Pregenerated sensors for PPA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028013Ensembl transcript IDs: ENSMUST00000029644.16, ENSMUST00000106315.4, ENSMUST00000122334.8
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCCAGGTGCCCGGCAAGAGCACTAAAGGAGAAGGAACCCCGGGAGTCCCTGGAGAACCCCGGGAGTCCCTaGAGGCTGACGTCAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SRCPARALKEKEPRESLENPGSP*RLTSVQ Trigger: CTGCACTGACGTCAGCCTCCAGGGACTCCCGGGGTT...CTCCAGGGACTCCCGGGGTTCCTTCTCCTTTAGTGCTCTTGCCGGGCACCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGCCCGGCAAGAGCACTAAAGGAGAAGGAACCCCGGGAGTCCCTGGAGGCAGGTTGACATCTCGGTaGAGAAGCCCTGTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QVPGKSTKGEGTPGVPGGRLTSR*RSPVSP Trigger: TGGGGACACAGGGCTTCTGCACCGAGATGTCAACCT...GCCTCCAGGGACTCCCGGGGTTCCTTCTCCTTTAGTGCTCTTGCCGGGCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGTGCCCGGCAAGAGCACTAAAGGAGAAGGAACCCCGGGAGTCCCTGGAGAGGTTGACATCTCGGTaGAGAAGCCCTGTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SRCPARALKEKEPRESLERLTSR*RSPVSP Trigger: TGGGGACACAGGGCTTCTGCACCGAGATGTCAACCT...CTCCAGGGACTCCCGGGGTTCCTTCTCCTTTAGTGCTCTTGCCGGGCACCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGAGAAAGGTTGACATCTCGGTaGAGAAGCCCTGTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: TGSHQMAIQVPGKSTKGERLTSR*RSPVSP Trigger: TGGGGACACAGGGCTTCTGCACCGAGATGTCAACCT...TTCTCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGAGAAGGATGTGTCCCCATCAGTTaGGGAGGAAGTGCCACACTT | + |
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Preference number: 2 (lower is better) Translates to: GSHQMAIQVPGKSTKGEGCVPIS*GGSATL Trigger: AAGTGTGGCACTTCCTCCGCAACTGATGGGGACACA...TCCTTCTCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106315.4 |
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| 3UTR-3UTR GCA 90 bp | GTTTTAACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAGTTGCGGAGGAAGTaGCACACTTCTTTCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VLTVMSDRKSSDGHPGARQLRRK*HTSFSV Trigger: GACTGAGAAAGAAGTGTGGCACTTCCTCCGCAACTG...CCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGTTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106315.4 |
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| 3UTR GCA 72 bp | GACATCTCGGTGCAGAAGCCCTGTGTCCCCATCAGTTaGGGAGGAAGTGCCACACTTCTTTCTCAGTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: DISVQKPCVPIS*GGSATLLSQSL Trigger: GAGAGACTGAGAAAGAAGTGTGGCACTTCCTCCGCAACTGATGGGGACACAGGGCTTCTGCACCGAGATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106315.4 |
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| CDS-3UTR TCA 90 bp | AAGGAACCCCGGGAGTCCCTGGAGGCTGACGTCAGTGCAGAAGCCCCGTGTCCCACGGGAAAGAACCTTTaGGCCTATTTCACAGACGTC | + |
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Preference number: 4 (lower is better) Translates to: KEPRESLEADVSAEAPCPTGKNL*AYFTDV Trigger: GACGTCTGTGAAATAGGCTCAAAGGTTCTTTCCCGT...GGGACACGGGGCTTCTGCACTGACGTCAGCCTCCAGGGACTCCCGGGGTTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTGTGTCCCAGTTGCGGAGGAAGTaGCACACTTCTTCCTCTACA | + |
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Preference number: 4 (lower is better) Translates to: AEAPCPQRLTSRCRSPVSQLRRK*HTSSST Trigger: TGTAGAGGAAGAAGTGTGGCACTTCCTCCGCAACTG...GGACACAGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029644.16 |
