Pregenerated sensors for POU6F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009734Ensembl transcript IDs: ENSMUST00000139064.10, ENSMUST00000175703.9, ENSMUST00000176795.8, ENSMUST00000184299.2
Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCACTCCCAATAAATTCCGTGAGATTCTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GSLPINSVRFCIPAR*RASASAIHRSSTGL Trigger: CAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGGGAGTGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR GCA 90 bp | TTTGGATGGCTCACTCCCAATAAATTCCGTGAGATTCTGCATACCTaGTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: FGWLTPNKFREILHT*SMAGLSLSHPPLKH Trigger: GTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGGGAGTGAGCCATCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR GCA 90 bp | TTGCGCTTTTTGGATGGCTCACTCCCAATAAATTCCGTGAGATTCTaGATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCACCGC | + |
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Preference number: 1 (lower is better) Translates to: LRFLDGSLPINSVRF*IPARWRASASAIHR Trigger: GCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGGGAGTGAGCCATCCAAAAAGCGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR GCA 90 bp | CGAGCAGTAGCGTTTGCAGTGGTTCCGACTTTGGTTAAAAGGGTTTaGAGCGAGCAGCACTTAGTCCCTGAAGGGATGCAGTGCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: RAVAFAVVPTLVKRV*SEQHLVPEGMQCSS Trigger: GGAGGAGCACTGCATCCCTTCAGGGACTAAGTGCTGCTCGCTGCAAACCCTTTTAACCAAAGTCGGAACCACTGCAAACGCTACTGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTaGGTGTTGACAGTCGTTCAGCAGATAGACCTAGTTATCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: IPISGVDRERSSSLC*VLTVVQQIDLVILE Trigger: CTCCAGGATAACTAGGTCTATCTGCTGAACGACTGTCAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CCA 90 bp | AGCGAGCAGCACTTAGTCCCTGAAGGGATGCAGTGCTCCTCCAGGTaGCAGACTTGCATTCGCTTTGAACAGATACGAGTTTGTGTTGGC | + |
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Preference number: 1 (lower is better) Translates to: SEQHLVPEGMQCSSR*QTCIRFEQIRVCVG Trigger: GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGAGCACTGCATCCCTTCAGGGACTAAGTGCTGCTCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR GCA 90 bp | AAAATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTaGTGGGTGTTGACAGTCGTTCAGCAGATAGACCTAGTTATCCTG | + |
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Preference number: 1 (lower is better) Translates to: KIPISGVDRERSSSL*WVLTVVQQIDLVIL Trigger: CAGGATAACTAGGTCTATCTGCTGAACGACTGTCAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CCA 90 bp | CTGCTAGCTATAGTGTTCTCTTGGGCTTCCTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: LLAIVFSWASCGRKK*LLRMVCLQMADWLY Trigger: ATACAGCCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGAGAACACTATAGCTAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR TCA 90 bp | TCAGGCTTGCTTTATTTTGTGAATGGTTGTTTGGAGATTTCCGTCTaGTTCCAGCCCACACAGCAGCCTCCGTGTGTCACTGAAGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SGLLYFVNGCLEISV*FQPTQQPPCVTEGG Trigger: GCCACCTTCAGTGACACACGGAGGCTGCTGTGTGGGCTGGAATCAGACGGAAATCTCCAAACAACCATTCACAAAATAAAGCAAGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
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| 3UTR CCA 90 bp | CCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PGFSLAVRLLAIVFS*ASCGRKKWLLRMVC Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR GCA 90 bp | GGTTTCTGGGTTGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATaGTACCAGGATGTTGTTGGCACTAATCGGGCTGGTTGTGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: GFWVAGICAVFAVVK*YQDVVGTNRAGCGP Trigger: TGGACCACAACCAGCCCGATTAGTGCCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCAACCCAGAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR TCA 90 bp | CAAAAGGAAGCTACTTCATCTGCTAAGAAGCAAATTGGTAGACAGTaGGCCACACAGAGTGATTTCAACAATGGCATTCACCCTGGCGGC | + |
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Preference number: 1 (lower is better) Translates to: QKEATSSAKKQIGRQ*ATQSDFNNGIHPGG Trigger: GCCGCCAGGGTGAATGCCATTGTTGAAATCACTCTGTGTGGCTCACTGTCTACCAATTTGCTTCTTAGCAGATGAAGTAGCTTCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR TCA 90 bp | TTCTCAAACCTACAACTCATAGTGAGAAGAAAGCCACGAGTGCTTTaGCACACCACCATCCATGTTGTTTCTCCACTCCACCATCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: FSNLQLIVRRKPRVL*HTTIHVVSPLHHLP Trigger: AGGCAGATGGTGGAGTGGAGAAACAACATGGATGGTGGTGTGTCAAAGCACTCGTGGCTTTCTTCTCACTATGAGTTGTAGGTTTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR TCA 90 bp | GTTTCGGTTTCTGGGTTGCTGGTATTTGTGCAGTTTTTGCAGTTGTaGAATGCTACCAGGATGTTGTTGGCACTAATCGGGCTGGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: VSVSGLLVFVQFLQL*NATRMLLALIGLVV Trigger: CACAACCAGCCCGATTAGTGCCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCAACCCAGAAACCGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR TCA 90 bp | CAACATTTAGCCATATCTACACAATGTGCATATTCCTACACATGCTaGGCTTTGGTCCAGCGCAGAGAAGAGAGCAAAGGCAATTGGATT | + |
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Preference number: 1 (lower is better) Translates to: QHLAISTQCAYSYTC*ALVQRREESKGNWI Trigger: AATCCAATTGCCTTTGCTCTCTTCTCTGCGCTGGACCAAAGCTCAGCATGTGTAGGAATATGCACATTGTGTAGATATGGCTAAATGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR GCA 90 bp | CCAGAGCCTAGTTCCAATTGCTTAAATTTGCCTGTCACATTTCTATaGCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATG | + |
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Preference number: 1 (lower is better) Translates to: PEPSSNCLNLPVTFL*HLYSPRTDVPQLQM Trigger: CATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATTTAAGCAATTGGAACTAGGCTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CCA 90 bp | TTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATCCAGTTTaGCTTCTTGGTCACGAGTCTATCATGTCAATGTCTCGTCGGCAT | + |
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Preference number: 1 (lower is better) Translates to: LVSMFQQVRSFQYPV*LLGHESIMSMSRRH Trigger: ATGCCGACGAGACATTGACATGATAGACTCGTGACCAAGAAGCCAAACTGGATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR TCA 90 bp | GTGGGCTATCTCTTCCCCTTTCATGATTTGCCTCTAGATAGTACATaGGCATGCTTTTTAATTACTCATGAGTATTTATTTATGTTGATG | + |
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Preference number: 1 (lower is better) Translates to: VGYLFPFHDLPLDST*ACFLITHEYLFMLM Trigger: CATCAACATAAATAAATACTCATGAGTAATTAAAAAGCATGCTCATGTACTATCTAGAGGCAAATCATGAAAGGGGAAGAGATAGCCCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR TCA 90 bp | GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGGCCCTCTGTGGCACTaGGGGCTTGTCCCACCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ASCGRKKWLLRMVCLQMAGPLWH*GLVPPE Trigger: CTCAGGTGGGACAAGCCCTCAGTGCCACAGAGGGCC...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCGGCCGACTGGCTGTATaGGGGGCCCTCTGTGGCACT | + |
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Preference number: 2 (lower is better) Translates to: KPGRIQKARVQFGCQTASGRLAV*GALCGT Trigger: AGTGCCACAGAGGGCCCCGCATACAGCCAGTCGGCC...GCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR CAA 90 bp | TCACGCAGAGGCGAGCGAGCAGTAGCGTTTGCAGTGGTTCCGACTTaGGTTAAAAGGGTTTGCAGCGAGCAGCACTTAGTCCCTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SRRGERAVAFAVVPT*VKRVCSEQHLVPEG Trigger: CCCTTCAGGGACTAAGTGCTGCTCGCTGCAAACCCTTTTAACCAAAGTCGGAACCACTGCAAACGCTACTGCTCGCTCGCCTCTGCGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CAA 90 bp | ATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTaGACAGTCGTTCAGCAGATAGACCTAGTTATCCTGGAGTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: ISGVDRERSSSLCWV*TVVQQIDLVILECL Trigger: GAGACACTCCAGGATAACTAGGTCTATCTGCTGAACGACTGTCAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGTCCAGGTGGCAGACTTaGATTCGCTTTGAACAGATA | + |
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Preference number: 2 (lower is better) Translates to: IPISGVDRERSSSLCWVLSRWQT*IRFEQI Trigger: TATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGA...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR GCA 90 bp | TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTATCAGGATGGTGTGTCTaGAGATGGCCGACTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SNLAGYKRPGFSLAVRLLSGWCV*RWPTGC Trigger: ACAGCCAGTCGGCCATCTGCAGACACACCATCCTGA...TAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGAGGTGGGCTCGTGTTGCTTTAAGCGTTTGATTGTGTTCTTTAGAGCTTGTGAGATTCTGCATACCTaGTCGATGGCGGGCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: AEVGSCCFKRLIVFFRACEILHT*SMAGLS Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTC...ACAAGCTCTAAAGAACACAATCAAACGCTTAAAGCAACACGAGCCCACCTCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGAGGTGGGCTCGTGTTGCTTTAAGCGTTTGATTGTGTTCTTTAGAGCTTGTTGGTGTGTCTGCAGATaGCCGACTGGCTGTATGCGG | + |
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Preference number: 2 (lower is better) Translates to: AEVGSCCFKRLIVFFRACWCVCR*PTGCMR Trigger: CCGCATACAGCCAGTCGGCCATCTGCAGACACACCA...ACAAGCTCTAAAGAACACAATCAAACGCTTAAAGCAACACGAGCCCACCTCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCCAATAAATTCCGTGAGATTCTGCATACCTGCTCGATGGCGGGCCTCAGCACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG | + |
