Pregenerated sensors for PPARGC1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033871Ensembl transcript IDs: ENSMUST00000063307.6, ENSMUST00000075299.13
Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGCAGTaGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGG | + |
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Preference number: 1 (lower is better) Translates to: TQDDPLEARTTLTWQ*NINSMETHGRTDGR Trigger: CCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR CCA 90 bp | AGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTaGCAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGAC | + |
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Preference number: 1 (lower is better) Translates to: RRTQDDPLEARTTLT*QWNINSMETHGRTD Trigger: GTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR TCA 90 bp | TCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTaGAAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SLARSLALLLIYSFL*KRKHIGRALSEVLR Trigger: CCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGTCAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCTTTCTCTCTCCTGTGTaGTCTCTCACGCTCACTCGC | + |
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Preference number: 2 (lower is better) Translates to: RKSVGWEGQRTTDSTWRRFLSPV*SLTLTR Trigger: GCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAA...GCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTGACTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTCAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCGGAACATCAACAGCATaGAAACTCACGGACGGACGG | + |
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Preference number: 2 (lower is better) Translates to: RKSVGWEGQRTTDSTWRRGTSTA*KLTDGR Trigger: CCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCC...GCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTGACTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR-3UTR TCA 90 bp | CAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCACCCAGGCCTTGTCTGAGGTATTaGGGTATTCCTCGAAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: QSGGRGRGRLTALGGAPRPCLRY*GIPRRL Trigger: TAACCTTCGAGGAATACCTCAATACCTCAGACAAGG...CCTGGGTGCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR-3UTR CAA 90 bp | CAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCACCCAGGGCCTTGTCTGAGGTATaGAGGTATTCCTCGAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: QSGGRGRGRLTALGGAPRALSEV*RYSSKV Trigger: AACCTTCGAGGAATACCTCAATACCTCAGACAAGGC...CCTGGGTGCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR-3UTR CAA 90 bp | CAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCACCCAGGCGGACGGAAGCAGCTTaGTTCAATGTAAACATTGAT | + |
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Preference number: 3 (lower is better) Translates to: QSGGRGRGRLTALGGAPRRTEAA*FNVNID Trigger: ATCAATGTTTACATTGAACAAAGCTGCTTCCGTCCG...CCTGGGTGCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR CCA 72 bp | GATCCGCTGGAAGCGAGGACGACGCTAACGTGGCAGTaGAACATCAACAGCATGGAAACTCACGGACGGACG | + |
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Preference number: 3 (lower is better) Translates to: DPLEARTTLTWQ*NINSMETHGRT Trigger: CGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGCGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR CCA 72 bp | CAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTaGCAGTGGAACATCAACAGCATGGAAACTCACGGA | + |
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Preference number: 3 (lower is better) Translates to: QDDPLEARTTLT*QWNINSMETHG Trigger: TCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR-3UTR CAA 90 bp | CAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGGACAGACGAAAACGTAAACATATaGGAAGGGCCTTGTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: QWNINSMETHGRTDGRTDENVNI*EGPCLR Trigger: CCTCAGACAAGGCCCTTCCAATATGTTTACGTTTTC...GTCTGTCCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| 3UTR-3UTR CAA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCCATATTGGAAGGGCCTaGTCTGAGGTATTGAGGTAT | + |
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Preference number: 3 (lower is better) Translates to: FKSFSLLCDLSRSLARSLHIGRA*SEVLRY Trigger: ATACCTCAATACCTCAGACAAGGCCCTTCCAATATG...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| 3UTR TCA 72 bp | TGTCATCATCACACTCTACAGACAGAAGATGTTATGTaGACACAGCTCAAGTCTAACAGAAGGAAGTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: CHHHTLQTEDVM*TQLKSNRRKSV Trigger: GACTGACTTCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | CAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCACCCAGGCCTCCTCCTCCTCTTTaGAGAGGAGCCGAGGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QSGGRGRGRLTALGGAPRPPPPL*RGAEGS Trigger: CGAGCCCTCGGCTCCTCTCCAAAGAGGAGGAGGAGG...CCTGGGTGCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR TCA 90 bp | CAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCACCCAGGGCTTGGGGTTCCATCTaGACAGGGCCCTCTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QSGGRGRGRLTALGGAPRAWGSI*TGPSAL Trigger: GAGAGCAGAGGGCCCTGTTCAGATGGAACCCCAAGC...CCTGGGTGCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGCGCCGCTTCCTGGCATaGCGGACGCTTGGGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TWRRTQDDPLEARTTLTWRRFLA*RTLGVP Trigger: TGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGGCG...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGAGGCCTGACTGTCCTTaGGGGGCCTGGGCCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: TWRRTQDDPLEARTTLTWRPDCP*GAWAWT Trigger: AGTCCAGGCCCAGGCCCCCCAAGGACAGTCAGGCCT...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | CAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCACCCAGGACTGGCCTTACTGGGTaGGCTCTGGTAGGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QSGGRGRGRLTALGGAPRTGLTG*ALVGAV Trigger: CACTGCCCCTACCAGAGCCCACCCAGTAAGGCCAGT...CCTGGGTGCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGTGGCAGGCCACGACCTaGTCTCTTCCTGCCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: TWRRTQDDPLEARTTLTWWQATT*SLPAPL Trigger: GAGTGGGGCAGGAAGAGACCAGGTCGTGGCCTGCCA...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR TCA 90 bp | CTCACGGACGGACGGACGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTGGGAGGGCTGACCCCTaGGTCCTCTCCTTCATCGTC | + |
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Preference number: 4 (lower is better) Translates to: LTDGRTDGQTDGSSFVQCGRADP*VLSFIV Trigger: GACGATGAAGGAGAGGACTCAGGGGTCAGCCCTCCC...ACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR GCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTAGCCGAGGGCTCGGGTaGGGAGTTGGGGAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLASRGLG*GVGEQA Trigger: AGCCTGCTCCCCAACTCCGCACCCGAGCCCTCGGCT...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR GCA 90 bp | GCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGCGCAGCACCTTCCTCTaGAGGGCAGCCTCTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ANVAVEHQQHGNSRTDGRRSTFL*RAASGL Trigger: CAGGCCAGAGGCTGCCCTGCAGAGGAAGGTGCTGCG...CCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR GCA 90 bp | CTCACGGACGGACGGACGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTCTGGTGACCAGGAGCTaGAGGACGAGGAGCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LTDGRTDGQTDGSSFVQCLVTRS*RTRSRN Trigger: GTTCCGGCTCCTCGTCCTGCAGCTCCTGGTCACCAG...ACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | AGGAAGTCAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCGGAGAGGTCAAGCTCTaGCAAGTCAGCACACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RKSVGWEGQRTTDSTWRRGEVKL*QVSTQL Trigger: CAGCTGTGTGCTGACTTGCCAGAGCTTGACCTCTCC...GCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTGACTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGGACAGACTTTCCCGCCGCTTCCTaGCATGCCGGACGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QWNINSMETHGRTDGRTDFPAAS*HAGRLG Trigger: CCCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAA...GTCTGTCCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR TCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTGCTGGGCTCTGTCTCTaGGGTCTCCGGGCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLAAGLCL*GLRAPL Trigger: CAGTGGTGCCCGGAGACCTCAGAGACAGAGCCCAGC...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR TCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTGCCGGGATCGGGGTTaGACCTGCCTGGAGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLACRDRG*TCLERL Trigger: CAGCCTCTCCAGGCAGGTTCAACCCCGATCCCGGCA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR TCA 90 bp | CTCACGGACGGACGGACGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTCTTCTGGCCAGCCTGTaGGACTGGTTGGGTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LTDGRTDGQTDGSSFVQCLLASL*DWLGCG Trigger: GCCACAACCCAACCAGTCTCACAGGCTGGCCAGAAG...ACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR TCA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGCTTGCTTTTCCCAGATaGGGGAAGGGACTCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: TWRRTQDDPLEARTTLTWLAFPR*GKGLLR Trigger: TCTGAGGAGTCCCTTCCCTCATCTGGGAAAAGCAAG...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGGAAGTGAGGTGCTTATaGAGTTCCGTACAAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: TWRRTQDDPLEARTTLTWEVRCL*SSVQGR Trigger: CCGGCCTTGTACGGAACTGCATAAGCACCTCACTTC...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACGTCTTGGGGCGAGGCTaGAGTCGGCCAAGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: AGSEDDANVAVEHQQHGNVLGRG*SRPRAW Trigger: CCAAGCCCTTGGCCGACTCCAGCCTCGCCCCAAGAC...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | CTCACGGACGGACGGACGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTCCAGGGACCCAGCTCTaGATTCAGTCTCCTGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: LTDGRTDGQTDGSSFVQCPGTQL*IQSPGA Trigger: CGCTCCAGGAGACTGAATCCAGAGCTGGGTCCCTGG...ACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGTCTTCCTCCAGGTTGTaGGTCTCTGTATCCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TWRRTQDDPLEARTTLTWSSSRL*VSVSRH Trigger: GTGCCTGGATACAGAGACCCACAACCTGGAGGAAGA...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCTCCAGGGCGGGGATCTaGGATCCCTGGGGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLSRAGI*DPWGSC Trigger: GCAGCTCCCCCAGGGATCCCAGATCCCCGCCCTGGA...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGTCTGGAAGTGGGCTGTaGGCAGCTTGGATCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: TWRRTQDDPLEARTTLTWSGSGL*AAWIFI Trigger: GATGAAGATCCAAGCTGCCCACAGCCCACTTCCAGA...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTGCCGACTGGCCTTACTaGGTGGGCTCTGGTAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLAADWPY*VGSGRG Trigger: GCCCCTACCAGAGCCCACCCAGTAAGGCCAGTCGGC...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | CTCACGGACGGACGGACGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTAGCAGAGCTGCCGACTaGCCTTACTGGGTGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LTDGRTDGQTDGSSFVQCSRAAD*PYWVGS Trigger: AGAGCCCACCCAGTAAGGCCAGTCGGCAGCTCTGCT...ACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGGACAGACCACGGCCTTCACCGATaGCCTTTTCCCGCCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QWNINSMETHGRTDGRTDHGLHR*PFPAAS Trigger: GGAAGCGGCGGGAAAAGGCCATCGGTGAAGGCCGTG...GTCTGTCCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR TCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGGGCAGCCTCTGGCCTaGGCACCTGGCAGTAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLGQPLA*APGSSR Trigger: ACGACTACTGCCAGGTGCTCAGGCCAGAGGCTGCCC...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR TCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTGGGAGGGCTGACCCCTaGGTCCTCTCCTTCATCGTC | + |