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| CDS-3UTR CCA 90 bp | CAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTGTTCCTCCATAGTGCAGTaGAAAGGGCTATCGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: QCRSPVSPEVDISVQKPCSSIVQ*KGLSQM Trigger: CATCTGCGATAGCCCTTTCCACTGCACTATGGAGGA...ACAGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | AGAAGGAACCCCGGGAGTCCCTGGAGGCTGACGTCAGTGCAGAAGCCCCGTGTCCCGTACCCTCTACATTaGTTTCCTTATTCATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRNPGSPWRLTSVQKPRVPYPLH*FPYSSK Trigger: CTTCGATGAATAAGGAAAGCAATGTAGAGGGTACGG...GACACGGGGCTTCTGCACTGACGTCAGCCTCCAGGGACTCCCGGGGTTCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106315.4 |
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| CDS-3UTR CCA 90 bp | GTCAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTTGGCAATCTCCATCTTaGCATTTGTCCACCGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: VSAEAPCPQRLTSRCRSPWQSPS*HLSTEV Trigger: TACCTCGGTGGACAAATGCCAAGATGGAGATTGCCA...AGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR CCA 90 bp | GTCAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTCTTAATGGGATTGAGTaGCTCCTCTGTGGCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: VSAEAPCPQRLTSRCRSPLNGIE*LLCGNL Trigger: GAGATTGCCACAGAGGAGCCACTCAATCCCATTAAG...AGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR CCA 90 bp | GCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTGTGTCCTTTCACAGACGTCAATaGGATCATTATCCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: AEAPCPQRLTSRCRSPVSFHRRQ*DHYPHS Trigger: GCTGTGGGGATAATGATCCCATTGACGTCTGTGAAA...GGACACAGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | AGAGCACTAAAGGAGAAGGAACCCCGGGAGTCCCTGGAGGCTGACGTCAGTGCAGCACATTTACACAACTaGTGGCTCCCTTGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: RALKEKEPRESLEADVSAAHLHN*WLPCHT Trigger: AGTGTGACAAGGGAGCCATCAGTTGTGTAAATGTGC...TGCACTGACGTCAGCCTCCAGGGACTCCCGGGGTTCCTTCTCCTTTAGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | GCAAGAGCACTAAAGGAGAAGGAACCCCGGGAGTCCCTGGAGGCTGACGTCAGTGCACATTTACACAACTaGTGGCTCCCTTGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: ARALKEKEPRESLEADVSAHLHN*WLPCHT Trigger: AGTGTGACAAGGGAGCCATCAGTTGTGTAAATGTGC...ACTGACGTCAGCCTCCAGGGACTCCCGGGGTTCCTTCTCCTTTAGTGCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | AGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTGTGTCCCCAACCGATTCAACCAATaGTCTTGCTTCCTCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: RSPVSPEVDISVQKPCVPNRFNQ*SCFLHS Trigger: ACTATGGAGGAAGCAAGATCATTGGTTGAATCGGTT...GGGGACACAGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | GTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACGCACATTTACACAACTaGTGGCTCCCTTGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: VMSDRKSSDGHPGARQEHAHLHN*WLPCHT Trigger: AGTGTGACAAGGGAGCCATCAGTTGTGTAAATGTGC...GTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGGCTGACGTCAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGACTCTGATCAATAAGTaGCAAAGTCCCAAGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: LEADVSAEAPCPQRLTSRTLINK*QSPKDL Trigger: AAGATCCTTGGGACTTTGGCACTTATTGATCAGAGT...CCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTGACGTCAGCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | CAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTGTCAATCTGTTTCACTCTaGTCAATAAGTGCCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QCRSPVSPEVDISVQKPCQSVSL*SISAKV Trigger: GACTTTGGCACTTATTGATCAGAGTGAAACAGATTG...ACAGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | GTCAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTCCGTTCTTTATATCTTaGTTAATGGGATTGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VSAEAPCPQRLTSRCRSPPFFIS*LMGLSG Trigger: GCCACTCAATCCCATTAAGCAAGATATAAAGAACGG...AGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR CCA 90 bp | CTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGATGGCAATCTCCATCTTaGCATTTGTCCACCGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: LTGSHQMAIQVPGKSTKGWQSPS*HLSTEV Trigger: TACCTCGGTGGACAAATGCCAAGATGGAGATTGCCA...TCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | CTAAAGGAGAAGGAACCCCGGGAGTCCCTGGAGGCTGACGTCAGTGCAGAAGCCATATTCATCATTTCGTaGCTTTTTCCTGGGAATGTC | + |