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Preference number: 2 (lower is better) Translates to: TPNKFREILHTCSMAGLSTGLIF*ALLGVM Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACACCTGAAGGGATGCAGTaGTCCTCCAGGTGGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: QEQMYPSSKCLSTLSDETPEGMQ*SSRWQT Trigger: AGTCTGCCACCTGGAGGAGCACTGCATCCCTTCAGG...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CAA 90 bp | TCCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCTATAGTGTTCTCTTGGGCTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SSFSNLAGYKRPGFS*AVRLLAIVFSWASC Trigger: ACAGGAAGCCCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR CAA 90 bp | TTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAATGGTaGTTTGGAGATTTCCGTCTGATTCCAGCCCACACAGCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: FIREAAFRLALFCEW*FGDFRLIPAHTAAS Trigger: GGAGGCTGCTGTGTGGGCTGGAATCAGACGGAAATCTCCAAACAACCATTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGCTTCTCAGCAATCTCGGTCATTTCCTGCCCTGAGGGGTGTGTGTTCTTCTGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LASQQSRSFPALRGVCSSAIVFS*ASCGRK Trigger: TTTCCTACCACAGGAAGCCCAAGAGAACACTATAGC...AGAAGAACACACACCCCTCAGGGCAGGAAATGACCGAGATTGCTGAGAAGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| 3UTR CAA 90 bp | TTTCTCAAACCTACAACTCATAGTGAGAAGAAAGCCACGAGTGCTTaGACACACCACCATCCATGTTGTTTCTCCACTCCACCATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FLKPTTHSEKKATSA*THHHPCCFSTPPSA Trigger: GGCAGATGGTGGAGTGGAGAAACAACATGGATGGTGGTGTGTCAAAGCACTCGTGGCTTTCTTCTCACTATGAGTTGTAGGTTTGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATGCTACCAGGATGTTGTTGGGCTCCTTCCCACCTCTaGTATCTTCCAGAAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: CWYLCSFCSCEMLPGCCWAPSHL*YLPEDP Trigger: GGGATCTTCTGGAAGATAGCAGAGGTGGGAAGGAGC...CCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACATGTCTCCTGCATTTTTaGAGGATGGGAGTGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QEQMYPSSKCLSTLSDETCLLHF*RMGVGK Trigger: CTTCCCCACTCCCATCCTGCAAAAATGCAGGAGACA...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CAA 90 bp | GCAGAGAAGAGAGCAAAGGCAATTGGATTTCTTTTTGGTTACAGCTaGAGTTCTTTGAGACGCCTCTACTTGTTTGGTTCTGCCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: AEKRAKAIGFLFGYS*SSLRRLYLFGSASP Trigger: GGGAGAGGCAGAACCAAACAAGTAGAGGCGTCTCAAAGAACTCAAGCTGTAACCAAAAAGAAATCCAATTGCCTTTGCTCTCTTCTCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR GCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGTTTGATAGAACCCTCTaGCCTCACCTGGGTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: VTLVTSLDHSTEDEIINQFDRTL*PHLGEK Trigger: TTTTTCACCCAGGTGAGGGCAGAGGGTTCTATCAAA...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACAGAGGAAAGGGAGGTGTaGGCTCCATTTTCTTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: QEQMYPSSKCLSTLSDETEEREV*APFSFS Trigger: TGAGAAAGAAAATGGAGCCCACACCTCCCTTTCCTC...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CAA 90 bp | AGAGCAAAGGCAATTGGATTTCTTTTTGGTTACAGCTTGAGTTCTTaGAGACGCCTCTACTTGTTTGGTTCTGCCTCTCCCAGCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: RAKAIGFLFGYSLSS*RRLYLFGSASPSSL Trigger: CAAAGAGCTGGGAGAGGCAGAACCAAACAAGTAGAGGCGTCTCAAAGAACTCAAGCTGTAACCAAAAAGAAATCCAATTGCCTTTGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR TCA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATGCAGCACTTAGTCCCTaGAGGGATGCAGTGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ADKSALVSMFQQVRSFQYAALSP*RDAVLL Trigger: GAGGAGCACTGCATCCCTTCAGGGACTAAGTGCTGC...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTAACAGGCGAGAAAGATaGGAGAAAGCGGGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSNRRER*EKAGFP Trigger: TGGGAAGCCCGCTTTCTCCCATCTTTCTCGCCTGTT...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR TCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGCACAGATGTAAGTATTaGACCATATGTGCAGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: VTLVTSLDHSTEDEIINQHRCKY*TICAAY Trigger: ATAAGCTGCACATATGGTTCAATACTTACATCTGTG...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR CCA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTACAGTGCTCCTCCAGGTaGCAGACTTGCATTCGCTTT | + |
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Preference number: 2 (lower is better) Translates to: IGCHVSSIMKKMKMTTILQCSSR*QTCIRF Trigger: AAAGCGAATGCAAGTCTGCCACCTGGAGGAGCACTG...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR CCA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTATTTGCAGGATGGGAGTaGGGAAGAAACGGCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: IGCHVSSIMKKMKMTTILFAGWE*GRNGSF Trigger: GAAGGAGCCGTTTCTTCCCCACTCCCATCCTGCAAA...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR CCA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTAAGTTCCAGCCTCTGCTaGGTGTTGACAGTCGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: IGCHVSSIMKKMKMTTILSSSLC*VLTVVQ Trigger: CTGAACGACTGTCAACACCCAGCAGAGGCTGGAACT...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR CAA 90 bp | ACACACAGAAGCTTGAAATACAATCACATACACCCAAAGTGGCTTTaGCTTTTTGTTGGTGGCAACCTTAGCCTTCAGTTCATGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: THRSLKYNHIHPKWL*LFVGGNLSLQFMET Trigger: TGTTTCCATGAACTGAAGGCTAAGGTTGCCACCAACAAAAAGCAAAAGCCACTTTGGGTGTATGTGATTGTATTTCAAGCTTCTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR GCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGCCTGTCACATTTCTATaGCATTTATATAGTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: VTLVTSLDHSTEDEIINQPVTFL*HLYSPR Trigger: TCTTGGACTATATAAATGGCATAGAAATGTGACAGG...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATGCTACCAGGATGTTGTTGGAAGGGAGATGATGACTaGGGCAAGTCTTTAAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: CWYLCSFCSCEMLPGCCWKGDDD*GKSLNS Trigger: AGAATTTAAAGACTTGCCCCAGTCATCATCTCCCTT...CCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTTGTGGACTGAAACCTTaGGACATTTCTTTGGCTATC | + |
|
Preference number: 2 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSCGLKP*DISLAI Trigger: GATAGCCAAAGAAATGTCTCAAGGTTTCAGTCCACA...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR GCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCTTGGTTAAAAGGGTTTaGAGCGAGCAGCACTTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPLVKRV*SEQHLV Trigger: GACTAAGTGCTGCTCGCTGCAAACCCTTTTAACCAA...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CCA 90 bp | CCATGTATTATTGTGTACTGTTTGCATGTGACAGATAAGCTGGCTTCCCTGGGAGCTTTATTTTGTGAATaGTTGTTTGGAGATTTCCGT | + |
|
Preference number: 2 (lower is better) Translates to: PCIIVYCLHVTDKLASLGALFCE*LFGDFR Trigger: ACGGAAATCTCCAAACAACCATTCACAAAATAAAGC...TCCCAGGGAAGCCAGCTTATCTGTCACATGCAAACAGTACACAATAATACATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| 3UTR CAA 90 bp | TCTTTCCGAGTCAAGAAGCCAGAGCCTAGTTCCAATTGCTTAAATTaGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SFRVKKPEPSSNCLN*PVTFLCHLYSPRTD Trigger: ATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATTTAAGCAATTGGAACTAGGCTCTGGCTTCTTGACTCGGAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTAAGCGTTTGATTGTGTTCTTTAGAGCTTGTCTCTTATTGCAGAACCAAACTTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: FKRLIVFFRACLLLQNQTCGRKK*LLRMVC Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACA...AGTTTGGTTCTGCAATAAGAGACAAGCTCTAAAGAACACAATCAAACGCTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTATTCTCTTTTGTGTTGTGTTGTGTGTGTGACCATGTGTTCACGACAGAAGACGACAATTTTAAATaGGTGAGAAACACACAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FLFSFVLCCVCDHVFTTEDDNFK*VRNTQK Trigger: CTTCTGTGTGTTTCTCACCCATTTAAAATTGTCGTC...TTCTGTCGTGAACACATGGTCACACACACAACACAACACAAAAGAGAATAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR TCA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATACAATTTTAAATGGGTaGGAAACACACAGAAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ADKSALVSMFQQVRSFQYTILNG*ETHRSL Trigger: CAAGCTTCTGTGTGTTTCTCACCCATTTAAAATTGT...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATTCTCTGTTGTGTTTATaGTTGATCATTAACTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ADKSALVSMFQQVRSFQYSLLCL*LIINWV Trigger: TACCCAGTTAATGATCAAGCATAAACACAACAGAGA...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | TGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTaGCTGTATGCGGGGCCCTCTGTGGCACTGAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WLLRMVCLQMAD*LYAGPSVALRA Trigger: AGCCCTCAGTGCCACAGAGGGCCCCGCATACAGCCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| 3UTR CCA 72 bp | CAGCAGGCTCCAGGGGTTTCTTTGCCCTTTATTCGGTaGCCTTCTTGGGTTTCATGGCCCATGCCTGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QQAPGVSLPFIR*PSWVSWPMPGG Trigger: TCCCCCAGGCATGGGCCATGAAACCCAAGAAGGCCACCGAATAAAGGGCAAAGAAACCCCTGGAGCCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | CTCACTCCCAATAAATTCCGTGAGATTCTGCATACCTaGTCGATGGCGGGCCTCAGCCTCAGCCATCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: LTPNKFREILHT*SMAGLSLSHPP Trigger: CGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGGGAGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| 3UTR CCA 72 bp | ATTCACCCTGGCGGCCCAGACAACAGGCGAGAAAGATaGGAGAAAGCGGGCTTCCCACTTTTCCGTTGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: IHPGGPDNRRER*EKAGFPLFRWY Trigger: GTACCAACGGAAAAGTGGGAAGCCCGCTTTCTCCCATCTTTCTCGCCTGTTGTCTGGGCCGCCAGGGTGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | CCAATAAATTCCGTGAGATTCTGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PINSVRFCIPAR*RASASAIHRSS Trigger: GCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| 3UTR GCA 72 bp | ATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTaGTGGGTGTTGACAGTCGTTCAGCAGATAGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: ISGVDRERSSSL*WVLTVVQQIDL Trigger: TAGGTCTATCTGCTGAACGACTGTCAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | CCAGAACAACCCAGTCTATTTTCCTGCCCTCTCTCCTaGTGCCTGCCCCAGGCATGGAGAAGCAGATTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PEQPSLFSCPLS*CLPQAWRSRFL Trigger: AAGGAATCTGCTTCTCCATGCCTGGGGCAGGCAGCAGGAGAGAGGGCAGGAAAATAGACTGGGTTGTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | TTGGATGGCTCACTCCCAATAAATTCCGTGAGATTCTaGATACCTGCTCGATGGCGGGCCTCAGCCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LDGSLPINSVRF*IPARWRASASA Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGGGAGTGAGCCATCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| 