Pregenerated sensors for PPARD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002250Ensembl transcript IDs: ENSMUST00000002320.16, ENSMUST00000166744.8, ENSMUST00000169040.3, ENSMUST00000232879.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAGGGGTGCTGATGGAGGGCCTGCCCACTCGCTGTCTAGCTTCTaGCCCTGGGACCTAAGTGTGCCGCTGCTCCTTCCGGCCTGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: RRGADGGPAHSLSSF*PWDLSVPLLLPACL Trigger: GAGGCAGGCCGGAAGGAGCAGCGGCACACTTAGGTCCCAGGGTCAGAAGCTAGACAGCGAGTGGGCAGGCCCTCCATCAGCACCCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 90 bp | GGGGAATCTGGCAGCATTCTGTGTTGGCAGGAGCCGAGCCTGGGCTaGTCACCTATGGGCCTAGAGGCAGGATCTGCCGGGCTGGGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: GESGSILCWQEPSLG*SPMGLEAGSAGLGL Trigger: CAGCCCCAGCCCGGCAGATCCTGCCTCTAGGCCCATAGGTGATCAGCCCAGGCTCGGCTCCTGCCAACACAGAATGCTGCCAGATTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR GCA 90 bp | AGACAGCCTGGGAATATGGCTCCCGGCCCAGGCTCCCTGCCCACTTaGTCTCTGGAGGAGGAACCCTGTGGTGGTGACCACAAGCTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: RQPGNMAPGPGSLPT*SLEEEPCGGDHKLG Trigger: TCCCAGCTTGTGGTCACCACCACAGGGTTCCTCCTCCAGAGAGCAAGTGGGCAGGGAGCCTGGGCCGGGAGCCATATTCCCAGGCTGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR GCA 90 bp | GACCTAGGACGCCGGCGAGAAGAAAGGAAGTGTCAGAGAGTGGTGTaGCTAGGGCTGAGACAGCCTGGGAATATGGCTCCCGGCCCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: DLGRRREERKCQRVV*LGLRQPGNMAPGPG Trigger: GCCTGGGCCGGGAGCCATATTCCCAGGCTGTCTCAGCCCTAGGCACACCACTCTCTGACACTTCCTTTCTTCTCGCCGGCGTCCTAGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 90 bp | TGGGGGTGTTGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTaGGTAGGCTCTAGCTGCTTGACTGCCAGTGCCTGTGGCTGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: WGCWGKSLGHVSGVL*VGSSCLTASACGWS Trigger: GGACCAGCCACAGGCACTGGCAGTCAAGCAGCTAGAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCAACACCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| 3UTR TCA 90 bp | GGCAGGACTGGGCCAGCACAGGCCCCACTGCTTTTAGGCTGCTGGTaGGCGTACCAACGGGCTGTCTGCTGTGAATCAGACAAATGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: GRTGPAQAPLLLGCW*AYQRAVCCESDKCE Trigger: CTCACATTTGTCTGATTCACAGCAGACAGCCCGTTGGTACGCTCACCAGCAGCCTAAAAGCAGTGGGGCCTGTGCTGGCCCAGTCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 90 bp | AGGGTCAGAGGAACCCTAGCAACTCTGCCTGTGAGCTGGCAGGGGTaGCCTGGTAGGATATCCCTGCCTGCTCACAGATCACCAGTCCTA | + |
|
Preference number: 1 (lower is better) Translates to: RVRGTLATLPVSWQG*PGRISLPAHRSPVL Trigger: TAGGACTGGTGATCTGTGAGCAGGCAGGGATATCCTACCAGGTCACCCCTGCCAGCTCACAGGCAGAGTTGCTAGGGTTCCTCTGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 90 bp | GGGCTGGGGCTGAGTATGGGAGCACCCAGCAAGTTTCAAGCCACTTaGAGCAGCAGATGGGAGCAGGTGACCAGCCAGGCAAAAGAAGAG | + |
|
Preference number: 1 (lower is better) Translates to: GLGLSMGAPSKFQAT*SSRWEQVTSQAKEE Trigger: CTCTTCTTTTGCCTGGCTGGTCACCTGCTCCCATCTGCTGCTTCAAGTGGCTTGAAACTTGCTGGGTGCTCCCATACTCAGCCCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 90 bp | GGGGGCAGGTGTGCCAGCATCTCCCAGGAGAAGAAAGAACAGCTATaGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: GGRCASISQEKKEQL*SSSWYWDLPVWMLL Trigger: TAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGCTGGCACACCTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 90 bp | ACAAGCTGGGATGGCAGTTGGTCCAGGCCAGGCTTCTTGGAAAGCTaGGCCCAGAGAGAGCGTAGTGTTTCTTTGGATGGCTCATGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: TSWDGSWSRPGFLES*AQRERSVSLDGSCL Trigger: AAGACATGAGCCATCCAAAGAAACACTACGCTCTCTCTGGGCCCAGCTTTCCAAGAAGCCTGGCCTGGACCAACTGCCATCCCAGCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 90 bp | GCCAGCATCTCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTCCTaGTACTGGGATCTGCCAGTCTGGATGCTGCTACAGGGTAGAGGA | + |
|
Preference number: 1 (lower is better) Translates to: ASISQEKKEQLWSSS*YWDLPVWMLLQGRG Trigger: TCCTCTACCCTGTAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 90 bp | CAGGCTTCTTGGAAAGCTGGGCCCAGAGAGAGCGTAGTGTTTCTTTaGATGGCTCATGTCTTTGAAGGGGATAGAGAGGAGAGGCAGGAC | + |
|
Preference number: 1 (lower is better) Translates to: QASWKAGPRESVVFL*MAHVFEGDREERQD Trigger: GTCCTGCCTCTCCTCTCTATCCCCTTCAAAGACATGAGCCATCCAAAGAAACACTACGCTCTCTCTGGGCCCAGCTTTCCAAGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACGGGCCCAGCAGAGCCTaGGGGGAGGCCTGGGCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: GGARALGRQQEQEVLRRNGPSRA*GEAWAA Trigger: CGCAGCCCAGGCCTCCCCTCAGGCTCTGCTGGGCCC...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGCTAGCGGGGAATCTGGCAGCATTCTGTGTTGGCAGGAGCCGAGCCTGGGCCCGGCCCAGGCTCCCTaGCCACTTGCTCTCTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CASGESGSILCWQEPSLGPAQAP*PLALWR Trigger: CCTCCAGAGAGCAAGTGGGCAGGGAGCCTGGGCCGG...GCCCAGGCTCGGCTCCTGCCAACACAGAATGCTGCCAGATTCCCCGCTAGCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR TCA 90 bp | TGTGCTAGCGGGGAATCTGGCAGCATTCTGTGTTGGCAGGAGCCGAGCCTGGGCCTGTGGCTGGTCCTCTaGACAGTCCGTGGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: CASGESGSILCWQEPSLGLWLVL*TVRGWA Trigger: GGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAG...GCCCAGGCTCGGCTCCTGCCAACACAGAATGCTGCCAGATTCCCCGCTAGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGCTGTGGCTGGTCCTCTaGACAGTCCGTGGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GSKGARETARTGGAEEKQLWLVL*TVRGWA Trigger: GGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAG...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCTAAGAACAGGGCCATAGCTGTACCCCAGTGGCCTTGGGGAGGGAATGGGGACAGCCTGGGAATATaGCTCCCGGCCCAGGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SPKNRAIAVPQWPWGGNGDSLGI*LPAQAP Trigger: GGGAGCCTGGGCCGGGAGCCATATTCCCAGGCTGTC...CCCATTCCCTCCCCAAGGCCACTGGGGTACAGCTATGGCCCTGTTCTTAGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR GCA 90 bp | TTGGGGAGGGAATGGGAGGGACTCTGTGGTGACCGAGAGGTGAGCCAGTGTCATGGCTCCCTGCCCACTTaGTCTCTGGAGGAGGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: LGREWEGLCGDREVSQCHGSLPT*SLEEEP Trigger: GGGTTCCTCCTCCAGAGAGCAAGTGGGCAGGGAGCC...ATGACACTGGCTCACCTCTCGGTCACCACAGAGTCCCTCCCATTCCCTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAGAGCGTAGTGTTTCTTTGGATGGCTCATGTCTTTGAAGGGGATAGAGAGGGGCCCAGCAGAGCCTaGGGGGAGGCCTGGGCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: RESVVFLWMAHVFEGDREGPSRA*GEAWAA Trigger: CGCAGCCCAGGCCTCCCCTCAGGCTCTGCTGGGCCC...CTCTCTATCCCCTTCAAAGACATGAGCCATCCAAAGAAACACTACGCTCTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CAA 90 bp | GTGGTGACCACAAGCTGGGATGGCAGTTGGTCCAGGCCAGGCTTCTaGGAAAGCTGGGCCCAGAGAGAGCGTAGTGTTTCTTTGGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: VVTTSWDGSWSRPGF*ESWAQRERSVSLDG Trigger: GCCATCCAAAGAAACACTACGCTCTCTCTGGGCCCAGCTTTCCAAGAAGCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CAA 90 bp | CGGGCTGGGGCTGAGTATGGGAGCACCCAGCAAGTTTCAAGCCACTaGAAGCAGCAGATGGGAGCAGGTGACCAGCCAGGCAAAAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RAGAEYGSTQQVSSH*KQQMGAGDQPGKRR Trigger: TCTTCTTTTGCCTGGCTGGTCACCTGCTCCCATCTGCTGCTTCAAGTGGCTTGAAACTTGCTGGGTGCTCCCATACTCAGCCCCAGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTGTAGAGGAGGGGTGCTaGTGGAGGGCCTGCCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: ERTAMVQFLVLGSASLDAVEEGC*WRACPL Trigger: GAGTGGGCAGGCCCTCCATCAGCACCCCTCCTCTAC...AGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR GCA 90 bp | TTGGGGAGGGAATGGGAGGGACTCTGTGGTGACCGAGAGGTGAGCCAGTGTCATTGTCAGAGAGTGGTGTaGCTAGGGCTGAGACAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LGREWEGLCGDREVSQCHCQRVV*LGLRQP Trigger: AGGCTGTCTCAGCCCTAGGCACACCACTCTCTGACA...ATGACACTGGCTCACCTCTCGGTCACCACAGAGTCCCTCCCATTCCCTCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGCATCTCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGAGGGCTGAGACAGCCTaGGAATATGGCTCCCGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ASISQEKKEQLWSSSWYWRAETA*EYGSRP Trigger: GGGCCGGGAGCCATATTCCCAGGCTGTCTCAGCCCT...CCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTCCTCTGAACAGTCCGTaGCTGGGCCCAGCAGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ERTAMVQFLVLGSASLDAPLNSP*LGPAEP Trigger: AGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGG...AGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCTAAGAACAGGGCCATAGCTGTACCCCAGTGGCCTTGGGGAGGGAATGGGGACAAATGTGAGGACTaGGAGGAGGGGGATGCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPKNRAIAVPQWPWGGNGDKCED*EEGDAR Trigger: TCTAGCATCCCCCTCCTCCCAGTCCTCACATTTGTC...CCCATTCCCTCCCCAAGGCCACTGGGGTACAGCTATGGCCCTGTTCTTAGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTGGCTTCTTGGAAAGCTaGGCCCAGAGAGAGCGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: ERTAMVQFLVLGSASLDAGFLES*AQRERS Trigger: ACTACGCTCTCTCTGGGCCCAGCTTTCCAAGAAGCC...AGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR TCA 90 bp | GCATCTCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGGATCAAGAACAGGAGGTGCTaGGGAGAAACAGGAAACGGG | + |
|
Preference number: 2 (lower is better) Translates to: ASPRRRKNSYGPVPGTGIKNRRC*GETGNG Trigger: CCCGTTTCCTGTTTCTCCTCAGCACCTCCTGTTCTT...GATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCAAAAATATACATTTCAGATTTGGAGACTTCAGACCCTGAGAGGAGCTGCGGCAGGAGCCGAGCCTaGGCTGATCACCTATGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LAKIYISDLETSDPERSCGRSRA*ADHLWA Trigger: GGCCCATAGGTGATCAGCCCAGGCTCGGCTCCTGCC...GCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CAA 90 bp | AAACACGGGAAGCTGGGGCTCCTAGCAAAAATATACATTTCAGATTaGGAGACTTCAGACCCTGAGAGGAGCTGCATCCTCAGCACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KHGKLGLLAKIYISD*ETSDPERSCILSTR Trigger: TCTGGTGCTGAGGATGCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAGGAGCCCCAGCTTCCCGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCAAAAATATACATTTCAGATTTGGAGACTTCAGACCCTGAGAGGAGCTGCTGCCCACTTGCTCTCTaGAGGAGGAACCCTGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LAKIYISDLETSDPERSCCPLAL*RRNPVV Trigger: CACCACAGGGTTCCTCCTCCAGAGAGCAAGTGGGCA...GCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAATATACATTTCAGATTTGGAGACTTCAGACCCTGAGAGGAGCTGCATCCAAGAAAGAACAGCTATaGTCCAGTTCCTGGTACTGG | + |
|
Preference number: 2 (lower is better) Translates to: QKYTFQIWRLQTLRGAASKKEQL*SSSWYW Trigger: CCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTT...GGATGCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR GCA 72 bp | GGGAATATGGCTCCCGGCCCAGGCTCCCTGCCCACTTaGTCTCTGGAGGAGGAACCCTGTGGTGGTGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: GNMAPGPGSLPT*SLEEEPCGGDH Trigger: GTGGTCACCACCACAGGGTTCCTCCTCCAGAGAGCAAGTGGGCAGGGAGCCTGGGCCGGGAGCCATATTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR GCA 72 bp | GACAGCCTGGGAATATGGCTCCCGGCCCAGGCTCCCTaGCCACTTGCTCTCTGGAGGAGGAACCCTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DSLGIWLPAQAP*PLALWRRNPVV Trigger: CACCACAGGGTTCCTCCTCCAGAGAGCAAGTGGGCAGGGAGCCTGGGCCGGGAGCCATATTCCCAGGCTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | GGCCATAGCTGTACCCCAGTGGCCTTGGGGAGGGAATaGGAGGGACTCTGTGGTGACCGAGAGGTGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHSCTPVALGRE*EGLCGDREVSQ Trigger: CTGGCTCACCTCTCGGTCACCACAGAGTCCCTCCCATTCCCTCCCCAAGGCCACTGGGGTACAGCTATGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 72 bp | GCCCACTTGCTCTCTGGAGGAGGAACCCTGTGGTGGTaGCCACAAGCTGGGATGGCAGTTGGTCCAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AHLLSGGGTLWW*PQAGMAVGPGQ Trigger: CTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTCCTCCTCCAGAGAGCAAGTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 72 bp | GGAGGGAATGGGAGGGACTCTGTGGTGACCGAGAGGTaGGCCAGTGTCATGGCTACACCGGGGCAGCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGNGRDSVVTER*ASVMATPGQLQ Trigger: TTGCAGCTGCCCCGGTGTAGCCATGACACTGGCTCACCTCTCGGTCACCACAGAGTCCCTCCCATTCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 72 bp | AGTGGCCTTGGGGAGGGAATGGGAGGGACTCTGTGGTaGCCGAGAGGTGAGCCAGTGTCATGGCTACACCGG | + |
|
Preference number: 3 (lower is better) Translates to: SGLGEGMGGTLW*PRGEPVSWLHR Trigger: CCGGTGTAGCCATGACACTGGCTCACCTCTCGGTCACCACAGAGTCCCTCCCATTCCCTCCCCAAGGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 72 bp | GGGCCAGCACAGGCCCCACTGCTTTTAGGCTGCTGGTaGGCGTACCAACGGGCTGTCTGCTGTGAATCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GPAQAPLLLGCW*AYQRAVCCESD Trigger: GTCTGATTCACAGCAGACAGCCCGTTGGTACGCTCACCAGCAGCCTAAAAGCAGTGGGGCCTGTGCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | AACCCTGTGGTGGTGACCACAAGCTGGGATGGCAGTTaGTCCAGGCCAGGCTTCTTGGAAAGCTGGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NPVVVTTSWDGS*SRPGFLESWAQ Trigger: CTGGGCCCAGCTTTCCAAGAAGCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR GCA 72 bp | CGCCGGCGAGAAGAAAGGAAGTGTCAGAGAGTGGTGTaGCTAGGGCTGAGACAGCCTGGGAATATGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RRREERKCQRVV*LGLRQPGNMAP Trigger: GGGAGCCATATTCCCAGGCTGTCTCAGCCCTAGGCACACCACTCTCTGACACTTCCTTTCTTCTCGCCGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | GAGGAGGAACCCTGTGGTGGTGACCACAAGCTGGGATaGCAGTTGGTCCAGGCCAGGCTTCTTGGAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEEPCGGDHKLG*QLVQARLLGKL Trigger: CAGCTTTCCAAGAAGCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTCCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | ACCAGTCCTAAGAACAGGGCCATAGCTGTACCCCAGTaGCCTTGGGGAGGGAATGGGAGGGACTCTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TSPKNRAIAVPQ*PWGGNGRDSVV Trigger: CACCACAGAGTCCCTCCCATTCCCTCCCCAAGGCCACTGGGGTACAGCTATGGCCCTGTTCTTAGGACTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CAA 