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Preference number: 4 (lower is better) Translates to: LKEKEPRESLEADVSAEAIFIIS*LFPGNV Trigger: GACATTCCCAGGAAAAAGGCACGAAATGATGAATAT...GGCTTCTGCACTGACGTCAGCCTCCAGGGACTCCCGGGGTTCCTTCTCCTTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | GACGTCAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCTTCTTCCTCTACATTaGTTTCCTTATTCATCGAAG | + |
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Preference number: 4 (lower is better) Translates to: DVSAEAPCPQRLTSRCRSLLPLH*FPYSSK Trigger: CTTCGATGAATAAGGAAAGCAATGTAGAGGAAGAAG...GCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTGACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029644.16 |
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| CDS-3UTR GCA 90 bp | GACGTCAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCACACTTCCTCTACATTaGTTTCCTTATTCATCGAAG | + |
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Preference number: 4 (lower is better) Translates to: DVSAEAPCPQRLTSRCRSTLPLH*FPYSSK Trigger: CTTCGATGAATAAGGAAAGCAATGTAGAGGAAGTGT...GCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTGACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122334.8 |
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| CDS-3UTR CCA 90 bp | ACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGAGAACTTAATGGGATTGAGTaGCTCCTCTGTGGCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: TGSHQMAIQVPGKSTKGELNGIE*LLCGNL Trigger: GAGATTGCCACAGAGGAGCCACTCAATCCCATTAAG...TTCTCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR CCA 90 bp | GTTTTAACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGTCCTCCATAGTGCAGTaGAAAGGGCTATCGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: VLTVMSDRKSSDGHPGARSSIVQ*KGLSQM Trigger: CATCTGCGATAGCCCTTTCCACTGCACTATGGAGGA...CCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGTTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | GTTTTAACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGACGGGAAAGAACCTTTaGGCCTATTTCACAGACGTC | + |
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Preference number: 4 (lower is better) Translates to: VLTVMSDRKSSDGHPGARTGKNL*AYFTDV Trigger: GACGTCTGTGAAATAGGCTCAAAGGTTCTTTCCCGT...CCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGTTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | GAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGAGAAGGAAAACCGATTCAACCAATaGTCTTGCTTCCTCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: EVIRWPSRCPARALKEKENRFNQ*SCFLHS Trigger: ACTATGGAGGAAGCAAGATCATTGGTTGAATCGGTT...TTCCTTCTCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGAGAAAACCGATTCAACCAATaGTCTTGCTTCCTCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: TGSHQMAIQVPGKSTKGENRFNQ*SCFLHS Trigger: ACTATGGAGGAAGCAAGATCATTGGTTGAATCGGTT...TTCTCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | GGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGAGAAGGACCGTTCTTTATATCTTaGTTAATGGGATTGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GSHQMAIQVPGKSTKGEGPFFIS*LMGLSG Trigger: GCCACTCAATCCCATTAAGCAAGATATAAAGAACGG...TCCTTCTCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | CTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGATTTCCAACGTTCATGTaGAGAGTTAATAACGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: LTGSHQMAIQVPGKSTKGFPTFM*RVNNVE