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Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLAGRADP*VLSFIV Trigger: GACGATGAAGGAGAGGACTCAGGGGTCAGCCCTCCC...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGAACTGAGGCTGGTCTaGGACCAGGTGGCCCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLELRLV*DQVAPS Trigger: GGACGGGGCCACCTGGTCCCAGACCAGCCTCAGTTC...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCAGGCCTGACTGTCCTTaGGGGGCCTGGGCCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLRPDCP*GAWAWT Trigger: AGTCCAGGCCCAGGCCCCCCAAGGACAGTCAGGCCT...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTGGCAGGCCACGACCTaGTCTCTTCCTGCCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLAWQATT*SLPAPL Trigger: GAGTGGGGCAGGAAGAGACCAGGTCGTGGCCTGCCA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTCTGGATTCAGTCTCCTaGAGCGCCGCACGGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLALDSVS*SAARGT Trigger: TGTGCCCCGTGCGGCGCTCCAGGAGACTGAATCCAG...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTCTGCAGGGCAGCCTCTaGCCTGAGCACCTGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLALQGSL*PEHLAV Trigger: TACTGCCAGGTGCTCAGGCCAGAGGCTGCCCTGCAG...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTCACGGCCTTCACCGATaGCCTTTTCCCGCCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLAHGLHR*PFPAAS Trigger: GGAAGCGGCGGGAAAAGGCCATCGGTGAAGGCCGTG...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCCAGAGCAGGGAGGGCTaGCCCCTGAGTCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLQSREG*PLSPLL Trigger: AAGGAGAGGACTCAGGGGTCAGCCCTCCCTGCTCTG...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGTCTCCGGGCACCACTaGAGCTCCCCAAAGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLVSGHH*SSPKHV Trigger: CACGTGCTTTGGGGAGCTGCAGTGGTGCCCGGAGAC...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTCGCTTCGCTCTGGGTaGCTCTTGGGCAGCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLASLRSG*LLGSLW Trigger: CCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTCACTGGCGTCCAGCTaGGAGAGGTCAAGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSEDDANVAVEHQQHGNSLASS*ERSSSG Trigger: GCCAGAGCTTGACCTCTCCCAGCTGGACGCCAGTGA...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTCGGGGCTGTACTGGCTaGGCTCTGTCTCTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLARGCTG*ALSLRS Trigger: AGACCTCAGAGACAGAGCCCAGCCAGTACAGCCCCG...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTCAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCTTCTCACTGTCAATCTaGAAGAGCTCGGAGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: RKSVGWEGQRTTDSTWRRFSLSI*KSSESS Trigger: CGATGACTCCGAGCTCTTCCAGATTGACAGTGAGAA...GCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTGACTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTGCCTTCATCCAGTTCTaGGAAGGCAGCCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLAAFIQF*EGSQPH Trigger: GTGGGGCTGGCTGCCTTCCCAGAACTGGATGAAGGC...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GGCAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGGACAGGGGGTCCTCCTCCATTaGCTTGTATGGAGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGTSTAWKLTDGRTDGQGVLLH*LVWRCG Trigger: ACCACACCTCCATACAAGCCAATGGAGGAGGACCCC...CTGTCCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACGCTCTGGGTGCCTCTTaGGCAGCTTGTGGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGSEDDANVAVEHQQHGNALGAS*AACGKL Trigger: GAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGC...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTAGAGGGGCACCCTGCTaGGCCAAGTCTTCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLARGAPC*AKSSRW Trigger: CCACCTTGAAGACTTGGCCCAGCAGGGTGCCCCTCT...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTACTGGCCTTACTGGGTaGGCTCTGGTAGGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLATGLTG*ALVGAV Trigger: CACTGCCCCTACCAGAGCCCACCCAGTAAGGCCAGT...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTAGCAGAGCTGCCGACTaGCCTTACTGGGTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLASRAAD*PYWVGS Trigger: AGAGCCCACCCAGTAAGGCCAGTCGGCAGCTCTGCT...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTGACTTCTGGAACTaGGGCTGGTCTGGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLADFWN*GWSGTR Trigger: CCTGGTCCCAGACCAGCCTCAGTTCCAGAAGTCAGC...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACGGGCAGCCTCTGGCCTaGGCACCTGGCAGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENGQPLA*APGSSR Trigger: ACGACTACTGCCAGGTGCTCAGGCCAGAGGCTGCCC...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACCTTCCGGGTGGCTGGTaGCCAGGAGCTGCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENLPGGW*PGAAGR Trigger: TCGTCCTGCAGCTCCTGGTCACCAGCCACCCGGAAG...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACCCTGCCTGGAGAGGCTaGTGCAGGCCTGGGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENPAWRG*CRPGGL Trigger: CAATCCCCCAGGCCTGCAGCAGCCTCTCCAGGCAGG...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | GCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGAGCTACTCTCGCCACTaGTGCTGCTGCTGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ANVAVEHQQHGNSRTDGRSYSRH*CCCCPQ Trigger: TTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTAGCT...CCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACGTCAGAGCTTGCTGTTaGGGAGGATGTGGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSEDDANVAVEHQQHGNVRACC*GGCGQE Trigger: CTCCTGGCCACATCCTCCCCAACAGCAAGCTCTGAC...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCACCTGGAGGAGTCTCTaGAAGTGGGCTGTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLTWRSL*KWAVGS Trigger: GCTGCCCACAGCCCACTTCCAGAGACTCCTCCAGGT...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATGTACAAGGCCGGCTCTaGGCCCGCAGTGTGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADVQGRL*ARSVGV Trigger: GACCCCCACACTGCGGGCTCAGAGCCGGCCTTGTAC...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | GCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGTCTTGGGGGAAGCAGTaGTTCTCACCTCTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ANVAVEHQQHGNSRTDGRSWGKQ*FSPLLP Trigger: TGGCAGAAGAGGTGAGAATCACTGCTTCCCCCAAGA...CCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | CAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGGACAGACGCCCAAAGTGCTTTGTaGGACTGGCACGGATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QWNINSMETHGRTDGRTDAQSAL*DWHGSH Trigger: ATGAGATCCGTGCCAGTCTCACAAAGCACTTTGGGC...GTCTGTCCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTGGGTTGTGGCATGCTaGAAATGGGACAGGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGSEDDANVAVEHQQHGNWVVAC*KWDRSS Trigger: CGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCA...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTCCAGCAGCCCAAAGTaGTTTGTGAGACTGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSEDDANVAVEHQQHGNSSSPK*FVRLAR Trigger: CCGTGCCAGTCTCACAAAGCACTTTGGGCTGCTGGA...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGGGGGTCTTCTTATCCTaGGTGCCATCCACCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ANVAVEHQQHGNSRTDGRGVFLS*VPSTLT Trigger: TGTCAAGGTGGATGGCACCCAGGATAAGAAGACCCC...CCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTCTTCCTCCCTAGTTTaGTCCATGGCAGGCCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLASSSLV*SMAGHD Trigger: GTCGTGGCCTGCCATGGACCAAACTAGGGAGGAAGA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGTGGCATGCTGCAAATaGGACAGGAGCTCGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLVACCK*DRSSLR Trigger: GCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCAC...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGCTGGCACGGATCTCATaGTCTCTTAGCTGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ANVAVEHQQHGNSRTDGRLARIS*SLSCML Trigger: CAGCATGCAGCTAAGAGACCATGAGATCCGTGCCAG...CCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACGCTTGGGGTTCCATCTaGACAGGGCCCTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENAWGSI*TGPSAL Trigger: GAGAGCAGAGGGCCCTGTTCAGATGGAACCCCAAGC...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTCTTGCTTTTCCCAGATaGGGGAAGGGACTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLALAFPR*GKGLLR Trigger: TCTGAGGAGTCCCTTCCCTCATCTGGGAAAAGCAAG...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACCAGGTGAGGCTGGGGTaGAGGATGGTGTGTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENQVRLG*RMVCRL Trigger: AAGGCGACACACCATCCTGCACCCCAGCCTCACCTG...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATGTCTTGGGGCGAGGCTaGAGTCGGCCAAGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADVLGRG*SRPRAW Trigger: CCAAGCCCTTGGCCGACTCCAGCCTCGCCCCAAGAC...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACCCAGGGACCCAGCTCTaGATTCAGTCTCCTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENPGTQL*IQSPGA Trigger: CGCTCCAGGAGACTGAATCCAGAGCTGGGTCCCTGG...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACCTGGGAGCTGTGTCTTaGCCTGGGCTGAGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENLGAVS*PGLSLV Trigger: CACCAAGCTCAGCCCAGGCCAAGACACAGCTCCCAG...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATCGGGGGAGGGAAGGCTaGGAGCTGTGTCTTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADRGREG*ELCLGL Trigger: CAGGCCAAGACACAGCTCCCAGCCTTCCCTCCCCCG...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTGCATGCTGTCCTTGTaGGTAGGGTCACAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLACMLSL*VGSQFW Trigger: CCAGAACTGTGACCCTACCCACAAGGACAGCATGCA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTCATAGTCAGTGTATCTaGGCCAACGGAAGTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLAHSQCI*ANGSAG Trigger: TCCGGCACTTCCGTTGGCCCAGATACACTGACTATG...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGTACAAGGCCGGCTCTaGGCCCGCAGTGTGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKVQGRL*ARSVGV Trigger: GACCCCCACACTGCGGGCTCAGAGCCGGCCTTGTAC...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATCAGAGCAGGGAGGGCTaGCCCCTGAGTCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADQSREG*PLSPLL Trigger: AAGGAGAGGACTCAGGGGTCAGCCCTCCCTGCTCTG...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCCTCTTCAAGGCCTTCTaGAGACCTGCGTGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLLFKAF*RPACQR Trigger: TCTCTGACACGCAGGTCTGCAGAAGGCCTTGAAGAG...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063307.6 |