90 bp | GGACAGGGTCAGAGGAACCCTAGCAACTCTGCCTGTGAGCTGGCAGGGGTGACCGGATGGCTCATGTCTTaGAAGGGGATAGAGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GQGQRNPSNSACELAGVTGWLMS*KGIERR Trigger: TCTCCTCTCTATCCCCTTCAAAGACATGAGCCATCC...GGTCACCCCTGCCAGCTCACAGGCAGAGTTGCTAGGGTTCCTCTGACCCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 72 bp | TGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTaGGTAGGCTCTAGCTGCTTGACTGCCAGTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WGKSLGHVSGVL*VGSSCLTASAC Trigger: ACAGGCACTGGCAGTCAAGCAGCTAGAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| 3UTR TCA 72 bp | CTGAGTATGGGAGCACCCAGCAAGTTTCAAGCCACTTaGAGCAGCAGATGGGAGCAGGTGACCAGCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSMGAPSKFQAT*SSRWEQVTSQA Trigger: TGCCTGGCTGGTCACCTGCTCCCATCTGCTGCTTCAAGTGGCTTGAAACTTGCTGGGTGCTCCCATACTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | GATGGCAGTTGGTCCAGGCCAGGCTTCTTGGAAAGCTaGGCCCAGAGAGAGCGTAGTGTTTCTTTGGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: DGSWSRPGFLES*AQRERSVSLDG Trigger: GCCATCCAAAGAAACACTACGCTCTCTCTGGGCCCAGCTTTCCAAGAAGCCTGGCCTGGACCAACTGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR GCA 72 bp | AAGAACAGCTATGGTCCAGTTCCTGGTACTGGGATCTaGCAGTCTGGATGCTGCTACAGGGTAGAGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KNSYGPVPGTGI*QSGCCYRVEEG Trigger: CCCCTCCTCTACCCTGTAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | TGTGCCAGCATCTCCCAGGAGAAGAAAGAACAGCTATaGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CASISQEKKEQL*SSSWYWDLPVW Trigger: CCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGCTGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | AGAAGAGAAGGCCACAGAGCTACTGGTACAAGTGAGTaGGAGAGAGGACAGGGTCAGAGGAACCCTAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RREGHRATGTSE*ERGQGQRNPSN Trigger: GTTGCTAGGGTTCCTCTGACCCTGTCCTCTCTCCCACTCACTTGTACCAGTAGCTCTGTGGCCTTCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | TCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTCCTaGTACTGGGATCTGCCAGTCTGGATGCTGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: SQEKKEQLWSSS*YWDLPVWMLLQ Trigger: CTGTAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCAAAAATATACATTTCAGATTTGGAGACTTCAGACCCTGAGAGGAGCTGCTGGCAGCATTCTGTGTaGGCAGGAGCCGAGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LAKIYISDLETSDPERSCWQHSV*AGAEPG Trigger: CCCAGGCTCGGCTCCTGCCAACACAGAATGCTGCCA...GCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | TGGAAAGCTGGGCCCAGAGAGAGCGTAGTGTTTCTTTaGATGGCTCATGTCTTTGAAGGGGATAGAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WKAGPRESVVFL*MAHVFEGDREE Trigger: CTCCTCTCTATCCCCTTCAAAGACATGAGCCATCCAAAGAAACACTACGCTCTCTCTGGGCCCAGCTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CCA 72 bp | GAGAAGAAAGAACAGCTATGGTCCAGTTCCTGGTACTaGGATCTGCCAGTCTGGATGCTGCTACAGGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: EKKEQLWSSSWY*DLPVWMLLQGR Trigger: TCTACCCTGTAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR TCA 72 bp | AAAAATATACATTTCAGATTTGGAGACTTCAGACCCTaGGAGGAGCTGCATCCTCAGCACCAGACCTGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: KNIHFRFGDFRP*EELHPQHQTWA Trigger: CGCCCAGGTCTGGTGCTGAGGATGCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGGGGAGGCGAAGCCACTGCCGTTaGCCACCAGCAGCCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAGPLNSPWLGPAEPEGRRSHCR*PPAARL Trigger: AAGACGGGCTGCTGGTGGCCAACGGCAGTGGCTTCG...CCTCCCCTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGATTCAGGTCGGCCAGCTaGGGGTTGTGCTGGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRFRSAS*GLCWHP Trigger: GGGGTGCCAGCACAACCCCCAGCTGGCCGACCTGAA...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGACGAAGCCACTGCCGTTaGCCACCAGCAGCCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRRSHCR*PPAARL Trigger: AAGACGGGCTGCTGGTGGCCAACGGCAGTGGCTTCG...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGTCTTGGCGAACTCGGTaGGCTCTCGGACTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPVAGPLNSPWLGPAEPESWRTR*ALGLSP Trigger: TGGAGACAGTCCGAGAGCTCACCGAGTTCGCCAAGA...CTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGTTGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTGAGTAGGCTCCCTGGGGCACATTCATaGGGCCTGGCCGGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVLGEESGPRVWSVVSRLPGAHS*GLAGLH Trigger: GTGGAGACCGGCCAGGCCTCATGAATGTGCCCCAGG...GAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCAACACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | AGGAACCCTGTGGTGGTGACCACAAGCTGGGATGGCAGTTGGTCCAGGCCAGGCTCTGGGCATGCTCAGTaGCCAGCTGCCGCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNPVVVTTSWDGSWSRPGSGHAQ*PAAAGL Trigger: CAGACCTGCGGCAGCTGGTCACTGAGCATGCCCAGA...GCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR GCA 90 bp | GTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGTGCTCAGTGACCAGCTaGCGCAGGTCTGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPVAGPLNSPWLGPAEPECSVTS*RRSAIF Trigger: GAAGATGGCAGACCTGCGGCAGCTGGTCACTGAGCA...CTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCAGAGAGTGGTGTGCCTAGGGCTGAGACAGCCTGGGAATATGGCTCCCGCTGGCACCCCTCGCTaGCAGTCAGCCCCGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KCQRVVCLGLRQPGNMAPAGTPR*QSAPPP Trigger: TGGTGGCGGGGCTGACTGCCAGCGAGGGGTGCCAGC...GGGAGCCATATTCCCAGGCTGTCTCAGCCCTAGGCACACCACTCTCTGACACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGGGGTGACCTGGTAGGATATCCCTGCCTGCTCACAGATCACCAGTCCTTCAGGTCGGCCAGCTaGGGGTTGTGCTGGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGRGDLVGYPCLLTDHQSFRSAS*GLCWHP Trigger: GGGGTGCCAGCACAACCCCCAGCTGGCCGACCTGAA...GGACTGGTGATCTGTGAGCAGGCAGGGATATCCTACCAGGTCACCCCTGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGGGGAGGCTGTCTCCACTGTGGTaGACTGGCAGCGGTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VAGPLNSPWLGPAEPEGRLSPLW*TGSGRT Trigger: TGTTCTACCGCTGCCAGTCCACCACAGTGGAGACAG...CCTCCCCTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCTAGCGGGGAATCTGGCAGCATTCTGTGTTGGCAGGAGCCGAGCCTGGGCGCAGCCCGTCTTTGTTaGCGATGGAGGCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CASGESGSILCWQEPSLGAARLC*RWRPAW Trigger: CCATGCTGGCCTCCATCGTCAACAAAGACGGGCTGC...GCCCAGGCTCGGCTCCTGCCAACACAGAATGCTGCCAGATTCCCCGCTAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR TCA 90 bp | GGACAGGGTCAGAGGAACCCTAGCAACTCTGCCTGTGAGCTGGCAGGGGTGACCGCAAGAACTCGTGGGTaGCGAAGCCACTGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQGQRNPSNSACELAGVTARTRG*RSHCRW Trigger: CCAACGGCAGTGGCTTCGTCACCCACGAGTTCTTGC...GGTCACCCCTGCCAGCTCACAGGCAGAGTTGCTAGGGTTCCTCTGACCCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACTCTGGGCATGCTCAGTaGCCAGCTGCCGCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGARALGRQQEQEVLRRNSGHAQ*PAAAGL Trigger: CAGACCTGCGGCAGCTGGTCACTGAGCATGCCCAGA...