Pregenerated sensors for PPARG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000440Ensembl transcript IDs: ENSMUST00000000450.5, ENSMUST00000171644.8, ENSMUST00000203732.3, ENSMUST00000204305.3, ENSMUST00000205213.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGCTCGCAGATCAGCAGACTCTGGGTTCAGCTGGTCGATATCACTaGAGATCTCCGCCAACAGCTTCTCCTTCTCGGCCTGTGGCATCC | + |
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Preference number: 5 (lower is better) Translates to: GLADQQTLGSAGRYH*RSPPTASPSRPVAS Trigger: GGATGCCACAGGCCGAGAAGGAGAAGCTGTTGGCGGAGATCTCCAGTGATATCGACCAGCTGAACCCAGAGTCTGCTGATCTGCGAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000205213.3 |
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| CDS TCA 90 bp | GGAGCACCTTGGCGAACAGCTGAGAGGACTCTGGGTGATTCAGCTTaGGCTGCAGTTCCAGGGCCTGCAGCAGGTTGTCTTGGATGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GAPWRTAERTLGDSA*AAVPGPAAGCLGCP Trigger: AGGACATCCAAGACAACCTGCTGCAGGCCCTGGAACTGCAGCTCAAGCTGAATCACCCAGAGTCCTCTCAGCTGTTCGCCAAGGTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 90 bp | GATATCACTGGAGATCTCCGCCAACAGCTTCTCCTTCTCGGCCTGTaGCATCCGCCCAAACCTGATGGCATTGTGAGACATCCCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: DITGDLRQQLLLLGL*HPPKPDGIVRHPHS Trigger: GCTGTGGGGATGTCTCACAATGCCATCAGGTTTGGGCGGATGCCACAGGCCGAGAAGGAGAAGCTGTTGGCGGAGATCTCCAGTGATATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000205213.3 |
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| CDS CCA 90 bp | GTCTGTCATCTTCTGGAGCACCTTGGCGAACAGCTGAGAGGACTCTaGGTGATTCAGCTTGAGCTGCAGTTCCAGGGCCTGCAGCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: VCHLLEHLGEQLRGL*VIQLELQFQGLQQV Trigger: AACCTGCTGCAGGCCCTGGAACTGCAGCTCAAGCTGAATCACCCAGAGTCCTCTCAGCTGTTCGCCAAGGTGCTCCAGAAGATGACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS TCA 90 bp | TCTGTGATCTCTTGCACGGCTTCTACGGATCGAAACTGGCACCCTTaGAAAATTCGGATGGCCACCTCTTTGCTCTGCTCCTGCAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: SVISCTASTDRNWHP*KIRMATSLLCSCRG Trigger: CCCCCTGCAGGAGCAGAGCAAAGAGGTGGCCATCCGAATTTTTCAAGGGTGCCAGTTTCGATCCGTAGAAGCCGTGCAAGAGATCACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 90 bp | AAATGCTTTGCCAGGGCTCGCAGATCAGCAGACTCTGGGTTCAGCTaGTCGATATCACTGGAGATCTCCGCCAACAGCTTCTCCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: KCFARARRSADSGFS*SISLEISANSFSFS Trigger: CGAGAAGGAGAAGCTGTTGGCGGAGATCTCCAGTGATATCGACCAGCTGAACCCAGAGTCTGCTGATCTGCGAGCCCTGGCAAAGCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000205213.3 |
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| CDS TCA 90 bp | CAAAGGAATGCGAGTGGTCTTCCATCACGGAGAGGTCCACAGAGCTaGTTCCGAAGTTGGTGGGCCAGAATGGCATCTCTGTGTCAACCA | + |
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Preference number: 5 (lower is better) Translates to: QRNASGLPSRRGPQS*FRSWWARMASLCQP Trigger: TGGTTGACACAGAGATGCCATTCTGGCCCACCAACTTCGGAATCAGCTCTGTGGACCTCTCCGTGATGGAAGACCACTCGCATTCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS TCA 90 bp | GATCGCCCTCGCCTTGGCTTTGGTCAGCGGGAAGGACTTTATGTATaGGTCATACAAATGCTTTGCCAGGGCTCGCAGATCAGCAGACTC | + |
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Preference number: 5 (lower is better) Translates to: DRPRLGFGQREGLYV*VIQMLCQGSQISRL Trigger: GAGTCTGCTGATCTGCGAGCCCTGGCAAAGCATTTGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS TCA 90 bp | CCGCAGGCTTTTGAGGAACTCCCTGGTCATGAATCCTTGGCCCTCTaGGATGAGGACTCCATCTTTATTCATCAGGGAGGCCAGCATCGT | + |
