCCAGAAGCATCGACTTCAACAAGGATGGCCACATCGACATCAATGAGTTCCTGGAGGCCTTCCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 90 bp | AGGCGGAAGGCCTCCAGGAACTCATTGATGTCGATGTGGCCATCCTaGTTGAAGTCGATGCTTCTGGCGAGGTCACAGATGCCGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RRKASRNSLMSMWPS*LKSMLLARSQMPSS Trigger: AGATGACGGCATCTGTGACCTCGCCAGAAGCATCGACTTCAACAAGGATGGCCACATCGACATCAATGAGTTCCTGGAGGCCTTCCGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | GTCCAACCAGGACCTGTATTCCAACACGTTATCCGCTaGACTATTCACCAGTTGTGGCCGCAGCATCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VQPGPVFQHVIR*TIHQLWPQHPP Trigger: TGGCGGATGCTGCGGCCACAACTGGTGAATAGTTCAGCGGATAACGTGTTGGAATACAGGTCCTGGTTGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 72 bp | CCTTGCGGTTGTGACAGAACTCATAGCCCTCGGGTTTaGACTCATGCGAACGGATCAGGAGTTGCAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PCGCDRTHSPRV*THANGSGVAAC Trigger: ACAAGCTGCAACTCCTGATCCGTTCGCATGAGTGCAAACCCGAGGGCTATGAGTTCTGTCACAACCGCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 72 bp | GATTCAAAATCTCCACCCTCCTCTGTCTCCACGTCCTaGGCGAATCTCTCTTCGGTGAACATGCGGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSKSPPSSVSTS*ANLSSVNMRFR Trigger: CCTGAACCGCATGTTCACCGAAGAGAGATTCGCCCAGGACGTGGAGACAGAGGAGGGTGGAGATTTTGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 72 bp | CTGGTCTCGTACAGAAGATTCAAGACGTATCGAGCATaGAGCTGTTGTCGCAGCCTGAAAGCTTCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LVSYRRFKTYRA*SCCRSLKASTR Trigger: CCTGGTGGAAGCTTTCAGGCTGCGACAACAGCTCCATGCTCGATACGTCTTGAATCTTCTGTACGAGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 72 bp | TCCAGGAACTCATTGATGTCGATGTGGCCATCCTTGTaGAAGTCGATGCTTCTGGCGAGGTCACAGATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRNSLMSMWPSL*KSMLLARSQMP Trigger: CGGCATCTGTGACCTCGCCAGAAGCATCGACTTCAACAAGGATGGCCACATCGACATCAATGAGTTCCTGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 72 bp | GCCTCCAGGAACTCATTGATGTCGATGTGGCCATCCTaGTTGAAGTCGATGCTTCTGGCGAGGTCACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: ASRNSLMSMWPS*LKSMLLARSQM Trigger: CATCTGTGACCTCGCCAGAAGCATCGACTTCAACAAGGATGGCCACATCGACATCAATGAGTTCCTGGAGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 90 bp | GAACTCATAGCCCTCGGGTTTGCACTCATGCGAACGGATCAGGAGTaGCAGCTTGTATTTTTCCATCAACCGTTCTGTCACGTCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ELIALGFALMRTDQE*QLVFFHQPFCHVRP Trigger: GGGCCTGACGTGACAGAACGGTTGATGGAAAAATACAAGCTGCAACTCCTGATCCGTTCGCATGAGTGCAAACCCGAGGGCTATGAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | TCGCGCTTCCTAAACTCAACAAGCAGGTCCGACGAATaGGCAAATAATTTCTGTCGAAGGGCTCTGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRFLNSTSRSDE*ANNFCRRALRA Trigger: GGCCCTCAGAGCCCTTCGACAGAAATTATTTGCTCATTCGTCGGACCTGCTTGTTGAGTTTAGGAAGCGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 72 bp | CCCTCGGGTTTGCACTCATGCGAACGGATCAGGAGTTaGAGCTTGTATTTTTCCATCAACCGTTCTGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: PSGLHSCERIRS*SLYFSINRSVT Trigger: CGTGACAGAACGGTTGATGGAAAAATACAAGCTGCAACTCCTGATCCGTTCGCATGAGTGCAAACCCGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 72 bp | GCCCTCGGGTTTGCACTCATGCGAACGGATCAGGAGTaGCAGCTTGTATTTTTCCATCAACCGTTCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALGFALMRTDQE*QLVFFHQPFCH Trigger: GTGACAGAACGGTTGATGGAAAAATACAAGCTGCAACTCCTGATCCGTTCGCATGAGTGCAAACCCGAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 