Pregenerated sensors for PPEF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062168Ensembl transcript IDs: ENSMUST00000071204.12, ENSMUST00000135856.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGTAAATCTCATCAACAGTTTGCTAAGGACTaGAAACACTCACATGATGCA | + |
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Preference number: 2 (lower is better) Translates to: VQTQFITGNPNTGSKSHQQFAKD*KHSHDA Trigger: TGCATCATGTGAGTGTTTGCAGTCCTTAGCAAACTG...TTGATGAGATTTACTTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| 3UTR CAA 90 bp | TTCAGTATGTTTCTAAATTTCTTTGATCTCCTGGTTAGGTATCATTaGAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCC | + |
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Preference number: 2 (lower is better) Translates to: FSMFLNFFDLLVRYH*RPILGPNPVYHWQS Trigger: GGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTCAAATGATACCTAACCAGGAGATCAAAGAAATTTAGAAACATACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| 3UTR TCA 72 bp | CCACTCACAGTTATTACCCCTAATTGTTTTCTCTCCTaGTCTCTGGGTTCCTTTCAGTATGTTTCTAAATTT | + |
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Preference number: 3 (lower is better) Translates to: PLTVITPNCFLS*SLGSFQYVSKF Trigger: AAATTTAGAAACATACTGAAAGGAACCCAGAGATCAGGAGAGAAAACAATTAGGGGTAATAACTGTGAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | AGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGTAAATCTCATCGGGCATAATGCTGTCTaGCCCTCAGTCGAGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RSKPSLSLAILTLEVNLIGHNAV*PSVELC Trigger: ACAGAGCTCGACTGAGGGTCAGACAGCATTATGCCC...GATGAGATTTACTTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | TACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGGGTCATCTGCATGGTTCCCTCTATTaGGGTGCAGGTCAGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: YYYEFQGAFVKTETWGHLHGSLY*GAGQRG Trigger: ACCCCTCTGACCTGCACCTCAATAGAGGGAACCATG...CAGATGACCCCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | TCATTTGAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCTAACAAGTCATCTCTATCCTTaGTTTGGCTTTCCCGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFETNTRSKPSLSLAILTSHLYP*FGFPAW Trigger: CCAGGCGGGAAAGCCAAATCAAGGATAGAGATGACT...TGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTCAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | GAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAATCGGGTTTACACTCATaGGACCTAATGAGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: ETNTRSKPSLSLAILTLESGLHS*DLMSIF Trigger: GAAGATGCTCATTAGGTCTCATGAGTGTAAACCCGA...TTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | GAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAATGTTGCTTGAAGGCCTaGAGAAGTATATGGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: ETNTRSKPSLSLAILTLECCLKA*RSIWMS Trigger: TGACATCCATATACTTCTTCAGGCCTTCAAGCAACA...TTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | TACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGGGTCATCTGTACCATAACTTAGTCTaGTGTAAGCTCCTCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: YYYEFQGAFVKTETWGHLYHNLV*CKLLGC Trigger: GCAACCGAGGAGCTTACATCAGACTAAGTTATGGTA...CAGATGACCCCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR GCA 90 bp | GAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGAGAAATTCGGCATTTaGTTCAGGACTTTCCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: ETNTRSKPSLSLAILTLEEKFGI*FRTFLA Trigger: AGCTAGGAAAGTCCTGAAGCAAATGCCGAATTTCTC...TTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | AGGTATCATTTGAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCCTGGATAGCTGCATTTaGCCTTGCTCGTCAGAATAT | + |
