Pregenerated sensors for PPARA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022383Ensembl transcript IDs: ENSMUST00000057979.6, ENSMUST00000109422.8, ENSMUST00000109423.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCAACCTGCTCTGAAATATGTAGCCACCCCCTTGGAGGGTGGGTaGCGGGAGTCCATGAGGTCTGAGACTCCTTTGTGCAACTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: VQPALKYVATPLEGG*RESMRSETPLCNCF Trigger: GAAACAGTTGCACAAAGGAGTCTCAGACCTCATGGACTCCCGGCACCCACCCTCCAAGGGGGTGGCTACATATTTCAGAGCAGGTTGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR TCA 90 bp | ACCAAGTGTTGTGAGCTCTTCTGCTGGGTACAAACAGAAGCTGGATaGAATCACACCCTCGTCTCTTGTTCTCCAAGGCGACCAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: TKCCELFCWVQTEAG*NHTLVSCSPRRPAP Trigger: GGGAGCTGGTCGCCTTGGAGAACAAGAGACGAGGGTGTGATTTCATCCAGCTTCTGTTTGTACCCAGCAGAAGAGCTCACAACACTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR GCA 90 bp | AATCACACCCTCGTCTCTTGTTCTCCAAGGCGACCAGCTCCCTTCTaGCTGGATAGCGAAGTCACTTTTGCCTTCTCTACTCCAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: NHTLVSCSPRRPAPF*LDSEVTFAFSTPER Trigger: TCTCTCTGGAGTAGAGAAGGCAAAAGTGACTTCGCTATCCAGGCAGAAGGGAGCTGGTCGCCTTGGAGAACAAGAGACGAGGGTGTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR CCA 90 bp | ACACCCTCGTCTCTTGTTCTCCAAGGCGACCAGCTCCCTTCTGCCTaGATAGCGAAGTCACTTTTGCCTTCTCTACTCCAGAGAGATAGA | + |
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Preference number: 1 (lower is better) Translates to: TPSSLVLQGDQLPSA*IAKSLLPSLLQRDR Trigger: TCTATCTCTCTGGAGTAGAGAAGGCAAAAGTGACTTCGCTATCCAGGCAGAAGGGAGCTGGTCGCCTTGGAGAACAAGAGACGAGGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR TCA 90 bp | GCACAGACTAGCATCCCACTTAATTATGTATCTGAAGGCGACCTCTaGCTTCTGCTGGGGTTGCAGGCATCTACCACCATGTCCATAAAT | + |
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Preference number: 1 (lower is better) Translates to: AQTSIPLNYVSEGDL*LLLGLQASTTMSIN Trigger: ATTTATGGACATGGTGGTAGATGCCTGCAACCCCAGCAGAAGTCAGAGGTCGCCTTCAGATACATAATTAAGTGGGATGCTAGTCTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR TCA 90 bp | CATGAGTCAGTTACACCCTCCAGAACAGTGAGCCCACAGAGAGAGTaGTGGGATAGCTTATCAAACTATTCTCGAATGTTCTCAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: HESVTPSRTVSPQRE*WDSLSNYSRMFSEA Trigger: GGCTTCTGAGAACATTCGAGAATAGTTTGATAAGCTATCCCATCACTCTCTCTGTGGGCTCACTGTTCTGGAGGGTGTAACTGACTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| 3UTR TCA 90 bp | CTTTCCCCAGGGACTGAGGAAAAGGGACTTTACCACCTAATTCTTTaGAACAACAACAATAACAACAACAACAACAATAACCACAGACCA | + |
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Preference number: 1 (lower is better) Translates to: LSPGTEEKGLYHLIL*NNNNNNNNNNNHRP Trigger: TGGTCTGTGGTTATTGTTGTTGTTGTTGTTATTGTTGTTGTTTCAAAGAATTAGGTGGTAAAGTCCCTTTTCCTCAGTCCCTGGGGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGAACCAAGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTGGCAGTGACCAGACTGGGGACTaGCGTTGTCTGTCACTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TRNQAPPSTGLHPRLLGSDQTGD*RCLSLS Trigger: AGACAGTGACAGACAACGGCAGTCCCCAGTCTGGTC...ACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTTCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTGTTCTCCAAGGCGACCAGCTCCCTTCTGCCTGGATAGCGAAGTCACTTCTGATATTGCTGCCATaGCCACACGCTGAGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: SLVLQGDQLPSAWIAKSLLILLP*PHAEGL Trigger: CAGACCCTCAGCGTGTGGGCATGGCAGCAATATCAG...AAGTGACTTCGCTATCCAGGCAGAAGGGAGCTGGTCGCCTTGGAGAACAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCCCTTCTGCCTGGATAGCGAAGTCACTTTTGCCTTCTCTACTCCAGAGCTAGCGGAGGCCTTCTaGGGGCTTCTTGAAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: PAPFCLDSEVTFAFSTPELAEAF*GLLEDV Trigger: TACATCTTCAAGAAGCCCTCAGAAGGCCTCCGCTAG...CTCTGGAGTAGAGAAGGCAAAAGTGACTTCGCTATCCAGGCAGAAGGGAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR CCA 72 bp | AGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATaGGGCCGCAGGCCTCGGAGGTCCCTGAACAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: REALCANPCSPV*GRRPRRSLNSG Trigger: GCCACTGTTCAGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| 3UTR CCA 72 bp | ATAAATCGGCACCAGGAACCAAGCCCCTCCATCCACTaGGCTACATCCTCGACTCCTTGGCAGTGTCCATCT | + |
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Preference number: 3 (lower is better) Translates to: INRHQEPSPSIH*ATSSTPWQCPS Trigger: AGATGGACACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTTCCTGGTGCCGATTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR GCA 72 bp | CTCGTCTCTTGTTCTCCAAGGCGACCAGCTCCCTTCTaGCTGGATAGCGAAGTCACTTTTGCCTTCTCTACT | + |
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Preference number: 3 (lower is better) Translates to: LVSCSPRRPAPF*LDSEVTFAFST Trigger: AGTAGAGAAGGCAAAAGTGACTTCGCTATCCAGGCAGAAGGGAGCTGGTCGCCTTGGAGAACAAGAGACGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR CCA 72 bp | TCTCTTGTTCTCCAAGGCGACCAGCTCCCTTCTGCCTaGATAGCGAAGTCACTTTTGCCTTCTCTACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SLVLQGDQLPSA*IAKSLLPSLLQ Trigger: CTGGAGTAGAGAAGGCAAAAGTGACTTCGCTATCCAGGCAGAAGGGAGCTGGTCGCCTTGGAGAACAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR TCA 72 bp | CCCACCCTCATGAGTCAGTTACACCCTCCAGAACAGTaGGCCCACAGAGAGAGTGATGGGATAGCTTATCAA | + |
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Preference number: 3 (lower is better) Translates to: PTLMSQLHPPEQ*AHRESDGIAYQ Trigger: TTGATAAGCTATCCCATCACTCTCTCTGTGGGCTCACTGTTCTGGAGGGTGTAACTGACTCATGAGGGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| 3UTR TCA 72 bp | AGCATCCCACTTAATTATGTATCTGAAGGCGACCTCTaGCTTCTGCTGGGGTTGCAGGCATCTACCACCATG | + |
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Preference number: 3 (lower is better) Translates to: SIPLNYVSEGDL*LLLGLQASTTM Trigger: CATGGTGGTAGATGCCTGCAACCCCAGCAGAAGTCAGAGGTCGCCTTCAGATACATAATTAAGTGGGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR CCA 72 bp | AGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTaGCAGTGTCCATCTGGATCATTCTTTAATCACAAA | + |