72 bp | CACCATGAAGAACAAGGACTTTCTCATCAACCAGAGTaGCCAACGGAAGCCAGCAGAAGACATCCTGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HHEEQGLSHQPE*PTEASRRHPEV Trigger: CACTTCAGGATGTCTTCTGCTGGCTTCCGTTGGCCACTCTGGTTGATGAGAAAGTCCTTGTTCTTCATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 72 bp | GGTTTGCACTCATGCGAACGGATCAGGAGTTGCAGCTaGTATTTTTCCATCAACCGTTCTGTCACGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLHSCERIRSCS*YFSINRSVTSG Trigger: GCCTGACGTGACAGAACGGTTGATGGAAAAATACAAGCTGCAACTCCTGATCCGTTCGCATGAGTGCAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | ACAGATGCCGTCATCTGTGATGTCGATGCTCATATGTaGGCTGAAGAGCTTCCAAGTCTGCCTGAACTCATC | + |
|
Preference number: 6 (lower is better) Translates to: TDAVICDVDAHM*AEELPSLPELI Trigger: GATGAGTTCAGGCAGACTTGGAAGCTCTTCAGCTCACATATGAGCATCGACATCACAGATGACGGCATCTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 72 bp | CGTAGGCTCCTCTGTTGCTGCCAACTTCATAGTAGTTaGAGGCAGAAAAGATGGTTAACACCTTGCGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRLLCCCQLHSS*RQKRWLTPCGC Trigger: ACAACCGCAAGGTGTTAACCATCTTTTCTGCCTCCAACTACTATGAAGTTGGCAGCAACAGAGGAGCCTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CCA 72 bp | AGAAACCACGGAGTAGGTTTCTGTCCAGAGCTTGTCTaGTTATCTTTTCTCTTCTGCTCCTCTCGATTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RNHGVGFCPELV*LSFLFCSSRFS Trigger: TGAGAATCGAGAGGAGCAGAAGAGAAAAGATAACCAGACAAGCTCTGGACAGAAACCTACTCCGTGGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 72 bp | AAGGTAGCTGAAGAATTCATGGAGCTTGACCTGGTCTaGCTGTCCAGCATACTCTATAGACTGGAAGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: KVAEEFMELDLV*LSSILYRLEDV Trigger: AACATCTTCCAGTCTATAGAGTATGCTGGACAGCAAGACCAGGTCAAGCTCCATGAATTCTTCAGCTACCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 72 bp | TTTCTTGTTTTGCACCTCATGGTAGAAACAATCTTGTaGCTGTCTAGTTTAGCCAGAAGTTCCAGGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLVLHLMVETIL*LSSLARSSRSV Trigger: GACAGACCTGGAACTTCTGGCTAAACTAGACAGGCACAAGATTGTTTCTACCATGAGGTGCAAAACAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 72 bp | TTCTGCTCCTCTCGATTCTCACTTTCCTTTCTTGTTTaGCACCTCATGGTAGAAACAATCTTGTGCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FCSSRFSLSFLV*HLMVETILCLS Trigger: AGACAGGCACAAGATTGTTTCTACCATGAGGTGCAAAACAAGAAAGGAAAGTGAGAATCGAGAGGAGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS CAA 90 bp | TTCTCACTTTCCTTTCTTGTTTTGCACCTCATGGTAGAAACAATCTaGTGCCTGTCTAGTTTAGCCAGAAGTTCCAGGTCTGTCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSLSFLVLHLMVETI*CLSSLARSSRSVLS Trigger: AGACAAGACAGACCTGGAACTTCTGGCTAAACTAGACAGGCACAAGATTGTTTCTACCATGAGGTGCAAAACAAGAAAGGAAAGTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS TCA 72 bp | TCCCATGTATCTTGTATTTATGCATCACTTCCTTGGTaGAGCCATATCGTAGGTTCACTAGATGGTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SHVSCIYASLPW*SHIVGSLDGPH Trigger: ATGAGGACCATCTAGTGAACCTACGATATGGCTTCACCAAGGAAGTGATGCATAAATACAAGATACATGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||
| CDS GCA 72 bp | GTCCTTAGGATTTTCTTCCCATGTATCTTGTATTTATaGATCACTTCCTTGGTGAAGCCATATCGTAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLRIFFPCILYL*ITSLVKPYRRF Trigger: GAACCTACGATATGGCTTCACCAAGGAAGTGATGCATAAATACAAGATACATGGGAAGAAAATCCTAAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031359.9 ENSMUST00000201130.4 |
||