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Preference number: 4 (lower is better) Translates to: RYHLRPILGPNPVYHWQSLDSCI*PCSSEY Trigger: ATATTCTGACGAGCAAGGCCAAATGCAGCTATCCAG...GGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTCAAATGATACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | GAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGGAAAGGTTTTTACATaGGAGAAATTCGGCATTTGC | + |
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Preference number: 4 (lower is better) Translates to: ETNTRSKPSLSLAILTLEGKVFT*EKFGIC Trigger: GCAAATGCCGAATTTCTCTCATGTAAAAACCTTTCC...TTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | AGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGTAAATCTCATCATATCCCACCATGTATaGCCAGGATTTCGTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: RSKPSLSLAILTLEVNLIISHHV*PGFRCQ Trigger: TTGACAACGAAATCCTGGTCATACATGGTGGGATAT...GATGAGATTTACTTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | GTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGTAAATCTCATCAACAAGTCTGTGGATTCTaGTATCCCACCATGTATGAC | + |
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Preference number: 4 (lower is better) Translates to: VQTQFITGNPNTGSKSHQQVCGF*YPTMYD Trigger: GTCATACATGGTGGGATATCAGAATCCACAGACTTG...TTGATGAGATTTACTTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | AGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGTAAATCTCATCAAGAGGGTTCAGGCATaGTGTACTAGTTACTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: RSKPSLSLAILTLEVNLIKRVQA*CTSYLV Trigger: TACCAAGTAACTAGTACATCATGCCTGAACCCTCTT...GATGAGATTTACTTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | TGTGAATTAGGGTCTACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTTCTCTATCCTTGATTTaGCTTTCCCGCCTGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: CELGSTFLYYYEFQGAFVSLSLI*LSRLVL Trigger: CAACACCAGGCGGGAAAGCCAAATCAAGGATAGAGA...AACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGTAGACCCTAATTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | TTAGGGTCTACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTCTTAGAGGTAACATCTaGTCCAAAATAGCAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LGSTFLYYYEFQGAFVKTLRGNI*SKIAAP Trigger: GGGGGCTGCTATTTTGGACCAGATGTTACCTCTAAG...AGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGTAGACCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | ACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGTGTTGCCATCTTTGTTaGAGTCCACTATGCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: TFLYYYEFQGAFVKTETWCCHLC*SPLCWQ Trigger: TTGCCAGCATAGTGGACTTCAACAAAGATGGCAACA...CCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR GCA 90 bp | AGGTATCATTTGAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCAGCTGCATTTGGCCTTaGTCGTCAGAATATTCAATA | + |
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Preference number: 4 (lower is better) Translates to: RYHLRPILGPNPVYHWQSSCIWP*SSEYSI Trigger: TATTGAATATTCTGACGAGCAAGGCCAAATGCAGCT...GGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTCAAATGATACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | TACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGGGTCATCTGAATAATTGTACCGATTaGGAGCCAGGTATAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: YYYEFQGAFVKTETWGHLNNCTD*EPGIDF Trigger: GAAGTCTATACCTGGCTCCCAATCGGTACAATTATT...CAGATGACCCCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | GAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGATGTACTAGTTACTTaGTACTGGAAAAATTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: ETNTRSKPSLSLAILTLEDVLVT*YWKNCG Trigger: GCCACAATTTTTCCAGTACCAAGTAACTAGTACATC...TTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | ACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGCTTTGTAATGAGCATTaGAAAGTTTCCACATGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TFLYYYEFQGAFVKTETWLCNEH*KVSTWS Trigger: GGACCATGTGGAAACTTTTCAATGCTCATTACAAAG...CCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR GCA 90 bp | ACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGTGTAAGCTCCTCGGTTaGTGCCTTCTTCATAATAAT | + |
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Preference number: 4 (lower is better) Translates to: TFLYYYEFQGAFVKTETWCKLLG*CLLHNN Trigger: ATTATTATGAAGAAGGCAGCAACCGAGGAGCTTACA...CCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | GTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGTAAATCTCATCAATCATTAGGATCTCCATaGAATTGTTTCCTCGATCTA | + |
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Preference number: 4 (lower is better) Translates to: VQTQFITGNPNTGSKSHQSLGSP*NCFLDL Trigger: TAGATCGAGGAAACAATTCCATGGAGATCCTAATGA...TTGATGAGATTTACTTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | TTAGGGTCTACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGTGTATTCAAGTCTGTaGATTCTGATATCCCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LGSTFLYYYEFQGAFVKTVYSSL*ILISHH Trigger: ATGGTGGGATATCAGAATCCACAGACTTGAATACAC...AGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGTAGACCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR GCA 90 bp | ACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGTCATCCAGTTTCCCATaGAAATCACCACATATTGTT | + |
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Preference number: 4 (lower is better) Translates to: TFLYYYEFQGAFVKTETWSSSFP*KSPHIV Trigger: AACAATATGTGGTGATTTGCATGGGAAACTGGATGA...CCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | TATTTCAATAATAGTTTAGTATTCACCTCATCCCCAGCCACTCACAGTTATTACGGATATCGTCAAAGCTaGACATGTAGTCAACACTTC | + |
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Preference number: 4 (lower is better) Translates to: YFNNSLVFTSSPATHSYYGYRQS*TCSQHF Trigger: GAAGTGTTGACTACATGTCCAGCTTTGACGATATCC...GTAATAACTGTGAGTGGCTGGGGATGAGGTGAATACTAAACTATTATTGAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR GCA 90 bp | TGTGAATTAGGGTCTACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTATTTGTTCCCATTCTTaGTTTGTCAAGTCTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: CELGSTFLYYYEFQGAFVICSHS*FVKSSE Trigger: TTCTGAAGACTTGACAAAGCAAGAATGGGAACAAAT...AACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGTAGACCCTAATTCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | TTAGGGTCTACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTCTAGTTACTTGGTACTaGAAAAATTGTGGCATTGTA | + |
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Preference number: 4 (lower is better) Translates to: LGSTFLYYYEFQGAFVKTLVTWY*KNCGIV Trigger: TACAATGCCACAATTTTTCCAGTACCAAGTAACTAG...AGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGTAGACCCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR TCA 90 bp | TATTTCAATAATAGTTTAGTATTCACCTCATCCCCAGCCACTCACAGTTATTACGTAAAATTTCTTTTGTaGAGCCATACCTCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: YFNNSLVFTSSPATHSYYVKFLL*SHTSGS Trigger: TGAACCTGAGGTATGGCTTCACAAAAGAAATTTTAC...GTAATAACTGTGAGTGGCTGGGGATGAGGTGAATACTAAACTATTATTGAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CCA 90 bp | TATTTCAATAATAGTTTAGTATTCACCTCATCCCCAGCCACTCACAGTTATTACTTTCTTTGTAACTGGTaGAGTGTATTCAAGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: YFNNSLVFTSSPATHSYYFLCNW*SVFKSV Trigger: CACAGACTTGAATACACTCCACCAGTTACAAAGAAA...GTAATAACTGTGAGTGGCTGGGGATGAGGTGAATACTAAACTATTATTGAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| 3UTR CAA 72 bp | TTTCTAAATTTCTTTGATCTCCTGGTTAGGTATCATTaGAGACCAATACTAGGTCCAAACCCAGTTTATCAC | + |