3UTR CCA 72 bp | TCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTaGGTGTTGACAGTCGTTCAGCAGATAGACCTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SGVDRERSSSLC*VLTVVQQIDLV Trigger: AACTAGGTCTATCTGCTGAACGACTGTCAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | CCTGAAGGGATGCAGTGCTCCTCCAGGTGGCAGACTTaGATTCGCTTTGAACAGATACGAGTTTGTGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PEGMQCSSRWQT*IRFEQIRVCVG Trigger: GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGAGCACTGCATCCCTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | GCGTTTGCAGTGGTTCCGACTTTGGTTAAAAGGGTTTaGAGCGAGCAGCACTTAGTCCCTGAAGGGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AFAVVPTLVKRV*SEQHLVPEGMQ Trigger: CTGCATCCCTTCAGGGACTAAGTGCTGCTCGCTGCAAACCCTTTTAACCAAAGTCGGAACCACTGCAAACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | CCAGGGGTTTCTTTGCCCTTTATTCGGTGGCCTTCTTaGGTTTCATGGCCCATGCCTGGGGGAAGTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PGVSLPFIRWPS*VSWPMPGGSSF Trigger: AAAAGAACTTCCCCCAGGCATGGGCCATGAAACCCAAGAAGGCCACCGAATAAAGGGCAAAGAAACCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | CACTTAGTCCCTGAAGGGATGCAGTGCTCCTCCAGGTaGCAGACTTGCATTCGCTTTGAACAGATACGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLVPEGMQCSSR*QTCIRFEQIRV Trigger: AACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGAGCACTGCATCCCTTCAGGGACTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | GGGAGGGGAGATAGTCTTTGTAATCATCTGGGCAGCTaGAGGTGGGCTATCTCTTCCCCTTTCATGATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRGDSLCNHLGS*RWAISSPFMIC Trigger: GCAAATCATGAAAGGGGAAGAGATAGCCCACCTCCAGCTGCCCAGATGATTACAAAGACTATCTCCCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR TCA 72 bp | GCCATATCTACACAATGTGCATATTCCTACACATGCTaGGCTTTGGTCCAGCGCAGAGAAGAGAGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AISTQCAYSYTC*ALVQRREESKG Trigger: GCCTTTGCTCTCTTCTCTGCGCTGGACCAAAGCTCAGCATGTGTAGGAATATGCACATTGTGTAGATATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | AGTTTGGCTGTCAGACTGCTAGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLAVRLLAIVFS*ASCGRKKWLLR Trigger: CCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| 3UTR TCA 72 bp | CTACAACTCATAGTGAGAAGAAAGCCACGAGTGCTTTaGCACACCACCATCCATGTTGTTTCTCCACTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LQLIVRRKPRVL*HTTIHVVSPLH Trigger: GTGGAGTGGAGAAACAACATGGATGGTGGTGTGTCAAAGCACTCGTGGCTTTCTTCTCACTATGAGTTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR TCA 72 bp | ACTATTCTATGCTCTCCCAATCATAGATGCCAGAACTaGGCAGGCCTCATGTGCCTGTTTCCGGTTCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: TILCSPNHRCQN*AGLMCLFPVQI Trigger: AATCTGAACCGGAAACAGGCACATGAGGCCTGCTCAGTTCTGGCATCTATGATTGGGAGAGCATAGAATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | CTACACAATGTGCATATTCCTACACATGCTGAGCTTTaGTCCAGCGCAGAGAAGAGAGCAAAGGCAATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LHNVHIPTHAEL*SSAEKRAKAIG Trigger: TCCAATTGCCTTTGCTCTCTTCTCTGCGCTGGACCAAAGCTCAGCATGTGTAGGAATATGCACATTGTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACACTGCTAAGAAGCAAATaGGTAGACAGTGAGCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: QEQMYPSSKCLSTLSDETLLRSK*VDSEPH Trigger: GTGTGGCTCACTGTCTACCAATTTGCTTCTTAGCAG...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGCTGGGTTGCTGGTATTaGTGCAGTTTTTGCAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VTLVTSLDHSTEDEIINQLGCWY*CSFCSC Trigger: ACAACTGCAAAAACTGCACAAATACCAGCAACCCAG...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR TCA 72 bp | GTGGATGAGTGTGAACGTGCTTGTGTGTGTGTGGACTaGAACCTTGAGACATTTCTTTGGCTATCAGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: VDECERACVCVD*NLETFLWLSDF Trigger: GAAGTCTGATAGCCAAAGAAATGTCTCAAGGTTTCAGTCCACACACACACAAGCACGTTCACACTCATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR TCA 72 bp | TCTGGGTTGCTGGTATTTGTGCAGTTTTTGCAGTTGTaGAATGCTACCAGGATGTTGTTGGCACTAATCGGG | + |
|
Preference number: 3 (lower is better) Translates to: SGLLVFVQFLQL*NATRMLLALIG Trigger: CCCGATTAGTGCCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCAACCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | GTTGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATaGTACCAGGATGTTGTTGGCACTAATCGGGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VAGICAVFAVVK*YQDVVGTNRAG Trigger: ACCAGCCCGATTAGTGCCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGTACAGCTTGAGTTCTTaGAGACGCCTCTACTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VTLVTSLDHSTEDEIINQYSLSS*RRLYLF Trigger: AAACAAGTAGAGGCGTCTCAAAGAACTCAAGCTGTA...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | TTTCGGTTTCTGGGTTGCTGGTATTTGTGCAGTTTTTaGAGTTGTGAAATGCTACCAGGATGTTGTTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FRFLGCWYLCSF*SCEMLPGCCWH Trigger: GTGCCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCAACCCAGAAACCGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | ACAAGTAAGGAGCTTTCAATATCCAGTTTGGCTTCTTaGTCACGAGTCTATCATGTCAATGTCTCGTCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSKELSISSLAS*SRVYHVNVSSA Trigger: TGCCGACGAGACATTGACATGATAGACTCGTGACCAAGAAGCCAAACTGGATATTGAAAGCTCCTTACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGTTTATTGGAGAGCCTTaGTTGCTAAACTTCTTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: VTLVTSLDHSTEDEIINQFIGEP*LLNFFP Trigger: CGGAAAGAAGTTTAGCAACAAAGGCTCTCCAATAAA...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATGACGCCTCTACTTGTTaGGTTCTGCCTCTCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ADKSALVSMFQQVRSFQYDASTC*VLPLPA Trigger: AGCTGGGAGAGGCAGAACCAAACAAGTAGAGGCGTC...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR TCA 72 bp | GCTACTTCATCTGCTAAGAAGCAAATTGGTAGACAGTaGGCCACACAGAGTGATTTCAACAATGGCATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ATSSAKKQIGRQ*ATQSDFNNGIH Trigger: GTGAATGCCATTGTTGAAATCACTCTGTGTGGCTCACTGTCTACCAATTTGCTTCTTAGCAGATGAAGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATGCTACCAGGATGTTGTTGGATTGGAGAGCCTTTGTaGCTAAACTTCTTTCCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: CWYLCSFCSCEMLPGCCWIGEPL*LNFFPS Trigger: ACTCGGAAAGAAGTTTAGCAACAAAGGCTCTCCAAT...CCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATAAAGCCACGAGTGCTTaGACACACCACCATCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: ADKSALVSMFQQVRSFQYKATSA*THHHPC Trigger: ACATGGATGGTGGTGTGTCAAAGCACTCGTGGCTTT...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTGTGTGGACTGAAACCTaGAGACATTTCTTTGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSVWTET*RHFFGY Trigger: ATAGCCAAAGAAATGTCTCAAGGTTTCAGTCCACAC...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTAAGTGGCTTTTGCTTTTaGTTGGTGGCAACCTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IGCHVSSIMKKMKMTTILSGFCF*LVATLA Trigger: GGCTAAGGTTGCCACCAACAAAAAGCAAAAGCCACT...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | TCTTTCCGAGTCAAGAAGCCAGAGCCTAGTTCCAATTaGTTAAATTTGCCTGTCACATTTCTATGCCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: SFRVKKPEPSSN*LNLPVTFLCHL Trigger: TAAATGGCATAGAAATGTGACAGGCAAATTTAAGCAATTGGAACTAGGCTCTGGCTTCTTGACTCGGAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CCA 72 bp | ATGTTTCAACAAGTAAGGAGCTTTCAATATCCAGTTTaGCTTCTTGGTCACGAGTCTATCATGTCAATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: MFQQVRSFQYPV*LLGHESIMSMS Trigger: AGACATTGACATGATAGACTCGTGACCAAGAAGCCAAACTGGATATTGAAAGCTCCTTACTTGTTGAAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTATTCTCTTTTGTGTTGTGTTGTGTGTGTGACCATGTGTTCACGACAGAACTGAGAGAATTTGCTTaGAACAGAAGCAAAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: FLFSFVLCCVCDHVFTTELREFA*NRSKTQ Trigger: CTGTGTTTTGCTTCTGTTCAAAGCAAATTCTCTCAG...TTCTGTCGTGAACACATGGTCACACACACAACACAACACAAAAGAGAATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR GCA 72 bp | AGTTCCAATTGCTTAAATTTGCCTGTCACATTTCTATaGCATTTATATAGTCCAAGAACAGATGTACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSNCLNLPVTFL*HLYSPRTDVPQ Trigger: CTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATTTAAGCAATTGGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGCTGTGGGGGTGCCTGTaGGGCTGGCTGTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPISGVDRERSSSLCWVLLWGCL*GWLWVL Trigger: CAGCACCCACAGCCAGCCTCACAGGCACCCCCACAG...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGTGTCGCACGGGACTGTaGGAGGTGGCAGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPISGVDRERSSSLCWVLCRTGL*EVAAWP Trigger: TGGCCAAGCTGCCACCTCTCACAGTCCCGTGCGACA...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGGCTGGCTGTGGGTGCTaGCTGGTTGGTGGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IPISGVDRERSSSLCWVLAGCGC*LVGGGG Trigger: ACCTCCTCCACCAACCAGCCAGCACCCACAGCCAGC...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGAGGGCTTGTCCCACCTaGGTCTGTGTCAGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPISGVDRERSSSLCWVLRACPT*VCVRPR Trigger: CCTTGGCCTGACACAGACTCAGGTGGGACAAGCCCT...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGGGGCTTGAGCTCTGCTaGGTTGGAGATGGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPISGVDRERSSSLCWVLGLELC*VGDGWF Trigger: GAACCAGCCATCTCCAACCCAGCAGAGCTCAAGCCC...