Trigger: CTCGACGTTATTAACTCTGCACATGAACGTTGGAAA...TCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | ACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGTTTCCAACGTTCATGTaGAGAGTTAATAACGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: TVMSDRKSSDGHPGARQEFPTFM*RVNNVE Trigger: CTCGACGTTATTAACTCTGCACATGAACGTTGGAAA...CTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR CCA 90 bp | TCCCCATCAGTTGCGGAGGAAGTGCCACACTTCTTTCTCAGTCTCTCTCTTAAATCCTCCATAGTGCAGTaGAAAGGGCTATCGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: SPSVAEEVPHFFLSLSLKSSIVQ*KGLSQM Trigger: CATCTGCGATAGCCCTTTCCACTGCACTATGGAGGA...TTTAAGAGAGAGACTGAGAAAGAAGTGTGGCACTTCCTCCGCAACTGATGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106315.4 |
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| CDS-3UTR GCA 90 bp | GGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGAGAAGGAATATTCATCATTTCGTaGCTTTTTCCTGGGAATGTC | + |
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Preference number: 4 (lower is better) Translates to: GSHQMAIQVPGKSTKGEGIFIIS*LFPGNV Trigger: GACATTCCCAGGAAAAAGGCACGAAATGATGAATAT...TCCTTCTCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR GCA 90 bp | ACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGCACTAAAGGAGAATTTCCAACGTTCATGTaGAGAGTTAATAACGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: TGSHQMAIQVPGKSTKGEFPTFM*RVNNVE Trigger: CTCGACGTTATTAACTCTGCACATGAACGTTGGAAA...TTCTCCTTTAGTGCTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | TTAACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAACAATCTGTTTCACTCTaGTCAATAAGTGCCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LTVMSDRKSSDGHPGARQQSVSL*SISAKV Trigger: GACTTTGGCACTTATTGATCAGAGTGAAACAGATTG...TTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR TCA 90 bp | CCCCATCAGTTGCGGAGGAAGTGCCACACTTCTTTCTCAGTCTCTCTCTTAAACCAATCTGTTTCACTCTaGTCAATAAGTGCCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: PHQLRRKCHTSFSVSLLNQSVSL*SISAKV Trigger: GACTTTGGCACTTATTGATCAGAGTGAAACAGATTG...GTTTAAGAGAGAGACTGAGAAAGAAGTGTGGCACTTCCTCCGCAACTGATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106315.4 |
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| CDS TCA 90 bp | CCTGCGAGCGGGGATGGCCCAGCTCCTCCGTGCGGTACAGGGACATaGCGCGGCGCGGAGGGCGGGCGGCGGCCCCCACGCGCCACCCTC | + |
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Preference number: 5 (lower is better) Translates to: PASGDGPAPPCGTGT*RGAEGGRRPPRATL Trigger: GAGGGTGGCGCGTGGGGGCCGCCGCCCGCCCTCCGCGCCGCGTCATGTCCCTGTACCGCACGGAGGAGCTGGGCCATCCCCGCTCGCAGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR CAA 90 bp | GCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTGTGTCCGTGGCAATCTCCATCTaGGCATTTGTCCACCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: AEAPCPQRLTSRCRSPVSVAISI*AFVHRG Trigger: ACCTCGGTGGACAAATGCCAAGATGGAGATTGCCAC...GGACACAGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR CAA 90 bp | AGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTGTGTCCCCGTGGCAATCTCCATCTaGGCATTTGTCCACCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RSPVSPEVDISVQKPCVPVAISI*AFVHRG Trigger: ACCTCGGTGGACAAATGCCAAGATGGAGATTGCCAC...GGGGACACAGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR CAA 90 bp | AAGGAGAAGGAACCCCGGGAGTCCCTGGAGGCTGACGTCAGTGCAGAAGCCCCGTCGAGGGCGAAAGCCTaGTTTTTGAATTCTCCATTA | + |
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Preference number: 5 (lower is better) Translates to: KEKEPRESLEADVSAEAPSRAKA*FLNSPL Trigger: TAATGGAGAATTCAAAAACAAGGCTTTCGCCCTCGA...CGGGGCTTCTGCACTGACGTCAGCCTCCAGGGACTCCCGGGGTTCCTTCTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR CAA 90 bp | GTCAGTGCAGAAGCCCCGTGTCCCCAGAGGTTGACATCTCGGTGCAGAAGCCCTTCGAGGGCGAAAGCCTaGTTTTTGAATTCTCCATTA | + |