||
| CDS-3UTR GCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATCTGGTGACCAGGAGCTaGAGGACGAGGAGCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADLVTRS*RTRSRN Trigger: GTTCCGGCTCCTCGTCCTGCAGCTCCTGGTCACCAG...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | CGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTAAACATTGATTTGTTTGAACTGAGGCTGGTCTaGGACCAGGTGGCCCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTDRRTEAALFNVNIDLFELRLV*DQVAPS Trigger: GGACGGGGCCACCTGGTCCCAGACCAGCCTCAGTTC...AAACAAATCAATGTTTACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | CGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTAAACATTGATTTGTTTGCCGACTGGCCTTACTaGGTGGGCTCTGGTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTDRRTEAALFNVNIDLFADWPY*VGSGRG Trigger: GCCCCTACCAGAGCCCACCCAGTAAGGCCAGTCGGC...AAACAAATCAATGTTTACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCCAATGCAGGCTCTGCTaGGCCTCTTTCAGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLQCRLC*ASFSKL Trigger: CAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTG...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGCTGGGCTCTGTCTCTaGGGTCTCCGGGCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKAGLCL*GLRAPL Trigger: CAGTGGTGCCCGGAGACCTCAGAGACAGAGCCCAGC...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTGTGGTGGGTGGCGTaGGTCCTGCCGTGCCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKVWWVA*VLPCRK Trigger: TTTGCGGCACGGCAGGACTCACGCCACCCACCACAC...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGCCTGCCTGGAGAGGCTaGTGCAGGCCTGGGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKPAWRG*CRPGGL Trigger: CAATCCCCCAGGCCTGCAGCAGCCTCTCCAGGCAGG...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACGACCTGGTCTCTTCCTaGCCCACTCCTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENDLVSS*PTPLLP Trigger: AGGAAGAAGAGGAGTGGGGCAGGAAGAGACCAGGTC...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGCGCAGCACCTTCCTCTaGAGGGCAGCCTCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKRSTFL*RAASGL Trigger: CAGGCCAGAGGCTGCCCTGCAGAGGAAGGTGCTGCG...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACCGCCACTGCTGCTGCTaGTGTCCTCAAATACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENRHCCC*CPQIRC Trigger: ACACCGTATTTGAGGACAGCAGCAGCAGCAGTGGCG...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCTACTCTCGCCACTGCTaGTGCTGCTGTCCTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLYSRHC*CCCPQI Trigger: TATTTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTA...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGCGCCGCTTCCTGGCATaGCGGACGCTTGGGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKRRFLA*RTLGVP Trigger: TGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGGCG...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACCCATGGCTTCGTACTTaGTTTTCCCAGATGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSEDDANVAVEHQQHGNPWLRT*FSQMRE Trigger: TTCCCTCATCTGGGAAAAGCAAGTACGAAGCCATGG...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATTCACTGGCGTCCAGCTaGGAGAGGTCAAGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADSLASS*ERSSSG Trigger: GCCAGAGCTTGACCTCTCCCAGCTGGACGCCAGTGA...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACCTGAGTCAAAGTCACTaGCGTCCAGCTGGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENLSQSH*RPAGRG Trigger: ACCTCTCCCAGCTGGACGCCAGTGACTTTGACTCAG...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTTCTCACTGTCAATCTaGAAGAGCTCGGAGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLAFSLSI*KSSESS Trigger: CGATGACTCCGAGCTCTTCCAGATTGACAGTGAGAA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGTCTCCAGGGTGGGGCTaGGGGGTGCAGATAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKSPGWG*GVQIRG Trigger: CCCCCTTATCTGCACCCCCCAGCCCCACCCTGGAGA...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGAAGTCAGTCGTCTCCAGGGTGGGGCTaGGGGGTGCAGATAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQKMLCEHSSSLTEGSQSSPGWG*GVQIRG Trigger: CCCCCTTATCTGCACCCCCCAGCCCCACCCTGGAGA...CGACTGACTTCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTCACAGAGGATATCTTaGGCCAGAAGTTCCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFSLLCDLSRSLARSLASQRIS*ARSSLR Trigger: CCTAAGGGAACTTCTGGCCCAAGATATCCTCTGTGA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACTCACAGAGGATATCTTaGGCCAGAAGTTCCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSEDDANVAVEHQQHGNSQRIS*ARSSLR Trigger: CCTAAGGGAACTTCTGGCCCAAGATATCCTCTGTGA...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACAGGAGTCTCTGGAAGTaGGCTGTGGGCAGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENRSLWK*AVGSLD Trigger: ATCCAAGCTGCCCACAGCCCACTTCCAGAGACTCCT...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGCGGGGGAGGGAAGGCTaGGAGCTGTGTCTTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKRGREG*ELCLGL Trigger: CAGGCCAAGACACAGCTCCCAGCCTTCCCTCCCCCG...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATCTTGTGGGAAGCTCCTaGGGTGGCTGTGAGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADLVGSS*GGCERK Trigger: CTTCCGCTCACAGCCACCCCAGGAGCTTCCCACAAG...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATAGAGGGGCACCCTGCTaGGCCAAGTCTTCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADRGAPC*AKSSRW Trigger: CCACCTTGAAGACTTGGCCCAGCAGGGTGCCCCTCT...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGTTTCCCGCCGCTTCCTaGCATGCCGGACGCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKFPAAS*HAGRLG Trigger: CCCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAA...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCTGTCAGAGAGATAGTTaGGGAAGAAGGACGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKSFSLLCDLSRSLARSLCQRDS*GRRTRA Trigger: AGCTCTCGTCCTTCTTCCTCAACTATCTCTCTGACA...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACGCCCAAAGTGCTTTGTaGGACTGGCACGGATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENAQSAL*DWHGSH Trigger: ATGAGATCCGTGCCAGTCTCACAAAGCACTTTGGGC...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTCTCCGGGCACCACTaGAGCTCCCCAAAGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKVSGHH*SSPKHV Trigger: CACGTGCTTTGGGGAGCTGCAGTGGTGCCCGGAGAC...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR GCA 90 bp | ACAATGTCATCATCACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAAAGCCGAGGGCTCGGGTaGGGAGTTGGGGAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMSSSHSTDRRCYVNTAQSRGLG*GVGEQA Trigger: AGCCTGCTCCCCAACTCCGCACCCGAGCCCTCGGCT...TTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATGTCAGAGCTTGCTGTTaGGGAGGATGTGGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADVRACC*GGCGQE Trigger: CTCCTGGCCACATCCTCCCCAACAGCAAGCTCTGAC...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGCCTCCTCCTCCTCTTTaGAGAGGAGCCGAGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKPPPPL*RGAEGS Trigger: CGAGCCCTCGGCTCCTCTCCAAAGAGGAGGAGGAGG...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACTCTTCCTCCAGGTTGTaGGTCTCTGTATCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENSSSRL*VSVSRH Trigger: GTGCCTGGATACAGAGACCCACAACCTGGAGGAAGA...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | ACAATGTCATCATCACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAATCCAGGGCGGGGATCTaGGATCCCTGGGGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TMSSSHSTDRRCYVNTAQSRAGI*DPWGSC Trigger: GCAGCTCCCCCAGGGATCCCAGATCCCCGCCCTGGA...TTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATGTGGCATGCTGCAAATaGGACAGGAGCTCGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADVACCK*DRSSLR Trigger: GCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCAC...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGCTGCAGGGCAGCCTCTaGCCTGAGCACCTGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKLQGSL*PEHLAV Trigger: TACTGCCAGGTGCTCAGGCCAGAGGCTGCCCTGCAG...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACTGCATGCTGTCCTTGTaGGTAGGGTCACAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENCMLSL*VGSQFW Trigger: CCAGAACTGTGACCCTACCCACAAGGACAGCATGCA...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACCTTCTCGTCAGCACCTaGCACTCTACAATCTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENLLVST*HSTISP Trigger: CGGTGAGATTGTAGAGTGCCAGGTGCTGACGAGAAG...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGCTTCTGGCCAGCCTGTaGGACTGGTTGGGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKLLASL*DWLGCG Trigger: GCCACAACCCAACCAGTCTCACAGGCTGGCCAGAAG...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCATCATCACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAACTTCCGGGTGGCTGGTaGCCAGGAGCTGCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: TMSSSHSTDRRCYVNTAQLPGGW*PGAAGR Trigger: TCGTCCTGCAGCTCCTGGTCACCAGCCACCCGGAAG...TTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATAGCTACTCTCGCCACTaGTGCTGCTGCTGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADSYSRH*CCCCPQ Trigger: TTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTAGCT...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATGGAGAGGTCAAGCTCTaGCAAGTCAGCACACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADGEVKL*QVSTQL Trigger: CAGCTGTGTGCTGACTTGCCAGAGCTTGACCTCTCC...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATGCTCCCCAAAGCACGTaGCTGAGTCAAAGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADAPQST*LSQSHW Trigger: CCAGTGACTTTGACTCAGCCACGTGCTTTGGGGAGC...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | CGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTAAACATTGATTTGTTTTCATCGGGGCTGTACTaGCTGGGCTCTGTCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTDRRTEAALFNVNIDLFSSGLY*LGSVSE Trigger: CTCAGAGACAGAGCCCAGCCAGTACAGCCCCGATGA...AAACAAATCAATGTTTACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGAAGTCAGTCGGCCTTCATCCAGTTCTaGGAAGGCAGCCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQKMLCEHSSSLTEGSQSAFIQF*EGSQPH Trigger: GTGGGGCTGGCTGCCTTCCCAGAACTGGATGAAGGC...CGACTGACTTCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGACCTGGAGGAGTCTCTaGAAGTGGGCTGTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKTWRSL*KWAVGS Trigger: GCTGCCCACAGCCCACTTCCAGAGACTCCTCCAGGT...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATGGGGTCCTCCTCCATTaGCTTGTATGGAGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADGVLLH*LVWRCG Trigger: ACCACACCTCCATACAAGCCAATGGAGGAGGACCCC...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGCTCTGGGTGCCTCTTaGGCAGCTTGTGGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKALGAS*AACGKL Trigger: GAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGC...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGAGGGCAGCACCGAAGTaGGGTGCTTATGCAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKRAAPK*GAYAVP Trigger: CGGAACTGCATAAGCACCTCACTTCGGTGCTGCCCT...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | ACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGACAGGTGAGGCTGGGGTaGAGGATGGTGTGTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLYRQKMLCEHSSSLTEGQVRLG*RMVCRL Trigger: AAGGCGACACACCATCCTGCACCCCAGCCTCACCTG...TCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGTCATCGGGGCTGTACTaGCTGGGCTCTGTCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKSSGLY*LGSVSE Trigger: CTCAGAGACAGAGCCCAGCCAGTACAGCCCCGATGA...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGAGCTGTGTCTTGGCCTaGGCTGAGCTTGGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKSCVLA*AELGVW Trigger: CCAGACACCAAGCTCAGCCCAGGCCAAGACACAGCT...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGACTTGTGGGAAGCTCCTaGGGTGGCTGTGAGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLYRQKMLCEHSSSLTEGLVGSS*GGCERK Trigger: CTTCCGCTCACAGCCACCCCAGGAGCTTCCCACAAG...TCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATCTGGCACGGATCTCATaGTCTCTTAGCTGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGRALSEVLRYSSKVKADLARIS*SLSCML Trigger: CAGCATGCAGCTAAGAGACCATGAGATCCGTGCCAG...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | CGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTAAACATTGATTTGTTTAAGAGAGTCGCTTTGTaGCAAGGCCAGCATGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTDRRTEAALFNVNIDLFKRVAL*QGQHEA Trigger: TGCCTCATGCTGGCCTTGTCACAAAGCGACTCTCTT...AAACAAATCAATGTTTACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGACCTGGTCTCTTCCTaGCCCACTCCTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKDLVSS*PTPLLP Trigger: AGGAAGAAGAGGAGTGGGGCAGGAAGAGACCAGGTC...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGTGGGTTGTGGCATGCTaGAAATGGGACAGGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKWVVAC*KWDRSS Trigger: CGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCA...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGGTTGGGTTGTGGCATaGTGCAAATGGGACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKGWVVA*CKWDRS Trigger: GCTCCTGTCCCATTTGCAGCATGCCACAACCCAACC...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGGTTGGGTTGTGGCATaGTGCAAATGGGACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKGWVVA*CKWDRS Trigger: GCTCCTGTCCCATTTGCAGCATGCCACAACCCAACC...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGTCCAGCAGCCCAAAGTaGTTTGTGAGACTGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKSSSPK*FVRLAR Trigger: CCGTGCCAGTCTCACAAAGCACTTTGGGCTGCTGGA...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGAAGTCAGTCGGCTCCCCAAAGCACGTaGCTGAGTCAAAGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQKMLCEHSSSLTEGSQSAPQST*LSQSHW Trigger: CCAGTGACTTTGACTCAGCCACGTGCTTTGGGGAGC...CGACTGACTTCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCATCATCACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAACGGGGCTGTACTGGCTaGGCTCTGTCTCTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TMSSSHSTDRRCYVNTAQRGCTG*ALSLRS Trigger: AGACCTCAGAGACAGAGCCCAGCCAGTACAGCCCCG...TTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGAAGTCAGTCGTCTTCCTCCCTAGTTTaGTCCATGGCAGGCCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQKMLCEHSSSLTEGSQSSSSLV*SMAGHD Trigger: GTCGTGGCCTGCCATGGACCAAACTAGGGAGGAAGA...CGACTGACTTCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGAGGAGTCTCTGGAAGTaGGCTGTGGGCAGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKRSLWK*AVGSLD Trigger: ATCCAAGCTGCCCACAGCCCACTTCCAGAGACTCCT...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGCTCCATTGGCTTGTATaGAGGTGTGGTGGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKLHWLV*RCGGWR Trigger: ACGCCACCCACCACACCTCCATACAAGCCAATGGAG...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCATCATCACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAACTGGGAGCTGTGTCTTaGCCTGGGCTGAGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TMSSSHSTDRRCYVNTAQLGAVS*PGLSLV Trigger: CACCAAGCTCAGCCCAGGCCAAGACACAGCTCCCAG...TTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | CGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTAAACATTGATTTGTTTCTTCTCGTCAGCACCTaGCACTCTACAATCTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RTDRRTEAALFNVNIDLFLLVST*HSTISP Trigger: CGGTGAGATTGTAGAGTGCCAGGTGCTGACGAGAAG...AAACAAATCAATGTTTACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGTCTTGGGGGAAGCAGTaGTTCTCACCTCTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKSWGKQ*FSPLLP Trigger: TGGCAGAAGAGGTGAGAATCACTGCTTCCCCCAAGA...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGAAGAGAGTCGCTTTGTaGCAAGGCCAGCATGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKKRVAL*QGQHEA Trigger: TGCCTCATGCTGGCCTTGTCACAAAGCGACTCTCTT...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGAAGTGAGGTGCTTATaGAGTTCCGTACAAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKEVRCL*SSVQGR Trigger: CCGGCCTTGTACGGAACTGCATAAGCACCTCACTTC...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGGGGTCTTCTTATCCTaGGTGCCATCCACCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKGVFLS*VPSTLT Trigger: TGTCAAGGTGGATGGCACCCAGGATAAGAAGACCCC...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGTCTGGAAGTGGGCTGTaGGCAGCTTGGATCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKSGSGL*AAWIFI Trigger: GATGAAGATCCAAGCTGCCCACAGCCCACTTCCAGA...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGCATAGTCAGTGTATCTaGGCCAACGGAAGTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKHSQCI*ANGSAG Trigger: TCCGGCACTTCCGTTGGCCCAGATACACTGACTATG...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGCAATGCAGGCTCTGCTaGGCCTCTTTCAGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKQCRLC*ASFSKL Trigger: CAGCTTACTGAAAGAGGCCCAGCAGAGCCTGCATTG...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | CGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTAAACATTGATTTGTTTTCATGGTCTCTTAGCTaGATGCTGTCCTTGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTDRRTEAALFNVNIDLFSWSLS*MLSLWV Trigger: TACCCACAAGGACAGCATGCAGCTAAGAGACCATGA...AAACAAATCAATGTTTACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCATCATCACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAACGCCACTGCTGCTGCTaGTGTCCTCAAATACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TMSSSHSTDRRCYVNTAQRHCCC*CPQIRC Trigger: ACACCGTATTTGAGGACAGCAGCAGCAGCAGTGGCG...TTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCATCATCACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAACTCCATTGGCTTGTATaGAGGTGTGGTGGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TMSSSHSTDRRCYVNTAQLHWLV*RCGGWR Trigger: ACGCCACCCACCACACCTCCATACAAGCCAATGGAG...TTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACGAGAGCTCATGTCACTaGAGAGATTTCGAATGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ARSLARSLSFSYTLFFENESSCH*RDFECI Trigger: TATACATTCGAAATCTCTCCAGTGACATGAGCTCTC...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGTCATGGTCTCTTAGCTaGATGCTGTCCTTGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKSWSLS*MLSLWV Trigger: TACCCACAAGGACAGCATGCAGCTAAGAGACCATGA...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGCCATGGCTTCGTACTTaGTTTTCCCAGATGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHIGRALSEVLRYSSKPWLRT*FSQMRE Trigger: TTCCCTCATCTGGGAAAAGCAAGTACGAAGCCATGG...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR TCA 90 bp | ACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGATGTCAGAGAGATAGTTaGGGAAGAAGGACGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLYRQKMLCEHSSSLTEGCQRDS*GRRTRA Trigger: AGCTCTCGTCCTTCTTCCTCAACTATCTCTCTGACA...TCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCATCATCACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAATACTCTCGCCACTGCTaGTGCTGCTGTCCTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TMSSSHSTDRRCYVNTAQYSRHC*CCCPQI Trigger: TATTTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTA...TTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGTGATGATGACATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | CGGACGGACAGACGGACGGAAGCAGCTTTGTTCAATGTAAACATTGATTTGTTTGAGAGCTCATGTCACTaGAGAGATTTCGAATGTATA | + |
|
