Pregenerated sensors for PPAN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004100Ensembl transcript IDs: ENSMUST00000004203.6, ENSMUST00000214331.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCGGGGCCCAATCTCAGTAAGTCGGACGGCGCTCTGTTGGGCCTaGATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: IRGPISVSRTALCWA*MLPRPATAWGSSVV Trigger: CACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGACTTACTGAGATTGGGCCCCGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| 3UTR CCA 90 bp | ACGGCGCTCTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTaGGGCAGTTCTGTGGTGTTGTGTTCTCCATCTGGCTCCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: TALCWACMLPRPATA*GSSVVLCSPSGSTS Trigger: TGAGGTGGAGCCAGATGGAGAACACAACACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| 3UTR CCA 90 bp | GGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTaGTGTTGTGTTCTCCATCTGGCTCCACCTCACTGTCTGATAGCC | + |
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Preference number: 1 (lower is better) Translates to: GPACCHGRPQPGAVL*CCVLHLAPPHCLIA Trigger: GGCTATCAGACAGTGAGGTGGAGCCAGATGGAGAACACAACACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| 3UTR CAA 90 bp | TGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTGTaGTGTTCTCCATCTGGCTCCACCTCACTGTCTGATAGCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: CMLPRPATAWGSSVV*CSPSGSTSLSDSPT Trigger: TGTGGGGCTATCAGACAGTGAGGTGGAGCCAGATGGAGAACACAACACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| 3UTR CCA 72 bp | CGGGGCCCAATCTCAGTAAGTCGGACGGCGCTCTGTTaGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RGPISVSRTALC*ACMLPRPATAW Trigger: CCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGACTTACTGAGATTGGGCCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| 3UTR CCA 72 bp | TGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTaGGGCAGTTCTGTGGTGTTGTGTTCTCCATCTGGC | + |
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Preference number: 3 (lower is better) Translates to: CWACMLPRPATA*GSSVVLCSPSG Trigger: GCCAGATGGAGAACACAACACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR TCA 90 bp | AAGTCGGACGGCGCTCTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGCCGCTCGGCCTCGCGTaGACACGAACGAGTGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KSDGALLGLHVATAGHSLPLGLA*TRTSAA Trigger: AGCCGCACTCGTTCGTGTTCACGCGAGGCCGAGCGG...CAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGACTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR GCA 90 bp | GTAAGTCGGACGGCGCTCTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCCGTAGGACTCGAGGTTaGGGAGCTGCGCCTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VSRTALCWACMLPRPATARRTRG*GAAPGR Trigger: GCGCCCAGGCGCAGCTCCGCAACCTCGAGTCCTACG...GGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGACTTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR GCA 90 bp | CTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTTCGAGGTTGCGGAGCTaGGCCTGGGCGCGATTGCGC | + |
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Preference number: 4 (lower is better) Translates to: LLGLHVATAGHSLGQFCGSRLRS*AWARLR Trigger: GCGCAATCGCGCCCAGGCGCAGCTCCGCAACCTCGA...ACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| 3UTR CAA 72 bp | CCGGGGCCCAATCTCAGTAAGTCGGACGGCGCTCTGTaGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PGPNLSKSDGAL*GLHVATAGHSL Trigger: CAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGACTTACTGAGATTGGGCCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR GCA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCTCGAGGTTGCGGAGCTaGGCCTGGGCGCGATTGCGC | + |
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Preference number: 4 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPSRLRS*AWARLR Trigger: GCGCAATCGCGCCCAGGCGCAGCTCCGCAACCTCGA...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | CCGGACTGCACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATACGTAGGACTCGAGGTTaGGGAGCTGCGCCTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PDCTGSQAASGPQSGASIRRTRG*GAAPGR Trigger: GCGCCCAGGCGCAGCTCCGCAACCTCGAGTCCTACG...TATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTGCAGTCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCGCGCTCTGTTGGGCCTaGATGTTGCCACGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPALCWA*MLPRPA Trigger: GGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGC...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | CTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTCAGGGGGCCAGCCACTaGCACACAGTCCTTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LLGLHVATAGHSLGQFCGQGASH*HTVLQG Trigger: TCCCTGAAGGACTGTGTGGCAGTGGCTGGCCCCCTG...ACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR TCA 90 bp | CGCTCTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGGCTGCGTGTGCACGTTaGTGGACGGGAACAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RSVGPACCHGRPQPGAVLAACAR*WTGTGS Trigger: AGAACCTGTTCCCGTCCATCAACGTGCACACGCAGC...CAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR GCA 90 bp | CGCTCTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTTAAACTGCTGCTCGTaGATCCGGTGTCGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RSVGPACCHGRPQPGAVLLNCCS*IRCRRR Trigger: CCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAA...CAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR GCA 90 bp | AGTAAGTCGGACGGCGCTCTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCGCCATGAGCTTGATGTaGATGCCCTGGGGGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: SKSDGALLGLHVATAGHSAMSLM*MPWGPK Trigger: CTTCGGCCCCCAGGGCATGCACATCAAGCTCATGGC...GCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGACTTACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR GCA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCACATCCAGGCTGAGCTaGCGGACATTGCGACCCGCT | + |