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Preference number: 5 (lower is better) Translates to: VSAEAPCPQRLTSRCRSPSRAKA*FLNSPL Trigger: TAATGGAGAATTCAAAAACAAGGCTTTCGCCCTCGA...AGGGCTTCTGCACCGAGATGTCAACCTCTGGGGACACGGGGCTTCTGCACTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR CAA 90 bp | ACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGAGTCTCCATCTTGGCATTaGTCCACCGAGGTATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: TVMSDRKSSDGHPGARQESPSWH*STEVFP Trigger: TGGAAATACCTCGGTGGACAAATGCCAAGATGGAGA...CTCTTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS GCA 90 bp | CTATTTCACAGACGTCAATGGGATCATTATCCCCACAGCAGTCGGTaGTCTTATCTCTTAGGTGAGGATCTTCCCAGGTCTGAGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: LFHRRQWDHYPHSSR*SYLLGEDLPRSEGG Trigger: CCCTCCCTCAGACCTGGGAAGATCCTCACCTAAGAGATAAGAGCACCGACTGCTGTGGGGATAATGATCCCATTGACGTCTGTGAAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS-3UTR CAA 90 bp | GTTTTAACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGTCTCCATCTTGGCATTaGTCCACCGAGGTATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VLTVMSDRKSSDGHPGARSPSWH*STEVFP Trigger: TGGAAATACCTCGGTGGACAAATGCCAAGATGGAGA...CCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGTTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS CCA 90 bp | CGTCTCCACGGGAAAGAACCTTTGAGCCTATTTCACAGACGTCAATaGGATCATTATCCCCACAGCAGTCGGTGCTCTTATCTCTTAGGT | + |
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Preference number: 5 (lower is better) Translates to: RLHGKEPLSLFHRRQ*DHYPHSSRCSYLLG Trigger: ACCTAAGAGATAAGAGCACCGACTGCTGTGGGGATAATGATCCCATTGACGTCTGTGAAATAGGCTCAAAGGTTCTTTCCCGTGGAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS GCA 90 bp | GATCTTGCTTCCTCCATAGTGCAGTGGAAAGGGCTATCGCAGATGTaGACATTTACACAACTGATGGCTCCCTTGTCACACTTCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: DLASSIVQWKGLSQM*TFTQLMAPLSHFFI Trigger: TATGAAGAAGTGTGACAAGGGAGCCATCAGTTGTGTAAATGTGCACATCTGCGATAGCCCTTTCCACTGCACTATGGAGGAAGCAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS CCA 90 bp | GTTGGAACCGATTCAACCAATGATCTTGCTTCCTCCATAGTGCAGTaGAAAGGGCTATCGCAGATGTGCACATTTACACAACTGATGGCT | + |
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Preference number: 5 (lower is better) Translates to: VGTDSTNDLASSIVQ*KGLSQMCTFTQLMA Trigger: AGCCATCAGTTGTGTAAATGTGCACATCTGCGATAGCCCTTTCCACTGCACTATGGAGGAAGCAAGATCATTGGTTGAATCGGTTCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR CAA 90 bp | TTAACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTGCCCGGCAAGCGAAAGCCTTGTTTTaGAATTCTCCATTAAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LTVMSDRKSSDGHPGARQAKALF*NSPLKA Trigger: TGCTTTTAATGGAGAATTCAAAAACAAGGCTTTCGC...TTGCCGGGCACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS TCA 90 bp | ATTGCTTTCCTTATTCATCGAAGGTGTTGGAACCGATTCAACCAATaGTCTTGCTTCCTCCATAGTGCAGTGGAAAGGGCTATCGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: IAFLIHRRCWNRFNQ*SCFLHSAVERAIAD Trigger: ATCTGCGATAGCCCTTTCCACTGCACTATGGAGGAAGCAAGATCATTGGTTGAATCGGTTCCAACACCTTCGATGAATAAGGAAAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS-3UTR CAA 90 bp | TTAAAAGTTTTAACAGTGATGTCTGACAGGAAGTCATCAGATGGCCATCCAGGTTCGAGGGCGAAAGCCTaGTTTTTGAATTCTCCATTA | + |