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACAAGGGCCTGGGGCGTaGAGGAGGTGCGCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPQGPGA*RRCAAC Trigger: GCAAGCGGCGCACCTCCTTCACGCCCCAGGCCCTTG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACTGTGGGGGTGCCTGTaGGGCTGGCTGTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPLWGCL*GWLWVL Trigger: CAGCACCCACAGCCAGCCTCACAGGCACCCCCACAG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTAGCCTGCTGCAGCTaGGCTGGGGGAGCCGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVACCS*AGGAGN Trigger: GTTGCCGGCTCCCCCAGCTCAGCTGCAGCAGGCTAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | CCGTCTGATTCCAGCCCACACAGCAGCCTCCGTGTGTCACTGAAGGTGGCTCATATTGCCAAAGGCCTGTaGACTTGCTATGGAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSDSSPHSSLRVSLKVAHIAKGL*TCYGAH Trigger: ATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAAT...ATGAGCCACCTTCAGTGACACACGGAGGCTGCTGTGTGGGCTGGAATCAGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGTGCCACTTGCTGCTTaGCTCGATGGCCCTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ASCGRKKWLLRMVCLQMAVPLAA*LDGPGL Trigger: TAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCAC...GGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGGGGAGCCGGCAACTaGTGTGAGGCAGGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGGAGN*CEAGGG Trigger: GCCACCACCTGCCTCACAGCAGTTGCCGGCTCCCCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGGTCCACCTCACCCGCTaGTGTTTGAGGATCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGRKKWLLRMVCLQMADWVHLTR*CLRICW Trigger: CCAGCAGATCCTCAAACAGCAGCGGGTGAGGTGGAC...CCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGGGATTGCTGACTAACTaGCCCACGCTCAAAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPISGVDRERSSSLCWVLGLLTN*PTLKAE Trigger: TTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAATCC...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IPISGVDRERSSSLCWVLTGLIF*ALLGVM Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGGACCAGGCCTTGCTaGCCACCTAGCTGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPRTRPC*PPSCPA Trigger: GGCGGGACAGCTAGGTGGTCAGCAAGGCCTGGTCCT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGGGCCCTCTGTGGCACTaGGGGCTTGTCCCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTLVTSLDHSTEDEIINQGPLWH*GLVPPE Trigger: CTCAGGTGGGACAAGCCCTCAGTGCCACAGAGGGCC...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGCCCTCTGTGGCACTaGGGGCTTGTCCCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGPLWH*GLVPPE Trigger: CTCAGGTGGGACAAGCCCTCAGTGCCACAGAGGGCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGCTTCTCAGCAATCTCGGTCATTTCCTGCCCTGAGGGGTGTGTGTTCTTCTCACCCGCTGCTGTTTaGGGATCTGCTGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFSAISVISCPEGCVFFSPAAV*GSAGLA Trigger: AGCCAGGCCAGCAGATCCTCAAACAGCAGCGGGTGA...GAAGAACACACACCCCTCAGGGCAGGAAATGACCGAGATTGCTGAGAAGCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCTTCTCAGCAATCTCGGTCATTTCCTGCCCTGAGGGGTGTGTGTTCTTCTGCCCTGAGTGCCACTTaGTGCTTGACTCGATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LASQQSRSFPALRGVCSSALSAT*CLTRWP Trigger: GGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGC...AGAAGAACACACACCCCTCAGGGCAGGAAATGACCGAGATTGCTGAGAAGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGCCGACTGGCTGTATaGGGGGCCCTCTGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGRLAV*GALCGT Trigger: AGTGCCACAGAGGGCCCCGCATACAGCCAGTCGGCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | GGTCGTAGTTTAGCTTCTCAGCAATCTCGGTCATTTCCTGCCCTGAGGGGTGTGTGCTGCTTGACTCGATaGCCCTGGGTTAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSLASQQSRSFPALRGVCCLTR*PWVRHQ Trigger: CTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCA...CACACCCCTCAGGGCAGGAAATGACCGAGATTGCTGAGAAGCTAAACTACGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCCAGGTGGCAGACTTGCATTCGCTTTGAACAGATACGAGTTTGTGTTGGCGTGAAGCTGCTGGCCTaGCTTGATGGGGGACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRWQTCIRFEQIRVCVGVKLLA*LDGGQG Trigger: ACCCTGTCCCCCATCAAGCCAGGCCAGCAGCTTCAC...GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGGAGGATCTGCTGGCCTaGCTTGATGGGGGACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGYKRPGFSLAVRLLAIVEDLLA*LDGGQG Trigger: ACCCTGTCCCCCATCAAGCCAGGCCAGCAGATCCTC...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGTCGCACGGGACTGTaGGAGGTGGCAGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCRTGL*EVAAWP Trigger: TGGCCAAGCTGCCACCTCTCACAGTCCCGTGCGACA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGAGGCTGGCTGTGGGTaGTGGCTGGTTGGTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPEAGCG*WLVGGG Trigger: TCCTCCACCAACCAGCCAGCACCCACAGCCAGCCTC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGACTGCTAGCTATAGTGCTGAGTGCCACTTGCTaGTTGACTCGATGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGYKRPGFSLAVRLLAIVLSATC*LTRWPW Trigger: CCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAG...CACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGCTGGCTGTGGGTGCTaGCTGGTTGGTGGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPAGCGC*LVGGGG Trigger: ACCTCCTCCACCAACCAGCCAGCACCCACAGCCAGC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGCCTGTGAACTTGCTATaGAGCCCATGGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWASCGRKKWLLRMVCLQPVNLL*SPWLLQ Trigger: CTGCAGCAGCCATGGGCTCCATAGCAAGTTCACAGG...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCCAATAAATTCCGTGAGATTCTGCATACCTGCTCGATGGCGGGCCTCAGCGACAGGGTGATACCCTaGGTGTTGATCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPNKFREILHTCSMAGLSDRVIP*VLITGK Trigger: CTTGCCTGTGATCAACACCCAGGGTATCACCCTGTC...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACTGCAGATGGCCGACTaGCTGTATGCGGGGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPLQMAD*LYAGPS Trigger: AGAGGGCCCCGCATACAGCCAGTCGGCCATCTGCAG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCIPAR*RASASA Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| 3UTR CAA 72 bp | TCCAGGGGTTTCTTTGCCCTTTATTCGGTGGCCTTCTaGGGTTTCATGGCCCATGCCTGGGGGAAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGFFALYSVAF*GFMAHAWGKFF Trigger: AAAGAACTTCCCCCAGGCATGGGCCATGAAACCCAAGAAGGCCACCGAATAAAGGGCAAAGAAACCCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAAGGTGGGATGGGTCTaGCAGGCCTGGTGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPKVGWV*QAWCWS Trigger: TGACCAGCACCAGGCCTGTCAGACCCATCCCACCTT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGATTGCCAAAGGCCTGTaGACTTGCTATGGAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGRKKWLLRMVCLQMADWIAKGL*TCYGAH Trigger: ATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAAT...CCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGGGCTTGTCCCACCTaGGTCTGTGTCAGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPRACPT*VCVRPR Trigger: CCTTGGCCTGACACAGACTCAGGTGGGACAAGCCCT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCCAGGTGGCAGACTTGCATTCGCTTTGAACAGATACGAGTTTGTGTTGGCACAGCAGAGGCTAACTaGTGTGCCGTCAGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRWQTCIRFEQIRVCVGTAEAN*CAVRRG Trigger: GCCTCTTCTGACGGCACAGCAGTTAGCCTCTGCTGT...GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGCCTCCAGCTGCAGCTaGTGCTACCAGCCCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPASSCS*CYQPLD Trigger: ATCCAAGGGCTGGTAGCAGCAGCTGCAGCTGGAGGC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCCAGGTGGCAGACTTGCATTCGCTTTGAACAGATACGAGTTTGTGTTGGCTGTTGCAGCTGGAGTTaGTGGAGCTGTTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRWQTCIRFEQIRVCVGCCSWS*WSCCSW Trigger: CCAGCTGCAACAGCTCCAGCAACTCCAGCTGCAACA...GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TTAGCTTCTCAGCAATCTCGGTCATTTCCTGCCCTGAGGGGTGTGTGTTCTTCTGGCTGGAGAGGGCATTaGCAAAGGCCTGTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LASQQSRSFPALRGVCSSGWRGH*QRPVNL Trigger: CAAGTTCACAGGCCTTTGGCAATGCCCTCTCCAGCC...AGAAGAACACACACCCCTCAGGGCAGGAAATGACCGAGATTGCTGAGAAGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGCCCTGAGTGCCACTTaGTGCTTGACTCGATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPALSAT*CLTRWP Trigger: GGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCCAGGTGGCAGACTTGCATTCGCTTTGAACAGATACGAGTTTGTGTTGGCGTCCACCTCACCCGCTaGTGTTTGAGGATTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRWQTCIRFEQIRVCVGVHLTR*CLRIAD Trigger: GTCAGCAATCCTCAAACAGCAGCGGGTGAGGTGGAC...GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGAGATGGCTGGTTCTaGGTCTGGTTCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGDGWF*VWFWGW Trigger: CCACCCCCAGAACCAGACCCAGAACCAGCCATCTCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGGCTATGTCCGGGAGATaGGCTGGGTTTCTGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTLVTSLDHSTEDEIINQAMSGR*AGFLRG Trigger: CCCCCTCAGAAACCCAGCCCATCTCCCGGACATAGC...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGCTATGTCCGGGAGATaGGCTGGGTTTCTGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPAMSGR*AGFLRG Trigger: CCCCCTCAGAAACCCAGCCCATCTCCCGGACATAGC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTGAAGCTGCTGGCCTaGCTTGATGGGGGACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVKLLA*LDGGQG Trigger: ACCCTGTCCCCCATCAAGCCAGGCCAGCAGCTTCAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACATGCATACCTGCTCGATaGCGGGCCTCAGCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETCIPAR*RASASA Trigger: GGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCA...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACAAAGGTGGGATGGGTCTaGCAGGCCTGGTGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETKVGWV*QAWCWS Trigger: TGACCAGCACCAGGCCTGTCAGACCCATCCCACCTT...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTGCCACTTGCTGCTTaGCTCGATGGCCCTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVPLAA*LDGPGL Trigger: TAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTCTGGGAAGATTGGTaGAGCTGCTGGCCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVWEDW*SCWPGL Trigger: CAAGCCAGGCCAGCAGCTTCACCAATCTTCCCAGAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACCTTGGGTGCCTGCTTaGCCCACTGATGTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPPWVPA*PTDVWE Trigger: TTCCCAGACATCAGTGGGTCAAGCAGGCACCCAAGG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTGGGGGAGCCGGCAACTaGTGTGAGGCAGGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSGGAGN*CEAGGG Trigger: GCCACCACCTGCCTCACAGCAGTTGCCGGCTCCCCC...