Preference number: 4 (lower is better) Translates to: RTDRRTEAALFNVNIDLFESSCH*RDFECI Trigger: TATACATTCGAAATCTCTCCAGTGACATGAGCTCTC...AAACAAATCAATGTTTACATTGAACAAAGCTGCTTCCGTCCGTCTGTCCGTCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGAGCTGTCAAAATCCATaGCTTCGTACTTGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHIGRALSEVLRYSSKVKSCQNP*LRTCFS Trigger: GGAAAAGCAAGTACGAAGCCATGGATTTTGACAGCT...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CCA 90 bp | ACACTCTACAGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGAAGCTGTCAAAATCCATaGCTTCGTACTTGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLYRQKMLCEHSSSLTEGSCQNP*LRTCFS Trigger: GGAAAAGCAAGTACGAAGCCATGGATTTTGACAGCT...TCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCTGTAGAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | GGCTGGGCACTGTCGGGGCTGGCCGTGTCCTGTGCTAGGGAGTCTTaGGGCGAGGCTGGAGTCGGCCAAGGGCTTGGGCAATCCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWALSGLAVSCARES*GEAGVGQGLGQSSP Trigger: GGGGGAGGATTGCCCAAGCCCTTGGCCGACTCCAGCCTCGCCCCAAGACTCCCTAGCACAGGACACGGCCAGCCCCGACAGTGCCCAGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | CAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCACCCAGGTGGCTCTGGGGCCCGTaGGGGCAGCTTCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSGGRGRGRLTALGGAPRWLWGP*GQLPLR Trigger: CCTCAGAGGAAGCTGCCCCAACGGGCCCCAGAGCCA...CCTGGGTGCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | CTCGCTTCGCTCTGGGTGCCTCTTGGGCAGCTTGTGGGAAGCTCCTaGGGTGGCTGTGAGCGGAAGAGCCTCGGGGGAGGGAAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LASLWVPLGQLVGSS*GGCERKSLGGGKAG Trigger: CCCAGCCTTCCCTCCCCCGAGGCTCTTCCGCTCACAGCCACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | GCCAAGGGCTTGGGCAATCCTCCCCCACCTCCTCCTCCTCCTCTTTaGAGAGGAGCCGAGGGCTCGGGTGCGGAGTTGGGGAGCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AKGLGNPPPPPPPPL*RGAEGSGAELGSRL Trigger: AAGCCTGCTCCCCAACTCCGCACCCGAGCCCTCGGCTCCTCTCCAAAGAGGAGGAGGAGGAGGTGGGGGAGGATTGCCCAAGCCCTTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | TGGGACAGGAGCTCGCTTCGCTCTGGGTGCCTCTTGGGCAGCTTGTaGGAAGCTCCTGGGGTGGCTGTGAGCGGAAGAGCCTCGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WDRSSLRSGCLLGSL*EAPGVAVSGRASGE Trigger: CTCCCCCGAGGCTCTTCCGCTCACAGCCACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | ACTGGAGCGGCTTCGGGAGCAGAGCTGCCGACTGGCCTTACTGGGTaGGCTCTGGTAGGGGCAGTGATCAGAGCAGGGAGGGCTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGAASGAELPTGLTG*ALVGAVIRAGRADP Trigger: GGGGTCAGCCCTCCCTGCTCTGATCACTGCCCCTACCAGAGCCCACCCAGTAAGGCCAGTCGGCAGCTCTGCTCCCGAAGCCGCTCCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGCAAGGTGGACCCCGATaGGCTCCCAGGACCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TWRRTQDDPLEARTTLTWQGGPR*APRTAA Trigger: TGCTGCGGTCCTGGGAGCCAATCGGGGTCCACCTTG...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | CTCCTCCTCCTCTTTGGAGAGGAGCCGAGGGCTCGGGTGCGGAGTTaGGGAGCAGGCTTTCACTCTGGGACAGGGCAGCACCGAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLFGEEPRARVRS*GAGFHSGTGQHRSE Trigger: CTCACTTCGGTGCTGCCCTGTCCCAGAGTGAAAGCCTGCTCCCCAACTCCGCACCCGAGCCCTCGGCTCCTCTCCAAAGAGGAGGAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | GTTTCCGTTGGCAGAGGGGCACCCTGCTGGGCCAAGTCTTCAAGGTaGACCCCGATTGGCTCCCAGGACCGCAGCACCTTCCTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSVGRGAPCWAKSSR*TPIGSQDRSTFLCR Trigger: CCTGCAGAGGAAGGTGCTGCGGTCCTGGGAGCCAATCGGGGTCCACCTTGAAGACTTGGCCCAGCAGGGTGCCCCTCTGCCAACGGAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | GGGCTGTACTGGCTGGGCTCTGTCTCTGAGGTCTCCGGGCACCACTaGAGCTCCCCAAAGCACGTGGCTGAGTCAAAGTCACTGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLYWLGSVSEVSGHH*SSPKHVAESKSLAS Trigger: GGACGCCAGTGACTTTGACTCAGCCACGTGCTTTGGGGAGCTGCAGTGGTGCCCGGAGACCTCAGAGACAGAGCCCAGCCAGTACAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | GGGCGCTTCTGGCCAGCCTGTGAGACTGGTTGGGTTGTGGCATGCTaGAAATGGGACAGGAGCTCGCTTCGCTCTGGGTGCCTCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRFWPACETGWVVAC*KWDRSSLRSGCLLG Trigger: GCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAACCAGTCTCACAGGCTGGCCAGAAGCGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | ACCACACGGCCTTCACCGATGGCCTTTTCCCGCCGCTTCCTGGCATaGCGGACGCTTGGGGTTCCATCTGAACAGGGCCCTCTGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TTRPSPMAFSRRFLA*RTLGVPSEQGPLLS Trigger: TGAGAGCAGAGGGCCCTGTTCAGATGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAAAGGCCATCGGTGAAGGCCGTGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | GCCTGGGCTGAGCTTGGTGTCTGGCTTGAAGGGGTCCTCCTCCATTaGCTTGTATGGAGGTGTGGTGGGTGGCGTGAGTCCTGCCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AWAELGVWLEGVLLH*LVWRCGGWRESCRA Trigger: GGCACGGCAGGACTCACGCCACCCACCACACCTCCATACAAGCCAATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCTCAGCCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 90 bp | GGGGTCTTCTTATCCTGGGTGCCATCCACCTTGACACAAGGCCGCTaGCTTCTGGAACTGAGGCTGGTCTGGGACCAGGTGGCCCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVFLSWVPSTLTQGR*LLELRLVWDQVAPS Trigger: GGACGGGGCCACCTGGTCCCAGACCAGCCTCAGTTCCAGAAGTCAGCGGCCTTGTGTCAAGGTGGATGGCACCCAGGATAAGAAGACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 90 bp | CTTTTCCCGCCGCTTCCTGGCATGCCGGACGCTTGGGGTTCCATCTaGACAGGGCCCTCTGCTCTCACGTCTGAAGTTCTTCCGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFPPLPGMPDAWGSI*TGPSALTSEVLPGG Trigger: GCCACCCGGAAGAACTTCAGACGTGAGAGCAGAGGGCCCTGTTCAGATGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | GTTGTGGCATGCTGCAAATGGGACAGGAGCTCGCTTCGCTCTGGGTaGCTCTTGGGCAGCTTGTGGGAAGCTCCTGGGGTGGCTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVACCKWDRSSLRSG*LLGSLWEAPGVAVS Trigger: GCTCACAGCCACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | TGTATACCACACGGCCTTCACCGATGGCCTTTTCCCGCCGCTTCCTaGCATGCCGGACGCTTGGGGTTCCATCTGAACAGGGCCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CIPHGLHRWPFPAAS*HAGRLGFHLNRALC Trigger: GCAGAGGGCCCTGTTCAGATGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAAAGGCCATCGGTGAAGGCCGTGTGGTATACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 90 bp | GGGGCAGCTTCCTCTGAGGCAGGCAGTAGGTATGCATGTAGCGAATaGGCTGTACCATGGCCCTCACATCCTCCTCGGGAGGCTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GAASSEAGSRYACSE*AVPWPSHPPREAGH Trigger: GTGCCCAGCCTCCCGAGGAGGATGTGAGGGCCATGGTACAGCTCATTCGCTACATGCATACCTACTGCCTGCCTCAGAGGAAGCTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 90 bp | GGATCTGGGATCCCTGGGGGAGCTGCCGGCCTTGACTACTGTCTGTaGGGCTGCCCAGGTCTTCCTCCAGGTTGTGGGTCTCTGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSGIPGGAAGLDYCL*GCPGLPPGCGSLYP Trigger: TGGATACAGAGACCCACAACCTGGAGGAAGACCTGGGCAGCCTCACAGACAGTAGTCAAGGCCGGCAGCTCCCCCAGGGATCCCAGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | AAGGGGCGCTTCTGGCCAGCCTGTGAGACTGGTTGGGTTGTGGCATaGTGCAAATGGGACAGGAGCTCGCTTCGCTCTGGGTGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGRFWPACETGWVVA*CKWDRSSLRSGCLL Trigger: CAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAACCAGTCTCACAGGCTGGCCAGAAGCGCCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | CTGTCTCTGAGGTCTCCGGGCACCACTGCAGCTCCCCAAAGCACGTaGCTGAGTCAAAGTCACTGGCGTCCAGCTGGGAGAGGTCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLRSPGTTAAPQST*LSQSHWRPAGRGQA Trigger: AGCTTGACCTCTCCCAGCTGGACGCCAGTGACTTTGACTCAGCCACGTGCTTTGGGGAGCTGCAGTGGTGCCCGGAGACCTCAGAGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | CACTGTCAATCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTGGCTaGGCTCTGTCTCTGAGGTCTCCGGGCACCACTGCAGCTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HCQSGRARSHRGCTG*ALSLRSPGTTAAPQ Trigger: TTGGGGAGCTGCAGTGGTGCCCGGAGACCTCAGAGACAGAGCCCAGCCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGATTGACAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | GAGCTTGGTGTCTGGCTTGAAGGGGTCCTCCTCCATTGGCTTGTATaGAGGTGTGGTGGGTGGCGTGAGTCCTGCCGTGCCGCAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELGVWLEGVLLHWLV*RCGGWRESCRAAKL Trigger: GAGCTTTGCGGCACGGCAGGACTCACGCCACCCACCACACCTCCATACAAGCCAATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | TTGGGTTGTGGCATGCTGCAAATGGGACAGGAGCTCGCTTCGCTCTaGGTGCCTCTTGGGCAGCTTGTGGGAAGCTCCTGGGGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGCGMLQMGQELASL*VPLGQLVGSSWGGC Trigger: ACAGCCACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | GTCACAGTTCTGGTTTGCCTCCCTCCTAGGGGCCTTTGTTTCCGTTaGCAGAGGGGCACCCTGCTGGGCCAAGTCTTCAAGGTGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTVLVCLPPRGLCFR*QRGTLLGQVFKVDP Trigger: GGGGTCCACCTTGAAGACTTGGCCCAGCAGGGTGCCCCTCTGCCAACGGAAACAAAGGCCCCTAGGAGGGAGGCAAACCAGAACTGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | CAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGGACAGACGGCTCGGGTGCGGAGTaGGGGAGCAGGCTTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: QWNINSMETHGRTDGRTDGSGAE*GSRLSL Trigger: GAGTGAAAGCCTGCTCCCCAACTCCGCACCCGAGCC...GTCTGTCCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTGGCTCTGGGGCCCGTaGGGGCAGCTTCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSFSLLCDLSRSLARSLAWLWGP*GQLPLR Trigger: CCTCAGAGGAAGCTGCCCCAACGGGCCCCAGAGCCA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCTGCAGGCCTGGGGGATaGGCTCTGGGGCCCGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FKSFSLLCDLSRSLARSLCRPGG*ALGPVG Trigger: CCCAACGGGCCCCAGAGCCAATCCCCCAGGCCTGCA...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 90 bp | AGCACCGAAGTGAGGTGCTTATGCAGTTCCGTACAAGGCCGGCTCTaGGCCCGCAGTGTGGGGGTCTTCTTATCCTGGGTGCCATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: STEVRCLCSSVQGRL*ARSVGVFLSWVPST Trigger: GGTGGATGGCACCCAGGATAAGAAGACCCCCACACTGCGGGCTCAGAGCCGGCCTTGTACGGAACTGCATAAGCACCTCACTTCGGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 90 bp | GTGGTCTCCAAAGGAGCAGGAGAAGGGGCGCTTCTGGCCAGCCTGTaGGACTGGTTGGGTTGTGGCATGCTGCAAATGGGACAGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VVSKGAGEGALLASL*DWLGCGMLQMGQEL Trigger: GAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAACCAGTCTCACAGGCTGGCCAGAAGCGCCCCTTCTCCTGCTCCTTTGGAGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | TTCTCACTGTCAATCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTaGCTGGGCTCTGTCTCTGAGGTCTCCGGGCACCACTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSLSIWKSSESSGLY*LGSVSEVSGHHCSS Trigger: GGAGCTGCAGTGGTGCCCGGAGACCTCAGAGACAGAGCCCAGCCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGATTGACAGTGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 90 bp | TGGCCCCGTCCTTCAGAGCGTCAGAGCTTGCTGTTGGGGAGGATGTaGCCAGGAGGAGCTTCTGTAGCAGTGAAAGCTCGTCCACGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WPRPSERQSLLLGRM*PGGASVAVKARPRQ Trigger: CTGACGTGGACGAGCTTTCACTGCTACAGAAGCTCCTCCTGGCCACATCCTCCCCAACAGCAAGCTCTGACGCTCTGAAGGACGGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | TTCTGGCCAGCCTGTGAGACTGGTTGGGTTGTGGCATGCTGCAAATaGGACAGGAGCTCGCTTCGCTCTGGGTGCCTCTTGGGCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FWPACETGWVVACCK*DRSSLRSGCLLGSL Trigger: CAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAACCAGTCTCACAGGCTGGCCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | CAGTCGGGTGGGAGGGGCAGAGGACGACTGACAGCACTTGGAGGCGCACCCAGGTCCTCAAAGCTCTTCTaGCCAAGAGAGTCGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QSGGRGRGRLTALGGAPRSSKLF*PRESLC Trigger: ACAAAGCGACTCTCTTGGCAAGAAGAGCTTTGAGGA...CCTGGGTGCGCCTCCAAGTGCTGTCAGTCGTCCTCTGCCCCTCCCACCCGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGGCTCGGGTGCGGAGTaGGGGAGCAGGCTTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: FKSFSLLCDLSRSLARSLGSGAE*GSRLSL Trigger: GAGTGAAAGCCTGCTCCCCAACTCCGCACCCGAGCC...