Pregenerated sensors for PP2D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044957Ensembl transcript IDs: ENSMUST00000056198.4
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CATAAAGTATACACCATAATACGCATGATATATAAGCTGCAGCTTTaGTATTTCCTTCCCGGTCTAAGGAATGGTTTTCACGGGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HKVYTIIRMIYKLQL*YFLPGLRNGFHGSL Trigger: AAGACTCCCGTGAAAACCATTCCTTAGACCGGGAAGGAAATACAAAAGCTGCAGCTTATATATCATGCGTATTATGGTGTATACTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCCTCTAATATACAAGTaGGTGCCGAGCAGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRPLIYK*VPSSRS Trigger: GGAGCGGCTGCTCGGCACTCACTTGTATATTAGAGG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGGACCAGTTTGGGCTTTaGTTGCCTCCCTCCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRDQFGL*LPPSHP Trigger: TGGATGGGAGGGAGGCAACCAAAGCCCAAACTGGTC...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTAAGAAGGCCTATAGGTaGCCAGGGTTTGCTTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVKKAYR*PGFAFR Trigger: CCTAAAAGCAAACCCTGGCCACCTATAGGCCTTCTT...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTTCGGATGTTACTGTCTaGTGGGGAAAGAAGGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVSDVTV*WGKKAY Trigger: ATAGGCCTTCTTTCCCCACCAGACAGTAACATCCGA...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTACTCTCTATGAAGACTaGCCAGTTTGGGCTTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVTLYED*PVWALV Trigger: AACCAAAGCCCAAACTGGTCAGTCTTCATAGAGAGT...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGGCCATAGGGGTCATCTaGACTGATCACTGCTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRAIGVI*TDHCFA Trigger: AGCGAAGCAGTGATCAGTTCAGATGACCCCTATGGC...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTGGAACCCCCTTCTATTaGAGCACTTACAAGTTCACA | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVGTPFY*STYKFT Trigger: TGTGAACTTGTAAGTGCTGCAATAGAAGGGGGTTCC...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGTCTGGAAGGGAAGACTaGTGGAACCCTGCTGATAGG | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRSGRED*WNPADR Trigger: CCTATCAGCAGGGTTCCACCAGTCTTCCCTTCCAGA...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTTCCAGATATGATCTGTaGAGTCTTCTGGAAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVSRYDL*SLLEGK Trigger: CTTCCCTTCCAGAAGACTCCACAGATCATATCTGGA...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTGTGTACTGTGTTCCTTaGTCAGGCAAAACCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVVYCVP*SGKTLF Trigger: GAAAAGGGTTTTGCCTGACCAAGGAACACAGTACAC...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCAGAGCAGGGGAATGTaGCCATGTCACCAGAAATCA | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRQSRGM*PCHQKS Trigger: TGATTTCTGGTGACATGGTCACATTCCCCTGCTCTG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGAAATCAGCTGCTCAGTaGAATCCTCCAGGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRKSAAQ*NPPGRW Trigger: CCATCGACCTGGAGGATTCCACTGAGCAGCTGATTT...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTCAGATGGTTGCTGTTTaGAGAATACGTAGAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVQMVAV*RIRRSL Trigger: GAGACTTCTACGTATTCTCCAAACAGCAACCATCTG...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTGTCTTTATTAGCATGTaGGTTCTTAATCCCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVVFISM*VLNPTL Trigger: GAGGGTGGGATTAAGAACCCACATGCTAATAAAGAC...