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGACACCAGGCCCTTCTCTaGCTGCCACAGTGTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRHQALL*LPQCLD Trigger: ATCGAGACACTGTGGCAGGCAGAGAAGGGCCTGGTG...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGGCAAAGATGGCCTCGTaGACGCCATACTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPVAGPLNSPWLGPAEPEAKMAS*TPYLRR Trigger: CCTCCTCAAGTATGGCGTGCACGAGGCCATCTTTGC...CTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGGACTGTCTCCACTGTaGTGGACTGGCAGCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRGLSPL*WTGSGR Trigger: TCTACCGCTGCCAGTCCACCACAGTGGAGACAGTCC...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGACTTCGCAAGAACTCGTaGGTGACGAAGCCACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRLRKNS*VTKPLP Trigger: CGGCAGTGGCTTCGTCACCCACGAGTTCTTGCGAAG...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGAGCCACTGCATCATCTaGGCATGCTCAGTGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPVAGPLNSPWLGPAEPESHCII*ACSVTS Trigger: GCTGGTCACTGAGCATGCCCAGATGATGCAGTGGCT...CTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACGCAGCCCGTCTTTGTTaGCGATGGAGGCCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GGARALGRQQEQEVLRRNAARLC*RWRPAW Trigger: CCATGCTGGCCTCCATCGTCAACAAAGACGGGCTGC...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGGGCTGTCAGGGTGGTTaGCCTGCAGATGGAATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VPVAGPLNSPWLGPAEPEGCQGG*PADGIL Trigger: TAGAATTCCATCTGCAGGTCAACCACCCTGACAGCC...CTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | AGGAACCCTGTGGTGGTGACCACAAGCTGGGATGGCAGTTGGTCCAGGCCAGGCACAAAGGGTGCGTTGTaGCTGGACTTGCCGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNPVVVTTSWDGSWSRPGTKGAL*LDLPVR Trigger: CCTCACCGGCAAGTCCAGCCACAACGCACCCTTTGT...GCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGGGGAGGAGTGTCTCGATGTCGTaGATGACAAAGGGTGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAGPLNSPWLGPAEPEGRSVSMS*MTKGAL Trigger: CAACGCACCCTTTGTCATCCACGACATCGAGACACT...CCTCCCCTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | AGGAACCCTGTGGTGGTGACCACAAGCTGGGATGGCAGTTGGTCCAGGCCAGGCCTTCGCAAGAACTCGTaGGTGACGAAGCCACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RNPVVVTTSWDGSWSRPGLRKNS*VTKPLP Trigger: CGGCAGTGGCTTCGTCACCCACGAGTTCTTGCGAAG...GCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGATTGGGGAAGAGGTACTaGCTGTCAGGGTGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRLGKRY*LSGWLT Trigger: GGTCAACCACCCTGACAGCCAGTACCTCTTCCCCAA...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | ACCTATGGGCCTAGAGGCAGGATCTGCCGGGCTGGGGCTGAGTATGGGAGCACCAGCCACTGCATCATCTaGGCATGCTCAGTGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TYGPRGRICRAGAEYGSTSHCII*ACSVTS Trigger: GCTGGTCACTGAGCATGCCCAGATGATGCAGTGGCT...GGTGCTCCCATACTCAGCCCCAGCCCGGCAGATCCTGCCTCTAGGCCCATAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| 3UTR CAA 72 bp | GAACCCTGTGGTGGTGACCACAAGCTGGGATGGCAGTaGGTCCAGGCCAGGCTTCTTGGAAAGCTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPCGGDHKLGWQ*VQARLLGKLGP Trigger: TGGGCCCAGCTTTCCAAGAAGCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGCAGGTGACCAGCCAGGCAAAAGAAGAGAAGGCCACAGAGCTACTGGTGGCTGGACTTGCCGGTaGGGATGCTCCGGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGAGDQPGKRREGHRATGGWTCR*GCSGPS Trigger: AGAAGGCCCGGAGCATCCTCACCGGCAAGTCCAGCC...ACCAGTAGCTCTGTGGCCTTCTCTTCTTTTGCCTGGCTGGTCACCTGCTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR TCA 90 bp | TGTGCTAGCGGGGAATCTGGCAGCATTCTGTGTTGGCAGGAGCCGAGCCTGGGCTCTCGATGTCGTGGATaGCAAAGGGTGCGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CASGESGSILCWQEPSLGSRCRG*QRVRCG Trigger: GCCACAACGCACCCTTTGTCATCCACGACATCGAGA...GCCCAGGCTCGGCTCCTGCCAACACAGAATGCTGCCAGATTCCCCGCTAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR TCA 90 bp | GGGGTGTTGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTGAGTAGGCTCTCTTGGCGAACTCGGTaGGCTCTCGGACTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVLGEESGPRVWSVVSRLSWRTR*ALGLSP Trigger: TGGAGACAGTCCGAGAGCTCACCGAGTTCGCCAAGA...GAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCAACACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACCGTGCACGCCATACTTaGGGAGGGTCACCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGARALGRQQEQEVLRRNRARHT*GGSPGH Trigger: ATGACCAGGTGACCCTCCTCAAGTATGGCGTGCACG...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGGCAAGAACTCGTGGGTaGCGAAGCCACTGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSKGARETARTGGAEEKQARTRG*RSHCRW Trigger: CCAACGGCAGTGGCTTCGTCACCCACGAGTTCTTGC...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGGAGGGAATGGGAGGGACTCTGTGGTGACCGAGAGGTGAGCCAGTGTCATGTGCGACATGCCGAGTaGCAGGCACTTCTGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGREWEGLCGDREVSQCHVRHAE*QALLEA Trigger: CGCTTCCAGAAGTGCCTGGCACTCGGCATGTCGCAC...ATGACACTGGCTCACCTCTCGGTCACCACAGAGTCCCTCCCATTCCCTCCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR GCA 90 bp | GTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGTCAGGGTGGTTGACCTaGAGATGGAATTCTAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPVAGPLNSPWLGPAEPESGWLT*RWNSRA Trigger: GGCTCTAGAATTCCATCTGCAGGTCAACCACCCTGA...CTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGTTGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTGAGTAGGCTCTGCTCAGTGACCAGCTaGCGCAGGTCTGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVLGEESGPRVWSVVSRLCSVTS*RRSAIF Trigger: GAAGATGGCAGACCTGCGGCAGCTGGTCACTGAGCA...GAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCAACACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGGGGAGGGTCTTCTTTAGCCACTaGATCATCTGGGCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAGPLNSPWLGPAEPEGRVFFSH*IIWACS Trigger: TGAGCATGCCCAGATGATGCAGTGGCTAAAGAAGAC...CCTCCCCTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGATCCAAAGCGGATAGCTaGACAGCTGCTGGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRSKADS*TAAGRK Trigger: CTTCCTTCCAGCAGCTGTGCAGCTATCCGCTTTGGA...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGGGGTGACCTGGTAGGATATCCCTGCCTGCTCACAGATCACCAGTCCGGGCTCCGTCACCCATaGCCACTTCCTCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGRGDLVGYPCLLTDHQSGLRHP*PLPLSP Trigger: AGGAGAAAGAGGAAGTGGCCATGGGTGACGGAGCCC...GGACTGGTGATCTGTGAGCAGGCAGGGATATCCTACCAGGTCACCCCTGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACGGGCTCCGTCACCCATaGCCACTTCCTCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGARALGRQQEQEVLRRNGLRHP*PLPLSP Trigger: AGGAGAAAGAGGAAGTGGCCATGGGTGACGGAGCCC...