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTGGCCTGGGCTGAGCTaGGTGTCTGGCTTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSFSLLCDLSRSLARSLAWPGLS*VSGLKG Trigger: CCCCTTCAAGCCAGACACCAAGCTCAGCCCAGGCCA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 90 bp | CTGTATCCAGGCACATCGAGGGCAGAGCACCTAAGGGCTCATCAGTaGATGTCAGCCAGGGACCCAGCTCTGGATTCAGTCTCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYPGTSRAEHLRAHQ*MSARDPALDSVSWS Trigger: GCTCCAGGAGACTGAATCCAGAGCTGGGTCCCTGGCTGACATTCACTGATGAGCCCTTAGGTGCTCTGCCCTCGATGTGCCTGGATACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | AGCTCCCCAAAGCACGTGGCTGAGTCAAAGTCACTGGCGTCCAGCTaGGAGAGGTCAAGCTCTGGCAAGTCAGCACACAGCTGTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPKHVAESKSLASS*ERSSSGKSAHSCSS Trigger: AGAGGAACAGCTGTGTGCTGACTTGCCAGAGCTTGACCTCTCCCAGCTGGACGCCAGTGACTTTGACTCAGCCACGTGCTTTGGGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | ACTTGGAGGCGCACCCAGGACGATCCGCTGGAAGCGAGGACGACGCTAACGTGGATCTTCCTCCCGCTTTaGCCTTGTAGGCTTGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: TWRRTQDDPLEARTTLTWIFLPL*PCRLVN Trigger: GTTAACAAGCCTACAAGGCAAAAGCGGGAGGAAGAT...CCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTCCTGGGTGCGCCTCCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCTGCCTCTTGGGCAGCTaGTGGGAAGCTCCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FKSFSLLCDLSRSLARSLCLLGS*WEAPGV Trigger: CACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCA...GAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 90 bp | CAAAGCTCTTCTTGCCAAGAGAGTCGCTTTGTGACAAGGCCAGCATaGGGCACCTGGAGGAGTCTCTGGAAGTGGGCTGTGGGCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSSSCQESRFVTRPA*GTWRSLWKWAVGSL Trigger: CAAGCTGCCCACAGCCCACTTCCAGAGACTCCTCCAGGTGCCTCATGCTGGCCTTGTCACAAAGCGACTCTCTTGGCAAGAAGAGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | CCTCCTCCTCCTCAAGCAGGAAGCTACTCTCGCCACTGCTGCTGCTaGTGTCCTCAAATACGGTGTCATACTCCGGGCTTTTACAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: PPPPQAGSYSRHCCC*CPQIRCHTPGFYRT Trigger: CGTCCTGTAAAAGCCCGGAGTATGACACCGTATTTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTAGCTTCCTGCTTGAGGAGGAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | TGGTCTCTTAGCTGCATGCTGTCCTTGTGGGTAGGGTCACAGTTCTaGTTTGCCTCCCTCCTAGGGGCCTTTGTTTCCGTTGGCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WSLSCMLSLWVGSQF*FASLLGAFVSVGRG Trigger: CCCTCTGCCAACGGAAACAAAGGCCCCTAGGAGGGAGGCAAACCAGAACTGTGACCCTACCCACAAGGACAGCATGCAGCTAAGAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | ATGAGGGAAGGGACTCCTCAGATGTGGGATCATAGTCAGTGTATCTaGGCCAACGGAAGTGCCGGAGCCCTCCATAGCTCAGGTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MREGTPQMWDHSQCI*ANGSAGALHSSGGR Trigger: CCTTCCACCTGAGCTATGGAGGGCTCCGGCACTTCCGTTGGCCCAGATACACTGACTATGATCCCACATCTGAGGAGTCCCTTCCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | CAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGGACAGACATCTTCCTCCCTAGTTaGGTCCATGGCAGGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: QWNINSMETHGRTDGRTDIFLPS*VHGRPR Trigger: TCGTGGCCTGCCATGGACCAAACTAGGGAGGAAGAT...GTCTGTCCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | CAGTGGAACATCAACAGCATGGAAACTCACGGACGGACGGACGGACGGACAGACTGGGCTGTGGGCAGCTaGGATCTTCATCTGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QWNINSMETHGRTDGRTDWAVGS*DLHLCL Trigger: GAGACACAGATGAAGATCCAAGCTGCCCACAGCCCA...GTCTGTCCGTCCGTCCGTCCGTCCGTGAGTTTCCATGCTGTTGATGTTCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | GACGCCAGGTCTTCACCTTCCAGAGCAGTCTCCAGCAGCCCAAAGTaGTTTGTGAGACTGGCACGGATCTCATGGTCTCTTAGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DARSSPSRAVSSSPK*FVRLARISWSLSCM Trigger: CATGCAGCTAAGAGACCATGAGATCCGTGCCAGTCTCACAAAGCACTTTGGGCTGCTGGAGACTGCTCTGGAAGGTGAAGACCTGGCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | CTTCCTCCTCCTCCTCAAGCAGGAAGCTACTCTCGCCACTGCTGCTaGTGCTGTCCTCAAATACGGTGTCATACTCCGGGCTTTTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPPPQAGSYSRHCC*CCPQIRCHTPGFYR Trigger: CCTGTAAAAGCCCGGAGTATGACACCGTATTTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTAGCTTCCTGCTTGAGGAGGAGGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | CCTCTTCCTCCTCCTCCTCAAGCAGGAAGCTACTCTCGCCACTGCTaGTGCTGCTGTCCTCAAATACGGTGTCATACTCCGGGCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLPPPPQAGSYSRHC*CCCPQIRCHTPGFY Trigger: GTAAAAGCCCGGAGTATGACACCGTATTTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTAGCTTCCTGCTTGAGGAGGAGGAGGAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTAGGTCTTCCTCCAGGTaGTGGGTCTCTGTATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSFSLLCDLSRSLARSLARSSSR*WVSVSR Trigger: CCTGGATACAGAGACCCACAACCTGGAGGAAGACCT...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTCTCTCTCCTGTGTGATCTCTCACGCTCACTCGCTCGCTCGCTCGCTTCCTCCTCCATTGGCTaGTATGGAGGTGTGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSFSLLCDLSRSLARSLASSSIG*YGGVVG Trigger: ACCCACCACACCTCCATACAAGCCAATGGAGGAGGA...AGCGAGCGAGCGAGCGAGTGAGCGTGAGAGATCACACAGGAGAGAGAAAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | GCTGGAAGCGAGGACGACGCTAACGTGGCAGTGGAACATCAACAGCATGGAAACAGCTTGGTGTCTGGCTaGAAGGGGTCCTCCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: AGSEDDANVAVEHQQHGNSLVSG*KGSSSI Trigger: AATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCT...GTTTCCATGCTGTTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACTGCCTCTTGGGCAGCTaGTGGGAAGCTCCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSLARSLSFSYTLFFENCLLGS*WEAPGV Trigger: CACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCA...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 90 bp | GTCTCCAGCAGCCCAAAGTGCTTTGTGAGACTGGCACGGATCTCATaGTCTCTTAGCTGCATGCTGTCCTTGTGGGTAGGGTCACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSSSPKCFVRLARIS*SLSCMLSLWVGSQF Trigger: GAACTGTGACCCTACCCACAAGGACAGCATGCAGCTAAGAGACCATGAGATCCGTGCCAGTCTCACAAAGCACTTTGGGCTGCTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 90 bp | CCAAAGTGCTTTGTGAGACTGGCACGGATCTCATGGTCTCTTAGCTaGATGCTGTCCTTGTGGGTAGGGTCACAGTTCTGGTTTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PKCFVRLARISWSLS*MLSLWVGSQFWFAS Trigger: GGAGGCAAACCAGAACTGTGACCCTACCCACAAGGACAGCATGCAGCTAAGAGACCATGAGATCCGTGCCAGTCTCACAAAGCACTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATCGCTCTGGGTGCCTCTaGGGCAGCTTGTGGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGRALSEVLRYSSKVKADRSGCL*GSLWEA Trigger: AGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCG...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 90 bp | AGGGCAGCGTGCTCTGAACACCGGAAGGTGATAAAACCGTGCTTCTaGCCTCTTTTACTTCTCGTCAGCACCTGGCACTCTACAATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAACSEHRKVIKPCF*PLLLLVSTWHSTIS Trigger: TGAGATTGTAGAGTGCCAGGTGCTGACGAGAAGTAAAAGAGGCCAGAAGCACGGTTTTATCACCTTCCGGTGTTCAGAGCACGCTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACTCCTCCTCCATTGGCTaGTATGGAGGTGTGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ARSLARSLSFSYTLFFENSSSIG*YGGVVG Trigger: ACCCACCACACCTCCATACAAGCCAATGGAGGAGGA...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGCAAGGTGGACCCCGATaGGCTCCCAGGACCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KRKHIGRALSEVLRYSSKQGGPR*APRTAA Trigger: TGCTGCGGTCCTGGGAGCCAATCGGGGTCCACCTTG...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS GCA 90 bp | TCTTCTTCTTCTTCCTCCTCCTCCTCCTCATCTTCCTCCCGCTTTTaGCTTGTAGGCTTGTTAACATCCCGTTTCACCTCCAGCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSSSSSSSSRF*LVGLLTSRFTSSLR Trigger: TCTGAGGCTGGAGGTGAAACGGGATGTTAACAAGCCTACAAGGCAAAAGCGGGAGGAAGATGAGGAGGAGGAGGAGGAAGAAGAAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 90 bp | CGAACACCTCAAAGCGCTTCTTTAGTTCCCGAGAGCTCATGTCACTaGAGAGATTTCGAATGTATACCACACGGCCTTCACCGATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTPQSASLVPESSCH*RDFECIPHGLHRWP Trigger: AGGCCATCGGTGAAGGCCGTGTGGTATACATTCGAAATCTCTCCAGTGACATGAGCTCTCGGGAACTAAAGAAGCGCTTTGAGGTGTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGTGGCCTGGGCTGAGCTaGGTGTCTGGCTTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KRKHIGRALSEVLRYSSKWPGLS*VSGLKG Trigger: CCCCTTCAAGCCAGACACCAAGCTCAGCCCAGGCCA...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGCGCTCTGGGTGCCTCTaGGGCAGCTTGTGGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KHIGRALSEVLRYSSKVKRSGCL*GSLWEA Trigger: AGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCG...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATAGGTCTTCCTCCAGGTaGTGGGTCTCTGTATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IGRALSEVLRYSSKVKADRSSSR*WVSVSR Trigger: CCTGGATACAGAGACCCACAACCTGGAGGAAGACCT...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATTGGGCTGTGGGCAGCTaGGATCTTCATCTGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IGRALSEVLRYSSKVKADWAVGS*DLHLCL Trigger: GAGACACAGATGAAGATCCAAGCTGCCCACAGCCCA...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | ATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGGCTGATAGCTTGGTGTCTGGCTaGAAGGGGTCCTCCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: IGRALSEVLRYSSKVKADSLVSG*KGSSSI Trigger: AATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCT...ATCAGCCTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGTGGAAGGAGGGCTCATaGCGCTTTCTCAGGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KHIGRALSEVLRYSSKVKWKEGS*RFLRVA Trigger: CGCCACCCTGAGAAAGCGCAATGAGCCCTCCTTCCA...