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Preference number: 4 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPTSRLS*RTLRPA Trigger: AGCGGGTCGCAATGTCCGGCAGCTCAGCCTGGATGT...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | GGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTGTTGTCAAAGTGGGGCCTCCTaGGAGCCGCATCAGCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: GPACCHGRPQPGAVLWCCQSGAS*EPHQLQ Trigger: TTGAAGCTGATGCGGCTCCCAGGAGGCCCCACTTTG...ACAACACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR CCA 90 bp | CGCTCTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGGACGGGAACAGGTTCTaGAACATGGTGGCCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: RSVGPACCHGRPQPGAVLDGNRF*NMVAMS Trigger: GCTCATGGCCACCATGTTCCAGAACCTGTTCCCGTC...CAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR GCA 90 bp | CTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTGGAGGGTGGTTAAACTaGTGCTCGTGCATCCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LLGLHVATAGHSLGQFCGGGWLN*CSCIRC Trigger: ACACCGGATGCACGAGCAGCAGTTTAACCACCCTCC...ACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR CCA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCCAAAGTGGGGCCTCCTaGGAGCCGCATCAGCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPQSGAS*EPHQLQ Trigger: TTGAAGCTGATGCGGCTCCCAGGAGGCCCCACTTTG...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | GCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTGTTGTGTTTGATGTGCATGCCCTaGGGGCCGAAGCTGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: ACMLPRPATAWGSSVVLCLMCMP*GPKLLS Trigger: GCTCAACAGCTTCGGCCCCCAGGGCATGCACATCAA...ACACAACACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR TCA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCTCACCGTGTGCACGTTaGTGGACGGGAACAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPSPCAR*WTGTGS Trigger: AGAACCTGTTCCCGTCCATCAACGTGCACACGGTGA...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | CCGGACTGCACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGCGCTGCAAGTTCTCTaGCTGTTGGTTCTGACGCTG | + |
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Preference number: 4 (lower is better) Translates to: PDCTGSQAASGPQSGASIALQVL*LLVLTL Trigger: CAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGC...TATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTGCAGTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | TTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTGTTGTGTTCTCCATCTTCTGGAACGTCAAAGTaGGGCCTCCTGGGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LPRPATAWGSSVVLCSPSSGTSK*GLLGAA Trigger: TGCGGCTCCCAGGAGGCCCCACTTTGACGTTCCAGA...AGATGGAGAACACAACACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS-3UTR GCA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCTGGATCTTAATGAGCTaGAGTGTCATCCGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPWILMS*SVIRGP Trigger: TGGGCCCCGGATGACACTGCAGCTCATTAAGATCCA...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | CCGGACTGCACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATACCTGGGGCAGTTCTGTaGTGTTGTGTTCTCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: PDCTGSQAASGPQSGASIPGAVL*CCVLHL Trigger: CAGATGGAGAACACAACACCACAGAACTGCCCCAGG...TATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTGCAGTCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCTTCCCGACGCCCTCCTaGATCTTAATGAGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPFPTPS*ILMSCS Trigger: ACTGCAGCTCATTAAGATCCAGGAGGGCGTCGGGAA...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCTTGTGTACAAAACTGTaGAAGAGGACATTGCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPLCTKL*KRTLPF Trigger: GAACGGCAATGTCCTCTTCCACAGTTTTGTACACAA...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTGGATCCCACTGCCTCTGGCGGTaGCCCTGGGTCCTCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: RLRTGQFLYKRKPDCTGSHCLWR*PWVLSI Trigger: GATGCTGAGGACCCAGGGGCACCGCCAGAGGCAGTG...GGATCCAGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR TCA 90 bp | TATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTCCGCTCGGCCTCGCGTaGACACGAACGAGTGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: YWRLRTGQFLYKRKPDCTPLGLA*TRTSAA Trigger: AGCCGCACTCGTTCGTGTTCACGCGAGGCCGAGCGG...AGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | AGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTGGATCCCCTGGTGTGTGGCTCTaGGTCTCGGCTTGGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RLRTGQFLYKRKPDCTGSPGVWL*VSAWPC Trigger: GCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGG...GGATCCAGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTGGATCCGCCATGAGCTTGATGTaGATGCCCTGGGGGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RLRTGQFLYKRKPDCTGSAMSLM*MPWGPK Trigger: CTTCGGCCCCCAGGGCATGCACATCAAGCTCATGGC...GGATCCAGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTGGATCCCGCGCAGCTCCTGCTTaGGCTGCAAGTTCTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RLRTGQFLYKRKPDCTGSRAAPA*AASSLP