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGATTGAGGAGGGTCACCTaGTCATTGAGGAAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRLRRVT*SLRKRL Trigger: CAGCCTCTTCCTCAATGACCAGGTGACCCTCCTCAA...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGACACATTCATGAGGCCTaGCCGGTCTCCACACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSRHIHEA*PVSTQN Trigger: ATTCTGTGTGGAGACCGGCCAGGCCTCATGAATGTG...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGAATGGTGTCCTGGATaGCTTCTACCTGGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TASACGWSSEQSVAGPSREWCPG*LLPGAH Trigger: ATGTGCCCCAGGTAGAAGCCATCCAGGACACCATTC...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACCCTGTGGTGGTGACCACAAGCTGGGATGGCAGTTGGTCCAGGCCAGGCATTCTGGGAGAGGTCTaGACAGCTGCTGGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNPVVVTTSWDGSWSRPGILGEV*TAAGRK Trigger: CTTCCTTCCAGCAGCTGTGCAGACCTCTCCCAGAAT...GCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGACAAAGGGTGCGTTGTaGCTGGACTTGCCGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSKGARETARTGGAEEKQTKGAL*LDLPVR Trigger: CCTCACCGGCAAGTCCAGCCACAACGCACCCTTTGT...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGGGACTGTCTCCACTGTaGTGGACTGGCAGCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSKGARETARTGGAEEKQGLSPL*WTGSGR Trigger: TCTACCGCTGCCAGTCCACCACAGTGGAGACAGTCC...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACCCAGCATGGCAAAGATaGCCTCGTGCACGCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: GGARALGRQQEQEVLRRNPAWQR*PRARHT Trigger: AGTATGGCGTGCACGAGGCCATCTTTGCCATGCTGG...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGTTGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTGAGTAGGCTCTTGGGGAAGAGGTACTaGCTGTCAGGGTGGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GVLGEESGPRVWSVVSRLLGKRY*LSGWLT Trigger: GGTCAACCACCCTGACAGCCAGTACCTCTTCCCCAA...GAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCAACACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGTCTCGATGTCGTGGATaGCAAAGGGTGCGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSKGARETARTGGAEEKQSRCRG*QRVRCG Trigger: GCCACAACGCACCCTTTGTCATCCACGACATCGAGA...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GCATCTCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGGATCCCTGGGGCACATTCATaGGGCCTGGCCGGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPRRRKNSYGPVPGTGIPGAHS*GLAGLH Trigger: GTGGAGACCGGCCAGGCCTCATGAATGTGCCCCAGG...GATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR GCA 90 bp | GCATCTCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGGATCGGCGGAAGAAGCCCTTaGACCCCTCGCACGCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASPRRRKNSYGPVPGTGIGGRSP*TPRTRG Trigger: TCCACGCGTGCGAGGGGTGCAAGGGCTTCTTCCGCC...GATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GGGGTGTTGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTGAGTAGGCTCTCTTCTGCAGCAGCTTaGGGAAGAGGTACTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVLGEESGPRVWSVVSRLSSAAA*GRGTGC Trigger: ACAGCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGA...GAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCAACACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGGGGAGGTCTTTTTGGTCATGTTaGAGTTTTTCAGGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VAGPLNSPWLGPAEPEGRSFWSC*SFSGRR Trigger: ACGCCTACCTGAAAAACTTCAACATGACCAAAAAGA...CCTCCCCTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGGGCTGTCAGGGTGGTTaGCCTGCAGATGGAATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GSKGARETARTGGAEEKQGCQGG*PADGIL Trigger: TAGAATTCCATCTGCAGGTCAACCACCCTGACAGCC...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGGTGTGCCAGCATCTCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTAGGCCCTTCTCTGCCTaGCACAGTGTCTCGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GAGVPASPRRRKNSYGPVRPFSA*HSVSMS Trigger: CGACATCGAGACACTGTGGCAGGCAGAGAAGGGCCT...AACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGCTGGCACACCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR GCA 90 bp | GCGTACCAACGGGCTGTCTGCTGTGAATCAGACAAATGTGAGGACTGGGAGGAGCACCAGGCCCTTCTCTaGCTGCCACAGTGTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AYQRAVCCESDKCEDWEEHQALL*LPQCLD Trigger: ATCGAGACACTGTGGCAGGCAGAGAAGGGCCTGGTG...CTCCTCCCAGTCCTCACATTTGTCTGATTCACAGCAGACAGCCCGTTGGTACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | AGGAACCCTGTGGTGGTGACCACAAGCTGGGATGGCAGTTGGTCCAGGCCAGGCTTGCGGTTCTTCTTCTaGATCTTGCAGATCCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: RNPVVVTTSWDGSWSRPGLRFFF*ILQIRS Trigger: CGATCGGATCTGCAAGATCCAGAAGAAGAACCGCAA...GCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | AGTCCTAAGAACAGGGCCATAGCTGTACCCCAGTGGCCTTGGGGAGGGAATGGGTTGAGGAGGGTCACCTaGTCATTGAGGAAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPKNRAIAVPQWPWGGNGLRRVT*SLRKRL Trigger: CAGCCTCTTCCTCAATGACCAGGTGACCCTCCTCAA...CCCATTCCCTCCCCAAGGCCACTGGGGTACAGCTATGGCCCTGTTCTTAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GGGGTGTTGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTGAGTAGGCTCTGGTTGACCTGCAGATaGAATTCTAGAGCCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVLGEESGPRVWSVVSRLWLTCR*NSRARR Trigger: TCTGCGGGCTCTAGAATTCCATCTGCAGGTCAACCA...GAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCAACACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGCAGGTGACCAGCCAGGCAAAAGAAGAGAAGGCCACAGAGCTACTGGTGCAAAGATGGCCTCGTaGACGCCATACTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MGAGDQPGKRREGHRATGAKMAS*TPYLRR Trigger: CCTCCTCAAGTATGGCGTGCACGAGGCCATCTTTGC...ACCAGTAGCTCTGTGGCCTTCTCTTCTTTTGCCTGGCTGGTCACCTGCTCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTGTCAGAGAGTGGTGTGCCTAGGGCTGAGACAGCCTGGGAATATGGCTGAAGGGGAGGAATTCTaGGAGAGGTCTGCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKCQRVVCLGLRQPGNMAEGEEF*ERSAQL Trigger: CAGCTGTGCAGACCTCTCCCAGAATTCCTCCCCTTC...AGCCATATTCCCAGGCTGTCTCAGCCCTAGGCACACCACTCTCTGACACTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GCTATGGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTGCTACAGGGCACATTCATGAGGCCTaGCCGGTCTCCACACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AMVQFLVLGSASLDAATGHIHEA*PVSTQN Trigger: ATTCTGTGTGGAGACCGGCCAGGCCTCATGAATGTG...CCCTGTAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGTGGTTGACCTGCAGATaGAATTCTAGAGCCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSKGARETARTGGAEEKQWLTCR*NSRARR Trigger: TCTGCGGGCTCTAGAATTCCATCTGCAGGTCAACCA...