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Preference number: 3 (lower is better) Translates to: SPSIHWATSSTP*QCPSGSFFNHK Trigger: TTTGTGATTAAAGAATGATCCAGATGGACACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR-3UTR CAA 90 bp | GGGCTACATCCTCGACTCCTTGGCAGTGTCCATCTGGATCATTCTTTAATCACAATAGCGAAGTCACTTTaGCCTTCTCTACTCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GLHPRLLGSVHLDHSLITIAKSL*PSLLQR Trigger: TCTCTGGAGTAGAGAAGGCAAAAGTGACTTCGCTAT...TGTGATTAAAGAATGATCCAGATGGACACTGCCAAGGAGTCGAGGATGTAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR GCA 72 bp | TTTTTACAAAGCAGTAAAGTATCATATCAAAGGAGCTaGCAAAGGAGGGGCCTAGAGGAGCATTTACAAATC | + |
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Preference number: 3 (lower is better) Translates to: FLQSSKVSYQRS*QRRGLEEHLQI Trigger: GATTTGTAAATGCTCCTCTAGGCCCCTCCTTTGGCAGCTCCTTTGATATGATACTTTACTGCTTTGTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| 3UTR TCA 72 bp | GGGACTGAGGAAAAGGGACTTTACCACCTAATTCTTTaGAACAACAACAATAACAACAACAACAACAATAAC | + |
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Preference number: 3 (lower is better) Translates to: GTEEKGLYHLIL*NNNNNNNNNNN Trigger: GTTATTGTTGTTGTTGTTGTTATTGTTGTTGTTTCAAAGAATTAGGTGGTAAAGTCCCTTTTCCTCAGTCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| CDS-3UTR CCA 90 bp | CCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGGGACTCGTCCGTGCTaGCGGGGATCACGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSVGGRPSVQIPALLYGAGTRPC*RGSRGS Trigger: GCTGCCCCGTGATCCCCGCCAGCACGGACGAGTCCC...GGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR TCA 90 bp | CCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTGAACAGTGGCAACGGATCACGGGGCAGCTaGCTGAGGAAGGGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PCSPVWGRRPRRSLNSGNGSRGS*LRKGWK Trigger: CTTCCAGCCCTTCCTCAGTCAGCTGCCCCGTGATCC...GTTGCCACTGTTCAGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | ACCAGGAACCAAGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTGGCAGTGGGACTCGTCCGTGCTaGCGGGGATCACGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TRNQAPPSTGLHPRLLGSGTRPC*RGSRGS Trigger: GCTGCCCCGTGATCCCCGCCAGCACGGACGAGTCCC...ACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTTCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| CDS-3UTR GCA 90 bp | CCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTGAACAGTGGCAACCGGTCTCCACGGACATaGACTGGCAGCAGTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PCSPVWGRRPRRSLNSGNRSPRT*TGSSGR Trigger: TCTTCCACTGCTGCCAGTGCATGTCCGTGGAGACCG...GTTGCCACTGTTCAGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR GCA 90 bp | CCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTTGTACGAGCTGCGCATaGTCCGTGACCAGCTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: PLCKSLLSCMGPQASEVPCTSCA*SVTSCR Trigger: TCGGCAGCTGGTCACGGAGCATGCGCAGCTCGTACA...AGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGATGACCTGTACGAGCTaGGCATGCTCCGTGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: EGGPLCKSLLSCMGPQASMTCTS*ACSVTS Trigger: GCTGGTCACGGAGCATGCGCAGCTCGTACAGGTCAT...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGCGTTGGCCACCATCTTaGCCACAAGCGTCTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: EGGPLCKSLLSCMGPQASRWPPS*PQASSR Trigger: CCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACG...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGATCTCTTGCAACAGTaGGTGCAGCGCTGCGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: EGGPLCKSLLSCMGPQASDLLQQ*VQRCVG Trigger: TCCGACGCAGCGCTGCACCCACTGTTGCAAGAGATC...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR TCA 90 bp | CCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTGAACAGTGGCAACTCCGTAGTGGTACCCTaGGGCCTTGTCCCCACATAT | + |
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Preference number: 4 (lower is better) Translates to: PCSPVWGRRPRRSLNSGNSVVVP*GLVPTY Trigger: ATATGTGGGGACAAGGCCTCAGGGTACCACTACGGA...GTTGCCACTGTTCAGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR TCA 90 bp | CAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCGCTGCGCATGCTCCGTaGCCAGCTGCCGAAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QKGCGESPHYLRSALFIPAAHAP*PAAEGP Trigger: TGGACCTTCGGCAGCTGGTCACGGAGCATGCGCAGC...GGGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR GCA 90 bp | CCCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGGTCTCCACGGACATaGACTGGCAGCAGTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PKRRREALCANPCSPVWGRSPRT*TGSSGR Trigger: TCTTCCACTGCTGCCAGTGCATGTCCGTGGAGACCG...GCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR GCA 90 bp | CCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCATGACCTGTACGAGCTaGGCATGCTCCGTGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSVGGRPSVQIPALLYGAMTCTS*ACSVTS Trigger: GCTGGTCACGGAGCATGCGCAGCTCGTACAGGTCAT...GGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | CCCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGTTGGCCACCATCTTaGCCACAAGCGTCTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PKRRREALCANPCSPVWGRWPPS*PQASSR Trigger: CCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACG...GCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGTGGTTGCTCTGCAGGTaGAGCTTAAGCACGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: EGGPLCKSLLSCMGPQASWLLCR*SLSTCT Trigger: TGTGCACGTGCTTAAGCTCCACCTGCAGAGCAACCA...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | CGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGAAGGTGTCATCTGGATaGTTGCTCTGCAGGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RRREALCANPCSPVWGRRKVSSG*LLCRWS Trigger: GCTCCACCTGCAGAGCAACCATCCAGATGACACCTT...CCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR TCA 90 bp | CGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCAAACTTGGGTTCCATaGTGTCACAGAACGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RRREALCANPCSPVWGRRQTWVP*CHRTAS Trigger: GGAAGCCGTTCTGTGACATCATGGAACCCAAGTTTG...CCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR TCA 90 bp | ACCAGACTGGGGACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGAGCTGCGCATGCTCCGTaGCCAGCTGCCGAAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TRLGTAVVCHCLNPISLRAAHAP*PAAEGP Trigger: TGGACCTTCGGCAGCTGGTCACGGAGCATGCGCAGC...TCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGTCCCCAGTCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR GCA 90 bp | AGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCATCTGGATGGTTGCTCTaGAGGTGGAGCTTAAGCACG | + |