Trigger: AGGCAGAGAACTTGCAGCGCAAGCAGGAGCTGCGCG...GGATCCAGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | TATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTCGGACGGCGCTCTGTTaGGCCTGCATGTTGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: YWRLRTGQFLYKRKPDCTRTALC*ACMLPR Trigger: CCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCG...AGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | AGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTGGATCCTTGATGTGCATGCCCTaGGGGCCGAAGCTGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLRTGQFLYKRKPDCTGSLMCMP*GPKLLS Trigger: GCTCAACAGCTTCGGCCCCCAGGGCATGCACATCAA...GGATCCAGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | TATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTCTCTGGCGGTGCCCCTaGGTCCTCAGCATCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: YWRLRTGQFLYKRKPDCTLWRCP*VLSITV Trigger: GACAGTGATGCTGAGGACCCAGGGGCACCGCCAGAG...AGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | GTTCAGGTTTATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGCAGGGGGCCAGCCACTaGCACACAGTCCTTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: VQVYWRLRTGQFLYKRKPQGASH*HTVLQG Trigger: TCCCTGAAGGACTGTGTGGCAGTGGCTGGCCCCCTG...CGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATAAACCTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | TATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTTCTGGAACGTCAAAGTaGGGCCTCCTGGGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: YWRLRTGQFLYKRKPDCTSGTSK*GLLGAA Trigger: TGCGGCTCCCAGGAGGCCCCACTTTGACGTTCCAGA...AGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | AGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTGGATCCGACGGGAACAGGTTCTaGAACATGGTGGCCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLRTGQFLYKRKPDCTGSDGNRF*NMVAMS Trigger: GCTCATGGCCACCATGTTCCAGAACCTGTTCCCGTC...GGATCCAGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | TATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTCTCTGGGTCTCGGCTTaGCCTTGCCTCTCTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: YWRLRTGQFLYKRKPDCTLWVSA*PCLSGI Trigger: GATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAG...AGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | GTTCAGGTTTATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGCTGGGCGTGAGTCCTaGTGTGTGGCTCTGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VQVYWRLRTGQFLYKRKPAGRES*CVALGL Trigger: GAGACCCAGAGCCACACACCAGGACTCACGCCCAGC...CGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATAAACCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR TCA 90 bp | TATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTTCTTCATCTTCAGGCTaGCCTGCCCCCACTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: YWRLRTGQFLYKRKPDCTSSSSG*PAPTAS Trigger: AGAGGCAGTGGGGGCAGGTCAGCCTGAAGATGAAGA...AGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | GTTCAGGTTTATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGGAGCTTCTCCTCCTTaGCTGCCAGGATGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VQVYWRLRTGQFLYKRKPGASPP*LPGWPA Trigger: TGCAGGCCATCCTGGCAGCCAAGGAGGAGAAGCTCC...CGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATAAACCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR GCA 90 bp | GTTCAGGTTTATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGTTAAACTGCTGCTCGTaGATCCGGTGTCGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VQVYWRLRTGQFLYKRKPLNCCS*IRCRRR Trigger: CCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAA...CGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATAAACCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CCA 90 bp | GTTCAGGTTTATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGACCAGGAGGGGAGGGTaGTTAAACTGCTGCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQVYWRLRTGQFLYKRKPTRRGG*LNCCSC Trigger: GCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGT...CGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATAAACCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGTTTATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGGAGGGTGGTTAAACTaGTGCTCGTGCATCCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQVYWRLRTGQFLYKRKPGGWLN*CSCIRC Trigger: ACACCGGATGCACGAGCAGCAGTTTAACCACCCTCC...CGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATAAACCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGTTTATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGAGCTCACTGATGTCCTaGAGTCGGCTCATGTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQVYWRLRTGQFLYKRKPSSLMS*SRLMLG Trigger: CCCTAACATGAGCCGACTGCAGGACATCAGTGAGCT...CGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATAAACCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR CAA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCCTGAGCTGCCGGACATaGCGACCCGCTCGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPLSCRT*RPARPR Trigger: GCGAGGCCGAGCGGGTCGCAATGTCCGGCAGCTCAG...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS GCA 90 bp | ATTGCGACCCGCTCGGCCTCGCGTGAACACGAACGAGTGCGGCTGTaGAGCGTAGGACTCGAGGTTGCGGAGCTGCGCCTGGGCGCGATT | + |
|