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Preference number: 5 (lower is better) Translates to: PQAFEELPGHESLAL*DEDSIFIHQGGQHR Trigger: ACGATGCTGGCCTCCCTGATGAATAAAGATGGAGTCCTCATCTCAGAGGGCCAAGGATTCATGACCAGGGAGTTCCTCAAAAGCCTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 90 bp | AAGGGCTTCCGCAGGCTTTTGAGGAACTCCCTGGTCATGAATCCTTaGCCCTCTGAGATGAGGACTCCATCTTTATTCATCAGGGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: KGFRRLLRNSLVMNP*PSEMRTPSLFIREA Trigger: GGCCTCCCTGATGAATAAAGATGGAGTCCTCATCTCAGAGGGCCAAGGATTCATGACCAGGGAGTTCCTCAAAAGCCTGCGGAAGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS TCA 90 bp | GGTGGGCCAGAATGGCATCTCTGTGTCAACCATGGTAATTTCTTGTaGAGTGCTCATAGGCAGTGCATCAGCGAAGGCACCATGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GGPEWHLCVNHGNFL*SAHRQCISEGTMLW Trigger: CCAGAGCATGGTGCCTTCGCTGATGCACTGCCTATGAGCACTTCACAAGAAATTACCATGGTTGACACAGAGATGCCATTCTGGCCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000450.5 |
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| CDS GCA 90 bp | TTGGCTTTGGTCAGCGGGAAGGACTTTATGTATGAGTCATACAAATaGTTTGCCAGGGCTCGCAGATCAGCAGACTCTGGGTTCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LALVSGKDFMYESYK*FARARRSADSGFSW Trigger: CCAGCTGAACCCAGAGTCTGCTGATCTGCGAGCCCTGGCAAAGCATTTGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS GCA 90 bp | ATGCTGGAGAAATCAACTGTGGTAAAGGGCTTGATGTCAAAGGAATaGGAGTGGTCTTCCATCACGGAGAGGTCCACAGAGCTGATTCCG | + |
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Preference number: 5 (lower is better) Translates to: MLEKSTVVKGLMSKE*EWSSITERSTELIP Trigger: CGGAATCAGCTCTGTGGACCTCTCCGTGATGGAAGACCACTCGCATTCCTTTGACATCAAGCCCTTTACCACAGTTGATTTCTCCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS CCA 90 bp | GAGAAATCAACTGTGGTAAAGGGCTTGATGTCAAAGGAATGCGAGTaGTCTTCCATCACGGAGAGGTCCACAGAGCTGATTCCGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: EKSTVVKGLMSKECE*SSITERSTELIPKL Trigger: CAACTTCGGAATCAGCTCTGTGGACCTCTCCGTGATGGAAGACCACTCGCATTCCTTTGACATCAAGCCCTTTACCACAGTTGATTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS CCA 90 bp | ATTTGTCCGTTGTCTTTCCTGTCAAGATCGCCCTCGCCTTGGCTTTaGTCAGCGGGAAGGACTTTATGTATGAGTCATACAAATGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: ICPLSFLSRSPSPWL*SAGRTLCMSHTNAL Trigger: CAAAGCATTTGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATCTTGACAGGAAAGACAACGGACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 90 bp | ATGGTGATTTGTCCGTTGTCTTTCCTGTCAAGATCGCCCTCGCCTTaGCTTTGGTCAGCGGGAAGGACTTTATGTATGAGTCATACAAAT | + |
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Preference number: 5 (lower is better) Translates to: MVICPLSFLSRSPSP*LWSAGRTLCMSHTN Trigger: ATTTGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATCTTGACAGGAAAGACAACGGACAAATCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS GCA 90 bp | AGGCCTGTTGTAGAGCTGGGTCTTTTCAGAATAATAAGGTGGAGATaGAGGTTCTACTTTGATCGCACTTTGGTATTCTTGGAGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: RPVVELGLFRIIRWR*RFYFDRTLVFLELQ Trigger: CTGAAGCTCCAAGAATACCAAAGTGCGATCAAAGTAGAACCTGCATCTCCACCTTATTATTCTGAAAAGACCCAGCTCTACAACAGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS TCA 90 bp | GCTTCAGGTCATATTTGTAATCAGCAACCATTGGGTCAGCTCTTGTaGATGGAATGTCTTCATAGTGTGGAGCAGAAATGCTGGAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: ASGHICNQQPLGQLL*MECLHSVEQKCWRN Trigger: ATTTCTCCAGCATTTCTGCTCCACACTATGAAGACATTCCATTCACAAGAGCTGACCCAATGGTTGCTGATTACAAATATGACCTGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS CCA 72 bp | CCAGGGCCTGCAGCAGGTTGTCTTGGATGTCCTCGATaGGCTTCACGTTCAGCAAGCCTGGGCGGTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: PGPAAGCLGCPR*ASRSASLGGLH Trigger: GTGGAGACCGCCCAGGCTTGCTGAACGTGAAGCCCATCGAGGACATCCAAGACAACCTGCTGCAGGCCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 72 bp | GCCAGGGCTCGCAGATCAGCAGACTCTGGGTTCAGCTaGTCGATATCACTGGAGATCTCCGCCAACAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ARARRSADSGFS*SISLEISANSF Trigger: GAAGCTGTTGGCGGAGATCTCCAGTGATATCGACCAGCTGAACCCAGAGTCTGCTGATCTGCGAGCCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000205213.3 |