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Preference number: 4 (lower is better) Translates to: FLNFFDLLVRYH*RPILGPNPVYH Trigger: GTGATAAACTGGGTTTGGACCTAGTATTGGTCTCAAATGATACCTAACCAGGAGATCAAAGAAATTTAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 90 bp | TGCTGTCTGACCCTCAGTCGAGCTCTGTACCGCCGGTACCAATTTTaGATGACTAACGCGGCTTTTATCACTTTCTTAGATTTGTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: CCLTLSRALYRRYQF*MTNAAFITFLDLLP Trigger: AGGCAACAAATCTAAGAAAGTGATAAAAGCCGCGTTAGTCATCCAAAATTGGTACCGGCGGTACAGAGCTCGACTGAGGGTCAGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 90 bp | TATCGTCAAAGCTGGACATGTAGTCAACACTTCCGCTGGAATCAATaGTTACCAGGTGTGAACTTAGAGATCTCCATGGTAAGTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: YRQSWTCSQHFRWNQ*LPGVNLEISMVSSA Trigger: GGCTGAACTTACCATGGAGATCTCTAAGTTCACACCTGGTAACCATTGATTCCAGCGGAAGTGTTGACTACATGTCCAGCTTTGACGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | TGTGAATTAGGGTCTACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTTCATGGTTCCCTCTATaGAGGTGCAGGTCAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: CELGSTFLYYYEFQGAFVSWFPL*RCRSEG Trigger: CCCCTCTGACCTGCACCTCAATAGAGGGAACCATGA...AACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGTAGACCCTAATTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | GTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGTAAATCTCATCAACTTTTCGCCAGTCTCTaGATTTCCCAACACTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VQTQFITGNPNTGSKSHQLFASL*ISQHWR Trigger: CCGCCAGTGTTGGGAAATCAAGAGACTGGCGAAAAG...TTGATGAGATTTACTTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | ACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGAGCCCCCTCCTCGGCTaGTGTTTGGATAACAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: TFLYYYEFQGAFVKTETWSPLLG*CLDNSL Trigger: AAGGCTGTTATCCAAACACAAGCCGAGGAGGGGGCT...CCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 90 bp | CAATACGGATATCGTCAAAGCTGGACATGTAGTCAACACTTCCGCTaGAATCAATGGTTACCAGGTGTGAACTTAGAGATCTCCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: QYGYRQSWTCSQHFR*NQWLPGVNLEISMV Trigger: TACCATGGAGATCTCTAAGTTCACACCTGGTAACCATTGATTCCAGCGGAAGTGTTGACTACATGTCCAGCTTTGACGATATCCGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS TCA 90 bp | ACTGGATTCCATAGCATTCATCCTTTGGTGAAGAGGGTTCAGGCATaGTGTACTAGTTACTTGGTACTGGAAAAATTGTGGCATTGTACC | + |
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Preference number: 5 (lower is better) Translates to: TGFHSIHPLVKRVQA*CTSYLVLEKLWHCT Trigger: GGTACAATGCCACAATTTTTCCAGTACCAAGTAACTAGTACATCATGCCTGAACCCTCTTCACCAAAGGATGAATGCTATGGAATCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | TACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGGGTCATCTGAGGATCTCCATGGAATaGTTTCCTCGATCTACAAAG | + |