Preference number: 5 (lower is better) Translates to: IATRSASREHERVRL*SVGLEVAELRLGAI Trigger: AATCGCGCCCAGGCGCAGCTCCGCAACCTCGAGTCCTACGCTGCACAGCCGCACTCGTTCGTGTTCACGCGAGGCCGAGCGGGTCGCAAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS-3UTR CAA 90 bp | TCTGATAGCCCCACACCCGTGGCCAGCAGCTCACTGATGTCCTGCAGTCGGCTCCTGAGCTGCCGGACATaGCGACCCGCTCGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SDSPTPVASSSLMSCSRLLSCRT*RPARPR Trigger: GCGAGGCCGAGCGGGTCGCAATGTCCGGCAGCTCAG...GAGCCGACTGCAGGACATCAGTGAGCTGCTGGCCACGGGTGTGGGGCTATCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
||
| CDS GCA 90 bp | GTAGCGGTGAGAGGTTCCATGACCCGCCGCACATCCAGGCTGAGCTaGCGGACATTGCGACCCGCTCGGCCTCGCGTGAACACGAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAVRGSMTRRTSRLS*RTLRPARPRVNTNE Trigger: CTCGTTCGTGTTCACGCGAGGCCGAGCGGGTCGCAATGTCCGGCAGCTCAGCCTGGATGTGCGGCGGGTCATGGAACCTCTCACCGCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS-3UTR CAA 90 bp | CCGGACTGCACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATATCGGACGGCGCTCTGTaGGGCCTGCATGTTGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PDCTGSQAASGPQSGASISDGAL*GLHVAT Trigger: CGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGA...TATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTGCAGTCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS GCA 90 bp | GGGCCGAAGCTGTTGAGCACCAGGAGGGGAGGGTGGTTAAACTGCTaGTCGTGCATCCGGTGTCGGCGCAGGGAAGAGACCACGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GPKLLSTRRGGWLNC*SCIRCRRREETTSR Trigger: ACGGGACGTGGTCTCTTCCCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCTCAACAGCTTCGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS GCA 90 bp | TGGGGGCCGAAGCTGTTGAGCACCAGGAGGGGAGGGTGGTTAAACTaGTGCTCGTGCATCCGGTGTCGGCGCAGGGAAGAGACCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WGPKLLSTRRGGWLN*CSCIRCRRREETTS Trigger: GGACGTGGTCTCTTCCCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCTCAACAGCTTCGGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS GCA 90 bp | ATCCTCTTCATCTTCAGGCTGACCTGCCCCCACTGCCTCTGGCGGTaGCCCTGGGTCCTCAGCATCACTGTCACCGTCGGCCCTTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: ILFIFRLTCPHCLWR*PWVLSITVTVGPCT Trigger: CGTGCAAGGGCCGACGGTGACAGTGATGCTGAGGACCCAGGGGCACCGCCAGAGGCAGTGGGGGCAGGTCAGCCTGAAGATGAAGAGGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS CCA 90 bp | TGCATGCCCTGGGGGCCGAAGCTGTTGAGCACCAGGAGGGGAGGGTaGTTAAACTGCTGCTCGTGCATCCGGTGTCGGCGCAGGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CMPWGPKLLSTRRGG*LNCCSCIRCRRREE Trigger: CTCTTCCCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCTCAACAGCTTCGGCCCCCAGGGCATGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS CCA 90 bp | AGTGTCATCCGGGGCCCAATCTCAGTAAGTCGGACGGCGCTCTGTTaGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVIRGPISVSRTALC*ACMLPRPATAWGSS Trigger: AGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGACTTACTGAGATTGGGCCCCGGATGACACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR CAA 90 bp | CACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAGTCCACCCTCGCGCAGCTCCTGCTaGCGCTGCAAGTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HWIPGSFRAPIWGIHSPPSRSSC*RCKFSA Trigger: GGCAGAGAACTTGCAGCGCAAGCAGGAGCTGCGCGA...GGGTGGACTATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR CAA 90 bp | CTGTTGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTCGCTGCGTGTGCACGTaGATGGACGGGAACAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGLHVATAGHSLGQFCGRCVCT*MDGNRF Trigger: GAACCTGTTCCCGTCCATCAACGTGCACACGCAGCG...ACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
||
| CDS GCA 90 bp | CCTCAGCATCACTGTCACCGTCGGCCCTTGCACGGGCTCGCTTTATaGCTGCCAGGCTCTTCTTCTTGTGGGCCTCGCGCAGCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQHHCHRRPLHGLAL*LPGSSSCGPRAAPA Trigger: AGCAGGAGCTGCGCGAGGCCCACAAGAAGAAGAGCCTGGCAGGCATAAAGCGAGCCCGTGCAAGGGCCGACGGTGACAGTGATGCTGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR CAA 90 bp | CCGGACTGCACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATAATGGTGGCCATGAGCTaGATGTGCATGCCCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDCTGSQAASGPQSGASIMVAMS*MCMPWG Trigger: CCCCCAGGGCATGCACATCAAGCTCATGGCCACCAT...TATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTGCAGTCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS TCA 90 bp | TCGCGCAGCTCCTGCTTGCGCTGCAAGTTCTCTGCCTGTTGGTTCTaGCGCTGTGCCTTCAGCCGGAGCTTCTCCTCCTTGGCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSCLRCKFSACWF*RCAFSRSFSSLAAR Trigger: CCTGGCAGCCAAGGAGGAGAAGCTCCGGCTGAAGGCACAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGCAAGCAGGAGCTGCGCGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR CAA 90 bp | CCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTCTGTGGTGTTGTGTTATGGTGGCCATGAGCTaGATGTGCATGCCCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PACCHGRPQPGAVLWCCVMVAMS*MCMPWG Trigger: CCCCCAGGGCATGCACATCAAGCTCATGGCCACCAT...AACACAACACCACAGAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
||