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| CDS CCA 72 bp | CTTCTGGAGCACCTTGGCGAACAGCTGAGAGGACTCTaGGTGATTCAGCTTGAGCTGCAGTTCCAGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLEHLGEQLRGL*VIQLELQFQGL Trigger: CAGGCCCTGGAACTGCAGCTCAAGCTGAATCACCCAGAGTCCTCTCAGCTGTTCGCCAAGGTGCTCCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS TCA 72 bp | GCGAGTGGTCTTCCATCACGGAGAGGTCCACAGAGCTaGTTCCGAAGTTGGTGGGCCAGAATGGCATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ASGLPSRRGPQS*FRSWWARMASL Trigger: CAGAGATGCCATTCTGGCCCACCAACTTCGGAATCAGCTCTGTGGACCTCTCCGTGATGGAAGACCACTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS CCA 72 bp | GGAGATCTCCGCCAACAGCTTCTCCTTCTCGGCCTGTaGCATCCGCCCAAACCTGATGGCATTGTGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: GDLRQQLLLLGL*HPPKPDGIVRH Trigger: ATGTCTCACAATGCCATCAGGTTTGGGCGGATGCCACAGGCCGAGAAGGAGAAGCTGTTGGCGGAGATCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000205213.3 |
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| CDS CCA 72 bp | GATCAGCAGACTCTGGGTTCAGCTGGTCGATATCACTaGAGATCTCCGCCAACAGCTTCTCCTTCTCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: DQQTLGSAGRYH*RSPPTASPSRP Trigger: AGGCCGAGAAGGAGAAGCTGTTGGCGGAGATCTCCAGTGATATCGACCAGCTGAACCCAGAGTCTGCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000205213.3 |
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| CDS CCA 72 bp | CAAATGCTTTGCCAGGGCTCGCAGATCAGCAGACTCTaGGTTCAGCTGGTCGATATCACTGGAGATCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: QMLCQGSQISRL*VQLVDITGDLR Trigger: GCGGAGATCTCCAGTGATATCGACCAGCTGAACCCAGAGTCTGCTGATCTGCGAGCCCTGGCAAAGCATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000205213.3 |
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| CDS CAA 90 bp | CTCTGTGATCTCTTGCACGGCTTCTACGGATCGAAACTGGCACCCTaGAAAAATTCGGATGGCCACCTCTTTGCTCTGCTCCTGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LCDLLHGFYGSKLAP*KNSDGHLFALLLQG Trigger: CCCCTGCAGGAGCAGAGCAAAGAGGTGGCCATCCGAATTTTTCAAGGGTGCCAGTTTCGATCCGTAGAAGCCGTGCAAGAGATCACAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 72 bp | GCTCATAGGCAGTGCATCAGCGAAGGCACCATGCTCTaGGTCAACAGGAGAATCTCCCAGAGTTTCACCCAT | + |
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Preference number: 6 (lower is better) Translates to: AHRQCISEGTML*VNRRISQSFTH Trigger: ATGGGTGAAACTCTGGGAGATTCTCCTGTTGACCCAGAGCATGGTGCCTTCGCTGATGCACTGCCTATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000450.5 |
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| CDS CAA 72 bp | GGCTCCATAAAGTCACCAAAGGGCTTCCGCAGGCTTTaGAGGAACTCCCTGGTCATGAATCCTTGGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSIKSPKGFRRL*RNSLVMNPWPS Trigger: AGAGGGCCAAGGATTCATGACCAGGGAGTTCCTCAAAAGCCTGCGGAAGCCCTTTGGTGACTTTATGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 72 bp | CTCTTGCACGGCTTCTACGGATCGAAACTGGCACCCTaGAAAAATTCGGATGGCCACCTCTTTGCTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLHGFYGSKLAP*KNSDGHLFALL Trigger: GAGCAGAGCAAAGAGGTGGCCATCCGAATTTTTCAAGGGTGCCAGTTTCGATCCGTAGAAGCCGTGCAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 90 bp | GAGTGGTCTTCCATCACGGAGAGGTCCACAGAGCTGATTCCGAAGTaGGTGGGCCAGAATGGCATCTCTGTGTCAACCATGGTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: EWSSITERSTELIPK*VGQNGISVSTMVIS Trigger: AGAAATTACCATGGTTGACACAGAGATGCCATTCTGGCCCACCAACTTCGGAATCAGCTCTGTGGACCTCTCCGTGATGGAAGACCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000450.5 |