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Preference number: 5 (lower is better) Translates to: YYYEFQGAFVKTETWGHLRISME*FPRSTK Trigger: CTTTGTAGATCGAGGAAACAATTCCATGGAGATCCT...CAGATGACCCCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | GTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAAGTAAATCTCATCAAGTTCCCATTCTTGCTTaGTCAAGTCTTCAGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: VQTQFITGNPNTGSKSHQVPILA*SSLQKE Trigger: CTCCTTCTGAAGACTTGACAAAGCAAGAATGGGAAC...TTGATGAGATTTACTTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | TGTGAATTAGGGTCTACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTCATAGCATTCATCCTTaGGTGAAGAGGGTTCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: CELGSTFLYYYEFQGAFVHSIHP*VKRVQA Trigger: TGCCTGAACCCTCTTCACCAAAGGATGAATGCTATG...AACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGTAGACCCTAATTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | AGGTATCATTTGAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCGGCAAGCTCATCAATTaGGGAATCATCTATATGAGC | + |
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Preference number: 5 (lower is better) Translates to: RYHLRPILGPNPVYHWQSGKLIN*GIIYMS Trigger: GCTCATATAGATGATTCCCAAATTGATGAGCTTGCC...GGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTCAAATGATACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | GAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAATCTACAAAGTCACCATaGAAAACGTATGGATTGTTC | + |
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Preference number: 5 (lower is better) Translates to: ETNTRSKPSLSLAILTLESTKSP*KTYGLF Trigger: GAACAATCCATACGTTTTCAATGGTGACTTTGTAGA...TTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | ACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTGAAACTTGGTCTTCAGAAGGAGTCTaGTCTGGTTCAACCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TFLYYYEFQGAFVKTETWSSEGV*SGSTFL Trigger: AAGGAAGGTTGAACCAGACAAGACTCCTTCTGAAGA...CCAAGTTTCAGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | GAGACCAATACTAGGTCCAAACCCAGTTTATCACTGGCAATCCTAACACTGGAATATTTGTTCCCATTCTaGCTTTGTCAAGTCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: ETNTRSKPSLSLAILTLEYLFPF*LCQVFR Trigger: TCTGAAGACTTGACAAAGCAAGAATGGGAACAAATA...TTCCAGTGTTAGGATTGCCAGTGATAAACTGGGTTTGGACCTAGTATTGGTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS TCA 90 bp | TTTAGTATCTTGAAAGCACTGGATTCCATAGCATTCATCCTTTGGTaGAGAGGGTTCAGGCATGATGTACTAGTTACTTGGTACTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: FSILKALDSIAFILW*RGFRHDVLVTWYWK Trigger: TTTCCAGTACCAAGTAACTAGTACATCATGCCTGAACCCTCTTCACCAAAGGATGAATGCTATGGAATCCAGTGCTTTCAAGATACTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 90 bp | AACACTGGCGGCATCAACACAGATTTCATTTTATTTCTTTGTAACTaGTGGAGTGTATTCAAGTCTGTGGATTCTGATATCCCACCATGT | + |
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Preference number: 5 (lower is better) Translates to: NTGGINTDFILFLCN*WSVFKSVDSDIPPC Trigger: ACATGGTGGGATATCAGAATCCACAGACTTGAATACACTCCACCAGTTACAAAGAAATAAAATGAAATCTGTGTTGATGCCGCCAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS TCA 90 bp | GCTCATCAATTTGGGAATCATCTATATGAGCTTTGTAATGAGCATTaGAAAGTTTCCACATGGTCCGAAATTCATCCATGGAGATCAGAC | + |
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Preference number: 5 (lower is better) Translates to: AHQFGNHLYELCNEH*KVSTWSEIHPWRSD Trigger: GTCTGATCTCCATGGATGAATTTCGGACCATGTGGAAACTTTTCAATGCTCATTACAAAGCTCATATAGATGATTCCCAAATTGATGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | TATTTCAATAATAGTTTAGTATTCACCTCATCCCCAGCCACTCACAGTTATTACAGAGAAATTCGGCATTaGCTTCAGGACTTTCCTAGC | + |