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGCTGAGTGCCACTTGCTaGTTGACTCGATGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTLVTSLDHSTEDEIINQLSATC*LTRWPW Trigger: CCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAG...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACTGAGTGCCACTTGCTaGTTGACTCGATGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPLSATC*LTRWPW Trigger: CCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACCAGGTGCAGAAGGTTaGCTTGGGTGCCTGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPPGAEG*LGCLLD Trigger: GTCAAGCAGGCACCCAAGGCAACCTTCTGCACCTGG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TACTGTTTGCATGTGACAGATAAGCTGGCTTCCCTGGGAACATATGCTAACTCCCCAGGTGCAGAAGGTTaGCTTGGGTGCCTGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YCLHVTDKLASLGTYANSPGAEG*LGCLLD Trigger: GTCAAGCAGGCACCCAAGGCAACCTTCTGCACCTGG...GGAGTTAGCATATGTTCCCAGGGAAGCCAGCTTATCTGTCACATGCAAACAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGAGATTCTGCATACCTaGTCGATGGCGGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPEILHT*SMAGLS Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGGAGGTGCGCCGCTTaGGCTTTTTGGATGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPRRCAA*AFWMAH Trigger: GTGAGCCATCCAAAAAGCGCAAGCGGCGCACCTCCT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGCCCAACTGGAAAGGTaGGATGGGTCTGACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPAQLER*DGSDRP Trigger: AGGCCTGTCAGACCCATCCCACCTTTCCAGTTGGGC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGGCTGTGGCCCAACTaGAAAGGTGGGATGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPRLWPN*KGGMGL Trigger: CAGACCCATCCCACCTTTCCAGTTGGGCCACAGCCT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCCAGGTGGCAGACTTGCATTCGCTTTGAACAGATACGAGTTTGTGTTGGCGCTGCTACCAGCCCTTaGATGTTTGTGAGATTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSRWQTCIRFEQIRVCVGAATSP*MFVRFA Trigger: CGCGAATCTCACAAACATCCAAGGGCTGGTAGCAGC...GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGCAGCTGGAGTTGCTaGAGCTGTTGCAGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCSWSC*SCCSWE Trigger: CTCCCAGCTGCAACAGCTCCAGCAACTCCAGCTGCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGGGTGCTGGCTGGTTaGTGGAGGAGGTGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPWVLAG*WRRWLL Trigger: CAACAACCACCTCCTCCACCAACCAGCCAGCACCCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGGCTTGAGCTCTGCTaGGTTGGAGATGGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGLELC*VGDGWF Trigger: GAACCAGCCATCTCCAACCCAGCAGAGCTCAAGCCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | GACCCATGTATTATTGTGTACTGTTTGCATGTGACAGATAAGCTGGCTTCCCTGGTGAAGCTGCTGGCCTaGCTTGATGGGGGACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DPCIIVYCLHVTDKLASLVKLLA*LDGGQG Trigger: ACCCTGTCCCCCATCAAGCCAGGCCAGCAGCTTCAC...CAGGGAAGCCAGCTTATCTGTCACATGCAAACAGTACACAATAATACATGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGGTGTGTCTGCAGATaGCCGACTGGCTGTATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPWCVCR*PTGCMR Trigger: CCGCATACAGCCAGTCGGCCATCTGCAGACACACCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTAGGACCAGGCCTTGCTaGCCACCTAGCTGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSRTRPC*PPSCPA Trigger: GGCGGGACAGCTAGGTGGTCAGCAAGGCCTGGTCCT...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCGTAGCCTGCTGCAGCTaGGCTGGGGGAGCCGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPVACCS*AGGAGN Trigger: GTTGCCGGCTCCCCCAGCTCAGCTGCAGCAGGCTAC...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACAGTCTGGGAAGATTGGTaGAGCTGCTGGCCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETVWEDW*SCWPGL Trigger: CAAGCCAGGCCAGCAGCTTCACCAATCTTCCCAGAC...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGCCTGCTTGACCCACTaGTGTCTGGGAAGATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPACLTH*CLGRLV Trigger: CACCAATCTTCCCAGACATCAGTGGGTCAAGCAGGC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TACTGTTTGCATGTGACAGATAAGCTGGCTTCCCTGGGAACATATGCTAACTCCGCCTGCTTGACCCACTaGTGTCTGGGAAGATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YCLHVTDKLASLGTYANSACLTH*CLGRLV Trigger: CACCAATCTTCCCAGACATCAGTGGGTCAAGCAGGC...GGAGTTAGCATATGTTCCCAGGGAAGCCAGCTTATCTGTCACATGCAAACAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR TCA 90 bp | TATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAATGGTGTCGCACGGGACTGTaGGAGGTGGCAGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSHFIREAAFRLALFCEWCRTGL*EVAAWP Trigger: TGGCCAAGCTGCCACCTCTCACAGTCCCGTGCGACA...CCATTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPSQSGH*GSQGPG Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAACAGCAGAGGCTAACTaGTGTGCCGTCAGAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPTAEAN*CAVRRG Trigger: GCCTCTTCTGACGGCACAGCAGTTAGCCTCTGCTGT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGTTGCAGCTGGAGTTaGTGGAGCTGTTGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCCSWS*WSCCSW Trigger: CCAGCTGCAACAGCTCCAGCAACTCCAGCTGCAACA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGCTGGAGAGGGCATTaGCAAAGGCCTGTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGWRGH*QRPVNL Trigger: CAAGTTCACAGGCCTTTGGCAATGCCCTCTCCAGCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGAAGGTTGCCTTGGGTaGCTGCTTGACCCACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPEGCLG*LLDPLM Trigger: CATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACACCAGGTGCAGAAGGTTaGCTTGGGTGCCTGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETPGAEG*LGCLLD Trigger: GTCAAGCAGGCACCCAAGGCAACCTTCTGCACCTGG...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTCCACCTCACCCGCTaGTGTTTGAGGATTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVHLTR*CLRIAD Trigger: GTCAGCAATCCTCAAACAGCAGCGGGTGAGGTGGAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGTCAGGATGGTGTGTCTaGAGATGGCCGACTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTLVTSLDHSTEDEIINQSGWCV*RWPTGC Trigger: ACAGCCAGTCGGCCATCTGCAGACACACCATCCTGA...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTGCTGGCTGGTTGGTaGAGGAGGTGGTTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVLAGW*RRWLLL Trigger: CAACAACAACCACCTCCTCCACCAACCAGCCAGCAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGTGGGTTGGAGATGGCTaGTTCTGGGTCTGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTLVTSLDHSTEDEIINQWVGDG*FWVWFW Trigger: CCAGAACCAGACCCAGAACCAGCCATCTCCAACCCA...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGGGTTGGAGATGGCTaGTTCTGGGTCTGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPWVGDG*FWVWFW Trigger: CCAGAACCAGACCCAGAACCAGCCATCTCCAACCCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACTGCTGGGTTGGAGATaGCTGGTTCTGGGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPLLGWR*LVLGLV Trigger: AACCAGACCCAGAACCAGCCATCTCCAACCCAGCAG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGCCTGTGAACTTGCTATaGAGCCCATGGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTLVTSLDHSTEDEIINQPVNLL*SPWLLQ Trigger: CTGCAGCAGCCATGGGCTCCATAGCAAGTTCACAGG...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACCTGTGAACTTGCTATaGAGCCCATGGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPPVNLL*SPWLLQ Trigger: CTGCAGCAGCCATGGGCTCCATAGCAAGTTCACAGG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGATGGCCGACTGGTGGGTTAGGCATCAGTaGAATGGTCCCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGRKKWLLRMVCLQMADWWVRHQ*NGPNNL Trigger: CAGATTATTGGGACCATTCCACTGATGCCTAACCCA...CCAGTCGGCCATCTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTGGAGATTTCCGTCTGATTCCAGCCCACACAGCAGCCTCCGTGTGTCACTGGGTTAGGCATCAGTaGAATGGTCCCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFGDFRLIPAHTAASVCHWVRHQ*NGPNNL Trigger: CAGATTATTGGGACCATTCCACTGATGCCTAACCCA...GTGACACACGGAGGCTGCTGTGTGGGCTGGAATCAGACGGAAATCTCCAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTTCTCAGCAATCTCGGTCATTTCCTGCCCTGAGGGGTGTGTGTTCTTCTTTGACTCGATGGCCCTaGGTTAGGCATCAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LASQQSRSFPALRGVCSSLTRWP*VRHQWN Trigger: ATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAA...AGAAGAACACACACCCCTCAGGGCAGGAAATGACCGAGATTGCTGAGAAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGCTGCTTGACTCGATaGCCCTGGGTTAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCCLTR*PWVRHQ Trigger: CTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACTGTTTGAGGATTGCTaGCTAACTGGCCCACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPLFEDC*LTGPRS Trigger: TGAGCGTGGGCCAGTTAGTCAGCAATCCTCAAACAG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGTTGCTGGAGCTGTTaGAGCTGGGAGTTCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPSCWSC*SWEFRD Trigger: ATCCCTGAACTCCCAGCTGCAACAGCTCCAGCAACT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGCTGTTGTTGCTGTTaGAGCTGGAGTTGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCCCCC*SWSCWS Trigger: GCTCCAGCAACTCCAGCTGCAACAGCAACAACAGCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGCTGCTGCTGTTGTTaGTGTTGCAGCTGGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCCCCC*CCSWSC Trigger: GCAACTCCAGCTGCAACAGCAACAACAGCAGCAGCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACAGAAGGTTGCCTTGGGTaGCTGCTTGACCCACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETEGCLG*LLDPLM Trigger: CATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTC...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAATCTCGGTCATTTCCTaGCCTGAGGGGTGTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPISVIS*PEGCVF Trigger: GAACACACACCCCTCAGGGCAGGAAATGACCGAGAT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACCAGCTTTTCAAACCTaGAGATGGCCGACTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPPAFQT*RWPTGC Trigger: ACAGCCAGTCGGCCATCTGCAGGTTTGAAAAGCTGG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATGCTACCAGGATGTTGTTGGGCCCAACTGGAAAGGTaGGATGGGTCTGACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CWYLCSFCSCEMLPGCCWAQLER*DGSDRP Trigger: AGGCCTGTCAGACCCATCCCACCTTTCCAGTTGGGC...CCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGCTGCTACCAGCCCTTaGATGTTTGTGAGATTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPAATSP*MFVRFA Trigger: CGCGAATCTCACAAACATCCAAGGGCTGGTAGCAGC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGGAGCTGTTGCAGCTaGGAGTTCAGGGATGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPWSCCS*EFRDEV Trigger: TACCTCATCCCTGAACTCCCAGCTGCAACAGCTCCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGTTGCTGTTGCAGCTaGAGTTGCTGGAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCCCCS*SCWSCC Trigger: GCAACAGCTCCAGCAACTCCAGCTGCAACAGCAACA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACACTGCTGGGTTGGAGATaGCTGGTTCTGGGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETLLGWR*LVLGLV Trigger: AACCAGACCCAGAACCAGCCATCTCCAACCCAGCAG...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACATGCTGCTTGACTCGATaGCCCTGGGTTAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETCCLTR*PWVRHQ Trigger: CTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCA...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGACAGGGTGATACCCTaGGTGTTGATCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPDRVIP*VLITGK Trigger: CTTGCCTGTGATCAACACCCAGGGTATCACCCTGTC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATTTCAAACCTGCAGATaGCCGACTGGCTGTATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPFQTCR*PTGCMR Trigger: CCGCATACAGCCAGTCGGCCATCTGCAGGTTTGAAA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175703.9 |
||
| 3UTR CAA 72 bp | TCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCTATAGTGTTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLAGYKRPGFS*AVRLLAIVFSW Trigger: CCAAGAGAACACTATAGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAATTGCCAAAGGCCTGTaGACTTGCTATGGAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPIAKGL*TCYGAH Trigger: ATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAAT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAATGGGTGCCACTTGCTGCTTaGCTCGATGGCCCTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YSHFIREAAFRLALFCEWVPLAA*LDGPGL Trigger: TAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCAC...CCATTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR TCA 90 bp | TATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAATGGCCTTGGGTGCCTGCTTaGCCCACTGATGTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSHFIREAAFRLALFCEWPWVPA*PTDVWE Trigger: TTCCCAGACATCAGTGGGTCAAGCAGGCACCCAAGG...CCATTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR GCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCGAGGCTGGCTGTGGGTaGTGGCTGGTTGGTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPEAGCG*WLVGGG Trigger: TCCTCCACCAACCAGCCAGCACCCACAGCCAGCCTC...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | ATAGATGACTATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTGCCCTGAGTGCCACTTaGTGCTTGACTCGATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IDDYSHFIREAAFRLALFALSAT*CLTRWP Trigger: GGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGC...AAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATAGTCATCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAATTCCGTGAGATTCTaGATACCTGCTCGATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPNSVRF*IPARWR Trigger: CCGCCATCGAGCAGGTATGCAGAATCTCACGGAATT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATTGACTCGATGGCCCTaGGTTAGGCATCAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPLTRWP*VRHQWN Trigger: ATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGATTGCTGACTAACTaGCCCACGCTCAAAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGLLTN*PTLKAE Trigger: TTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAATCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAACCGGCTTGATCTTCTaGGCACTTTTAGGGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPTGLIF*ALLGVM Trigger: CATCACCCCTAAAAGTGCCCAGAAGATCAAGCCGGT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | TATATAGATGACTATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTAGTCTGGGAAGATTGGTaGAGCTGCTGGCCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YIDDYSHFIREAAFRLALVWEDW*SCWPGL Trigger: CAAGCCAGGCCAGCAGCTTCACCAATCTTCCCAGAC...TAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATAGTCATCTATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR GCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCGCCTCCAGCTGCAGCTaGTGCTACCAGCCCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPASSCS*CYQPLD Trigger: ATCCAAGGGCTGGTAGCAGCAGCTGCAGCTGGAGGC...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATGCTACCAGGATGTTGTTGGTGCTGCTGCTGTTGTTaGTGTTGCAGCTGGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CWYLCSFCSCEMLPGCCWCCCCC*CCSWSC Trigger: GCAACTCCAGCTGCAACAGCAACAACAGCAGCAGCA...CCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAATGGGGCTGGAGAGGGCATTaGCAAAGGCCTGTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSHFIREAAFRLALFCEWGWRGH*QRPVNL Trigger: CAAGTTCACAGGCCTTTGGCAATGCCCTCTCCAGCC...CCATTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR GCA 90 bp | ATAGATGACTATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTCTGAGTGCCACTTGCTaGTTGACTCGATGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IDDYSHFIREAAFRLALFLSATC*LTRWPW Trigger: CCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAG...AAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATAGTCATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR GCA 90 bp | GACTATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAAGAAGGTTGCCTTGGGTaGCTGCTTGACCCACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: DYSHFIREAAFRLALFCEEGCLG*LLDPLM Trigger: CATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTC...TTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTGAGATTCTGCATACCTaGTCGATGGCGGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSEILHT*SMAGLS Trigger: GCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTC...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTAGGAGGTGCGCCGCTTaGGCTTTTTGGATGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSRRCAA*AFWMAH Trigger: GTGAGCCATCCAAAAAGCGCAAGCGGCGCACCTCCT...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGAGGTGGGCTCGTGTTaGTTTAAGCGTTTGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPEVGSC*FKRLIV Trigger: CACAATCAAACGCTTAAAGCAACACGAGCCCACCTC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCGGAGATGGCTGGTTCTaGGTCTGGTTCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPGDGWF*VWFWGW Trigger: CCACCCCCAGAACCAGACCCAGAACCAGCCATCTCC...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACATTGACTCGATGGCCCTaGGTTAGGCATCAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETLTRWP*VRHQWN Trigger: ATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAA...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TGTATTATTGTGTACTGTTTGCATGTGACAGATAAGCTGGCTTCCCTGGGAACAGACAGGGTGATACCCTaGGTGTTGATCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CIIVYCLHVTDKLASLGTDRVIP*VLITGK Trigger: CTTGCCTGTGATCAACACCCAGGGTATCACCCTGTC...TGTTCCCAGGGAAGCCAGCTTATCTGTCACATGCAAACAGTACACAATAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACCAGCTTTTCAAACCTaGCAGGATACAAAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPPAFQT*QDTKGQ Trigger: CTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CAA 72 bp | CCTACAACTCATAGTGAGAAGAAAGCCACGAGTGCTTaGACACACCACCATCCATGTTGTTTCTCCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTHSEKKATSA*THHHPCCFSTP Trigger: TGGAGTGGAGAAACAACATGGATGGTGGTGTGTCAAAGCACTCGTGGCTTTCTTCTCACTATGAGTTGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCCTTGGGTGCCTGCTTaGCCCACTGATGTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPPWVPA*PTDVWE Trigger: TTCCCAGACATCAGTGGGTCAAGCAGGCACCCAAGG...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACAGAGGTGGGCTCGTGTTaGTTTAAGCGTTTGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEQMYPSSKCLSTLSDETEVGSC*FKRLIV Trigger: CACAATCAAACGCTTAAAGCAACACGAGCCCACCTC...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCAGGCTGTGGCCCAACTaGAAAGGTGGGATGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPRLWPN*KGGMGL Trigger: CAGACCCATCCCACCTTTCCAGTTGGGCCACAGCCT...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCTGCAGCTGGAGTTGCTaGAGCTGTTGCAGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPCSWSC*SCCSWE Trigger: CTCCCAGCTGCAACAGCTCCAGCAACTCCAGCTGCA...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGGGTTAGGCATCAGTaGAATGGTCCCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPWVRHQ*NGPNNL Trigger: CAGATTATTGGGACCATTCCACTGATGCCTAACCCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | TATATAGATGACTATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATGCTGCTTGACTCGATaGCCCTGGGTTAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: YIDDYSHFIREAAFRLALCCLTR*PWVRHQ Trigger: CTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCA...TAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATAGTCATCTATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVFFSK*ALRISR Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR TCA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATGCCCTTGGATGTTTGTaGGATTCGCGGTGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ADKSALVSMFQQVRSFQYALGCL*DSRWAV Trigger: CACTGCCCACCGCGAATCTCACAAACATCCAAGGGC...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATGTGCCACTTGCTGCTTaGCTCGATGGCCCTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ADKSALVSMFQQVRSFQYVPLAA*LDGPGL Trigger: TAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCAC...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTATTCTCTTTTGTGTTGTGTTGTGTGTGTGACCATGTGTTCACGACAGAAGCCTGCTTGACCCACTaGTGTCTGGGAAGATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFVLCCVCDHVFTTEACLTH*CLGRLV Trigger: CACCAATCTTCCCAGACATCAGTGGGTCAAGCAGGC...TTCTGTCGTGAACACATGGTCACACACACAACACAACACAAAAGAGAATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTCTGTTTGAGGATTGCTaGCTAACTGGCCCACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSLFEDC*LTGPRS Trigger: TGAGCGTGGGCCAGTTAGTCAGCAATCCTCAAACAG...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTATTCTCTTTTGTGTTGTGTTGTGTGTGTGACCATGTGTTCACGACAGAATCTCAAAGTGGGCATTaGGGATCTCAAGGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFVLCCVCDHVFTTESQSGH*GSQGPG Trigger: CCCAGGCCCTTGAGATCCTCAATGCCCACTTTGAGA...TTCTGTCGTGAACACATGGTCACACACACAACACAACACAAAAGAGAATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTACATAATGCCTCCAGCTaGAGCTGCTGCTACCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IGCHVSSIMKKMKMTTILHNASS*SCCYQP Trigger: GGGCTGGTAGCAGCAGCTGCAGCTGGAGGCATTATG...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCGGCTGGAGAGGGCATTaGCAAAGGCCTGTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPGWRGH*QRPVNL Trigger: CAAGTTCACAGGCCTTTGGCAATGCCCTCTCCAGCC...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATCGTCAGAAGAGGCTGTaGCCCAACTGGAAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ADKSALVSMFQQVRSFQYRQKRL*PNWKGG Trigger: CCCACCTTTCCAGTTGGGCCACAGCCTCTTCTGACG...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAATGGTTGACTCGATGGCCCTaGGTTAGGCATCAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSHFIREAAFRLALFCEWLTRWP*VRHQWN Trigger: ATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAA...CCATTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACTTGCGCTTTTTGGATaGCTCACTCCCAATAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPLALFG*LTPNKF Trigger: GAATTTATTGGGAGTGAGCCATCCAAAAAGCGCAAG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR GCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCAGTTGCTGGAGCTGTTaGAGCTGGGAGTTCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPSCWSC*SWEFRD Trigger: ATCCCTGAACTCCCAGCTGCAACAGCTCCAGCAACT...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR GCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTAATTCCGTGAGATTCTaGATACCTGCTCGATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSNSVRF*IPARWR Trigger: CCGCCATCGAGCAGGTATGCAGAATCTCACGGAATT...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTAGTGCTGGCTGGTTGGTaGAGGAGGTGGTTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IGCHVSSIMKKMKMTTILVLAGW*RRWLLL Trigger: CAACAACAACCACCTCCTCCACCAACCAGCCAGCAC...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATGCTACCAGGATGTTGTTGGTGGGTTAGGCATCAGTaGAATGGTCCCAATAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWYLCSFCSCEMLPGCCWWVRHQ*NGPNNL Trigger: CAGATTATTGGGACCATTCCACTGATGCCTAACCCA...CCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | AATTTGCCTGTCACATTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCGACAGGGTGATACCCTaGGTGTTGATCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLPVTFLCHLYSPRTDVPDRVIP*VLITGK Trigger: CTTGCCTGTGATCAACACCCAGGGTATCACCCTGTC...GGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAATGTGACAGGCAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TATATAGATGACTATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTAACACTGCTGACTAACTaGCCCACGCTCAAAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YIDDYSHFIREAAFRLALTLLTN*PTLKAE Trigger: TTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAGTGT...TAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATAGTCATCTATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| 3UTR CAA 72 bp | TTTGGTTACAGCTTGAGTTCTTTGAGACGCCTCTACTaGTTTGGTTCTGCCTCTCCCAGCTCTTTGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGYSLSSLRRLY*FGSASPSSLIF Trigger: AAAAATCAAAGAGCTGGGAGAGGCAGAACCAAACAAGTAGAGGCGTCTCAAAGAACTCAAGCTGTAACCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTTGCTTTAAGCGTTTaGTTGTGTTCTTTAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVALSV*LCSLEL Trigger: AAGCTCTAAAGAACACAATCAAACGCTTAAAGCAAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CCA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTATGTTGCTGTTGCAGCTaGAGTTGCTGGAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IGCHVSSIMKKMKMTTILCCCCS*SCWSCC Trigger: GCAACAGCTCCAGCAACTCCAGCTGCAACAGCAACA...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CAA 72 bp | GTTATCTTGTTAACTTCTCCTCTTGGGGAGCTTTTCTaGATGGAATTTGGAGCAGGTCCTAGGAGAATACAA | + |
|
Preference number: 4 (lower is better) Translates to: VILLTSPLGELF*MEFGAGPRRIQ Trigger: TTGTATTCTCCTAGGACCTGCTCCAAATTCCATCAAGAAAAGCTCCCCAAGAGGAGAAGTTAACAAGATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CAA 72 bp | AGCTTGAAATACAATCACATACACCCAAAGTGGCTTTaGCTTTTTGTTGGTGGCAACCTTAGCCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLKYNHIHPKWL*LFVGGNLSLQF Trigger: GAACTGAAGGCTAAGGTTGCCACCAACAAAAAGCAAAAGCCACTTTGGGTGTATGTGATTGTATTTCAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATATTGCCAAAGGCCTGTaGACTTGCTATGGAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADKSALVSMFQQVRSFQYIAKGL*TCYGAH Trigger: ATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAAT...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTTGTGGTAGGAAAAAGTaGCTTCTCAGGATGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSCGRKK*LLRMVC Trigger: ACACACCATCCTGAGAAGCCACTTTTTCCTACCACA...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CAA 72 bp | AATACAATCACATACACCCAAAGTGGCTTTTGCTTTTaGTTGGTGGCAACCTTAGCCTTCAGTTCATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTITYTQSGFCF*LVATLAFSSWK Trigger: TTTCCATGAACTGAAGGCTAAGGTTGCCACCAACAAAAAGCAAAAGCCACTTTGGGTGTATGTGATTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTAGCTATAGTGTTCTCTTaGGCTTCCTGTGGTAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IGCHVSSIMKKMKMTTILAIVFS*ASCGRK Trigger: TTTCCTACCACAGGAAGCCCAAGAGAACACTATAGC...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATGTGTTCTTCTCAAAGTaGGCATTGAGGATCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADKSALVSMFQQVRSFQYVFFSK*ALRISR Trigger: CCTTGAGATCCTCAATGCCCACTTTGAGAAGAACAC...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| 3UTR CAA 72 bp | GTCAAGAAGCCAGAGCCTAGTTCCAATTGCTTAAATTaGCCTGTCACATTTCTATGCCATTTATATAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKKPEPSSNCLN*PVTFLCHLYSP Trigger: TGGACTATATAAATGGCATAGAAATGTGACAGGCAAATTTAAGCAATTGGAACTAGGCTCTGGCTTCTTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CCA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTACTTGCGCTTTTTGGATaGCTCACTCCCAATAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: IGCHVSSIMKKMKMTTILLALFG*LTPNKF Trigger: GAATTTATTGGGAGTGAGCCATCCAAAAAGCGCAAG...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTATTCTCTTTTGTGTTGTGTTGTGTGTGTGACCATGTGTTCACGACAGAAGTTGCTTTAAGCGTTTaGTTGTGTTCTTTAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFVLCCVCDHVFTTEVALSV*LCSLEL Trigger: AAGCTCTAAAGAACACAATCAAACGCTTAAAGCAAC...TTCTGTCGTGAACACATGGTCACACACACAACACAACACAAAAGAGAATAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS TCA 90 bp | ACCTGTGACCCCCTGAAGGCTGGAGAGGGCATTGCCAAAGGCCTGTaGACTTGCTATGGAGCCCATGGCTGCTGCAGCAGCGGCGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TCDPLKAGEGIAKGL*TCYGAHGCCSSGGL Trigger: CAGGCCGCCGCTGCTGCAGCAGCCATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAATGCCCTCTCCAGCCTTCAGGGGGTCACAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 |
||
| CDS CCA 90 bp | CCTGAAGGCTGGAGAGGGCATTGCCAAAGGCCTGTGAACTTGCTATaGAGCCCATGGCTGCTGCAGCAGCGGCGGCCTGGCTTGCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PEGWRGHCQRPVNLL*SPWLLQQRRPGLLE Trigger: CTCTAGCAAGCCAGGCCGCCGCTGCTGCAGCAGCCATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAATGCCCTCTCCAGCCTTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | CGATGGCGGGCCTCAGCCTCAGCCATCCACCGCTCAAGCACCGGCTTGATCTTCATCTGCTGGCCTGGCTaGATGGGGGACAGGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: RWRASASAIHRSSTGLIFICWPG*MGDRVI Trigger: TATCACCCTGTCCCCCATCAAGCCAGGCCAGCAGAT...GAAGATCAAGCCGGTGCTTGAGCGGTGGATGGCTGAGGCTGAGGCCCGCCATCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS TCA 90 bp | GCCGTCAGAAGAGGCTGTGGCCCAACTGGAAAGGTGGGATGGGTCTaGCAGGCCTGGTGCTGGTCAGGAGTTCCTGGATCTGGCAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: AVRRGCGPTGKVGWV*QAWCWSGVPGSGKT Trigger: AGTCTTGCCAGATCCAGGAACTCCTGACCAGCACCAGGCCTGTCAGACCCATCCCACCTTTCCAGTTGGGCCACAGCCTCTTCTGACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGTGTGGCACTGAGGGCTaGTCCCACCTGAGTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IPISGVDRERSSSLCWVLCGTEG*SHLSLC Trigger: ACACAGACTCAGGTGGGACAAGCCCTCAGTGCCACA...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS TCA 90 bp | ATGAGCCAGGTGCAGAAGGTTGCCTTGGGTGCCTGCTTGACCCACTaGTGTCTGGGAAGATTGGTGAAGCTGCTGGCCTGGCTTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: MSQVQKVALGACLTH*CLGRLVKLLAWLDG Trigger: CCCATCAAGCCAGGCCAGCAGCTTCACCAATCTTCCCAGACATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCACCTGGCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
||
| CDS GCA 90 bp | CTGGGGTGTGATAGGCTGTACTTGAAGGCCCTGAGTGCCACTTGCTaGTTGACTCGATGGCCCTGGGTTAGGCATCAGTGGAATGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGCDRLYLKALSATC*LTRWPWVRHQWNGP Trigger: GGGACCATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAAGTACAGCCTATCACACCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
||
| CDS GCA 90 bp | AGGTGGCAGCTTGGCCATGAGCCAGGTGCAGAAGGTTGCCTTGGGTaGCTGCTTGACCCACTGATGTCTGGGAAGATTGGTGAAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWQLGHEPGAEGCLG*LLDPLMSGKIGEAA Trigger: AGCAGCTTCACCAATCTTCCCAGACATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCACCTGGCTCATGGCCAAGCTGCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