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| CDS CAA 90 bp | CTTTGGTCAGCGGGAAGGACTTTATGTATGAGTCATACAAATGCTTaGCCAGGGCTCGCAGATCAGCAGACTCTGGGTTCAGCTGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: LWSAGRTLCMSHTNA*PGLADQQTLGSAGR Trigger: TCGACCAGCTGAACCCAGAGTCTGCTGATCTGCGAGCCCTGGCAAAGCATTTGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS TCA 72 bp | CGCCTTGGCTTTGGTCAGCGGGAAGGACTTTATGTATaGGTCATACAAATGCTTTGCCAGGGCTCGCAGATC | + |
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Preference number: 6 (lower is better) Translates to: RLGFGQREGLYV*VIQMLCQGSQI Trigger: GATCTGCGAGCCCTGGCAAAGCATTTGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS GCA 72 bp | GTCAGCGGGAAGGACTTTATGTATGAGTCATACAAATaGTTTGCCAGGGCTCGCAGATCAGCAGACTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VSGKDFMYESYK*FARARRSADSG Trigger: CCCAGAGTCTGCTGATCTGCGAGCCCTGGCAAAGCATTTGTATGACTCATACATAAAGTCCTTCCCGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 72 bp | TGTCCGTTGTCTTTCCTGTCAAGATCGCCCTCGCCTTaGCTTTGGTCAGCGGGAAGGACTTTATGTATGAGT | + |
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Preference number: 6 (lower is better) Translates to: CPLSFLSRSPSP*LWSAGRTLCMS Trigger: ACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATCTTGACAGGAAAGACAACGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 72 bp | TTGTCCGTTGTCTTTCCTGTCAAGATCGCCCTCGCCTaGGCTTTGGTCAGCGGGAAGGACTTTATGTATGAG | + |
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Preference number: 6 (lower is better) Translates to: LSVVFPVKIALA*ALVSGKDFMYE Trigger: CTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATCTTGACAGGAAAGACAACGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS TCA 72 bp | TTTGAGGAACTCCCTGGTCATGAATCCTTGGCCCTCTaGGATGAGGACTCCATCTTTATTCATCAGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: FEELPGHESLAL*DEDSIFIHQGG Trigger: GCCTCCCTGATGAATAAAGATGGAGTCCTCATCTCAGAGGGCCAAGGATTCATGACCAGGGAGTTCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 72 bp | ACTGTGGTAAAGGGCTTGATGTCAAAGGAATGCGAGTaGTCTTCCATCACGGAGAGGTCCACAGAGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: TVVKGLMSKECE*SSITERSTELI Trigger: AATCAGCTCTGTGGACCTCTCCGTGATGGAAGACCACTCGCATTCCTTTGACATCAAGCCCTTTACCACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS CCA 72 bp | CGCAGGCTTTTGAGGAACTCCCTGGTCATGAATCCTTaGCCCTCTGAGATGAGGACTCCATCTTTATTCATC | + |
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Preference number: 6 (lower is better) Translates to: RRLLRNSLVMNP*PSEMRTPSLFI Trigger: GATGAATAAAGATGGAGTCCTCATCTCAGAGGGCCAAGGATTCATGACCAGGGAGTTCCTCAAAAGCCTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 72 bp | GTTGTCTTTCCTGTCAAGATCGCCCTCGCCTTGGCTTaGGTCAGCGGGAAGGACTTTATGTATGAGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: VVFPVKIALALA*VSGKDFMYESY Trigger: GTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATCTTGACAGGAAAGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS TCA 72 bp | GAATGGCATCTCTGTGTCAACCATGGTAATTTCTTGTaGAGTGCTCATAGGCAGTGCATCAGCGAAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: EWHLCVNHGNFL*SAHRQCISEGT Trigger: GGTGCCTTCGCTGATGCACTGCCTATGAGCACTTCACAAGAAATTACCATGGTTGACACAGAGATGCCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000450.5 |