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Preference number: 5 (lower is better) Translates to: YFNNSLVFTSSPATHSYYREIRH*LQDFPS Trigger: GCTAGGAAAGTCCTGAAGCAAATGCCGAATTTCTCT...GTAATAACTGTGAGTGGCTGGGGATGAGGTGAATACTAAACTATTATTGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS TCA 90 bp | AAATCACCACATATTGTTATCTCTTTGGCGGGAAAGGTTTTTACATaGGAGAAATTCGGCATTTGCTTCAGGACTTTCCTAGCTTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: KSPHIVISLAGKVFT*EKFGICFRTFLASN Trigger: ATTTGAAGCTAGGAAAGTCCTGAAGCAAATGCCGAATTTCTCTCATGTAAAAACCTTTCCCGCCAAAGAGATAACAATATGTGGTGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071204.12 ENSMUST00000135856.2 |
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| CDS-3UTR CAA 90 bp | TTAGGGTCTACTTTTCTCTACTACTACGAATTTCAAGGGGCCTTTGTTAAGACTCAGAATGTCAACTATTaGTTCCCATTCTTGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LGSTFLYYYEFQGAFVKTQNVNY*FPFLLC Trigger: ACAAAGCAAGAATGGGAACAAATAGTTGACATTCTG...AGTCTTAACAAAGGCCCCTTGAAATTCGTAGTAGTAGAGAAAAGTAGACCCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS-3UTR CAA 90 bp | TATTTCAATAATAGTTTAGTATTCACCTCATCCCCAGCCACTCACAGTTATTACATGACCAGGATTTCGTaGTCAATAATTGTACCGATT | + |
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Preference number: 5 (lower is better) Translates to: YFNNSLVFTSSPATHSYYMTRIS*SIIVPI Trigger: AATCGGTACAATTATTGACAACGAAATCCTGGTCAT...GTAATAACTGTGAGTGGCTGGGGATGAGGTGAATACTAAACTATTATTGAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 72 bp | ACCCTCAGTCGAGCTCTGTACCGCCGGTACCAATTTTaGATGACTAACGCGGCTTTTATCACTTTCTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: TLSRALYRRYQF*MTNAAFITFLD Trigger: ATCTAAGAAAGTGATAAAAGCCGCGTTAGTCATCCAAAATTGGTACCGGCGGTACAGAGCTCGACTGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 72 bp | AGCTGGACATGTAGTCAACACTTCCGCTGGAATCAATaGTTACCAGGTGTGAACTTAGAGATCTCCATGGTA | + |
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Preference number: 6 (lower is better) Translates to: SWTCSQHFRWNQ*LPGVNLEISMV Trigger: TACCATGGAGATCTCTAAGTTCACACCTGGTAACCATTGATTCCAGCGGAAGTGTTGACTACATGTCCAGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS GCA 72 bp | ATGAACGAAAAGAAGCTGGATAGCTGCATTTGGCCTTaGTCGTCAGAATATTCAATAGACTGGAAGATGGCG | + |
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Preference number: 6 (lower is better) Translates to: MNEKKLDSCIWP*SSEYSIDWKMA Trigger: CGCCATCTTCCAGTCTATTGAATATTCTGACGAGCAAGGCCAAATGCAGCTATCCAGCTTCTTTTCGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 72 bp | TATCGTCAAAGCTGGACATGTAGTCAACACTTCCGCTaGAATCAATGGTTACCAGGTGTGAACTTAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: YRQSWTCSQHFR*NQWLPGVNLEI Trigger: GATCTCTAAGTTCACACCTGGTAACCATTGATTCCAGCGGAAGTGTTGACTACATGTCCAGCTTTGACGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 72 bp | TCCAACATGAACGAAAAGAAGCTGGATAGCTGCATTTaGCCTTGCTCGTCAGAATATTCAATAGACTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SNMNEKKLDSCI*PCSSEYSIDWK Trigger: CTTCCAGTCTATTGAATATTCTGACGAGCAAGGCCAAATGCAGCTATCCAGCTTCTTTTCGTTCATGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS TCA 72 bp | CATAGCATTCATCCTTTGGTGAAGAGGGTTCAGGCATaGTGTACTAGTTACTTGGTACTGGAAAAATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: HSIHPLVKRVQA*CTSYLVLEKLW Trigger: CCACAATTTTTCCAGTACCAAGTAACTAGTACATCATGCCTGAACCCTCTTCACCAAAGGATGAATGCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CAA 90 bp | CAGAAGGAGTCTTGTCTGGTTCAACCTTCCTTGGTTCAACATAATTaGACGCTGATTTATTTCTCTTTTCGCCAGTCTCTTGATTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: QKESCLVQPSLVQHN*TLIYFSFRQSLDFP Trigger: TGGGAAATCAAGAGACTGGCGAAAAGAGAAATAAATCAGCGTCAAATTATGTTGAACCAAGGAAGGTTGAACCAGACAAGACTCCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS TCA 72 bp | ACTGGAAAAATTGTGGCATTGTACCATAACTTAGTCTaGTGTAAGCTCCTCGGTTGCTGCCTTCTTCATAAT | + |