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | GCTCGCTCGCTCGCTCGCTCGCTCTCCTTCTCATATACTCTTTTCTTTGAAAACTCCTCAAAGCTCTTCTaGCCAAGAGAGTCGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ARSLARSLSFSYTLFFENSSKLF*PRESLC Trigger: ACAAAGCGACTCTCTTGGCAAGAAGAGCTTTGAGGA...GTTTTCAAAGAAAAGAGTATATGAGAAGGAGAGCGAGCGAGCGAGCGAGCGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGATCTTCCTCCCTAGTTaGGTCCATGGCAGGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: KRKHIGRALSEVLRYSSKIFLPS*VHGRPR Trigger: TCGTGGCCTGCCATGGACCAAACTAGGGAGGAAGAT...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | AAACGTAAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGAGCTGCATGCTGTCCTaGTGGGTAGGGTCACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRKHIGRALSEVLRYSSKSCMLS*WVGSQF Trigger: GAACTGTGACCCTACCCACAAGGACAGCATGCAGCT...CTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTTACGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS-3UTR CAA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGAGCTGCATGCTGTCCTaGTGGGTAGGGTCACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KHIGRALSEVLRYSSKVKSCMLS*WVGSQF Trigger: GAACTGTGACCCTACCCACAAGGACAGCATGCAGCT...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGTCCATGGCTTCGTACTaGCTTTTCCCAGATGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KHIGRALSEVLRYSSKVKSMASY*LFPDEG Trigger: TCCCTCATCTGGGAAAAGCAAGTACGAAGCCATGGA...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | AGACAGAAGATGTTATGTGAACACAGCTCAAGTCTAACAGAAGGAAGTCAGTCGTCCATGGCTTCGTACTaGCTTTTCCCAGATGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RQKMLCEHSSSLTEGSQSSMASY*LFPDEG Trigger: TCCCTCATCTGGGAAAAGCAAGTACGAAGCCATGGA...CGACTGACTTCCTTCTGTTAGACTTGAGCTGTGTTCACATAACATCTTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS-3UTR CAA 90 bp | AAACATATTGGAAGGGCCTTGTCTGAGGTATTGAGGTATTCCTCGAAGGTTAAGATCTTCCTCCCGCTTTaGCCTTGTAGGCTTGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: KHIGRALSEVLRYSSKVKIFLPL*PCRLVN Trigger: GTTAACAAGCCTACAAGGCAAAAGCGGGAGGAAGAT...CTTAACCTTCGAGGAATACCTCAATACCTCAGACAAGGCCCTTCCAATATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | TCACATCCTCCTCGGGAGGCTGGGCACTGTCGGGGCTaGCCGTGTCCTGTGCTAGGGAGTCTTGGGGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHPPREAGHCRG*PCPVLGSLGAR Trigger: CCTCGCCCCAAGACTCCCTAGCACAGGACACGGCCAGCCCCGACAGTGCCCAGCCTCCCGAGGAGGATGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | CTCTGGGTGCCTCTTGGGCAGCTTGTGGGAAGCTCCTaGGGTGGCTGTGAGCGGAAGAGCCTCGGGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LWVPLGQLVGSS*GGCERKSLGGG Trigger: CCCTCCCCCGAGGCTCTTCCGCTCACAGCCACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 90 bp | GCAGAGGGGCACCCTGCTGGGCCAAGTCTTCAAGGTGGACCCCGATaGGCTCCCAGGACCGCAGCACCTTCCTCTGCAGGGCAGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEGHPAGPSLQGGPR*APRTAAPSSAGQPL Trigger: CAGAGGCTGCCCTGCAGAGGAAGGTGCTGCGGTCCTGGGAGCCAATCGGGGTCCACCTTGAAGACTTGGCCCAGCAGGGTGCCCCTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | GCGGGGATCTGGGATCCCTGGGGGAGCTGCCGGCCTTaGCTACTGTCTGTGAGGCTGCCCAGGTCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGIWDPWGSCRP*LLSVRLPRSSS Trigger: GGAGGAAGACCTGGGCAGCCTCACAGACAGTAGTCAAGGCCGGCAGCTCCCCCAGGGATCCCAGATCCCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | TCTTGGGCAGCTTGTGGGAAGCTCCTGGGGTGGCTGTaGGCGGAAGAGCCTCGGGGGAGGGAAGGCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SWAACGKLLGWL*AEEPRGREGWE Trigger: CTCCCAGCCTTCCCTCCCCCGAGGCTCTTCCGCTCACAGCCACCCCAGGAGCTTCCCACAAGCTGCCCAAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | TTGGGCAATCCTCCCCCACCTCCTCCTCCTCCTCTTTaGAGAGGAGCCGAGGGCTCGGGTGCGGAGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGNPPPPPPPPL*RGAEGSGAELG Trigger: CCCCAACTCCGCACCCGAGCCCTCGGCTCCTCTCCAAAGAGGAGGAGGAGGAGGTGGGGGAGGATTGCCCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | GGCAGAGGGGCACCCTGCTGGGCCAAGTCTTCAAGGTaGACCCCGATTGGCTCCCAGGACCGCAGCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GRGAPCWAKSSR*TPIGSQDRSTF Trigger: GAAGGTGCTGCGGTCCTGGGAGCCAATCGGGGTCCACCTTGAAGACTTGGCCCAGCAGGGTGCCCCTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 72 bp | GGCGGGGATCTGGGATCCCTGGGGGAGCTGCCGGCCTaGACTACTGTCTGTGAGGCTGCCCAGGTCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGDLGSLGELPA*TTVCEAAQVFL Trigger: GAGGAAGACCTGGGCAGCCTCACAGACAGTAGTCAAGGCCGGCAGCTCCCCCAGGGATCCCAGATCCCCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | ACCCTGCTGGGCCAAGTCTTCAAGGTGGACCCCGATTaGCTCCCAGGACCGCAGCACCTTCCTCTGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TLLGQVFKVDPD*LPGPQHLPLQG Trigger: GCCCTGCAGAGGAAGGTGCTGCGGTCCTGGGAGCCAATCGGGGTCCACCTTGAAGACTTGGCCCAGCAGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 72 bp | CCTCTTTGGAGAGGAGCCGAGGGCTCGGGTGCGGAGTaGGGGAGCAGGCTTTCACTCTGGGACAGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLWRGAEGSGAE*GSRLSLWDRAA Trigger: TGCTGCCCTGTCCCAGAGTGAAAGCCTGCTCCCCAACTCCGCACCCGAGCCCTCGGCTCCTCTCCAAAGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 72 bp | CACCCTGCTGGGCCAAGTCTTCAAGGTGGACCCCGATaGGCTCCCAGGACCGCAGCACCTTCCTCTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HPAGPSLQGGPR*APRTAAPSSAG Trigger: CCCTGCAGAGGAAGGTGCTGCGGTCCTGGGAGCCAATCGGGGTCCACCTTGAAGACTTGGCCCAGCAGGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 90 bp | CCTGTGCTAGGGAGTCTTGGGGCGAGGCTGGAGTCGGCCAAGGGCTaGGGCAATCCTCCCCCACCTCCTCCTCCTCCTCTTTGGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVLGSLGARLESAKG*GNPPPPPPPPLWRG Trigger: TCCTCTCCAAAGAGGAGGAGGAGGAGGTGGGGGAGGATTGCCCAAGCCCTTGGCCGACTCCAGCCTCGCCCCAAGACTCCCTAGCACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 90 bp | AAATGGGACAGGAGCTCGCTTCGCTCTGGGTGCCTCTTGGGCAGCTaGTGGGAAGCTCCTGGGGTGGCTGTGAGCGGAAGAGCCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KWDRSSLRSGCLLGS*WEAPGVAVSGRASG Trigger: CCCCGAGGCTCTTCCGCTCACAGCCACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 72 bp | GGAGTCATCGGGGCTGTACTGGCTGGGCTCTGTCTCTaGGGTCTCCGGGCACCACTGCAGCTCCCCAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GVIGAVLAGLCL*GLRAPLQLPKA Trigger: TGCTTTGGGGAGCTGCAGTGGTGCCCGGAGACCTCAGAGACAGAGCCCAGCCAGTACAGCCCCGATGACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 72 bp | CCTTCACCGATGGCCTTTTCCCGCCGCTTCCTGGCATaGCGGACGCTTGGGGTTCCATCTGAACAGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPMAFSRRFLA*RTLGVPSEQGP Trigger: AGGGCCCTGTTCAGATGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAAAGGCCATCGGTGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 72 bp | GGGCTCATCAGTGAATGTCAGCCAGGGACCCAGCTCTaGATTCAGTCTCCTGGAGCGCCGCACGGGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GLISECQPGTQL*IQSPGAPHGAH Trigger: GTGTGCCCCGTGCGGCGCTCCAGGAGACTGAATCCAGAGCTGGGTCCCTGGCTGACATTCACTGATGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CCA 72 bp | CACGGCCTTCACCGATGGCCTTTTCCCGCCGCTTCCTaGCATGCCGGACGCTTGGGGTTCCATCTGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: HGLHRWPFPAAS*HAGRLGFHLNR Trigger: CCTGTTCAGATGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAAAGGCCATCGGTGAAGGCCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CAA 72 bp | AGGAGCTCGCTTCGCTCTGGGTGCCTCTTGGGCAGCTaGTGGGAAGCTCCTGGGGTGGCTGTGAGCGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSSLRSGCLLGS*WEAPGVAVSGR Trigger: TCTTCCGCTCACAGCCACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CAA 72 bp | TGGCCTTTTCCCGCCGCTTCCTGGCATGCCGGACGCTaGGGGTTCCATCTGAACAGGGCCCTCTGCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WPFPAASWHAGR*GFHLNRALCSH Trigger: GTGAGAGCAGAGGGCCCTGTTCAGATGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGGCGGGAAAAGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CAA 90 bp | ACCTCCAGCCTCAGAGGACGCAGGCTGGGTCTAGGCCCGGTGCTCTaGGGGGAAGCAGTGATTCTCACCTCTTCTGCCATGGCAGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSLRGRRLGLGPVL*GEAVILTSSAMAEW Trigger: CCACTCTGCCATGGCAGAAGAGGTGAGAATCACTGCTTCCCCCAAGAGCACCGGGCCTAGACCCAGCCTGCGTCCTCTGAGGCTGGAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS CAA 90 bp | GGGCTGAGCTTGGTGTCTGGCTTGAAGGGGTCCTCCTCCATTGGCTaGTATGGAGGTGTGGTGGGTGGCGTGAGTCCTGCCGTGCCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLSLVSGLKGSSSIG*YGGVVGGVSPAVPQ Trigger: TTGCGGCACGGCAGGACTCACGCCACCCACCACACCTCCATACAAGCCAATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCTCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS TCA 72 bp | ATCCCTGGGGGAGCTGCCGGCCTTGACTACTGTCTGTaGGGCTGCCCAGGTCTTCCTCCAGGTTGTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: IPGGAAGLDYCL*GCPGLPPGCGS Trigger: AGACCCACAACCTGGAGGAAGACCTGGGCAGCCTCACAGACAGTAGTCAAGGCCGGCAGCTCCCCCAGGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
||
| CDS GCA 72 bp | TGCTGCAAATGGGACAGGAGCTCGCTTCGCTCTGGGTaGCTCTTGGGCAGCTTGTGGGAAGCTCCTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CCKWDRSSLRSG*LLGSLWEAPGV Trigger: CACCCCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | AGGTCTCCGGGCACCACTGCAGCTCCCCAAAGCACGTaGCTGAGTCAAAGTCACTGGCGTCCAGCTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RSPGTTAAPQST*LSQSHWRPAGR Trigger: TCTCCCAGCTGGACGCCAGTGACTTTGACTCAGCCACGTGCTTTGGGGAGCTGCAGTGGTGCCCGGAGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | TCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTGGCTaGGCTCTGTCTCTGAGGTCTCCGGGCACCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: SGRARSHRGCTG*ALSLRSPGTTA Trigger: TGCAGTGGTGCCCGGAGACCTCAGAGACAGAGCCCAGCCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | GTCTGGCTTGAAGGGGTCCTCCTCCATTGGCTTGTATaGAGGTGTGGTGGGTGGCGTGAGTCCTGCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VWLEGVLLHWLV*RCGGWRESCRA Trigger: GGCACGGCAGGACTCACGCCACCCACCACACCTCCATACAAGCCAATGGAGGAGGACCCCTTCAAGCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | GGCATGCTGCAAATGGGACAGGAGCTCGCTTCGCTCTaGGTGCCTCTTGGGCAGCTTGTGGGAAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GMLQMGQELASL*VPLGQLVGSSW Trigger: CCAGGAGCTTCCCACAAGCTGCCCAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 90 bp | TCGGGGGAGGGAAGGCTGGGAGCTGTGTCTTGGCCTGGGCTGAGCTaGGTGTCTGGCTTGAAGGGGTCCTCCTCCATTGGCTTGTATGGA | + |