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| CDS GCA 72 bp | AAATCAACTGTGGTAAAGGGCTTGATGTCAAAGGAATaGGAGTGGTCTTCCATCACGGAGAGGTCCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: KSTVVKGLMSKE*EWSSITERSTE Trigger: CTCTGTGGACCTCTCCGTGATGGAAGACCACTCGCATTCCTTTGACATCAAGCCCTTTACCACAGTTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS CCA 72 bp | TTGTCTTTCCTGTCAAGATCGCCCTCGCCTTGGCTTTaGTCAGCGGGAAGGACTTTATGTATGAGTCATACA | + |
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Preference number: 6 (lower is better) Translates to: LSFLSRSPSPWL*SAGRTLCMSHT Trigger: TGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATCTTGACAGGAAAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 72 bp | GAAACCAGGGATATTTTTGGCATACTCTGTGATCTCTaGCACGGCTTCTACGGATCGAAACTGGCACCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ETRDIFGILCDL*HGFYGSKLAPL Trigger: CAAGGGTGCCAGTTTCGATCCGTAGAAGCCGTGCAAGAGATCACAGAGTATGCCAAAAATATCCCTGGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 90 bp | GATTTGTCCGTTGTCTTTCCTGTCAAGATCGCCCTCGCCTTGGCTTaGGTCAGCGGGAAGGACTTTATGTATGAGTCATACAAATGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DLSVVFPVKIALALA*VSGKDFMYESYKCF Trigger: AAAGCATTTGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATCTTGACAGGAAAGACAACGGACAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 90 bp | AATGGTGATTTGTCCGTTGTCTTTCCTGTCAAGATCGCCCTCGCCTaGGCTTTGGTCAGCGGGAAGGACTTTATGTATGAGTCATACAAA | + |
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Preference number: 6 (lower is better) Translates to: NGDLSVVFPVKIALA*ALVSGKDFMYESYK Trigger: TTTGTATGACTCATACATAAAGTCCTTCCCGCTGACCAAAGCCAAGGCGAGGGCGATCTTGACAGGAAAGACAACGGACAAATCACCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 90 bp | AAGGTTAATGAAACCAGGGATATTTTTGGCATACTCTGTGATCTCTaGCACGGCTTCTACGGATCGAAACTGGCACCCTTGAAAAATTCG | + |
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Preference number: 6 (lower is better) Translates to: KVNETRDIFGILCDL*HGFYGSKLAPLKNS Trigger: CGAATTTTTCAAGGGTGCCAGTTTCGATCCGTAGAAGCCGTGCAAGAGATCACAGAGTATGCCAAAAATATCCCTGGTTTCATTAACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CCA 72 bp | TTTGTAATCAGCAACCATTGGGTCAGCTCTTGTGAATaGAATGTCTTCATAGTGTGGAGCAGAAATGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: FVISNHWVSSCE*NVFIVWSRNAG Trigger: TCCAGCATTTCTGCTCCACACTATGAAGACATTCCATTCACAAGAGCTGACCCAATGGTTGCTGATTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS TCA 72 bp | CATATTTGTAATCAGCAACCATTGGGTCAGCTCTTGTaGATGGAATGTCTTCATAGTGTGGAGCAGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: HICNQQPLGQLL*MECLHSVEQKC Trigger: GCATTTCTGCTCCACACTATGAAGACATTCCATTCACAAGAGCTGACCCAATGGTTGCTGATTACAAATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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| CDS CCA 72 bp | ATGATCTCATGGACACCATACTTGAGCAGAGTCACTTaGTCATTCAAATCAAGGTTAATGAAACCAGGGATA | + |
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Preference number: 6 (lower is better) Translates to: MISWTPYLSRVT*SFKSRLMKPGI Trigger: TATCCCTGGTTTCATTAACCTTGATTTGAATGACCAAGTGACTCTGCTCAAGTATGGTGTCCATGAGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 |
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| CDS CAA 72 bp | AGATGCAGGTTCTACTTTGATCGCACTTTGGTATTCTaGGAGCTTCAGGTCATATTTGTAATCAGCAACCAT | + |
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Preference number: 6 (lower is better) Translates to: RCRFYFDRTLVF*ELQVIFVISNH Trigger: ATGGTTGCTGATTACAAATATGACCTGAAGCTCCAAGAATACCAAAGTGCGATCAAAGTAGAACCTGCATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000450.5 ENSMUST00000171644.8 ENSMUST00000203732.3 ENSMUST00000204305.3 ENSMUST00000205213.3 |
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