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Preference number: 6 (lower is better) Translates to: TGKIVALYHNLV*CKLLGCCLLHN Trigger: ATTATGAAGAAGGCAGCAACCGAGGAGCTTACATCAGACTAAGTTATGGTACAATGCCACAATTTTTCCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CCA 72 bp | GTTTCCCATGCAAATCACCACATATTGTTATCTCTTTaGCGGGAAAGGTTTTTACATGAGAGAAATTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: VSHANHHILLSL*RERFLHERNSA Trigger: TGCCGAATTTCTCTCATGTAAAAACCTTTCCCGCCAAAGAGATAACAATATGTGGTGATTTGCATGGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071204.12 ENSMUST00000135856.2 |
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| CDS CAA 90 bp | CCCAAAAAGTCATCTCTATCCTTGATTTGGCTTTCCCGCCTGGTGTaGTCAAAAATTCGAGTTACTAATGCTGAATCTTCATTATTTGTC | + |
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Preference number: 6 (lower is better) Translates to: PKKSSLSLIWLSRLV*SKIRVTNAESSLFV Trigger: GACAAATAATGAAGATTCAGCATTAGTAACTCGAATTTTTGACAACACCAGGCGGGAAAGCCAAATCAAGGATAGAGATGACTTTTTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071204.12 ENSMUST00000135856.2 |
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| CDS CCA 72 bp | ATTTCTCTTTTCGCCAGTCTCTTGATTTCCCAACACTaGCGGCATCAACACAGATTTCATTTTATTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ISLFASLLISQH*RHQHRFHFISL Trigger: CAAAGAAATAAAATGAAATCTGTGTTGATGCCGCCAGTGTTGGGAAATCAAGAGACTGGCGAAAAGAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CAA 72 bp | AGGTCAGATCGGTATCTGTACATAGTTTCAGTTAGATaGGACTTCATATCTTTCGTAGGCTTTTCAATACGG | + |
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Preference number: 6 (lower is better) Translates to: RSDRYLYIVSVR*DFISFVGFSIR Trigger: CCGTATTGAAAAGCCTACGAAAGATATGAAGTCCAATCTAACTGAAACTATGTACAGATACCGATCTGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CAA 72 bp | GCCTTTAAAAACTCATTAAAGTCGATGTTGCCATCTTaGTTGAAGTCCACTATGCTGGCAAGCTCATCAATT | + |
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Preference number: 6 (lower is better) Translates to: AFKNSLKSMLPS*LKSTMLASSSI Trigger: AATTGATGAGCTTGCCAGCATAGTGGACTTCAACAAAGATGGCAACATCGACTTTAATGAGTTTTTAAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CAA 90 bp | GTTGCCATCTTTGTTGAAGTCCACTATGCTGGCAAGCTCATCAATTaGGGAATCATCTATATGAGCTTTGTAATGAGCATTGAAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: VAIFVEVHYAGKLIN*GIIYMSFVMSIEKF Trigger: AAACTTTTCAATGCTCATTACAAAGCTCATATAGATGATTCCCAAATTGATGAGCTTGCCAGCATAGTGGACTTCAACAAAGATGGCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS TCA 72 bp | CCACATGGTCCGAAATTCATCCATGGAGATCAGACCTaGTTGATCACTGTCGATGATATTAAATATGATTTT | + |
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Preference number: 6 (lower is better) Translates to: PHGPKFIHGDQT*LITVDDIKYDF Trigger: AAAATCATATTTAATATCATCGACAGTGATCAATCAGGTCTGATCTCCATGGATGAATTTCGGACCATGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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| CDS CAA 90 bp | ATGATTTTCAGGTCAGATCGGTATCTGTACATAGTTTCAGTTAGATaGGACTTCATATCTTTCGTAGGCTTTTCAATACGGATATCGTCA | + |
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Preference number: 6 (lower is better) Translates to: MIFRSDRYLYIVSVR*DFISFVGFSIRISS Trigger: TGACGATATCCGTATTGAAAAGCCTACGAAAGATATGAAGTCCAATCTAACTGAAACTATGTACAGATACCGATCTGACCTGAAAATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071204.12 |
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