| CDS GCA 90 bp | CTCCTGCTTGCGCTGCAAGTTCTCTGCCTGTTGGTTCTGACGCTGTaGCTTCAGCCGGAGCTTCTCCTCCTTGGCTGCCAGGATGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLALQVLCLLVLTL*LQPELLLLGCQDGL Trigger: CAGGCCATCCTGGCAGCCAAGGAGGAGAAGCTCCGGCTGAAGGCACAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGCAAGCAGGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS GCA 90 bp | ATACTCAGCGTCATCCTCTTCATCTTCAGGCTGACCTGCCCCCACTaGCTCTGGCGGTGCCCCTGGGTCCTCAGCATCACTGTCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILSVILFIFRLTCPH*LWRCPWVLSITVTV Trigger: GACGGTGACAGTGATGCTGAGGACCCAGGGGCACCGCCAGAGGCAGTGGGGGCAGGTCAGCCTGAAGATGAAGAGGATGACGCTGAGTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS GCA 90 bp | CTGGCGGAAATACTCAGCGTCATCCTCTTCATCTTCAGGCTGACCTaGCCCCACTGCCTCTGGCGGTGCCCCTGGGTCCTCAGCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: LAEILSVILFIFRLT*PHCLWRCPWVLSIT Trigger: AGTGATGCTGAGGACCCAGGGGCACCGCCAGAGGCAGTGGGGGCAGGTCAGCCTGAAGATGAAGAGGATGACGCTGAGTATTTCCGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS GCA 90 bp | CTGGGCGTGAGTCCTGGTGTGTGGCTCTGGGTCTCGGCTTGGCCTTaGCTCTCTGGGATCTACCTTGTAGCTTCAGAGCCTGCCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGVSPGVWLWVSAWP*LSGIYLVASEPASC Trigger: GCAACTGGCAGGCTCTGAAGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS GCA 90 bp | AAGCTGTTGAGCACCAGGAGGGGAGGGTGGTTAAACTGCTGCTCGTaGATCCGGTGTCGGCGCAGGGAAGAGACCACGTCCCGTATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLLSTRRGGWLNCCS*IRCRRREETTSRIS Trigger: ACTGATACGGGACGTGGTCTCTTCCCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCTCAACAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS GCA 90 bp | TGCCTGCCAGGCTCTTCTTCTTGTGGGCCTCGCGCAGCTCCTGCTTaGGCTGCAAGTTCTCTGCCTGTTGGTTCTGACGCTGTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLPGSSSCGPRAAPA*AASSLPVGSDAVPS Trigger: TGAAGGCACAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGCAAGCAGGAGCTGCGCGAGGCCCACAAGAAGAAGAGCCTGGCAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 90 bp | TTGATGCTGGGCGTGAGTCCTGGTGTGTGGCTCTGGGTCTCGGCTTaGCCTTGCCTCTCTGGGATCTACCTTGTAGCTTCAGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LMLGVSPGVWLWVSA*PCLSGIYLVASEPA Trigger: GGCAGGCTCTGAAGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCCCAGCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS-3UTR CAA 90 bp | CCGGACTGCACTGGATCCCAGGCAGCTTCCGGGCCCCAATCTGGGGCATCCATATCGGAAGTCCAGCTCTaGGGAGTCAGGGTTGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PDCTGSQAASGPQSGASISEVQL*GVRVVV Trigger: AACTACAACCCTGACTCCCAAGAGCTGGACTTCCGA...TATGGATGCCCCAGATTGGGGCCCGGAAGCTGCCTGGGATCCAGTGCAGTCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS TCA 90 bp | CTCTGGGATCTACCTTGTAGCTTCAGAGCCTGCCAGTTGCCACCCTaGCCTCGGCCTTTATTACCAGGCCTCTGCTCCTTCCCTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LWDLPCSFRACQLPP*PRPLLPGLCSFPRC Trigger: GCAGCGAGGGAAGGAGCAGAGGCCTGGTAATAAAGGCCGAGGTCAGGGTGGCAACTGGCAGGCTCTGAAGCTACAAGGTAGATCCCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS GCA 90 bp | AAGAGGACATTGCCGTTCCCGACGCCCTCCTGGATCTTAATGAGCTaGAGTGTCATCCGGGGCCCAATCTCAGTAAGTCGGACGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KRTLPFPTPSWILMS*SVIRGPISVSRTAL Trigger: GAGCGCCGTCCGACTTACTGAGATTGGGCCCCGGATGACACTGCAGCTCATTAAGATCCAGGAGGGCGTCGGGAACGGCAATGTCCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS CCA 90 bp | GTGTTCAGGTTCACCGTGTGCACGTTGATGGACGGGAACAGGTTCTaGAACATGGTGGCCATGAGCTTGATGTGCATGCCCTGGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VFRFTVCTLMDGNRF*NMVAMSLMCMPWGP Trigger: CGGCCCCCAGGGCATGCACATCAAGCTCATGGCCACCATGTTCCAGAACCTGTTCCCGTCCATCAACGTGCACACGGTGAACCTGAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS CCA 90 bp | AACAGGTTCTGGAACATGGTGGCCATGAGCTTGATGTGCATGCCCTaGGGGCCGAAGCTGTTGAGCACCAGGAGGGGAGGGTGGTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NRFWNMVAMSLMCMP*GPKLLSTRRGGWLN Trigger: GTTTAACCACCCTCCCCTCCTGGTGCTCAACAGCTTCGGCCCCCAGGGCATGCACATCAAGCTCATGGCCACCATGTTCCAGAACCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS CCA 90 bp | AGTTTCTTCTCCTTGATGCTGGGCGTGAGTCCTGGTGTGTGGCTCTaGGTCTCGGCTTGGCCTTGCCTCTCTGGGATCTACCTTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFFSLMLGVSPGVWL*VSAWPCLSGIYLVA Trigger: AGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCCCAGCATCAAGGAGAAGAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS GCA 90 bp | CTGTCTGATAGCCCCACACCCGTGGCCAGCAGCTCACTGATGTCCTaGAGTCGGCTCATGTTAGGGAACTTCTCCTGTAAGAGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSDSPTPVASSSLMS*SRLMLGNFSCKSFF Trigger: GAAGAAGCTCTTACAGGAGAAGTTCCCTAACATGAGCCGACTGCAGGACATCAGTGAGCTGCTGGCCACGGGTGTGGGGCTATCAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS CCA 90 bp | TGTACAAAACTGTGGAAGAGGACATTGCCGTTCCCGACGCCCTCCTaGATCTTAATGAGCTGCAGTGTCATCCGGGGCCCAATCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CTKLWKRTLPFPTPS*ILMSCSVIRGPISV Trigger: TACTGAGATTGGGCCCCGGATGACACTGCAGCTCATTAAGATCCAGGAGGGCGTCGGGAACGGCAATGTCCTCTTCCACAGTTTTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTGGATCCGCTCTGGGTCTCGGCTaGGCCTTGCCTCTCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLRTGQFLYKRKPDCTGSALGLG*ALPLWD Trigger: ATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGC...GGATCCAGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR CAA 90 bp | GTTCAGGTTTATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGCGGAGCTTCTCCTCCTaGGCTGCCAGGATGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VQVYWRLRTGQFLYKRKPRSFSS*AARMAC Trigger: GCAGGCCATCCTGGCAGCCAAGGAGGAGAAGCTCCG...CGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATAAACCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS-3UTR CAA 90 bp | TATTGGAGGTTAAGAACTGGGCAGTTCCTTTATAAAAGGAAACCGGACTGCACTTTCACCGTGTGCACGTaGATGGACGGGAACAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YWRLRTGQFLYKRKPDCTFTVCT*MDGNRF Trigger: GAACCTGTTCCCGTCCATCAACGTGCACACGGTGAA...AGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTCTTAACCTCCAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS CCA 90 bp | TATCAGTGTATACTTGCTGATCTGGAACGTCAAAGTGGGGCCTCCTaGGAGCCGCATCAGCTTCAAGTATACACTGTTATCTGTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YQCILADLERQSGAS*EPHQLQVYTVICFG Trigger: ACCAAAACAGATAACAGTGTATACTTGAAGCTGATGCGGCTCCCAGGAGGCCCCACTTTGACGTTCCAGATCAGCAAGTATACACTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS GCA 72 bp | AGGACTCGAGGTTGCGGAGCTGCGCCTGGGCGCGATTaGGCTTCTGATGTCGGGACCGCCCGGACTGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTRGCGAAPGRD*ASDVGTARTAP Trigger: TGGGGCAGTCCGGGCGGTCCCGACATCAGAAGCGCAATCGCGCCCAGGCGCAGCTCCGCAACCTCGAGTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS GCA 72 bp | CGCTCGGCCTCGCGTGAACACGAACGAGTGCGGCTGTaGAGCGTAGGACTCGAGGTTGCGGAGCTGCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSASREHERVRL*SVGLEVAELRL Trigger: CAGGCGCAGCTCCGCAACCTCGAGTCCTACGCTGCACAGCCGCACTCGTTCGTGTTCACGCGAGGCCGAGCG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS GCA 72 bp | AGAGGTTCCATGACCCGCCGCACATCCAGGCTGAGCTaGCGGACATTGCGACCCGCTCGGCCTCGCGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RGSMTRRTSRLS*RTLRPARPRVN Trigger: GTTCACGCGAGGCCGAGCGGGTCGCAATGTCCGGCAGCTCAGCCTGGATGTGCGGCGGGTCATGGAACCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS CAA 72 bp | ATGACCCGCCGCACATCCAGGCTGAGCTGCCGGACATaGCGACCCGCTCGGCCTCGCGTGAACACGAACGAG | + |
|
Preference number: 6 (lower is better) Translates to: MTRRTSRLSCRT*RPARPRVNTNE Trigger: CTCGTTCGTGTTCACGCGAGGCCGAGCGGGTCGCAATGTCCGGCAGCTCAGCCTGGATGTGCGGCGGGTCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS CAA 90 bp | AGAGGTTCCATGACCCGCCGCACATCCAGGCTGAGCTGCCGGACATaGCGACCCGCTCGGCCTCGCGTGAACACGAACGAGTGCGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGSMTRRTSRLSCRT*RPARPRVNTNECGC Trigger: ACAGCCGCACTCGTTCGTGTTCACGCGAGGCCGAGCGGGTCGCAATGTCCGGCAGCTCAGCCTGGATGTGCGGCGGGTCATGGAACCTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS CAA 90 bp | CAGTGTCATCCGGGGCCCAATCTCAGTAAGTCGGACGGCGCTCTGTaGGGCCTGCATGTTGCCACGGCCGGCCACAGCCTGGGGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QCHPGPNLSKSDGAL*GLHVATAGHSLGQF Trigger: GAACTGCCCCAGGCTGTGGCCGGCCGTGGCAACATGCAGGCCCAACAGAGCGCCGTCCGACTTACTGAGATTGGGCCCCGGATGACACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
||
| CDS GCA 72 bp | CGAACGAGTGCGGCTGTGCAGCGTAGGACTCGAGGTTaGGGAGCTGCGCCTGGGCGCGATTGCGCTTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RTSAAVQRRTRG*GAAPGRDCASD Trigger: ATCAGAAGCGCAATCGCGCCCAGGCGCAGCTCCGCAACCTCGAGTCCTACGCTGCACAGCCGCACTCGTTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS CCA 72 bp | TGGGGGCCGAAGCTGTTGAGCACCAGGAGGGGAGGGTaGTTAAACTGCTGCTCGTGCATCCGGTGTCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: WGPKLLSTRRGG*LNCCSCIRCRR Trigger: GCGCCGACACCGGATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCTCAACAGCTTCGGCCCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
||
| CDS GCA 72 bp | AGCACCAGGAGGGGAGGGTGGTTAAACTGCTGCTCGTaGATCCGGTGTCGGCGCAGGGAAGAGACCACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: STRRGGWLNCCS*IRCRRREETTS Trigger: GGACGTGGTCTCTTCCCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS GCA 72 bp | GGCCTCGCGCAGCTCCTGCTTGCGCTGCAAGTTCTCTaGCTGTTGGTTCTGACGCTGTGCCTTCAGCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLAQLLLALQVL*LLVLTLCLQPE Trigger: CTCCGGCTGAAGGCACAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGCAAGCAGGAGCTGCGCGAGGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 72 bp | CCCCTGGGTCCTCAGCATCACTGTCACCGTCGGCCCTaGCACGGGCTCGCTTTATGCCTGCCAGGCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PLGPQHHCHRRP*HGLALCLPGSS Trigger: AGAAGAGCCTGGCAGGCATAAAGCGAGCCCGTGCAAGGGCCGACGGTGACAGTGATGCTGAGGACCCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 90 bp | GTGGGCCTCGCGCAGCTCCTGCTTGCGCTGCAAGTTCTCTGCCTGTaGGTTCTGACGCTGTGCCTTCAGCCGGAGCTTCTCCTCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VGLAQLLLALQVLCL*VLTLCLQPELLLLG Trigger: GCCAAGGAGGAGAAGCTCCGGCTGAAGGCACAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGCAAGCAGGAGCTGCGCGAGGCCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS GCA 72 bp | CTGTTGAGCACCAGGAGGGGAGGGTGGTTAAACTGCTaGTCGTGCATCCGGTGTCGGCGCAGGGAAGAGACC | + |
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Preference number: 6 (lower is better) Translates to: LLSTRRGGWLNC*SCIRCRRREET Trigger: GGTCTCTTCCCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCTCAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS GCA 72 bp | CCCTGGGTCCTCAGCATCACTGTCACCGTCGGCCCTTaGACGGGCTCGCTTTATGCCTGCCAGGCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PWVLSITVTVGP*TGSLYACQALL Trigger: AAGAAGAGCCTGGCAGGCATAAAGCGAGCCCGTGCAAGGGCCGACGGTGACAGTGATGCTGAGGACCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | TGGAACATGGTGGCCATGAGCTTGATGTGCATGCCCTaGGGGCCGAAGCTGTTGAGCACCAGGAGGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: WNMVAMSLMCMP*GPKLLSTRRGG Trigger: CCCTCCCCTCCTGGTGCTCAACAGCTTCGGCCCCCAGGGCATGCACATCAAGCTCATGGCCACCATGTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS CAA 90 bp | GCTGGGCGTGAGTCCTGGTGTGTGGCTCTGGGTCTCGGCTTGGCCTaGCCTCTCTGGGATCTACCTTGTAGCTTCAGAGCCTGCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: AGRESWCVALGLGLA*PLWDLPCSFRACQL