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGCGTAGTGTTTCTTTGGATGGCTCATGTCTTTGAAGGGGATAGAGAGGTTGAGGCTGCCGCCTaGGGCCCCATCACAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RESVVFLWMAHVFEGDREVEAAA*GPITAH Trigger: ATGGGCTGTGATGGGGCCTCAGGCGGCAGCCTCAAC...CTCTCTATCCCCTTCAAAGACATGAGCCATCCAAAGAAACACTACGCTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGCAGGTGACCAGCCAGGCAAAAGAAGAGAAGGCCACAGAGCTACTGGTTGGAAGCGGCAGTACTaGCACTTGTTGCGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MGAGDQPGKRREGHRATGWKRQY*HLLRFF Trigger: GAAGAACCGCAACAAGTGTCAGTACTGCCGCTTCCA...ACCAGTAGCTCTGTGGCCTTCTCTTCTTTTGCCTGGCTGGTCACCTGCTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR GCA 90 bp | GCTATGGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTGCTACAGGGTCAGGGTGGTTGACCTaGAGATGGAATTCTAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AMVQFLVLGSASLDAATGSGWLT*RWNSRA Trigger: GGCTCTAGAATTCCATCTGCAGGTCAACCACCCTGA...CCCTGTAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACTCTTTTTGGTCATGTTaGAGTTTTTCAGGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGARALGRQQEQEVLRRNSFWSC*SFSGRR Trigger: ACGCCTACCTGAAAAACTTCAACATGACCAAAAAGA...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTGAATGGTGTCCTGGATaGCTTCTACCTGGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ERTAMVQFLVLGSASLDAEWCPG*LLPGAH Trigger: ATGTGCCCCAGGTAGAAGCCATCCAGGACACCATTC...AGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGCTGTTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGGTGTGCCAGCATCTCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTTCTTCTTCTGGATCTTaGAGATCCGATCGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGVPASPRRRKNSYGPVSSSGS*RSDRTS Trigger: AGAAGTGCGATCGGATCTGCAAGATCCAGAAGAAGA...AACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGCTGGCACACCTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR TCA 90 bp | CACGGGAAGCTGGGGCTCCTAGCAAAAATATACATTTCAGATTTGGAGACTTCACGTGCACGCCATACTTaGGGAGGGTCACCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HGKLGLLAKIYISDLETSRARHT*GGSPGH Trigger: ATGACCAGGTGACCCTCCTCAAGTATGGCGTGCACG...TGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAGGAGCCCCAGCTTCCCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGCGTAGTGTTTCTTTGGATGGCTCATGTCTTTGAAGGGGATAGAGAGCCAGCATGGCAAAGATaGCCTCGTGCACGCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: RESVVFLWMAHVFEGDREPAWQR*PRARHT Trigger: AGTATGGCGTGCACGAGGCCATCTTTGCCATGCTGG...CTCTCTATCCCCTTCAAAGACATGAGCCATCCAAAGAAACACTACGCTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | CACGGGAAGCTGGGGCTCCTAGCAAAAATATACATTTCAGATTTGGAGACTTCACTGTCTCCACTGTGGTaGACTGGCAGCGGTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HGKLGLLAKIYISDLETSLSPLW*TGSGRT Trigger: TGTTCTACCGCTGCCAGTCCACCACAGTGGAGACAG...TGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAGGAGCCCCAGCTTCCCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CCA 90 bp | CACGGGAAGCTGGGGCTCCTAGCAAAAATATACATTTCAGATTTGGAGACTTCAAGTGTCTCGATGTCGTaGATGACAAAGGGTGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HGKLGLLAKIYISDLETSSVSMS*MTKGAL Trigger: CAACGCACCCTTTGTCATCCACGACATCGAGACACT...TGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAGGAGCCCCAGCTTCCCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR GCA 90 bp | CTAGCAAAAATATACATTTCAGATTTGGAGACTTCAGACCCTGAGAGGAGCTGCGTCTTCTTTAGCCACTaGATCATCTGGGCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAKIYISDLETSDPERSCVFFSH*IIWACS Trigger: TGAGCATGCCCAGATGATGCAGTGGCTAAAGAAGAC...GCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS TCA 90 bp | GGCCTTGTCCCCGCACACCCGACATTCCATGTTGAGGCTGCCGCCTaGGGCCCCATCACAGCCCATCTGCAGCTGGTCCAGCAGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLVPAHPTFHVEAAA*GPITAHLQLVQQGG Trigger: TCCTCCCTGCTGGACCAGCTGCAGATGGGCTGTGATGGGGCCTCAGGCGGCAGCCTCAACATGGAATGTCGGGTGTGCGGGGACAAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000169040.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAACGAAGCCACTGCCGTaGGCCACCAGCAGCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TASACGWSSEQSVAGPSRTKPLP*ATSSPS Trigger: AGACGGGCTGCTGGTGGCCAACGGCAGTGGCTTCGT...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGGGGAGGTCGTGCACGCCATACTaGAGGAGGGTCACCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VAGPLNSPWLGPAEPEGRSCTPY*RRVTWS Trigger: TGACCAGGTGACCCTCCTCAAGTATGGCGTGCACGA...CCTCCCCTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGTTGGGGGAAGAGTCTGGGCCACGTGTCTGGAGTGTTGTGAGTAGGCTCGCGTTGTGGCTGGACTaGCCGGTGAGGATGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVLGEESGPRVWSVVSRLALWLD*PVRMLR Trigger: CCGGAGCATCCTCACCGGCAAGTCCAGCCACAACGC...GAGCCTACTCACAACACTCCAGACACGTGGCCCAGACTCTTCCCCCAACACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAGCCTGAGAGCAGCCCGTCTTTGTaGACGATGGAGGCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VPVAGPLNSPWLGPAEPESSPSL*TMEASM Trigger: CATGCTGGCCTCCATCGTCAACAAAGACGGGCTGCT...CTCAGGCTCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAACCAGCAGCCCGTCTTaGTTGACGATGGAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TASACGWSSEQSVAGPSRTSSPS*LTMEAS Trigger: GCTGGCCTCCATCGTCAACAAAGACGGGCTGCTGGT...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS TCA 90 bp | GGTCTGCACAGCTGCTGGAAGGAAGCGTGTGTTCTGGTCCCCCATTaGGCTCCGGGGCTCCGTCACCCATGGCCACTTCCTCTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLHSCWKEACVLVPH*APGLRHPWPLPLSP Trigger: AGGAGAAAGAGGAAGTGGCCATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCTGTGCAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000169040.3 |
||
| CDS GCA 90 bp | GGGCGGCAGCCCGTTCACCAGCTGTTTCCACACCAGGCCCTTCTCTaGCTGCCACAGTGTCTCGATGTCGTGGATGACAAAGGGTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRQPVHQLFPHQALL*LPQCLDVVDDKGCV Trigger: AACGCACCCTTTGTCATCCACGACATCGAGACACTGTGGCAGGCAGAGAAGGGCCTGGTGTGGAAACAGCTGGTGAACGGGCTGCCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000169040.3 ENSMUST00000232879.2 |
||
| CDS CCA 90 bp | ATTCTGGGAGAGGTCTGCACAGCTGCTGGAAGGAAGCGTGTGTTCTaGTCCCCCATTGAGCTCCGGGGCTCCGTCACCCATGGCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILGEVCTAAGRKRVF*SPIELRGSVTHGHF Trigger: GAAGTGGCCATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCTGTGCAGACCTCTCCCAGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000169040.3 |
||