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTAAGGAATTGATGAGTTaGTTCTGCTCAGCTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVKELMS*FCSAVI Trigger: AATGACAGCTGAGCAGAAGCAACTCATCAATTCCTT...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTATCCATTCTCCAAAATaGCTTTGCAAAGGCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVIHSPK*LCKGFV Trigger: CACAAAGCCTTTGCAAAGGCATTTTGGAGAATGGAT...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTGCCAATGTACTCAGCTaGACCTTTGTAGAAATTCTT | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVANVLS*TFVEIL Trigger: AAGAATTTCTACAAAGGTGCAGCTGAGTACATTGGC...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTCGAAAAAGCACACATTaGCCTTATCACCAAAATCGT | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVRKSTH*PYHQNR Trigger: ACGATTTTGGTGATAAGGCCAATGTGTGCTTTTTCG...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGATCTGTGGAGTCTTCTaGAAGGGAAGACTGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRICGVF*KGRLVE Trigger: TTCCACCAGTCTTCCCTTCCAGAAGACTCCACAGAT...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGGATGTTACTGTCTGGTaGGGAAAGAAGGCCTATAGG | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRDVTVW*GKKAYR Trigger: CCTATAGGCCTTCTTTCCCCACCAGACAGTAACATC...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGTCTTCATTTTCAGGCTaGTACTGGAACAGCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRSSFSG*YWNSTR Trigger: CCGAGTGCTGTTCCAGTACCAGCCTGAAAATGAAGA...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGTGGAGAAGTAAAACCTaGAACTCCTTTGATGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRWRSKT*NSFDAR Trigger: CCTGGCATCAAAGGAGTTTCAGGTTTTACTTCTCCA...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGGTAGTACTCCAGATATaGTCTGTGGAGTCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRVVLQI*SVESSG Trigger: TCCAGAAGACTCCACAGATCATATCTGGAGTACTAC...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCAAGGTGATTACCAGTaGAGTGACTTCCTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRQGDYQ*SDFLLV Trigger: GACAAGAAGGAAGTCACTGCACTGGTAATCACCTTG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCTCCGCTTTCCAGGCTaGATTATTATTGCTACAGAT | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRLRFPG*IIIATD Trigger: ATCTGTAGCAATAATAATTCAGCCTGGAAAGCGGAG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCGTCCCATCTGCAGTTaGCATAATGTCTTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRRPICS*HNVFIF Trigger: GAAAATGAAGACATTATGTCAACTGCAGATGGGACG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTAGGCTGAATTATTATTaGTACAGATGGCTATACCTT | + |
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Preference number: 4 (lower is better) Translates to: VFTGVFVALFAVLGHWNVRLNYY*YRWLYL Trigger: AAGGTATAGCCATCTGTAGCAATAATAATTCAGCCT...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGACCCTTTTCCATTTCTaGATAAGACTGCTTGCACGT | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRTLFHF*IRLLAR Trigger: ACGTGCAAGCAGTCTTATGCAGAAATGGAAAAGGGT...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| 3UTR CAA 72 bp | TACACCATAATACGCATGATATATAAGCTGCAGCTTTaGTATTTCCTTCCCGGTCTAAGGAATGGTTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: YTIIRMIYKLQL*YFLPGLRNGFH Trigger: GTGAAAACCATTCCTTAGACCGGGAAGGAAATACAAAAGCTGCAGCTTATATATCATGCGTATTATGGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGTGCTATTTTCTTTTGTaGTACAAGGGTCATAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRCYFLL*YKGHKG Trigger: CCCCTTATGACCCTTGTAGCACAAAAGAAAATAGCA...