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Preference number: 4 (lower is better) Translates to: SVGGRPSVQIPALLYGAASGWLL*RWSLST Trigger: CGTGCTTAAGCTCCACCTGCAGAGCAACCATCCAGA...TGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | AACGTAGAGTGCTGTGCATTGATTAACATTGGGCCGGTTAAGACCAGACTGGGGGGGACTCGTCCGTGCTaGCGGGGATCACGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NVECCALINIGPVKTRLGGTRPC*RGSRGS Trigger: GCTGCCCCGTGATCCCCGCCAGCACGGACGAGTCCC...CCCCAGTCTGGTCTTAACCGGCCCAATGTTAATCAATGCACAGCACTCTACGTT 59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | CCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCTGGTTGCTCTGCAGGTaGAGCTTAAGCACGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: PSVGGRPSVQIPALLYGAWLLCR*SLSTCT Trigger: TGTGCACGTGCTTAAGCTCCACCTGCAGAGCAACCA...GGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | CCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCAAGGTGTCATCTGGATaGTTGCTCTGCAGGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PSVGGRPSVQIPALLYGAKVSSG*LLCRWS Trigger: GCTCCACCTGCAGAGCAACCATCCAGATGACACCTT...GGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | CAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCGATCTCTTGCAACAGTaGGTGCAGCGCTGCGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: QKGCGESPHYLRSALFIPDLLQQ*VQRCVG Trigger: TCCGACGCAGCGCTGCACCCACTGTTGCAAGAGATC...GGGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR TCA 90 bp | CTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCGGATCACGGGGCAGCTaGCTGAGGAAGGGCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LRSAHSERMWGEPALPTLGSRGS*LRKGWK Trigger: CTTCCAGCCCTTCCTCAGTCAGCTGCCCCGTGATCC...GAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR TCA 90 bp | ACCAGGAACCAAGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTGGCAGTTCCGTAGTGGTACCCTaGGGCCTTGTCCCCACATAT | + |
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Preference number: 4 (lower is better) Translates to: TRNQAPPSTGLHPRLLGSSVVVP*GLVPTY Trigger: ATATGTGGGGACAAGGCCTCAGGGTACCACTACGGA...ACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTTCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| CDS-3UTR TCA 90 bp | CCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTTCTTGCCCAGAGATTTaGGGTCTGCAGTTTCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLCKSLLSCMGPQASEVPSCPEI*GLQFPN Trigger: ATTCGGAAACTGCAGACCTCAAATCTCTGGGCAAGA...AGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | AACCAAGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTGGCAGTGTCCATATGACCTGTACGAGCTaGGCATGCTCCGTGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQAPPSTGLHPRLLGSVHMTCTS*ACSVTS Trigger: GCTGGTCACGGAGCATGCGCAGCTCGTACAGGTCAT...ATGGACACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCGGGAGAGAGGACAGATaGGGCTCTCTGTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SERMWGEPALPTLSPLHPGREDR*GSLCPP Trigger: TGGTGGACACAGAGAGCCCCATCTGTCCTCTCTCCC...GGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGAGCTCTCCTCACCGATaGACTGAGAAATCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGGPLCKSLLSCMGPQASSSPHR*TEKSLE Trigger: TTCAAGAGATTTCTCAGTCCATCGGTGAGGAGAGCT...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCATGCACTGGCAGCAGTaGAAGAATCGGACCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKGCGESPHYLRSALFIPMHWQQ*KNRTSA Trigger: GGCAGAGGTCCGATTCTTCCACTGCTGCCAGTGCAT...GGGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGCAAGTTTGCAAAGCCTaGGATAGCCTTGGCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: EGGPLCKSLLSCMGPQASQVCKA*DSLGKF Trigger: GAATTTGCCAAGGCTATCCCAGGCTTTGCAAACTTG...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR TCA 90 bp | AGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCATCTCCATGTCATGTATaGCAAAAGGCGGGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGGRPSVQIPALLYGAASPCHV*QKAGCC Trigger: GCAACAACCCGCCTTTTGTCATACATGACATGGAGA...TGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGATCACCCCCATTTGCTGCGCATGCTCCGTaGCCAGCTGCCGAAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAVVCHCLNPISLRSPPFAAHAP*PAAEGP Trigger: TGGACCTTCGGCAGCTGGTCACGGAGCATGCGCAGC...AAATGGGGGTGATCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | CATGTCCATAAATCGGCACCAGGAACCAAGCCCCTCCATCCACTGGGCTACATCCGGTCTCCACGGACATaGACTGGCAGCAGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVHKSAPGTKPLHPLGYIRSPRT*TGSSGR Trigger: TCTTCCACTGCTGCCAGTGCATGTCCGTGGAGACCG...GATGTAGCCCAGTGGATGGAGGGGCTTGGTTCCTGGTGCCGATTTATGGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTGGATGAAATCACACCCTCGTCTCTTGTTCTCCAAGGCGACCAGCTCCTGTACGAGCTGCGCATaGTCCGTGACCAGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RSWMKSHPRLLFSKATSSCTSCA*SVTSCR Trigger: TCGGCAGCTGGTCACGGAGCATGCGCAGCTCGTACA...GGAGCTGGTCGCCTTGGAGAACAAGAGACGAGGGTGTGATTTCATCCAGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR CCA 90 bp | CGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGAGCTCTCCTCACCGATaGACTGAGAAATCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRREALCANPCSPVWGRRSSPHR*TEKSLE Trigger: TTCAAGAGATTTCTCAGTCCATCGGTGAGGAGAGCT...CCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGATCACCCCCATTTGGATCACGGGGCAGCTaGCTGAGGAAGGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAVVCHCLNPISLRSPPFGSRGS*LRKGWK