Trigger: CAACTGGCAGGCTCTGAAGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS TCA 72 bp | TCTTCATGCCGCGGCTTGCACCCACGGGAACCACTTTaGCGCTGCGTGTGCACGTTGATGGACGGGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSCRGLHPREPL*RCVCTLMDGNR Trigger: CCTGTTCCCGTCCATCAACGTGCACACGCAGCGTCAAAGTGGTTCCCGTGGGTGCAAGCCGCGGCATGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS GCA 72 bp | AAGCTGTTGAGCACCAGGAGGGGAGGGTGGTTAAACTaGTGCTCGTGCATCCGGTGTCGGCGCAGGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: KLLSTRRGGWLN*CSCIRCRRREE Trigger: CTCTTCCCTGCGCCGACACCGGATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCTCAACAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS GCA 72 bp | GCGCTGCAAGTTCTCTGCCTGTTGGTTCTGACGCTGTaGCTTCAGCCGGAGCTTCTCCTCCTTGGCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ALQVLCLLVLTL*LQPELLLLGCQ Trigger: CTGGCAGCCAAGGAGGAGAAGCTCCGGCTGAAGGCACAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | TCCTTGATGCTGGGCGTGAGTCCTGGTGTGTGGCTCTaGGTCTCGGCTTGGCCTTGCCTCTCTGGGATCTAC | + |
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Preference number: 6 (lower is better) Translates to: SLMLGVSPGVWL*VSAWPCLSGIY Trigger: GTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCCCAGCATCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | TTCTTCTCCTTGATGCTGGGCGTGAGTCCTGGTGTGTaGCTCTGGGTCTCGGCTTGGCCTTGCCTCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: FFSLMLGVSPGV*LWVSAWPCLSG Trigger: CCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCCCAGCATCAAGGAGAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 72 bp | GCGCAGCTCCTGCTTGCGCTGCAAGTTCTCTGCCTGTaGGTTCTGACGCTGTGCCTTCAGCCGGAGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: AQLLLALQVLCL*VLTLCLQPELL Trigger: GAGAAGCTCCGGCTGAAGGCACAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGCAAGCAGGAGCTGCGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 72 bp | GGGCGTGAGTCCTGGTGTGTGGCTCTGGGTCTCGGCTaGGCCTTGCCTCTCTGGGATCTACCTTGTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GRESWCVALGLG*ALPLWDLPCSF Trigger: GAAGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 90 bp | ATGGTGGCCATGAGCTTGATGTGCATGCCCTGGGGGCCGAAGCTGTaGAGCACCAGGAGGGGAGGGTGGTTAAACTGCTGCTCGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: MVAMSLMCMPWGPKL*STRRGGWLNCCSCI Trigger: GATGCACGAGCAGCAGTTTAACCACCCTCCCCTCCTGGTGCTCAACAGCTTCGGCCCCCAGGGCATGCACATCAAGCTCATGGCCACCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS CAA 90 bp | CTTGATGCTGGGCGTGAGTCCTGGTGTGTGGCTCTGGGTCTCGGCTaGGCCTTGCCTCTCTGGGATCTACCTTGTAGCTTCAGAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LDAGRESWCVALGLG*ALPLWDLPCSFRAC Trigger: GCAGGCTCTGAAGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCCCAGCATCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS GCA 72 bp | GGCTCTTCTTCTTGTGGGCCTCGCGCAGCTCCTGCTTaGGCTGCAAGTTCTCTGCCTGTTGGTTCTGACGCT | + |
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Preference number: 6 (lower is better) Translates to: GSSSCGPRAAPA*AASSLPVGSDA Trigger: AGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGCAAGCAGGAGCTGCGCGAGGCCCACAAGAAGAAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | CTGTGGAAGAGGACATTGCCGTTCCCGACGCCCTCCTaGATCTTAATGAGCTGCAGTGTCATCCGGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LWKRTLPFPTPS*ILMSCSVIRGP Trigger: TGGGCCCCGGATGACACTGCAGCTCATTAAGATCCAGGAGGGCGTCGGGAACGGCAATGTCCTCTTCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | GGCGTGAGTCCTGGTGTGTGGCTCTGGGTCTCGGCTTaGCCTTGCCTCTCTGGGATCTACCTTGTAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GVSPGVWLWVSA*PCLSGIYLVAS Trigger: TGAAGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTCACGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 72 bp | GACGGGAACAGGTTCTGGAACATGGTGGCCATGAGCTaGATGTGCATGCCCTGGGGGCCGAAGCTGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: DGNRFWNMVAMS*MCMPWGPKLLS Trigger: GCTCAACAGCTTCGGCCCCCAGGGCATGCACATCAAGCTCATGGCCACCATGTTCCAGAACCTGTTCCCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS CAA 72 bp | GAGTCCTGGTGTGTGGCTCTGGGTCTCGGCTTGGCCTaGCCTCTCTGGGATCTACCTTGTAGCTTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: ESWCVALGLGLA*PLWDLPCSFRA Trigger: GGCTCTGAAGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 72 bp | TTCTTCATGCCGCGGCTTGCACCCACGGGAACCACTTaGACGCTGCGTGTGCACGTTGATGGACGGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: FFMPRLAPTGTT*TLRVHVDGREQ Trigger: CTGTTCCCGTCCATCAACGTGCACACGCAGCGTCAAAGTGGTTCCCGTGGGTGCAAGCCGCGGCATGAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS CAA 90 bp | ACGTTGATGGACGGGAACAGGTTCTGGAACATGGTGGCCATGAGCTaGATGTGCATGCCCTGGGGGCCGAAGCTGTTGAGCACCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TLMDGNRFWNMVAMS*MCMPWGPKLLSTRR Trigger: CCTCCTGGTGCTCAACAGCTTCGGCCCCCAGGGCATGCACATCAAGCTCATGGCCACCATGTTCCAGAACCTGTTCCCGTCCATCAACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS TCA 72 bp | TCTTCATGCCGCGGCTTGCACCCACGGGAACCACTTTaGCGCTGTAGTGTCGGAAGTCCAGCTCTTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SSCRGLHPREPL*RCSVGSPALGS Trigger: ACTCCCAAGAGCTGGACTTCCGACACTACAGCGTCAAAGTGGTTCCCGTGGGTGCAAGCCGCGGCATGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS TCA 72 bp | TCCTGCTTGCGCTGCAAGTTCTCTGCCTGTTGGTTCTaGCGCTGTGCCTTCAGCCGGAGCTTCTCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SCLRCKFSACWF*RCAFSRSFSSL