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR TCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGATCAGAAGTAAATGTTaGAGTTTTCTCATCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRIRSKC*SFLIPH Trigger: GTGTGGGATGAGAAAACTTCAACATTTACTTCTGAT...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR GCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCCAAAGAAACTCAAATaGGTAGTTCACATTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRPKKLK*VVHIVK Trigger: CTTCACAATGTGAACTACGCATTTGAGTTTCTTTGG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCCTTTAATCATCAGATaGTTGCTGTTTGGAGAATAC | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRPLIIR*LLFGEY Trigger: GTATTCTCCAAACAGCAACCATCTGATGATTAAAGG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CCA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCTCTTCTTCTTTCTTTaGTGTTTCGTGTACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRLFFFL*CFVYCV Trigger: AACACAGTACACGAAACACCAAAGAAAGAAGAAGAG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 90 bp | ATTTTCAGGCTGGTACTGGAACAGCACTCGGATGTTACTGTCTGGTaGGGAAAGAAGGCCTATAGGTGGCCAGGGTTTGCTTTTAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: IFRLVLEQHSDVTVW*GKKAYRWPGFAFRA Trigger: CGCCCTAAAAGCAAACCCTGGCCACCTATAGGCCTTCTTTCCCCACCAGACAGTAACATCCGAGTGCTGTTCCAGTACCAGCCTGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS TCA 90 bp | CTGCTTGCACGTTTCCAGCATTTGCCAGGTGTAGTACTCCAGATATaGTCTGTGGAGTCTTCTGGAAGGGAAGACTGGTGGAACCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LLARFQHLPGVVLQI*SVESSGREDWWNPA Trigger: AGCAGGGTTCCACCAGTCTTCCCTTCCAGAAGACTCCACAGATCATATCTGGAGTACTACACCTGGCAAATGCTGGAAACGTGCAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS TCA 90 bp | CCGGGTGGTTTTGATGTGCCCATCCAGGAGGCCATAGGGGTCATCTaGACTGATCACTGCTTCGCTGTAAAGGACTCTTCTTCTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: PGGFDVPIQEAIGVI*TDHCFAVKDSSSFF Trigger: AAAGAAAGAAGAAGAGTCCTTTACAGCGAAGCAGTGATCAGTTCAGATGACCCCTATGGCCTCCTGGATGGGCACATCAAAACCACCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 90 bp | CAGCACTCGGATGTTACTGTCTGGTGGGGAAAGAAGGCCTATAGGTaGCCAGGGTTTGCTTTTAGGGCGAGGAACATGGGTTTCTTTATA | + |
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Preference number: 5 (lower is better) Translates to: QHSDVTVWWGKKAYR*PGFAFRARNMGFFI Trigger: TATAAAGAAACCCATGTTCCTCGCCCTAAAAGCAAACCCTGGCCACCTATAGGCCTTCTTTCCCCACCAGACAGTAACATCCGAGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 90 bp | CCTTTCGTCCCATCTGCAGTTGACATAATGTCTTCATTTTCAGGCTaGTACTGGAACAGCACTCGGATGTTACTGTCTGGTGGGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: PFVPSAVDIMSSFSG*YWNSTRMLLSGGER Trigger: TCTTTCCCCACCAGACAGTAACATCCGAGTGCTGTTCCAGTACCAGCCTGAAAATGAAGACATTATGTCAACTGCAGATGGGACGAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 90 bp | TCCTTGGTCAGGCAAAACCCTTTTCCATTTCTGCATAAGACTGCTTaGACGTTTCCAGCATTTGCCAGGTGTAGTACTCCAGATATGATC | + |
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Preference number: 5 (lower is better) Translates to: SLVRQNPFPFLHKTA*TFPAFARCSTPDMI Trigger: GATCATATCTGGAGTACTACACCTGGCAAATGCTGGAAACGTGCAAGCAGTCTTATGCAGAAATGGAAAAGGGTTTTGCCTGACCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 90 bp | TTCGTGTACTGTGTTCCTTGGTCAGGCAAAACCCTTTTCCATTTCTaGATAAGACTGCTTGCACGTTTCCAGCATTTGCCAGGTGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: FVYCVPWSGKTLFHF*IRLLARFQHLPGVV Trigger: TACTACACCTGGCAAATGCTGGAAACGTGCAAGCAGTCTTATGCAGAAATGGAAAAGGGTTTTGCCTGACCAAGGAACACAGTACACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCAGTTTGGGCTTTGGTaGCCTCCCTCCCATCCACTG | + |