Trigger: CTTCCAGCCCTTCCTCAGTCAGCTGCCCCGTGATCC...AAATGGGGGTGATCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCTCTGGATGGTTGCTCTaGAGGTGGAGCTTAAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SERMWGEPALPTLSPLHPSGWLL*RWSLST Trigger: CGTGCTTAAGCTCCACCTGCAGAGCAACCATCCAGA...GGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCCGTTGGCCACCATCTTaGCCACAAGCGTCTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSAHSERMWGEPALPTLRWPPS*PQASSR Trigger: CCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACG...GAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | AACCAAGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTGGCAGTGTCCATTGGTTGCTCTGCAGGTaGAGCTTAAGCACGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NQAPPSTGLHPRLLGSVHWLLCR*SLSTCT Trigger: TGTGCACGTGCTTAAGCTCCACCTGCAGAGCAACCA...ATGGACACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCAAGGTGTCATCTGGATaGTTGCTCTGCAGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SERMWGEPALPTLSPLHPKVSSG*LLCRWS Trigger: GCTCCACCTGCAGAGCAACCATCCAGATGACACCTT...GGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTTTTTTGAAGGAGCTTTaGGAAGAGGAAGGTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLCKSLLSCMGPQASEVPFLKEL*EEEGVI Trigger: GATGACACCTTCCTCTTCCCAAAGCTCCTTCAAAAA...AGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGACTGGGGACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGAGATCTCTTGCAACAGTaGGTGCAGCGCTGCGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTAVVCHCLNPISLRDLLQQ*VQRCVG Trigger: TCCGACGCAGCGCTGCACCCACTGTTGCAAGAGATC...TCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGTCCCCAGTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCTCTCCATGTCATGTATaGCAAAAGGCGGGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKGCGESPHYLRSALFIPSPCHV*QKAGCC Trigger: GCAACAACCCGCCTTTTGTCATACATGACATGGAGA...GGGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | AACGTAGAGTGCTGTGCATTGATTAACATTGGGCCGGTTAAGACCAGACTGGGGTGTACGAGCTGCGCATaGTCCGTGACCAGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NVECCALINIGPVKTRLGCTSCA*SVTSCR Trigger: TCGGCAGCTGGTCACGGAGCATGCGCAGCTCGTACA...CCCCAGTCTGGTCTTAACCGGCCCAATGTTAATCAATGCACAGCACTCTACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTGAACAGTGGCAACTGCTTTTTCAGATCTTaGCATTCTTCCAAAGCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PCSPVWGRRPRRSLNSGNCFFRS*HSSKAN Trigger: ATTCGCTTTGGAAGAATGCCAAGATCTGAAAAAGCA...GTTGCCACTGTTCAGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | CGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGTTTAGCAAGGTGACTTaGTCGTTCAAGTCCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRREALCANPCSPVWGRRFSKVT*SFKSKF Trigger: AAACTTGGACTTGAACGACCAAGTCACCTTGCTAAA...CCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCATTTTTGAAGGAGCTTTaGGAAGAGGAAGGTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVGGRPSVQIPALLYGAAFLKEL*EEEGVI Trigger: GATGACACCTTCCTCTTCCCAAAGCTCCTTCAAAAA...TGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTAGTCTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTAATGCACTGGCAGCAGTaGAAGAATCGGACCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGSLRSAHSERMWGEPALMHWQQ*KNRTSA Trigger: GGCAGAGGTCCGATTCTTCCACTGCTGCCAGTGCAT...TAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAGACTACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | CCCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCTTTAGCAAGGTGACTTaGTCGTTCAAGTCCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKRRREALCANPCSPVWGFSKVT*SFKSKF Trigger: AAACTTGGACTTGAACGACCAAGTCACCTTGCTAAA...GCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| 3UTR CAA 72 bp | GACCAGCTCCCTTCTGCCTGGATAGCGAAGTCACTTTaGCCTTCTCTACTCCAGAGAGATAGAGAGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQLPSAWIAKSL*PSLLQRDRESA Trigger: TGCGCTCTCTCTATCTCTCTGGAGTAGAGAAGGCAAAAGTGACTTCGCTATCCAGGCAGAAGGGAGCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| 3UTR CAA 72 bp | ACAAACAGAAGCTGGATGAAATCACACCCTCGTCTCTaGTTCTCCAAGGCGACCAGCTCCCTTCTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNRSWMKSHPRL*FSKATSSLLPG Trigger: TCCAGGCAGAAGGGAGCTGGTCGCCTTGGAGAACAAGAGACGAGGGTGTGATTTCATCCAGCTTCTGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCATGCTTTTTCAGATCTTaGCATTCTTCCAAAGCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVGGRPSVQIPALLYGAACFFRS*HSSKAN Trigger: ATTCGCTTTGGAAGAATGCCAAGATCTGAAAAAGCA...TGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | AACGTAGAGTGCTGTGCATTGATTAACATTGGGCCGGTTAAGACCAGACTGGGGATGCACTGGCAGCAGTaGAAGAATCGGACCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVECCALINIGPVKTRLGMHWQQ*KNRTSA Trigger: GGCAGAGGTCCGATTCTTCCACTGCTGCCAGTGCAT...CCCCAGTCTGGTCTTAACCGGCCCAATGTTAATCAATGCACAGCACTCTACGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCTTTTTGAAGGAGCTTTaGGAAGAGGAAGGTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QKGCGESPHYLRSALFIPFLKEL*EEEGVI Trigger: GATGACACCTTCCTCTTCCCAAAGCTCCTTCAAAAA...GGGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCTCTTGCCCAGAGATTTaGGGTCTGCAGTTTCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSAHSERMWGEPALPTLSCPEI*GLQFPN Trigger: ATTCGGAAACTGCAGACCTCAAATCTCTGGGCAAGA...GAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGACTGGGGACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGATCTCCATGTCATGTATaGCAAAAGGCGGGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTAVVCHCLNPISLRSPCHV*QKAGCC Trigger: GCAACAACCCGCCTTTTGTCATACATGACATGGAGA...TCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGTCCCCAGTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGTAGTCTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACAAACTTGGGTTCCATaGTGTCACAGAACGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGSLRSAHSERMWGEPALQTWVP*CHRTAS Trigger: GGAAGCCGTTCTGTGACATCATGGAACCCAAGTTTG...TAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAGACTACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCTCTTCTTCTGAATCTTaGAGCTCCGATCACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SERMWGEPALPTLSPLHPSSSES*SSDHTC Trigger: ACAAGTGTGATCGGAGCTGCAAGATTCAGAAGAAGA...GGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGAACCAAGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTGGCAGTTTTAGCAAGGTGACTTaGTCGTTCAAGTCCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRNQAPPSTGLHPRLLGSFSKVT*SFKSKF Trigger: AAACTTGGACTTGAACGACCAAGTCACCTTGCTAAA...ACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTTCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCTCTCCTCACCGATaGACTGAGAAATCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSAHSERMWGEPALPTLSSPHR*TEKSLE Trigger: TTCAAGAGATTTCTCAGTCCATCGGTGAGGAGAGCT...GAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGACTGGGGACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGACAAGTTTGCAAAGCCTaGGATAGCCTTGGCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTAVVCHCLNPISLRQVCKA*DSLGKF Trigger: GAATTTGCCAAGGCTATCCCAGGCTTTGCAAACTTG...TCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGTCCCCAGTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGATCACCCCCATTTTCTTGCCCAGAGATTTaGGGTCTGCAGTTTCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAVVCHCLNPISLRSPPFSCPEI*GLQFPN Trigger: ATTCGGAAACTGCAGACCTCAAATCTCTGGGCAAGA...AAATGGGGGTGATCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGACTGGGGACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGACAGAGATTTGAGGTCTaGAGTTTCCGAATCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLGTAVVCHCLNPISLRQRFEV*SFRIFQ Trigger: CTGAAAGATTCGGAAACTGCAGACCTCAAATCTCTG...TCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGTCCCCAGTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTAGTCTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTAGTTCAAGTCCAAGTTTaGAAAGCCTGGGATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSLRSAHSERMWGEPALVQVQV*KAWDSL Trigger: AAGGCTATCCCAGGCTTTGCAAACTTGGACTTGAAC...TAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAGACTACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTAGTCTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTATCTTCTTCTGAATCTTaGAGCTCCGATCACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSLRSAHSERMWGEPALSSSES*SSDHTC Trigger: ACAAGTGTGATCGGAGCTGCAAGATTCAGAAGAAGA...TAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAGACTACCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTAGTCTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACAGAGATTTGAGGTCTaGAGTTTCCGAATCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSLRSAHSERMWGEPALQRFEV*SFRIFQ Trigger: CTGAAAGATTCGGAAACTGCAGACCTCAAATCTCTG...TAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAGACTACCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR GCA 90 bp | AACGTAGAGTGCTGTGCATTGATTAACATTGGGCCGGTTAAGACCAGACTGGGGGTTCAAGTCCAAGTTTaGAAAGCCTGGGATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NVECCALINIGPVKTRLGVQVQV*KAWDSL Trigger: AAGGCTATCCCAGGCTTTGCAAACTTGGACTTGAAC...CCCCAGTCTGGTCTTAACCGGCCCAATGTTAATCAATGCACAGCACTCTACGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTACAAAGCAGTAAAGTATCATATCAAAGGAGCTGCCAAAGGAGGGGCCTAGGGAGAGAGGACAGATaGGGCTCTCTGTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FLQSSKVSYQRSCQRRGLGREDR*GSLCPP Trigger: TGGTGGACACAGAGAGCCCCATCTGTCCTCTCTCCC...TAGGCCCCTCCTTTGGCAGCTCCTTTGATATGATACTTTACTGCTTTGTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGATCACCCCCATTTTCTTCTTCTGAATCTTaGAGCTCCGATCACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAVVCHCLNPISLRSPPFSSSES*SSDHTC Trigger: ACAAGTGTGATCGGAGCTGCAAGATTCAGAAGAAGA...AAATGGGGGTGATCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTACATCCTCGACTCCTTGGCAGTGTCCATCTGGATCATTCTTTAATCACACAAGTTTGCAAAGCCTaGGATAGCCTTGGCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLHPRLLGSVHLDHSLITQVCKA*DSLGKF Trigger: GAATTTGCCAAGGCTATCCCAGGCTTTGCAAACTTG...TGTGATTAAAGAATGATCCAGATGGACACTGCCAAGGAGTCGAGGATGTAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| CDS-3UTR GCA 90 bp | TTTTTACAAAGCAGTAAAGTATCATATCAAAGGAGCTGCCAAAGGAGGGGCCTATCTGGATGGTTGCTCTaGAGGTGGAGCTTAAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: FLQSSKVSYQRSCQRRGLSGWLL*RWSLST Trigger: CGTGCTTAAGCTCCACCTGCAGAGCAACCATCCAGA...TAGGCCCCTCCTTTGGCAGCTCCTTTGATATGATACTTTACTGCTTTGTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTCGAATGTTCTCAGAAGCCAGCTCTCTTTCTTAGAGCCAGGAAACTCAAGGTTCAAGTCCAAGTTTaGAAAGCCTGGGATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILECSQKPALFLRARKLKVQVQV*KAWDSL Trigger: AAGGCTATCCCAGGCTTTGCAAACTTGGACTTGAAC...CTTGAGTTTCCTGGCTCTAAGAAAGAGAGCTGGCTTCTGAGAACATTCGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CCA 90 bp | ACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGATCACCCCCATTTTGCTTTTTCAGATCTTaGCATTCTTCCAAAGCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAVVCHCLNPISLRSPPFCFFRS*HSSKAN Trigger: ATTCGCTTTGGAAGAATGCCAAGATCTGAAAAAGCA...AAATGGGGGTGATCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| 3UTR CAA 72 bp | TTTGCCACATTTAAATGGCTAACCTTGGGCCACACCTaGACTTGTAGGTTTTCAAAGGTTAAAAAGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FATFKWLTLGHT*TCRFSKVKKCR Trigger: TCTGCACTTTTTAACCTTTGAAAACCTACAAGTCAAGGTGTGGCCCAAGGTTAGCCATTTAAATGTGGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCACCGTTGGCCACCATCTaGGCCACAAGCGTCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVGGRPSVQIPALLYGAAPLATI*ATSVFS Trigger: CGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGG...TGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTGAACAGTGGCAACGTCTCTGTAGATCTCTaGCAACAGTGGGTGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PCSPVWGRRPRRSLNSGNVSVDL*QQWVQR Trigger: GCGCTGCACCCACTGTTGCAAGAGATCTACAGAGAC...GTTGCCACTGTTCAGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGTGTCATCTGGATGGTaGCTCTGCAGGTGGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: EGGPLCKSLLSCMGPQASVSSGW*LCRWSL Trigger: TAAGCTCCACCTGCAGAGCAACCATCCAGATGACAC...