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Preference number: 6 (lower is better) Translates to: SGEGRLGAVSWPGLS*VSGLKGSSSIGLYG Trigger: TCCATACAAGCCAATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCTCAGCCCAGGCCAAGACACAGCTCCCAGCCTTCCCTCCCCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 90 bp | AGCAGGAGAAGGGGCGCTTCTGGCCAGCCTGTGAGACTGGTTGGGTaGTGGCATGCTGCAAATGGGACAGGAGCTCGCTTCGCTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SRRRGASGQPVRLVG*WHAANGTGARFALG Trigger: ACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAACCAGTCTCACAGGCTGGCCAGAAGCGCCCCTTCTCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS GCA 72 bp | TGGCCAGCCTGTGAGACTGGTTGGGTTGTGGCATGCTaGAAATGGGACAGGAGCTCGCTTCGCTCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: WPACETGWVVAC*KWDRSSLRSGC Trigger: GCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAACCAGTCTCACAGGCTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | TCAATCTGGAAGAGCTCGGAGTCATCGGGGCTGTACTaGCTGGGCTCTGTCTCTGAGGTCTCCGGGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: SIWKSSESSGLY*LGSVSEVSGHH Trigger: GTGGTGCCCGGAGACCTCAGAGACAGAGCCCAGCCAGTACAGCCCCGATGACTCCGAGCTCTTCCAGATTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | TCGTGGTCTCCAAAGGAGCAGGAGAAGGGGCGCTTCTaGCCAGCCTGTGAGACTGGTTGGGTTGTGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: SWSPKEQEKGRF*PACETGWVVAC Trigger: GCATGCCACAACCCAACCAGTCTCACAGGCTGGCCAGAAGCGCCCCTTCTCCTGCTCCTTTGGAGACCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | CTGGTTTGCCTCCCTCCTAGGGGCCTTTGTTTCCGTTaGCAGAGGGGCACCCTGCTGGGCCAAGTCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LVCLPPRGLCFR*QRGTLLGQVFK Trigger: CTTGAAGACTTGGCCCAGCAGGGTGCCCCTCTGCCAACGGAAACAAAGGCCCCTAGGAGGGAGGCAAACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 72 bp | ACGGGGCACACGGAGCTGTCCATCTTCCTCCCTAGTTaGGTCCATGGCAGGCCACGACCTGGTCTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: TGHTELSIFLPS*VHGRPRPGLFL Trigger: CAGGAAGAGACCAGGTCGTGGCCTGCCATGGACCAAACTAGGGAGGAAGATGGACAGCTCCGTGTGCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 72 bp | AGGGGCGCTTCTGGCCAGCCTGTGAGACTGGTTGGGTaGTGGCATGCTGCAAATGGGACAGGAGCTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RGASGQPVRLVG*WHAANGTGARF Trigger: GAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAACCAGTCTCACAGGCTGGCCAGAAGCGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | GTGAGGTGCTTATGCAGTTCCGTACAAGGCCGGCTCTaGGCCCGCAGTGTGGGGGTCTTCTTATCCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VRCLCSSVQGRL*ARSVGVFLSWV Trigger: CACCCAGGATAAGAAGACCCCCACACTGCGGGCTCAGAGCCGGCCTTGTACGGAACTGCATAAGCACCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | CCGCTTCCTGGCATGCCGGACGCTTGGGGTTCCATCTaGACAGGGCCCTCTGCTCTCACGTCTGAAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLPGMPDAWGSI*TGPSALTSEVL Trigger: AAGAACTTCAGACGTGAGAGCAGAGGGCCCTGTTCAGATGGAACCCCAAGCGTCCGGCATGCCAGGAAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | GCAGCTCCCCAAAGCACGTGGCTGAGTCAAAGTCACTaGCGTCCAGCTGGGAGAGGTCAAGCTCTGGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: AAPQSTWLSQSH*RPAGRGQALAS Trigger: ACTTGCCAGAGCTTGACCTCTCCCAGCTGGACGCCAGTGACTTTGACTCAGCCACGTGCTTTGGGGAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | CTGTCTGTGAGGCTGCCCAGGTCTTCCTCCAGGTTGTaGGTCTCTGTATCCAGGCACATCGAGGGCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSVRLPRSSSRL*VSVSRHIEGRA Trigger: TGCTCTGCCCTCGATGTGCCTGGATACAGAGACCCACAACCTGGAGGAAGACCTGGGCAGCCTCACAGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | CATGAGGCACCTGGAGGAGTCTCTGGAAGTGGGCTGTaGGCAGCTTGGATCTTCATCTGTGTCTCCGCACCC | + |
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Preference number: 6 (lower is better) Translates to: HEAPGGVSGSGL*AAWIFICVSAP Trigger: GGGTGCGGAGACACAGATGAAGATCCAAGCTGCCCACAGCCCACTTCCAGAGACTCCTCCAGGTGCCTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | GAGCTTGGTGTCTGGCTTGAAGGGGTCCTCCTCCATTaGCTTGTATGGAGGTGTGGTGGGTGGCGTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: ELGVWLEGVLLH*LVWRCGGWRES Trigger: GGACTCACGCCACCCACCACACCTCCATACAAGCCAATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | GGGAGCTGTGTCTTGGCCTGGGCTGAGCTTGGTGTCTaGCTTGAAGGGGTCCTCCTCCATTGGCTTGTATGG | + |
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Preference number: 6 (lower is better) Translates to: GSCVLAWAELGV*LEGVLLHWLVW Trigger: CCATACAAGCCAATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCTCAGCCCAGGCCAAGACACAGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | GCCTGTGAGACTGGTTGGGTTGTGGCATGCTGCAAATaGGACAGGAGCTCGCTTCGCTCTGGGTGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ACETGWVVACCK*DRSSLRSGCLL Trigger: CAAGAGGCACCCAGAGCGAAGCGAGCTCCTGTCCCATTTGCAGCATGCCACAACCCAACCAGTCTCACAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | TTATCCTGGGTGCCATCCACCTTGACACAAGGCCGCTaGCTTCTGGAACTGAGGCTGGTCTGGGACCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LSWVPSTLTQGR*LLELRLVWDQV Trigger: CACCTGGTCCCAGACCAGCCTCAGTTCCAGAAGTCAGCGGCCTTGTGTCAAGGTGGATGGCACCCAGGATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | AGAGATTTCGAATGTATACCACACGGCCTTCACCGATaGCCTTTTCCCGCCGCTTCCTGGCATGCCGGACGC | + |
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Preference number: 6 (lower is better) Translates to: RDFECIPHGLHR*PFPAASWHAGR Trigger: GCGTCCGGCATGCCAGGAAGCGGCGGGAAAAGGCCATCGGTGAAGGCCGTGTGGTATACATTCGAAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 72 bp | CTACTGTCTGTGAGGCTGCCCAGGTCTTCCTCCAGGTaGTGGGTCTCTGTATCCAGGCACATCGAGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLSVRLPRSSSR*WVSVSRHIEGR Trigger: TCTGCCCTCGATGTGCCTGGATACAGAGACCCACAACCTGGAGGAAGACCTGGGCAGCCTCACAGACAGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CAA 72 bp | GCTGTGTCTTGGCCTGGGCTGAGCTTGGTGTCTGGCTaGAAGGGGTCCTCCTCCATTGGCTTGTATGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: AVSWPGLSLVSG*KGSSSIGLYGG Trigger: ACCTCCATACAAGCCAATGGAGGAGGACCCCTTCAAGCCAGACACCAAGCTCAGCCCAGGCCAAGACACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | TCCTCTGAGGCAGGCAGTAGGTATGCATGTAGCGAATaGGCTGTACCATGGCCCTCACATCCTCCTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSEAGSRYACSE*AVPWPSHPPRE Trigger: CTCCCGAGGAGGATGTGAGGGCCATGGTACAGCTCATTCGCTACATGCATACCTACTGCCTGCCTCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | TCTTGCCAAGAGAGTCGCTTTGTGACAAGGCCAGCATaGGGCACCTGGAGGAGTCTCTGGAAGTGGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SCQESRFVTRPA*GTWRSLWKWAV Trigger: CACAGCCCACTTCCAGAGACTCCTCCAGGTGCCTCATGCTGGCCTTGTCACAAAGCGACTCTCTTGGCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | CTCCAGAGTCCCCACCCTGCGTGTCAGAGAGATAGTTaGGGAAGAAGGACGAGAGCTCTTCATCCAGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LQSPHPACQRDS*GRRTRALHPAA Trigger: CGCTGCTGGATGAAGAGCTCTCGTCCTTCTTCCTCAACTATCTCTCTGACACGCAGGGTGGGGACTCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075299.13 |
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| CDS CCA 72 bp | GGGACTCCTCAGATGTGGGATCATAGTCAGTGTATCTaGGCCAACGGAAGTGCCGGAGCCCTCCATAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GTPQMWDHSQCI*ANGSAGALHSS Trigger: TGAGCTATGGAGGGCTCCGGCACTTCCGTTGGCCCAGATACACTGACTATGATCCCACATCTGAGGAGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS GCA 72 bp | CCTCAAGCAGGAAGCTACTCTCGCCACTGCTGCTGCTaGTGTCCTCAAATACGGTGTCATACTCCGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PQAGSYSRHCCC*CPQIRCHTPGF Trigger: AAAGCCCGGAGTATGACACCGTATTTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTAGCTTCCTGCTTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS GCA 72 bp | CCTCCTCCTCCTCAAGCAGGAAGCTACTCTCGCCACTaGTGCTGCTGCTGTCCTCAAATACGGTGTCATACT | + |
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Preference number: 6 (lower is better) Translates to: PPPPQAGSYSRH*CCCCPQIRCHT Trigger: AGTATGACACCGTATTTGAGGACAGCAGCAGCAGCAGTGGCGAGAGTAGCTTCCTGCTTGAGGAGGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS TCA 72 bp | CTTCCAGAGCAGTCTCCAGCAGCCCAAAGTGCTTTGTaGGACTGGCACGGATCTCATGGTCTCTTAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LPEQSPAAQSAL*DWHGSHGLLAA Trigger: TGCAGCTAAGAGACCATGAGATCCGTGCCAGTCTCACAAAGCACTTTGGGCTGCTGGAGACTGCTCTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS GCA 72 bp | GCAGCGTGCTCTGAACACCGGAAGGTGATAAAACCGTaGTTCTGGCCTCTTTTACTTCTCGTCAGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: AACSEHRKVIKP*FWPLLLLVSTW Trigger: CCAGGTGCTGACGAGAAGTAAAAGAGGCCAGAAGCACGGTTTTATCACCTTCCGGTGTTCAGAGCACGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | AGCCCAAAGTGCTTTGTGAGACTGGCACGGATCTCATaGTCTCTTAGCTGCATGCTGTCCTTGTGGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPKCFVRLARIS*SLSCMLSLWVG Trigger: CCCTACCCACAAGGACAGCATGCAGCTAAGAGACCATGAGATCCGTGCCAGTCTCACAAAGCACTTTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | CCGTGCTTCTGGCCTCTTTTACTTCTCGTCAGCACCTaGCACTCTACAATCTCACCGAACACCTCAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PCFWPLLLLVST*HSTISPNTSKR Trigger: GCGCTTTGAGGTGTTCGGTGAGATTGTAGAGTGCCAGGTGCTGACGAGAAGTAAAAGAGGCCAGAAGCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS GCA 72 bp | TTTGTGAGACTGGCACGGATCTCATGGTCTCTTAGCTaGATGCTGTCCTTGTGGGTAGGGTCACAGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: FVRLARISWSLS*MLSLWVGSQFW Trigger: CCAGAACTGTGACCCTACCCACAAGGACAGCATGCAGCTAAGAGACCATGAGATCCGTGCCAGTCTCACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS GCA 72 bp | TCTTCACCTTCCAGAGCAGTCTCCAGCAGCCCAAAGTaGTTTGTGAGACTGGCACGGATCTCATGGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSPSRAVSSSPK*FVRLARISWSL Trigger: AAGAGACCATGAGATCCGTGCCAGTCTCACAAAGCACTTTGGGCTGCTGGAGACTGCTCTGGAAGGTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | TGCTTTTCCCAGATGAGGGAAGGGACTCCTCAGATGTaGGATCATAGTCAGTGTATCTGGGCCAACGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: CFSQMREGTPQM*DHSQCIWANGS Trigger: ACTTCCGTTGGCCCAGATACACTGACTATGATCCCACATCTGAGGAGTCCCTTCCCTCATCTGGGAAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS CCA 72 bp | CAAAGCGCTTCTTTAGTTCCCGAGAGCTCATGTCACTaGAGAGATTTCGAATGTATACCACACGGCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QSASLVPESSCH*RDFECIPHGLH Trigger: GTGAAGGCCGTGTGGTATACATTCGAAATCTCTCCAGTGACATGAGCTCTCGGGAACTAAAGAAGCGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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| CDS GCA 72 bp | CTTTCAGTAAGCTGTCAAAATCCATGGCTTCGTACTTaGTTTTCCCAGATGAGGGAAGGGACTCCTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: LSVSCQNPWLRT*FSQMREGTPQM Trigger: CATCTGAGGAGTCCCTTCCCTCATCTGGGAAAAGCAAGTACGAAGCCATGGATTTTGACAGCTTACTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063307.6 ENSMUST00000075299.13 |
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