Trigger: CAAGGAGGAGAAGCTCCGGCTGAAGGCACAGCGTCAGAACCAACAGGCAGAGAACTTGCAGCGCAAGCAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS TCA 72 bp | ACCCACGGGAACCACTTTGACGCTGCGTGTGCACGTTaGTGGACGGGAACAGGTTCTGGAACATGGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: THGNHFDAACAR*WTGTGSGTWWP Trigger: TGGCCACCATGTTCCAGAACCTGTTCCCGTCCATCAACGTGCACACGCAGCGTCAAAGTGGTTCCCGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS GCA 72 bp | AGCCCCACACCCGTGGCCAGCAGCTCACTGATGTCCTaGAGTCGGCTCATGTTAGGGAACTTCTCCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: SPTPVASSSLMS*SRLMLGNFSCK Trigger: CTTACAGGAGAAGTTCCCTAACATGAGCCGACTGCAGGACATCAGTGAGCTGCTGGCCACGGGTGTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS GCA 72 bp | TTGCCGTTCCCGACGCCCTCCTGGATCTTAATGAGCTaGAGTGTCATCCGGGGCCCAATCTCAGTAAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: LPFPTPSWILMS*SVIRGPISVSR Trigger: CCGACTTACTGAGATTGGGCCCCGGATGACACTGCAGCTCATTAAGATCCAGGAGGGCGTCGGGAACGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS GCA 72 bp | AGTCCTGGTGTGTGGCTCTGGGTCTCGGCTTGGCCTTaGCTCTCTGGGATCTACCTTGTAGCTTCAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPGVWLWVSAWP*LSGIYLVASEP Trigger: AGGCTCTGAAGCTACAAGGTAGATCCCAGAGAGGCAAGGCCAAGCCGAGACCCAGAGCCACACACCAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | GCCTGCAGCTCCTCCTCTGTCTTGTGTACAAAACTGTaGAAGAGGACATTGCCGTTCCCGACGCCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ACSSSSVLCTKL*KRTLPFPTPSW Trigger: CCAGGAGGGCGTCGGGAACGGCAATGTCCTCTTCCACAGTTTTGTACACAAGACAGAGGAGGAGCTGCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | CGCTGCGTGTGCACGTTGATGGACGGGAACAGGTTCTaGAACATGGTGGCCATGAGCTTGATGTGCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: RCVCTLMDGNRF*NMVAMSLMCMP Trigger: GGGCATGCACATCAAGCTCATGGCCACCATGTTCCAGAACCTGTTCCCGTCCATCAACGTGCACACGCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214331.2 |
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| CDS TCA 72 bp | GGGAAGAGACCACGTCCCGTATCAGTGTATACTTGCTaGTCTGGAACGTCAAAGTGGGGCCTCCTGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GKRPRPVSVYTC*SGTSKWGLLGA Trigger: GGCTCCCAGGAGGCCCCACTTTGACGTTCCAGATCAGCAAGTATACACTGATACGGGACGTGGTCTCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS CAA 72 bp | CGCAGGGAAGAGACCACGTCCCGTATCAGTGTATACTaGCTGATCTGGAACGTCAAAGTGGGGCCTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RREETTSRISVY*LIWNVKVGPPG Trigger: CCCAGGAGGCCCCACTTTGACGTTCCAGATCAGCAAGTATACACTGATACGGGACGTGGTCTCTTCCCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS GCA 72 bp | AATAAGGAAGTGTGTGACCCCCAGGGGGCCAGCCACTaGCACACAGTCCTTCAGGGAGTTCTTCTTTCGAAC | + |
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Preference number: 6 (lower is better) Translates to: NKEVCDPQGASH*HTVLQGVLLSN Trigger: GTTCGAAAGAAGAACTCCCTGAAGGACTGTGTGGCAGTGGCTGGCCCCCTGGGGGTCACACACTTCCTTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004203.6 ENSMUST00000214331.2 |
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| CDS GCA 72 bp | TCTGGGATCTACCTTGTAGCTTCAGAGCCTGCCAGTTaGCACCCTGACCTCGGCCTTTATTACCAGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SGIYLVASEPAS*HPDLGLYYQAS Trigger: AGAGGCCTGGTAATAAAGGCCGAGGTCAGGGTGGCAACTGGCAGGCTCTGAAGCTACAAGGTAGATCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | TTCACCGTGTGCACGTTGATGGACGGGAACAGGTTCTaGAACATGGTGGCCATGAGCTTGATGTGCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: FTVCTLMDGNRF*NMVAMSLMCMP Trigger: GGGCATGCACATCAAGCTCATGGCCACCATGTTCCAGAACCTGTTCCCGTCCATCAACGTGCACACGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CCA 72 bp | GGGAACAAGTCTTCGTCAGGCTCCTCCCCCACAGCCTaGCGGAAATACTCAGCGTCATCCTCTTCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GNKSSSGSSPTA*RKYSASSSSSS Trigger: TGAAGATGAAGAGGATGACGCTGAGTATTTCCGCCAGGCTGTGGGGGAGGAGCCTGACGAAGACTTGTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 90 bp | ACCCACGGGAACCACTTTGACGCTGTAGTGTCGGAAGTCCAGCTCTaGGGAGTCAGGGTTGTAGTTAATGAGGAGGCAGCGCTTAATGGT | + |
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Preference number: 6 (lower is better) Translates to: THGNHFDAVVSEVQL*GVRVVVNEEAALNG Trigger: ACCATTAAGCGCTGCCTCCTCATTAACTACAACCCTGACTCCCAAGAGCTGGACTTCCGACACTACAGCGTCAAAGTGGTTCCCGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 90 bp | TGCAGCTCCTCCTCTGTCTTGTGTACAAAACTGTGGAAGAGGACATaGCCGTTCCCGACGCCCTCCTGGATCTTAATGAGCTGCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: CSSSSVLCTKLWKRT*PFPTPSWILMSCSV Trigger: GACACTGCAGCTCATTAAGATCCAGGAGGGCGTCGGGAACGGCAATGTCCTCTTCCACAGTTTTGTACACAAGACAGAGGAGGAGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 72 bp | AACCACTTTGACGCTGTAGTGTCGGAAGTCCAGCTCTaGGGAGTCAGGGTTGTAGTTAATGAGGAGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: NHFDAVVSEVQL*GVRVVVNEEAA Trigger: CGCTGCCTCCTCATTAACTACAACCCTGACTCCCAAGAGCTGGACTTCCGACACTACAGCGTCAAAGTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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| CDS CAA 72 bp | TCCTCTGTCTTGTGTACAAAACTGTGGAAGAGGACATaGCCGTTCCCGACGCCCTCCTGGATCTTAATGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSVLCTKLWKRT*PFPTPSWILMS Trigger: GCTCATTAAGATCCAGGAGGGCGTCGGGAACGGCAATGTCCTCTTCCACAGTTTTGTACACAAGACAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004203.6 |
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