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCACAGCTCCGATCACACTaGTCGTACACCAGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVGGRPSVQIPALLYGAAQLRSH*SYTSFS Trigger: GCTGAAGCTGGTGTACGACAAGTGTGATCGGAGCTG...TGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCAGCTCCGATCACACTaGTCGTACACCAGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKRRREALCANPCSPVWGQLRSH*SYTSFS Trigger: GCTGAAGCTGGTGTACGACAAGTGTGATCGGAGCTG...GCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGCTTCGTGGATTCTCTaGCCCAGAGATTTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGGPLCKSLLSCMGPQASASWIL*PRDLRS Trigger: AGACCTCAAATCTCTGGGCAAGAGAATCCACGAAGC...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGACCCGGGCCTTGACCTaGTTCATGTTGAAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGGPLCKSLLSCMGPQASTRALT*FMLKFF Trigger: GAAGAACTTCAACATGAACAAGGTCAAGGCCCGGGT...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGATCAGCATCCCGTCTTaGTTCATCAAGGAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGGPLCKSLLSCMGPQASISIPS*FIKEDS Trigger: GCTGTCCTCCTTGATGAACAAAGACGGGATGCTGAT...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTGAACAGTGGCAACATCAGCATCCCGTCTTaGTTCATCAAGGAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PCSPVWGRRPRRSLNSGNISIPS*FIKEDS Trigger: GCTGTCCTCCTTGATGAACAAAGACGGGATGCTGAT...GTTGCCACTGTTCAGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGTCTCTGTAGATCTCTaGCAACAGTGGGTGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSVGGRPSVQIPALLYGAVSVDL*QQWVQR Trigger: GCGCTGCACCCACTGTTGCAAGAGATCTACAGAGAC...GGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS GCA 90 bp | GGTCTCCACGGACATGCACTGGCAGCAGTGGAAGAATCGGACCTCTaGCTCTTTGTCTTCGACGCCGTTGGCCACCATCTTGGCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLHGHALAAVEESDL*LFVFDAVGHHLGHK Trigger: CTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATTCTTCCACTGCTGCCAGTGCATGTCCGTGGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | CGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCTCTTGCCCAGAGATTaGAGGTCTGCAGTTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRREALCANPCSPVWGRRLLPRD*RSAVSE Trigger: TTCGGAAACTGCAGACCTCAAATCTCTGGGCAAGAG...CCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | AACCAAGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTGGCAGTGTCCATCCGTTGGCCACCATCTaGGCCACAAGCGTCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NQAPPSTGLHPRLLGSVHPLATI*ATSVFS Trigger: CGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGG...ATGGACACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| CDS-3UTR CAA 90 bp | TCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCCGTTGGCCACCATCTaGGCCACAAGCGTCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SERMWGEPALPTLSPLHPPLATI*ATSVFS Trigger: CGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGG...GGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTATCAGCATCCCGTCTTaGTTCATCAAGGAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLCKSLLSCMGPQASEVPISIPS*FIKEDS Trigger: GCTGTCCTCCTTGATGAACAAAGACGGGATGCTGAT...AGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | AGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGTGTCATCTGGATGGTaGCTCTGCAGGTGGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SVGGRPSVQIPALLYGAAVSSGW*LCRWSL Trigger: TAAGCTCCACCTGCAGAGCAACCATCCAGATGACAC...TGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | AGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAACCCGGGCCTTGACCTaGTTCATGTTGAAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVGGRPSVQIPALLYGAATRALT*FMLKFF Trigger: GAAGAACTTCAACATGAACAAGGTCAAGGCCCGGGT...TGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CCA 90 bp | AGCAGTGGAAGAATCGGACCTCTGCCTCTTTGTCTTCGACGCCGTTaGCCACCATCTTGGCCACAAGCGTCTTCTCGGCCATACACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGRIGPLPLCLRRR*PPSWPQASSRPYTR Trigger: CCTTGTGTATGGCCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATTCTTCCACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CCA 90 bp | ATCGGACCTCTGCCTCTTTGTCTTCGACGCCGTTGGCCACCATCTTaGCCACAAGCGTCTTCTCGGCCATACACAAGGTCTCCATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IGPLPLCLRRRWPPS*PQASSRPYTRSPCH Trigger: ATGACATGGAGACCTTGTGTATGGCCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | CCCAAGCGTAGGAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCTTCTTCCAAAGCGAATaGCATTGTGTGACATCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PKRRREALCANPCSPVWGFFQSE*HCVTSR Trigger: TCGGGATGTCACACAATGCAATTCGCTTTGGAAGAA...GCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTCCTACGCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | CCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGGAGGTCCCTGAACAGTGGCAACTTGCTTTTTCAGATCTaGGCATTCTTCCAAAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PCSPVWGRRPRRSLNSGNLLFQI*AFFQSE Trigger: TTCGCTTTGGAAGAATGCCAAGATCTGAAAAAGCAA...GTTGCCACTGTTCAGGGACCTCCGAGGCCTGCGGCCCCATACAGGAGAGCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCAGTATGACCCGGGCCTaGACCTTGTTCATGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QKGCGESPHYLRSALFIPSMTRA*TLFMLK Trigger: CTTCAACATGAACAAGGTCAAGGCCCGGGTCATACT...GGGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | GAGGGAGGCCCTCTGTGCAAATCCCTGCTCTCCTGTATGGGGCCGCAGGCCTCGTTTCTGCTTTCAGTTTaGCTTTTTCAGATCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EGGPLCKSLLSCMGPQASFLLSV*LFQILA Trigger: TGCCAAGATCTGAAAAAGCAAAACTGAAAGCAGAAA...CGAGGCCTGCGGCCCCATACAGGAGAGCAGGGATTTGCACAGAGGGCCTCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCTCTTGCCCAGAGATTaGAGGTCTGCAGTTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SERMWGEPALPTLSPLHPLLPRD*RSAVSE Trigger: TTCGGAAACTGCAGACCTCAAATCTCTGGGCAAGAG...GGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTAGTCTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACAGCTCCGATCACACTaGTCGTACACCAGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGSLRSAHSERMWGEPALQLRSH*SYTSFS Trigger: GCTGAAGCTGGTGTACGACAAGTGTGATCGGAGCTG...TAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAGACTACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCCATAGCGAAGTCAAACTaGGGTTCCATGATGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QKGCGESPHYLRSALFIPIAKSN*GSMMSQ Trigger: CTGTGACATCATGGAACCCAAGTTTGACTTCGCTAT...GGGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGACTGGGGACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGAGTGTCATCTGGATGGTaGCTCTGCAGGTGGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TRLGTAVVCHCLNPISLRVSSGW*LCRWSL Trigger: TAAGCTCCACCTGCAGAGCAACCATCCAGATGACAC...TCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGTCCCCAGTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CCA 90 bp | AGCTTTGGGAAGAGGAAGGTGTCATCTGGATGGTTGCTCTGCAGGTaGAGCTTAAGCACGTGCACAATCCCCTCCTGCAACTTCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SFGKRKVSSGWLLCR*SLSTCTIPSCNFSM Trigger: CATTGAGAAGTTGCAGGAGGGGATTGTGCACGTGCTTAAGCTCCACCTGCAGAGCAACCATCCAGATGACACCTTCCTCTTCCCAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCGCTTCGTGGATTCTCTaGCCCAGAGATTTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSAHSERMWGEPALPTLASWIL*PRDLRS Trigger: AGACCTCAAATCTCTGGGCAAGAGAATCCACGAAGC...GAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCACCCGGGCCTTGACCTaGTTCATGTTGAAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSAHSERMWGEPALPTLTRALT*FMLKFF Trigger: GAAGAACTTCAACATGAACAAGGTCAAGGCCCGGGT...GAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCAGCCCTCTTCATCCCATAGCGAAGTCAAACTaGGGTTCCATGATGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SERMWGEPALPTLSPLHPIAKSN*GSMMSQ Trigger: CTGTGACATCATGGAACCCAAGTTTGACTTCGCTAT...GGGATGAAGAGGGCTGAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | AACGTAGAGTGCTGTGCATTGATTAACATTGGGCCGGTTAAGACCAGACTGGGGGTCTCTGTAGATCTCTaGCAACAGTGGGTGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NVECCALINIGPVKTRLGVSVDL*QQWVQR Trigger: GCGCTGCACCCACTGTTGCAAGAGATCTACAGAGAC...CCCCAGTCTGGTCTTAACCGGCCCAATGTTAATCAATGCACAGCACTCTACGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGTAGTCTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACTCTTGCCCAGAGATTaGAGGTCTGCAGTTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGSLRSAHSERMWGEPALLLPRD*RSAVSE Trigger: TTCGGAAACTGCAGACCTCAAATCTCTGGGCAAGAG...TAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAGACTACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
||
| CDS-3UTR CAA 90 bp | AACCAAGCCCCTCCATCCACTGGGCTACATCCTCGACTCCTTGGCAGTGTCCATTTGCTTTTTCAGATCTaGGCATTCTTCCAAAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: NQAPPSTGLHPRLLGSVHLLFQI*AFFQSE Trigger: TTCGCTTTGGAAGAATGCCAAGATCTGAAAAAGCAA...ATGGACACTGCCAAGGAGTCGAGGATGTAGCCCAGTGGATGGAGGGGCTTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
||
| CDS-3UTR CAA 90 bp | AACGTAGAGTGCTGTGCATTGATTAACATTGGGCCGGTTAAGACCAGACTGGGGAGTATGACCCGGGCCTaGACCTTGTTCATGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: NVECCALINIGPVKTRLGSMTRA*TLFMLK Trigger: CTTCAACATGAACAAGGTCAAGGCCCGGGTCATACT...CCCCAGTCTGGTCTTAACCGGCCCAATGTTAATCAATGCACAGCACTCTACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CCA 90 bp | ATCGTGAAGATGGCTTCATACACACCGTACTTTAGCAAGGTGACTTaGTCGTTCAAGTCCAAGTTTGCAAAGCCTGGGATAGCCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: IVKMASYTPYFSKVT*SFKSKFAKPGIALA Trigger: TGCCAAGGCTATCCCAGGCTTTGCAAACTTGGACTTGAACGACCAAGTCACCTTGCTAAAGTACGGTGTGTATGAAGCCATCTTCACGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS GCA 90 bp | CTTCAGGTAGGCTTCGTGGATTCTCTTGCCCAGAGATTTGAGGTCTaGAGTTTCCGAATCTTTCAGGTCGTGTTCACAGGTAAGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: LQVGFVDSLAQRFEV*SFRIFQVVFTGKNF Trigger: GAAATTCTTACCTGTGAACACGACCTGAAAGATTCGGAAACTGCAGACCTCAAATCTCTGGGCAAGAGAATCCACGAAGCCTACCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | GGGCTACATCCTCGACTCCTTGGCAGTGTCCATCTGGATCATTCTTTAATCACATTCTTCCAAAGCGAATaGCATTGTGTGACATCCCGA | + |
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Preference number: 5 (lower is better) Translates to: GLHPRLLGSVHLDHSLITFFQSE*HCVTSR Trigger: TCGGGATGTCACACAATGCAATTCGCTTTGGAAGAA...TGTGATTAAAGAATGATCCAGATGGACACTGCCAAGGAGTCGAGGATGTAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| CDS-3UTR CAA 90 bp | CTTAGAAGTGCCCATTCAGAAAGGATGTGGGGAGAGCCCGCATTACCTACGCTCTTTCTGCTTTCAGTTTaGCTTTTTCAGATCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LRSAHSERMWGEPALPTLFLLSV*LFQILA Trigger: TGCCAAGATCTGAAAAAGCAAAACTGAAAGCAGAAA...GAGCGTAGGTAATGCGGGCTCTCCCCACATCCTTTCTGAATGGGCACTTCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | ATTCTCGAATGTTCTCAGAAGCCAGCTCTCTTTCTTAGAGCCAGGAAACTCAAGAGTATGACCCGGGCCTaGACCTTGTTCATGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: ILECSQKPALFLRARKLKSMTRA*TLFMLK Trigger: CTTCAACATGAACAAGGTCAAGGCCCGGGTCATACT...CTTGAGTTTCCTGGCTCTAAGAAAGAGAGCTGGCTTCTGAGAACATTCGAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | ACTGCCGTTGTCTGTCACTGTCTGAATCCTATTAGCCTCCGATCACCCCCATTTTTGCTTTTTCAGATCTaGGCATTCTTCCAAAGCGAA | + |
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Preference number: 5 (lower is better) Translates to: TAVVCHCLNPISLRSPPFLLFQI*AFFQSE Trigger: TTCGCTTTGGAAGAATGCCAAGATCTGAAAAAGCAA...AAATGGGGGTGATCGGAGGCTAATAGGATTCAGACAGTGACAGACAACGGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | TTTTTACAAAGCAGTAAAGTATCATATCAAAGGAGCTGCCAAAGGAGGGGCCTAGCTTCGTGGATTCTCTaGCCCAGAGATTTGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: FLQSSKVSYQRSCQRRGLASWIL*PRDLRS Trigger: AGACCTCAAATCTCTGGGCAAGAGAATCCACGAAGC...TAGGCCCCTCCTTTGGCAGCTCCTTTGATATGATACTTTACTGCTTTGTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| CDS-3UTR CAA 90 bp | CATCCTCGACTCCTTGGCAGTGTCCATCTGGATCATTCTTTAATCACAAATGATATAGCGAAGTCAAACTaGGGTTCCATGATGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: HPRLLGSVHLDHSLITNDIAKSN*GSMMSQ Trigger: CTGTGACATCATGGAACCCAAGTTTGACTTCGCTAT...ATCATTTGTGATTAAAGAATGATCCAGATGGACACTGCCAAGGAGTCGAGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109422.8 |