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Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRQFGLW*PPSHPL Trigger: CAGTGGATGGGAGGGAGGCAACCAAAGCCCAAACTG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTAAACCTGAAACTCCTTaGATGCCAGGTCTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: VFTGVFVALFAVLGHWNVKPETP*MPGLLL Trigger: CAGCAGCAGACCTGGCATCAAAGGAGTTTCAGGTTT...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 90 bp | AAACATTACCATAACAGTGATGCTGTCTCTGGAACCCCCTTCTATTaGAGCACTTACAAGTTCACAGCCAATGTACTCAGCTGCACCTTT | + |
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Preference number: 5 (lower is better) Translates to: KHYHNSDAVSGTPFY*STYKFTANVLSCTF Trigger: AAAGGTGCAGCTGAGTACATTGGCTGTGAACTTGTAAGTGCTGCAATAGAAGGGGGTTCCAGAGACAGCATCACTGTTATGGTAATGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTCGTGTACTGTGTTCCTaGGTCAGGCAAAACCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: VFTGVFVALFAVLGHWNVRVLCS*VRQNPF Trigger: AAAAGGGTTTTGCCTGACCAAGGAACACAGTACACG...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS TCA 90 bp | CAGGGTTTGCTTTTAGGGCGAGGAACATGGGTTTCTTTATATGCATaGAACAAGGTGATTACCAGTGCAGTGACTTCCTTCTTGTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: QGLLLGRGTWVSLYA*NKVITSAVTSFLSK Trigger: TTTGGACAAGAAGGAAGTCACTGCACTGGTAATCACCTTGTTTCATGCATATAAAGAAACCCATGTTCCTCGCCCTAAAAGCAAACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTCTTCTTGTCCAAAACTaGCCAAAGTCCATTAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: VFTGVFVALFAVLGHWNVLLVQN*PKSISG Trigger: GCCACTAATGGACTTTGGCAAGTTTTGGACAAGAAG...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS TCA 90 bp | TTGTCCAAAACTTGCCAAAGTCCATTAGTGGCTAAGATGAGAAACTaGCATAGATCATCTATAGGGACAGAGATTGTTTGCGGTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LSKTCQSPLVAKMRN*HRSSIGTEIVCGAG Trigger: TCCAGCACCGCAAACAATCTCTGTCCCTATAGATGATCTATGTCAGTTTCTCATCTTAGCCACTAATGGACTTTGGCAAGTTTTGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 90 bp | AAAGGACTCTTCTTCTTTCTTTGGTGTTTCGTGTACTGTGTTCCTTaGTCAGGCAAAACCCTTTTCCATTTCTGCATAAGACTGCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: KGLFFFLWCFVYCVP*SGKTLFHFCIRLLA Trigger: TGCAAGCAGTCTTATGCAGAAATGGAAAAGGGTTTTGCCTGACCAAGGAACACAGTACACGAAACACCAAAGAAAGAAGAAGAGTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTAAAGGAATTGATGAGTaGCTTCTGCTCAGCTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: VFTGVFVALFAVLGHWNVKGIDE*LLLSCH Trigger: ATGACAGCTGAGCAGAAGCAACTCATCAATTCCTTT...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTCAGGCTGAATTATTATaGCTACAGATGGCTATACCT | + |
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Preference number: 5 (lower is better) Translates to: VFTGVFVALFAVLGHWNVQAELL*LQMAIP Trigger: AGGTATAGCCATCTGTAGCAATAATAATTCAGCCTG...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGGCCTTTGCAAAGGCTTaGTGTGTATCCTCATACTCC | + |