| CDS CCA 90 bp | TCCAAAGCGGATAGCTGCACAGCTGCTGGAAGGAAGCGTGTGTTCTaGTCCCCCATTGAGCTCCGGGGCTCCGTCACCCATGGCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKADSCTAAGRKRVF*SPIELRGSVTHGHF Trigger: GAAGTGGCCATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCTGTGCAGCTATCCGCTTTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACACCAGCAGCCCGTCTTaGTTGACGATGGAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGARALGRQQEQEVLRRNTSSPS*LTMEAS Trigger: GCTGGCCTCCATCGTCAACAAAGACGGGCTGCTGGT...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGAAAGAGGCTGCTGAAGTaGGGGATGTTCTTGGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TASACGWSSEQSVAGPSRKRLLK*GMFLAN Trigger: GTTCGCCAAGAACATCCCCAACTTCAGCAGCCTCTT...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GGACAGGGTCAGAGGAACCCTAGCAACTCTGCCTGTGAGCTGGCAGGGGTGACCATCTTCTGCAGCAGCTaGGGGAAGAGGTACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQGQRNPSNSACELAGVTIFCSS*GKRYWL Trigger: CAGCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGAT...GGTCACCCCTGCCAGCTCACAGGCAGAGTTGCTAGGGTTCCTCTGACCCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS TCA 90 bp | CTGTCTCCACTGTGGTGGACTGGCAGCGGTAGAACACGTGCACACTaGTCTCGTTGTAGGGCGGCAGCCCGTTCACCAGCTGTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSPLWWTGSGRTRAH*SRCRAAARSPAVST Trigger: TGTGGAAACAGCTGGTGAACGGGCTGCCGCCCTACAACGAGATCAGTGTGCACGTGTTCTACCGCTGCCAGTCCACCACAGTGGAGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GCTATGGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTGCTACAGGGCGAGCTTCATGCGGATaGTCCGGCGGAAGAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AMVQFLVLGSASLDAATGRASCG*SGGRSP Trigger: AGGGCTTCTTCCGCCGGACAATCCGCATGAAGCTCG...CCCTGTAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CAA 90 bp | TTGGGGAGGGAATGGGAGGGACTCTGTGGTGACCGAGAGGTGAGCCAGTGTCATTCGTGCACGCCATACTaGAGGAGGGTCACCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGREWEGLCGDREVSQCHSCTPY*RRVTWS Trigger: TGACCAGGTGACCCTCCTCAAGTATGGCGTGCACGA...ATGACACTGGCTCACCTCTCGGTCACCACAGAGTCCCTCCCATTCCCTCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS CCA 90 bp | TCAATGATGTCACTGAAGGGCTTGCGGAGACTTCGCAAGAACTCGTaGGTGACGAAGCCACTGCCGTTGGCCACCAGCAGCCCGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SMMSLKGLRRLRKNS*VTKPLPLATSSPSL Trigger: CAAAGACGGGCTGCTGGTGGCCAACGGCAGTGGCTTCGTCACCCACGAGTTCTTGCGAAGTCTCCGCAAGCCCTTCAGTGACATCATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCATCTCCCAGGAGAAGAAAGAACAGCTATGGTCCAGTTCCTGGTACTGGACCCGACATTCCATGTaGAGGCTGCCGCCTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASISQEKKEQLWSSSWYWTRHSM*RLPPEA Trigger: GGCCTCAGGCGGCAGCCTCAACATGGAATGTCGGGT...CCAGTACCAGGAACTGGACCATAGCTGTTCTTTCTTCTCCTGGGAGATGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACATGTCACTGAAGGGCTaGCGGAGACTTCGCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGARALGRQQEQEVLRRNMSLKG*RRLRKN Trigger: GTTCTTGCGAAGTCTCCGCAAGCCCTTCAGTGACAT...GTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGATCTTCTGCAGCAGCTaGGGGAAGAGGTACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSKGARETARTGGAEEKQIFCSS*GKRYWL Trigger: CAGCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGAT...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS GCA 90 bp | TGCAGCAGCTTGGGGAAGAGGTACTGGCTGTCAGGGTGGTTGACCTaGAGATGGAATTCTAGAGCCCGCAGAATGGTGTCCTGGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSLGKRYWLSGWLT*RWNSRARRMVSWMA Trigger: AGCCATCCAGGACACCATTCTGCGGGCTCTAGAATTCCATCTGCAGGTCAACCACCCTGACAGCCAGTACCTCTTCCCCAAGCTGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS CCA 90 bp | TGGTTGACCTGCAGATGGAATTCTAGAGCCCGCAGAATGGTGTCCTaGATGGCTTCTACCTGGGGCACATTCATGAGGCCTGGCCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLTCRWNSRARRMVS*MASTWGTFMRPGRS Trigger: AGACCGGCCAGGCCTCATGAATGTGCCCCAGGTAGAAGCCATCCAGGACACCATTCTGCGGGCTCTAGAATTCCATCTGCAGGTCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAGTGCCTGTGGCTGGTCCTCTGAACAGTCCGTGGCTGGGCCCAGCAGACTCCGGGCCTTCTTTTaGGTCATGTTGAAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TASACGWSSEQSVAGPSRLRAFF*VMLKFF Trigger: GAAAAACTTCAACATGACCAAAAAGAAGGCCCGGAG...TCTGCTGGGCCCAGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | AGGAACCCTGTGGTGGTGACCACAAGCTGGGATGGCAGTTGGTCCAGGCCAGGCTCCAGCGCATTGAACTaGACAGCAAACTCGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNPVVVTTSWDGSWSRPGSSALN*TANSNL Trigger: CAAGTTCGAGTTTGCTGTCAAGTTCAATGCGCTGGA...GCCTGGCCTGGACCAACTGCCATCCCAGCTTGTGGTCACCACCACAGGGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS CCA 90 bp | ATGGCAAAGATGGCCTCGTGCACGCCATACTTGAGGAGGGTCACCTaGTCATTGAGGAAGAGGCTGCTGAAGTTGGGGATGTTCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MAKMASCTPYLRRVT*SLRKRLLKLGMFLA Trigger: CGCCAAGAACATCCCCAACTTCAGCAGCCTCTTCCTCAATGACCAGGTGACCCTCCTCAAGTATGGCGTGCACGAGGCCATCTTTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS CCA 90 bp | AGCTTGGGGAAGAGGTACTGGCTGTCAGGGTGGTTGACCTGCAGATaGAATTCTAGAGCCCGCAGAATGGTGTCCTGGATGGCTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: SLGKRYWLSGWLTCR*NSRARRMVSWMAST Trigger: GGTAGAAGCCATCCAGGACACCATTCTGCGGGCTCTAGAATTCCATCTGCAGGTCAACCACCCTGACAGCCAGTACCTCTTCCCCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GCTATGGTCCAGTTCCTGGTACTGGGATCTGCCAGTCTGGATGCTGCTACAGGGAAGAGGCTGCTGAAGTaGGGGATGTTCTTGGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AMVQFLVLGSASLDAATGKRLLK*GMFLAN Trigger: GTTCGCCAAGAACATCCCCAACTTCAGCAGCCTCTT...CCCTGTAGCAGCATCCAGACTGGCAGATCCCAGTACCAGGAACTGGACCATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGCGTAGTGTTTCTTTGGATGGCTCATGTCTTTGAAGGGGATAGAGAGGCGTTGTGGCTGGACTaGCCGGTGAGGATGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RESVVFLWMAHVFEGDREALWLD*PVRMLR Trigger: CCGGAGCATCCTCACCGGCAAGTCCAGCCACAACGC...CTCTCTATCCCCTTCAAAGACATGAGCCATCCAAAGAAACACTACGCTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CAA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGTCCAGCGCATTGAACTaGACAGCAAACTCGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSKGARETARTGGAEEKQSSALN*TANSNL Trigger: CAAGTTCGAGTTTGCTGTCAAGTTCAATGCGCTGGA...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGCAAGGGCGCTAGGGAGACAGCAAGAACAGGAGGTGCTGAGGAGAAACAGCTCCGGGCCTTCTTTTaGGTCATGTTGAAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSKGARETARTGGAEEKQLRAFF*VMLKFF Trigger: GAAAAACTTCAACATGACCAAAAAGAAGGCCCGGAG...CTGTTTCTCCTCAGCACCTCCTGTTCTTGCTGTCTCCCTAGCGCCCTTGCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000232879.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCAAAAATATACATTTCAGATTTGGAGACTTCAGACCCTGAGAGGAGCTGCACGAAGCCACTGCCGTaGGCCACCAGCAGCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAKIYISDLETSDPERSCTKPLP*ATSSPS Trigger: AGACGGGCTGCTGGTGGCCAACGGCAGTGGCTTCGT...GCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGGATGGCTCATGTCTTTGAAGGGGATAGAGAGGAGAGGCAGGACTGGGTTCTTCTTCTGGATCTaGCAGATCCGATCGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFGWLMSLKGIERRGRTGFFFWI*QIRSHF Trigger: GAAGTGCGATCGGATCTGCAAGATCCAGAAGAAGAA...CCCAGTCCTGCCTCTCCTCTCTATCCCCTTCAAAGACATGAGCCATCCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CAA 90 bp | CAAAAATATACATTTCAGATTTGGAGACTTCAGACCCTGAGAGGAGCTGCATCCAGCAGCCCGTCTTTGTaGACGATGGAGGCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: QKYTFQIWRLQTLRGAASSSPSL*TMEASM Trigger: CATGCTGGCCTCCATCGTCAACAAAGACGGGCTGCT...GGATGCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS-3UTR CAA 90 bp | CTAGCAAAAATATACATTTCAGATTTGGAGACTTCAGACCCTGAGAGGAGCTGCATGTCACTGAAGGGCTaGCGGAGACTTCGCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LAKIYISDLETSDPERSCMSLKG*RRLRKN Trigger: GTTCTTGCGAAGTCTCCGCAAGCCCTTCAGTGACAT...GCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGTATATTTTTGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002320.16 |