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| CDS CCA 90 bp | ACTGGTAGTCTGCAAAACCAAAGCTTCCAGAGCTCTCCTCACCGATaGACTGAGAAATCTCTTGAATGTTTCCCATTTCTTGTAAGAATT | + |
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Preference number: 5 (lower is better) Translates to: TGSLQNQSFQSSPHR*TEKSLECFPFLVRI Trigger: AATTCTTACAAGAAATGGGAAACATTCAAGAGATTTCTCAGTCCATCGGTGAGGAGAGCTCTGGAAGCTTTGGTTTTGCAGACTACCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS-3UTR CAA 90 bp | ATTCTCGAATGTTCTCAGAAGCCAGCTCTCTTTCTTAGAGCCAGGAAACTCAAGTTTCTGCTTTCAGTTTaGCTTTTTCAGATCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: ILECSQKPALFLRARKLKFLLSV*LFQILA Trigger: TGCCAAGATCTGAAAAAGCAAAACTGAAAGCAGAAA...CTTGAGTTTCCTGGCTCTAAGAAAGAGAGCTGGCTTCTGAGAACATTCGAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS TCA 72 bp | GGGACTCGTCCGTGCTGGCGGGGATCACGGGGCAGCTaGCTGAGGAAGGGCTGGAAGCTGGAGAGAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GTRPCWRGSRGS*LRKGWKLERGC Trigger: ACACCCTCTCTCCAGCTTCCAGCCCTTCCTCAGTCAGCTGCCCCGTGATCCCCGCCAGCACGGACGAGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 72 bp | AACAGTGGGTGCAGCGCTGCGTCGGACTCGGTCTTCTaGATGACCTGTACGAGCTGCGCATGCTCCGTGACC | + |
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Preference number: 6 (lower is better) Translates to: NSGCSAASDSVF*MTCTSCACSVT Trigger: GGTCACGGAGCATGCGCAGCTCGTACAGGTCATCAAGAAGACCGAGTCCGACGCAGCGCTGCACCCACTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 90 bp | ATCTCTTGCAACAGTGGGTGCAGCGCTGCGTCGGACTCGGTCTTCTaGATGACCTGTACGAGCTGCGCATGCTCCGTGACCAGCTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: ISCNSGCSAASDSVF*MTCTSCACSVTSCR Trigger: TCGGCAGCTGGTCACGGAGCATGCGCAGCTCGTACAGGTCATCAAGAAGACCGAGTCCGACGCAGCGCTGCACCCACTGTTGCAAGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 90 bp | ACGGACATGCACTGGCAGCAGTGGAAGAATCGGACCTCTGCCTCTTaGTCTTCGACGCCGTTGGCCACCATCTTGGCCACAAGCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TDMHWQQWKNRTSAS*SSTPLATILATSVF Trigger: GAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATTCTTCCACTGCTGCCAGTGCATGTCCGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CCA 72 bp | AGAATCGGACCTCTGCCTCTTTGTCTTCGACGCCGTTaGCCACCATCTTGGCCACAAGCGTCTTCTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RIGPLPLCLRRR*PPSWPQASSRP Trigger: TGGCCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 72 bp | AAGAATCGGACCTCTGCCTCTTTGTCTTCGACGCCGTaGGCCACCATCTTGGCCACAAGCGTCTTCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: KNRTSASLSSTP*ATILATSVFSA Trigger: GGCCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 72 bp | CACTGGCAGCAGTGGAAGAATCGGACCTCTGCCTCTTaGTCTTCGACGCCGTTGGCCACCATCTTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: HWQQWKNRTSAS*SSTPLATILAT Trigger: TGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATTCTTCCACTGCTGCCAGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 90 bp | CAGCAGTGGAAGAATCGGACCTCTGCCTCTTTGTCTTCGACGCCGTaGGCCACCATCTTGGCCACAAGCGTCTTCTCGGCCATACACAAG | + |
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Preference number: 6 (lower is better) Translates to: QQWKNRTSASLSSTP*ATILATSVFSAIHK Trigger: CTTGTGTATGGCCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATTCTTCCACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS GCA 72 bp | GGACATGCACTGGCAGCAGTGGAAGAATCGGACCTCTaGCTCTTTGTCTTCGACGCCGTTGGCCACCATCTT | + |
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Preference number: 6 (lower is better) Translates to: GHALAAVEESDL*LFVFDAVGHHL Trigger: AAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATTCTTCCACTGCTGCCAGTGCATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CCA 72 bp | CTGCCTCTTTGTCTTCGACGCCGTTGGCCACCATCTTaGCCACAAGCGTCTTCTCGGCCATACACAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LPLCLRRRWPPS*PQASSRPYTRS Trigger: AGACCTTGTGTATGGCCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 72 bp | TCTGCCTCTTTGTCTTCGACGCCGTTGGCCACCATCTaGGCCACAAGCGTCTTCTCGGCCATACACAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SASLSSTPLATI*ATSVFSAIHKV Trigger: GACCTTGTGTATGGCCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 90 bp | AATCGGACCTCTGCCTCTTTGTCTTCGACGCCGTTGGCCACCATCTaGGCCACAAGCGTCTTCTCGGCCATACACAAGGTCTCCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: NRTSASLSSTPLATI*ATSVFSAIHKVSMS Trigger: TGACATGGAGACCTTGTGTATGGCCGAGAAGACGCTTGTGGCCAAGATGGTGGCCAACGGCGTCGAAGACAAAGAGGCAGAGGTCCGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CAA 72 bp | CTCAGGTTCTTAAGGAACTCGCGTGTGATAAAGCCATaGCCGTACGCGATCAGCATCCCGTCTTTGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LRFLRNSRVIKP*PYAISIPSLFI Trigger: GATGAACAAAGACGGGATGCTGATCGCGTACGGCAATGGCTTTATCACACGCGAGTTCCTTAAGAACCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CCA 72 bp | ATGGCTTCATACACACCGTACTTTAGCAAGGTGACTTaGTCGTTCAAGTCCAAGTTTGCAAAGCCTGGGATA | + |
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Preference number: 6 (lower is better) Translates to: MASYTPYFSKVT*SFKSKFAKPGI Trigger: TATCCCAGGCTTTGCAAACTTGGACTTGAACGACCAAGTCACCTTGCTAAAGTACGGTGTGTATGAAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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| CDS CCA 72 bp | CTGCAAAACCAAAGCTTCCAGAGCTCTCCTCACCGATaGACTGAGAAATCTCTTGAATGTTTCCCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LQNQSFQSSPHR*TEKSLECFPFL Trigger: AAGAAATGGGAAACATTCAAGAGATTTCTCAGTCCATCGGTGAGGAGAGCTCTGGAAGCTTTGGTTTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057979.6 ENSMUST00000109422.8 ENSMUST00000109423.8 |
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