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Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRAFAKA*CVSSYS Trigger: GGAGTATGAGGATACACACAAAGCCTTTGCAAAGGC...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | GTTTTCACGGGAGTCTTTGTAGCACTGTTTGCTGTTCTAGGTCATTGGAATGTTACTCTTCTTCTTTCTTaGGTGTTTCGTGTACTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VFTGVFVALFAVLGHWNVTLLLS*VFRVLC Trigger: ACACAGTACACGAAACACCAAAGAAAGAAGAAGAGT...AACATTCCAATGACCTAGAACAGCAAACAGTGCTACAAAGACTCCCGTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGTGGAACCCCCTTCTATaGCAGCACTTACAAGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRWNPLL*QHLQVH Trigger: GTGAACTTGTAAGTGCTGCAATAGAAGGGGGTTCCA...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 90 bp | AGGAACATGGGTTTCTTTATATGCATGAAACAAGGTGATTACCAGTaGAGTGACTTCCTTCTTGTCCAAAACTTGCCAAAGTCCATTAGT | + |
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Preference number: 5 (lower is better) Translates to: RNMGFFICMKQGDYQ*SDFLLVQNLPKSIS Trigger: ACTAATGGACTTTGGCAAGTTTTGGACAAGAAGGAAGTCACTGCACTGGTAATCACCTTGTTTCATGCATATAAAGAAACCCATGTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCCGAAAAAGCACACATaGGCCTTATCACCAAAATCG | + |
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Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRPKKHT*ALSPKS Trigger: CGATTTTGGTGATAAGGCCAATGTGTGCTTTTTCGG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCTAGTTCTGAAGGTTTaGTATGTGGAAGAGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRLVLKV*YVEEKA Trigger: GGCCTTCTCTTCCACATACAAAACCTTCAGAACTAG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGGCAGTGACTTCCTTCTaGTCCAAAACTTGCCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRAVTSF*SKTCQS Trigger: ACTTTGGCAAGTTTTGGACAAGAAGGAAGTCACTGC...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCATAAGGGGTCACTTTaGGAGAAAATGTACCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRHKGSL*EKMYPD Trigger: ATCAGGGTACATTTTCTCCAAAAGTGACCCCTTATG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGTCTCATCCCACACTTTaGATCTCCAAAACACTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRSHPTL*ISKTLL Trigger: TAAGAGTGTTTTGGAGATCAAAAGTGTGGGATGAGA...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGCTTTTGCCAACCATTTaGCCAATCTTGAGATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRLLPTI*PILRFS Trigger: TGAGAATCTCAAGATTGGCAAAATGGTTGGCAAAAG...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS-3UTR CAA 90 bp | AGAACTTGTACATTTTACAGTAACTCAAAACTAGTAAGGAGAACAGTTCACCGGTTAATCATCAGATGGTaGCTGTTTGGAGAATACGTA | + |
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Preference number: 5 (lower is better) Translates to: RTCTFYSNSKLVRRTVHRLIIRW*LFGEYV Trigger: TACGTATTCTCCAAACAGCAACCATCTGATGATTAA...CCGGTGAACTGTTCTCCTTACTAGTTTTGAGTTACTGTAAAATGTACAAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 72 bp | GAGCAGGGGAATGTGACCATGTCACCAGAAATCAGCTaGTCAGTGGAATCCTCCAGGTCGATGGAGCGCTTT | + |
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Preference number: 6 (lower is better) Translates to: EQGNVTMSPEIS*SVESSRSMERF Trigger: AAAGCGCTCCATCGACCTGGAGGATTCCACTGAGCAGCTGATTTCTGGTGACATGGTCACATTCCCCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 72 bp | CTGGTACTGGAACAGCACTCGGATGTTACTGTCTGGTaGGGAAAGAAGGCCTATAGGTGGCCAGGGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LVLEQHSDVTVW*GKKAYRWPGFA Trigger: AGCAAACCCTGGCCACCTATAGGCCTTCTTTCCCCACCAGACAGTAACATCCGAGTGCTGTTCCAGTACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 72 bp | AGGCTGGTACTGGAACAGCACTCGGATGTTACTGTCTaGTGGGGAAAGAAGGCCTATAGGTGGCCAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RLVLEQHSDVTV*WGKKAYRWPGF Trigger: AAACCCTGGCCACCTATAGGCCTTCTTTCCCCACCAGACAGTAACATCCGAGTGCTGTTCCAGTACCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 72 bp | GATGTTACTGTCTGGTGGGGAAAGAAGGCCTATAGGTaGCCAGGGTTTGCTTTTAGGGCGAGGAACATGGGT | + |