||
| CDS TCA 72 bp | CCCGCACACCCGACATTCCATGTTGAGGCTGCCGCCTaGGGCCCCATCACAGCCCATCTGCAGCTGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAHPTFHVEAAA*GPITAHLQLVQ Trigger: CTGGACCAGCTGCAGATGGGCTGTGATGGGGCCTCAGGCGGCAGCCTCAACATGGAATGTCGGGTGTGCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000169040.3 |
||
| CDS CAA 72 bp | CAGCTGCTGGAAGGAAGCGTGTGTTCTGGTCCCCCATaGAGCTCCGGGGCTCCGTCACCCATGGCCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QLLEGSVCSGPP*SSGAPSPMATS Trigger: GGAAGTGGCCATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000169040.3 ENSMUST00000232879.2 |
||
| CDS TCA 72 bp | AGCTGCTGGAAGGAAGCGTGTGTTCTGGTCCCCCATTaGGCTCCGGGGCTCCGTCACCCATGGCCACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SCWKEACVLVPH*APGLRHPWPLP Trigger: AGGAAGTGGCCATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000169040.3 ENSMUST00000232879.2 |
||
| CDS CCA 72 bp | GAGGTCTGCACAGCTGCTGGAAGGAAGCGTGTGTTCTaGTCCCCCATTGAGCTCCGGGGCTCCGTCACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: EVCTAAGRKRVF*SPIELRGSVTH Trigger: ATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCTGTGCAGACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000169040.3 |
||
| CDS CAA 90 bp | AGGTCTGCACAGCTGCTGGAAGGAAGCGTGTGTTCTGGTCCCCCATaGAGCTCCGGGGCTCCGTCACCCATGGCCACTTCCTCTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSAQLLEGSVCSGPP*SSGAPSPMATSSFS Trigger: GGAGAAAGAGGAAGTGGCCATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCTGTGCAGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002320.16 ENSMUST00000169040.3 |
||
| CDS TCA 72 bp | CTGTGGTGGACTGGCAGCGGTAGAACACGTGCACACTaGTCTCGTTGTAGGGCGGCAGCCCGTTCACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LWWTGSGRTRAH*SRCRAAARSPA Trigger: AGCTGGTGAACGGGCTGCCGCCCTACAACGAGATCAGTGTGCACGTGTTCTACCGCTGCCAGTCCACCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000169040.3 ENSMUST00000232879.2 |
||
| CDS CCA 72 bp | TCACTGAAGGGCTTGCGGAGACTTCGCAAGAACTCGTaGGTGACGAAGCCACTGCCGTTGGCCACCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLKGLRRLRKNS*VTKPLPLATSS Trigger: GCTGCTGGTGGCCAACGGCAGTGGCTTCGTCACCCACGAGTTCTTGCGAAGTCTCCGCAAGCCCTTCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS CCA 72 bp | AGAGCCCGCAGAATGGTGTCCTGGATGGCTTCTACCTaGGGCACATTCATGAGGCCTGGCCGGTCTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: RARRMVSWMAST*GTFMRPGRSPH Trigger: GTGTGGAGACCGGCCAGGCCTCATGAATGTGCCCCAGGTAGAAGCCATCCAGGACACCATTCTGCGGGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS CCA 72 bp | GATAGCTGCACAGCTGCTGGAAGGAAGCGTGTGTTCTaGTCCCCCATTGAGCTCCGGGGCTCCGTCACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: DSCTAAGRKRVF*SPIELRGSVTH Trigger: ATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCTGTGCAGCTATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232879.2 |
||
| CDS CAA 72 bp | ACGAAGCCACTGCCGTTGGCCACCAGCAGCCCGTCTTaGTTGACGATGGAGGCCAGCATGGCAAAGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TKPLPLATSSPS*LTMEASMAKMA Trigger: GGCCATCTTTGCCATGCTGGCCTCCATCGTCAACAAAGACGGGCTGCTGGTGGCCAACGGCAGTGGCTTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS CAA 90 bp | ATAGCTGCACAGCTGCTGGAAGGAAGCGTGTGTTCTGGTCCCCCATaGAGCTCCGGGGCTCCGTCACCCATGGCCACTTCCTCTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IAAQLLEGSVCSGPP*SSGAPSPMATSSFS Trigger: GGAGAAAGAGGAAGTGGCCATGGGTGACGGAGCCCCGGAGCTCAATGGGGGACCAGAACACACGCTTCCTTCCAGCAGCTGTGCAGCTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232879.2 |
||
| CDS CAA 90 bp | GTCACCTGGTCATTGAGGAAGAGGCTGCTGAAGTTGGGGATGTTCTaGGCGAACTCGGTGAGCTCTCGGACTGTCTCCACTGTGGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VTWSLRKRLLKLGMF*ANSVSSRTVSTVVD Trigger: GTCCACCACAGTGGAGACAGTCCGAGAGCTCACCGAGTTCGCCAAGAACATCCCCAACTTCAGCAGCCTCTTCCTCAATGACCAGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS TCA 72 bp | GCAGCTTGGGGAAGAGGTACTGGCTGTCAGGGTGGTTaGCCTGCAGATGGAATTCTAGAGCCCGCAGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: AAWGRGTGCQGG*PADGILEPAEW Trigger: CCATTCTGCGGGCTCTAGAATTCCATCTGCAGGTCAACCACCCTGACAGCCAGTACCTCTTCCCCAAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS GCA 72 bp | CCCGTTCACCAGCTGTTTCCACACCAGGCCCTTCTCTaGCTGCCACAGTGTCTCGATGTCGTGGATGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: PVHQLFPHQALL*LPQCLDVVDDK Trigger: TTTGTCATCCACGACATCGAGACACTGTGGCAGGCAGAGAAGGGCCTGGTGTGGAAACAGCTGGTGAACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000169040.3 ENSMUST00000232879.2 |
||
| CDS CAA 72 bp | ATGTCGTGGATGACAAAGGGTGCGTTGTGGCTGGACTaGCCGGTGAGGATGCTCCGGGCCTTCTTTTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MSWMTKGALWLD*PVRMLRAFFLV Trigger: GACCAAAAAGAAGGCCCGGAGCATCCTCACCGGCAAGTCCAGCCACAACGCACCCTTTGTCATCCACGACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000169040.3 ENSMUST00000232879.2 |
||
| CDS CAA 72 bp | AGGGTCACCTGGTCATTGAGGAAGAGGCTGCTGAAGTaGGGGATGTTCTTGGCGAACTCGGTGAGCTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RVTWSLRKRLLK*GMFLANSVSSR Trigger: CCGAGAGCTCACCGAGTTCGCCAAGAACATCCCCAACTTCAGCAGCCTCTTCCTCAATGACCAGGTGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS GCA 72 bp | TTGGGGAAGAGGTACTGGCTGTCAGGGTGGTTGACCTaGAGATGGAATTCTAGAGCCCGCAGAATGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGKRYWLSGWLT*RWNSRARRMVS Trigger: GGACACCATTCTGCGGGCTCTAGAATTCCATCTGCAGGTCAACCACCCTGACAGCCAGTACCTCTTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS CAA 72 bp | AGCAGCTTGGGGAAGAGGTACTGGCTGTCAGGGTGGTaGACCTGCAGATGGAATTCTAGAGCCCGCAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: SSLGKRYWLSGW*TCRWNSRARRM Trigger: CATTCTGCGGGCTCTAGAATTCCATCTGCAGGTCAACCACCCTGACAGCCAGTACCTCTTCCCCAAGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS CCA 72 bp | TGCAGATGGAATTCTAGAGCCCGCAGAATGGTGTCCTaGATGGCTTCTACCTGGGGCACATTCATGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRWNSRARRMVS*MASTWGTFMRP Trigger: AGGCCTCATGAATGTGCCCCAGGTAGAAGCCATCCAGGACACCATTCTGCGGGCTCTAGAATTCCATCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||
| CDS CAA 72 bp | AACTCGAACTTGGGCTCAATGATGTCACTGAAGGGCTaGCGGAGACTTCGCAAGAACTCGTGGGTGACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: NSNLGSMMSLKG*RRLRKNSWVTK Trigger: CTTCGTCACCCACGAGTTCTTGCGAAGTCTCCGCAAGCCCTTCAGTGACATCATTGAGCCCAAGTTCGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002320.16 ENSMUST00000166744.8 ENSMUST00000232879.2 |
||