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Preference number: 5 (lower is better) Translates to: LKVLTVMSDRKSSDGHPGSRAKA*FLNSPL Trigger: TAATGGAGAATTCAAAAACAAGGCTTTCGCCCTCGA...ACCTGGATGGCCATCTGATGACTTCCTGTCAGACATCACTGTTAAAACTTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS CCA 90 bp | TACCTTATAGAGTCTAAACCAATTGAGAGTGGCTTCCAGGTAACCTaGTTTGAACTTCTTAACATCATCAATATCATGAAATTTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: YLIESKPIESGFQVT*FELLNIINIMKFFS Trigger: GCTGAAAAATTTCATGATATTGATGATGTTAAGAAGTTCAAACCAGGTTACCTGGAAGCCACTCTCAATTGGTTTAGACTCTATAAGGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS GCA 72 bp | AGACGTCAATGGGATCATTATCCCCACAGCAGTCGGTaGTCTTATCTCTTAGGTGAGGATCTTCCCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RRQWDHYPHSSR*SYLLGEDLPRS Trigger: AGACCTGGGAAGATCCTCACCTAAGAGATAAGAGCACCGACTGCTGTGGGGATAATGATCCCATTGACGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS CCA 72 bp | GGGAAAGAACCTTTGAGCCTATTTCACAGACGTCAATaGGATCATTATCCCCACAGCAGTCGGTGCTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: GKEPLSLFHRRQ*DHYPHSSRCSY Trigger: ATAAGAGCACCGACTGCTGTGGGGATAATGATCCCATTGACGTCTGTGAAATAGGCTCAAAGGTTCTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS TCA 72 bp | CTTATTCATCGAAGGTGTTGGAACCGATTCAACCAATaGTCTTGCTTCCTCCATAGTGCAGTGGAAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LIHRRCWNRFNQ*SCFLHSAVERA Trigger: AGCCCTTTCCACTGCACTATGGAGGAAGCAAGATCATTGGTTGAATCGGTTCCAACACCTTCGATGAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS GCA 72 bp | AGTTGCGGAGGAAGTGCCACACTTCTTCCTCTACATTaGTTTCCTTATTCATCGAAGGTGTTGGAACCGATT | + |
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Preference number: 6 (lower is better) Translates to: SCGGSATLLPLH*FPYSSKVLEPI Trigger: AATCGGTTCCAACACCTTCGATGAATAAGGAAAGCAATGTAGAGGAAGAAGTGTGGCACTTCCTCCGCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029644.16 |
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| CDS CAA 90 bp | AAAGGGCTATCGCAGATGTGCACATTTACACAACTGATGGCTCCCTaGTCACACTTCTTCATAACCATCTCTTTCCAACGTTCATGTGCA | + |
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Preference number: 6 (lower is better) Translates to: KGLSQMCTFTQLMAP*SHFFITISFQRSCA Trigger: TGCACATGAACGTTGGAAAGAGATGGTTATGAAGAAGTGTGACAAGGGAGCCATCAGTTGTGTAAATGTGCACATCTGCGATAGCCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS CCA 72 bp | GATTCAACCAATGATCTTGCTTCCTCCATAGTGCAGTaGAAAGGGCTATCGCAGATGTGCACATTTACACAA | + |
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Preference number: 6 (lower is better) Translates to: DSTNDLASSIVQ*KGLSQMCTFTQ Trigger: TTGTGTAAATGTGCACATCTGCGATAGCCCTTTCCACTGCACTATGGAGGAAGCAAGATCATTGGTTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS CAA 72 bp | TCGCAGATGTGCACATTTACACAACTGATGGCTCCCTaGTCACACTTCTTCATAACCATCTCTTTCCAACGT | + |
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Preference number: 6 (lower is better) Translates to: SQMCTFTQLMAP*SHFFITISFQR Trigger: ACGTTGGAAAGAGATGGTTATGAAGAAGTGTGACAAGGGAGCCATCAGTTGTGTAAATGTGCACATCTGCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029644.16 ENSMUST00000106315.4 ENSMUST00000122334.8 |
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| CDS CAA 72 bp | CTTCCTCTACATTGCTTTCCTTATTCATCGAAGGTGTaGGAACCGATTCAACCAATGATCTTGCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPLHCFPYSSKV*EPIQPMILLPP Trigger: TGGAGGAAGCAAGATCATTGGTTGAATCGGTTCCAACACCTTCGATGAATAAGGAAAGCAATGTAGAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029644.16 ENSMUST00000122334.8 |
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| CDS CAA 72 bp | TACCCTCTACATTGCTTTCCTTATTCATCGAAGGTGTaGGAACCGATTCAACCAATGATCTTGCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: YPLHCFPYSSKV*EPIQPMILLPP Trigger: TGGAGGAAGCAAGATCATTGGTTGAATCGGTTCCAACACCTTCGATGAATAAGGAAAGCAATGTAGAGGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106315.4 |
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