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Preference number: 6 (lower is better) Translates to: DVTVWWGKKAYR*PGFAFRARNMG Trigger: ACCCATGTTCCTCGCCCTAAAAGCAAACCCTGGCCACCTATAGGCCTTCTTTCCCCACCAGACAGTAACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 72 bp | ACACTCTCTATGAAGACTGACCAGTTTGGGCTTTGGTaGCCTCCCTCCCATCCACTGGAAACCCAGCATACT | + |
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Preference number: 6 (lower is better) Translates to: TLSMKTDQFGLW*PPSHPLETQHT Trigger: AGTATGCTGGGTTTCCAGTGGATGGGAGGGAGGCAACCAAAGCCCAAACTGGTCAGTCTTCATAGAGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS TCA 72 bp | TGTTCAGTTCTCGGTAGCAGACAGAGCAGGGGAATGTaGCCATGTCACCAGAAATCAGCTGCTCAGTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: CSVLGSRQSRGM*PCHQKSAAQWN Trigger: ATTCCACTGAGCAGCTGATTTCTGGTGACATGGTCACATTCCCCTGCTCTGTCTGCTACCGAGAACTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS TCA 72 bp | CGTTTCCAGCATTTGCCAGGTGTAGTACTCCAGATATaGTCTGTGGAGTCTTCTGGAAGGGAAGACTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RFQHLPGVVLQI*SVESSGREDWW Trigger: CCACCAGTCTTCCCTTCCAGAAGACTCCACAGATCATATCTGGAGTACTACACCTGGCAAATGCTGGAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS TCA 72 bp | TGTGCCCATCCAGGAGGCCATAGGGGTCATCTGAACTaGTCACTGCTTCGCTGTAAAGGACTCTTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CAHPGGHRGHLN*SLLRCKGLFFF Trigger: AAAGAAGAAGAGTCCTTTACAGCGAAGCAGTGATCAGTTCAGATGACCCCTATGGCCTCCTGGATGGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 72 bp | TCTGGTGGGGAAAGAAGGCCTATAGGTGGCCAGGGTTaGCTTTTAGGGCGAGGAACATGGGTTTCTTTATAT | + |
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Preference number: 6 (lower is better) Translates to: SGGERRPIGGQG*LLGRGTWVSLY Trigger: ATATAAAGAAACCCATGTTCCTCGCCCTAAAAGCAAACCCTGGCCACCTATAGGCCTTCTTTCCCCACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 90 bp | AGAGATTATACACTCTCTATGAAGACTGACCAGTTTGGGCTTTGGTaGCCTCCCTCCCATCCACTGGAAACCCAGCATACTCAGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: RDYTLSMKTDQFGLW*PPSHPLETQHTQSI Trigger: AATGCTCTGAGTATGCTGGGTTTCCAGTGGATGGGAGGGAGGCAACCAAAGCCCAAACTGGTCAGTCTTCATAGAGAGTGTATAATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 90 bp | GGCTCTGTATTCCTCCCTGAACACCGTGTCAAAGGAATTGATGAGTaGCTTCTGCTCAGCTGTCATTTGGTAGGAAGGATCCTGTATAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSVFLPEHRVKGIDE*LLLSCHLVGRILYR Trigger: TCTATACAGGATCCTTCCTACCAAATGACAGCTGAGCAGAAGCAACTCATCAATTCCTTTGACACGGTGTTCAGGGAGGAATACAGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 72 bp | CATAACAGTGATGCTGTCTCTGGAACCCCCTTCTATTaGAGCACTTACAAGTTCACAGCCAATGTACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: HNSDAVSGTPFY*STYKFTANVLS Trigger: GCTGAGTACATTGGCTGTGAACTTGTAAGTGCTGCAATAGAAGGGGGTTCCAGAGACAGCATCACTGTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 72 bp | GCAGTTGACATAATGTCTTCATTTTCAGGCTGGTACTaGAACAGCACTCGGATGTTACTGTCTGGTGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: AVDIMSSFSGWY*NSTRMLLSGGE Trigger: TTCCCCACCAGACAGTAACATCCGAGTGCTGTTCCAGTACCAGCCTGAAAATGAAGACATTATGTCAACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 72 bp | GTATCCTCATACTCCCGTCTACTAGTTCTGAAGGTTTaGTATGTGGAAGAGAAGGCCTCTTCTCTGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VSSYSRLLVLKV*YVEEKASSLAL Trigger: CAGAGCCAGAGAAGAGGCCTTCTCTTCCACATACAAAACCTTCAGAACTAGTAGACGGGAGTATGAGGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 72 bp | AGGCAAAACCCTTTTCCATTTCTGCATAAGACTGCTTaGACGTTTCCAGCATTTGCCAGGTGTAGTACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RQNPFPFLHKTA*TFPAFARCSTP Trigger: TGGAGTACTACACCTGGCAAATGCTGGAAACGTGCAAGCAGTCTTATGCAGAAATGGAAAAGGGTTTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 72 bp | CCATCTGCAGTTGACATAATGTCTTCATTTTCAGGCTaGTACTGGAACAGCACTCGGATGTTACTGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSAVDIMSSFSG*YWNSTRMLLSG Trigger: ACCAGACAGTAACATCCGAGTGCTGTTCCAGTACCAGCCTGAAAATGAAGACATTATGTCAACTGCAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 90 bp | AGCCGTAGAAGCCTATCCATTCTCCAAAATGCCTTTGCAAAGGCTTaGTGTGTATCCTCATACTCCCGTCTACTAGTTCTGAAGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRRSLSILQNAFAKA*CVSSYSRLLVLKVL Trigger: CAAAACCTTCAGAACTAGTAGACGGGAGTATGAGGATACACACAAAGCCTTTGCAAAGGCATTTTGGAGAATGGATAGGCTTCTACGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS TCA 72 bp | GAAGATCTCAAAAGGTTAGAGATTATACACTCTCTATaGAGACTGACCAGTTTGGGCTTTGGTTGCCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EDLKRLEIIHSL*RLTSLGFGCLP Trigger: AGGGAGGCAACCAAAGCCCAAACTGGTCAGTCTTCATAGAGAGTGTATAATCTCTAACCTTTTGAGATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 90 bp | TCGATGGAGCGCTTTGGTCTAGGCCTTCTCCTTTTGCCAACCATTTaGCCAATCTTGAGATTCTCATCAGAAGTAAATGTTGAAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMERFGLGLLLLPTI*PILRFSSEVNVEVF Trigger: GAAAACTTCAACATTTACTTCTGATGAGAATCTCAAGATTGGCAAAATGGTTGGCAAAAGGAGAAGGCCTAGACCAAAGCGCTCCATCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 72 bp | TTTGCTTTTAGGGCGAGGAACATGGGTTTCTTTATATaGATGAAACAAGGTGATTACCAGTGCAGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: FAFRARNMGFFI*MKQGDYQCSDF Trigger: GAAGTCACTGCACTGGTAATCACCTTGTTTCATGCATATAAAGAAACCCATGTTCCTCGCCCTAAAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 72 bp | TTACAGTTCGGCTCCGCTTTCCAGGCTGAATTATTATaGCTACAGATGGCTATACCTTTAATCATCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: LQFGSAFQAELL*LQMAIPLIIRW Trigger: CCATCTGATGATTAAAGGTATAGCCATCTGTAGCAATAATAATTCAGCCTGGAAAGCGGAGCCGAACTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CAA 90 bp | ACCGTGAATTTACAGTTCGGCTCCGCTTTCCAGGCTGAATTATTATaGCTACAGATGGCTATACCTTTAATCATCAGATGGTTGCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TVNLQFGSAFQAELL*LQMAIPLIIRWLLF Trigger: AAACAGCAACCATCTGATGATTAAAGGTATAGCCATCTGTAGCAATAATAATTCAGCCTGGAAAGCGGAGCCGAACTGTAAATTCACGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS GCA 72 bp | GGTTTCTTTATATGCATGAAACAAGGTGATTACCAGTaGAGTGACTTCCTTCTTGTCCAAAACTTGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GFFICMKQGDYQ*SDFLLVQNLPK Trigger: CTTTGGCAAGTTTTGGACAAGAAGGAAGTCACTGCACTGGTAATCACCTTGTTTCATGCATATAAAGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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| CDS CCA 72 bp | TTATTGCTACAGATGGCTATACCTTTAATCATCAGATaGTTGCTGTTTGGAGAATACGTAGAAGTCTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLQMAIPLIIR*LLFGEYVEVSP Trigger: TGGCGAGACTTCTACGTATTCTCCAAACAGCAACCATCTGATGATTAAAGGTATAGCCATCTGTAGCAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056198.4 |
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