||
| CDS GCA 90 bp | GACTGTGAGAGGTGGCAGCTTGGCCATGAGCCAGGTGCAGAAGGTTaGCTTGGGTGCCTGCTTGACCCACTGATGTCTGGGAAGATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DCERWQLGHEPGAEG*LGCLLDPLMSGKIG Trigger: ACCAATCTTCCCAGACATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCACCTGGCTCATGGCCAAGCTGCCACCTCTCACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | ACTCCCAATAAATTCCGTGAGATTCTGCATACCTGCTCGATGGCGGGCCTCAGCGGCCCTGAGTGCCACTaGCTGCTTGACTCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPNKFREILHTCSMAGLSGPECH*LLDSMA Trigger: GGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCC...GCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATTTATTGGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS GCA 90 bp | GAGCTGGGGTGTGATAGGCTGTACTTGAAGGCCCTGAGTGCCACTTaGTGCTTGACTCGATGGCCCTGGGTTAGGCATCAGTGGAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: ELGCDRLYLKALSAT*CLTRWPWVRHQWNG Trigger: ACCATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAAGTACAGCCTATCACACCCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
||
| CDS CCA 90 bp | TGTGAACTTGCTATGGAGCCCATGGCTGCTGCAGCAGCGGCGGCCTaGCTTGCTAGAGGATTATTAACCAGCTGTAGAGGGTTAGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: CELAMEPMAAAAAAA*LARGLLTSCRGLGG Trigger: ACCGCCTAACCCTCTACAGCTGGTTAATAATCCTCTAGCAAGCCAGGCCGCCGCTGCTGCAGCAGCCATGGGCTCCATAGCAAGTTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS CCA 90 bp | TTGAGGATCTGCTGGCCTGGCTTGATGGGGGACAGGGTGATACCCTaGGTGTTGATCACAGGCAAGATCTGGTTTCCGATGACGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRICWPGLMGDRVIP*VLITGKIWFPMTVA Trigger: TGCCACCGTCATCGGAAACCAGATCTTGCCTGTGATCAACACCCAGGGTATCACCCTGTCCCCCATCAAGCCAGGCCAGCAGATCCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CAA 90 bp | ATCCCAATCTCTGGTGTGGACCGTGAGCGCAGTTCCAGCCTCTGCTGGGTGTTGTGCTGCTACCAGCCCTaGGATGTTTGTGAGATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: IPISGVDRERSSSLCWVLCCYQP*DVCEIR Trigger: GCGAATCTCACAAACATCCAAGGGCTGGTAGCAGCA...CAACACCCAGCAGAGGCTGGAACTGCGCTCACGGTCCACACCAGAGATTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS GCA 90 bp | TGCTGTTGTTGCTGCTGCTGCTGTTGTTGCTGTTGCAGCTGGAGTTaGTGGAGCTGTTGCAGCTGGGAGTTCAGGGATGAGGTAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCSWS*WSCCSWEFRDEVAC Trigger: ACAAGCTACCTCATCCCTGAACTCCCAGCTGCAACAGCTCCAGCAACTCCAGCTGCAACAGCAACAACAGCAGCAGCAGCAACAACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS CCA 90 bp | AGGCTGTACTTGAAGGCCCTGAGTGCCACTTGCTGCTTGACTCGATaGCCCTGGGTTAGGCATCAGTGGAATGGTCCCAATAATCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLYLKALSATCCLTR*PWVRHQWNGPNNLS Trigger: GGACAGATTATTGGGACCATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAAGTACAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCAGGTGGCAGACTTGCATTCGCTTTGAACAGATACGAGTTTGTGTTGGCGTGCAGAAGGTTGCCTaGGGTGCCTGCTTGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSRWQTCIRFEQIRVCVGVQKVA*GACLTH Trigger: GTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCAC...GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | GCCGAGGTGGGCTCGTGTTGCTTTAAGCGTTTGATTGTGTTCTTTAGAGCTTGTCTCACCCGCTGCTGTTaGAGGATCTGCTGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEVGSCCFKRLIVFFRACLTRCC*RICWPG Trigger: GCCAGGCCAGCAGATCCTCAAACAGCAGCGGGTGAG...ACAAGCTCTAAAGAACACAATCAAACGCTTAAAGCAACACGAGCCCACCTCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS CCA 90 bp | TGTTGTTGCTGCTGCTGCTGTTGTTGCTGTTGCAGCTGGAGTTGCTaGAGCTGTTGCAGCTGGGAGTTCAGGGATGAGGTAGCTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCSWSC*SCCSWEFRDEVACR Trigger: TCTACAAGCTACCTCATCCCTGAACTCCCAGCTGCAACAGCTCCAGCAACTCCAGCTGCAACAGCAACAACAGCAGCAGCAGCAACAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS CCA 90 bp | TGTTGTTGCTGTTGTTGCTGCTGCTGCTGTTGTTGCTGTTGCAGCTaGAGTTGCTGGAGCTGTTGCAGCTGGGAGTTCAGGGATGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCS*SCWSCCSWEFRDEV Trigger: TACCTCATCCCTGAACTCCCAGCTGCAACAGCTCCAGCAACTCCAGCTGCAACAGCAACAACAGCAGCAGCAGCAACAACAGCAACAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS CCA 90 bp | TACTTGAAGGCCCTGAGTGCCACTTGCTGCTTGACTCGATGGCCCTaGGTTAGGCATCAGTGGAATGGTCCCAATAATCTGTCCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLKALSATCCLTRWP*VRHQWNGPNNLSLC Trigger: GCACAAGGACAGATTATTGGGACCATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGCCCTGAGTGCCACTaGCTGCTTGACTCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGPECH*LLDSMA Trigger: GGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAATTTGGCCCTGGGCATaGGTTAGGAGCTGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAFQTWQDTKGQGSVWLSIWPWA*VRSWGV Trigger: CACACCCCAGCTCCTAACCAATGCCCAGGGCCAAAT...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTGAGAGGTGGCAGCTaGGCCATGAGCCAGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVRGGS*AMSQVQ Trigger: CTGCACCTGGCTCATGGCCAAGCTGCCACCTCTCAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS CCA 90 bp | TTGATCACAGGCAAGATCTGGTTTCCGATGACGGTGGCAATGATTTaGCCCTGGGCATTGGTTAGGAGCTGGGGTGTGATAGGCTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LITGKIWFPMTVAMI*PWALVRSWGVIGCT Trigger: AGTACAGCCTATCACACCCCAGCTCCTAACCAATGCCCAGGGCCAAATCATTGCCACCGTCATCGGAAACCAGATCTTGCCTGTGATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTGGGTGCTGGCTGGTaGGTGGAGGAGGTGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVGAGW*VEEVVV Trigger: AACAACCACCTCCTCCACCAACCAGCCAGCACCCAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | GCCGAGGTGGGCTCGTGTTGCTTTAAGCGTTTGATTGTGTTCTTTAGAGCTTGTAGTGCCACTTGCTGCTaGACTCGATGGCCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AEVGSCCFKRLIVFFRACSATCC*TRWPWV Trigger: AACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACT...ACAAGCTCTAAAGAACACAATCAAACGCTTAAAGCAACACGAGCCCACCTCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGGGCTTCCTGTGGTAGGAAAAAGTGGCTTCTCAGGATGGTGTGTCTGCAGTGTGATAGGCTGTACTaGAAGGCCCTGAGTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SWASCGRKKWLLRMVCLQCDRLY*KALSAT Trigger: AGTGGCACTCAGGGCCTTCAAGTACAGCCTATCACA...CTGCAGACACACCATCCTGAGAAGCCACTTTTTCCTACCACAGGAAGCCCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGCTGCTGGCCTGGCTaGATGGGGGACAGGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPSCWPG*MGDRVI Trigger: TATCACCCTGTCCCCCATCAAGCCAGGCCAGCAGCT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTGCAGAAGGTTGCCTaGGGTGCCTGCTTGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVQKVA*GACLTH Trigger: GTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGCTGTCCCGCCATGTaGAAGGGGATGAGGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPSCPAM*KGMRIG Trigger: GCCAATCCTCATCCCCTTCAACATGGCGGGACAGCT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGGGGTGGGAGTGAGGTaGATGCTGTTGAGGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPGVGVR*MLLRLS Trigger: ACTCAGCCTCAACAGCATCAACCTCACTCCCACCCC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | GTGACCCTGGTGACCAGTCTAGATCACAGCACAGAGGATGAAATCATAAATCAGAGTGCCACTTGCTGCTaGACTCGATGGCCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VTLVTSLDHSTEDEIINQSATCC*TRWPWV Trigger: AACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACT...CTGATTTATGATTTCATCCTCTGTGCTGTGATCTAGACTGGTCACCAGGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGTGCCACTTGCTGCTaGACTCGATGGCCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPSATCC*TRWPWV Trigger: AACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAATTTGGCCCTGGGCATaGGTTAGGAGCTGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPIWPWA*VRSWGV Trigger: CACACCCCAGCTCCTAACCAATGCCCAGGGCCAAAT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCCAGGTGGCAGACTTGCATTCGCTTTGAACAGATACGAGTTTGTGTTGGCGTGATACCCTGGGTGTaGATCACAGGCAAGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRWQTCIRFEQIRVCVGVIPWV*ITGKIW Trigger: CCAGATCTTGCCTGTGATCAACACCCAGGGTATCAC...GCCAACACAAACTCGTATCTGTTCAAAGCGAATGCAAGTCTGCCACCTGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCTTTTCAAACCTGGCAGGATACAAAAGGCCAGGGTTCAGTTTGGCTGTCAGTGATACCCTGGGTGTaGATCACAGGCAAGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAFQTWQDTKGQGSVWLSVIPWV*ITGKIW Trigger: CCAGATCTTGCCTGTGATCAACACCCAGGGTATCAC...TGACAGCCAAACTGAACCCTGGCCTTTTGTATCCTGCCAGGTTTGAAAAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CAA 90 bp | TGTATTATTGTGTACTGTTTGCATGTGACAGATAAGCTGGCTTCCCTGGGAACAGTGAGAGGTGGCAGCTaGGCCATGAGCCAGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CIIVYCLHVTDKLASLGTVRGGS*AMSQVQ Trigger: CTGCACCTGGCTCATGGCCAAGCTGCCACCTCTCAC...TGTTCCCAGGGAAGCCAGCTTATCTGTCACATGCAAACAGTACACAATAATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGTGGCACTGAGGGCTaGTCCCACCTGAGTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCGTEG*SHLSLC Trigger: ACACAGACTCAGGTGGGACAAGCCCTCAGTGCCACA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | CAAGAACAGATGTACCCCAGCTCCAAATGTCTGTCAACACTGTCTGATGAAACAGAGTTGCTGGAGCTGTaGCAGCTGGGAGTTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QEQMYPSSKCLSTLSDETELLEL*QLGVQG Trigger: TCCCTGAACTCCCAGCTGCAACAGCTCCAGCAACTC...TGTTTCATCAGACAGTGTTGACAGACATTTGGAGCTGGGGTACATCTGTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | TATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAATGGGGCCCTGAGTGCCACTaGCTGCTTGACTCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSHFIREAAFRLALFCEWGPECH*LLDSMA Trigger: GGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCC...CCATTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | CAGATAAGCTGGCTTCCCTGGGAACATATGCTAACTCCACAGATCATATATAGAAGCTGCTGGCCTGGCTaGATGGGGGACAGGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: QISWLPWEHMLTPQIIYRSCWPG*MGDRVI Trigger: TATCACCCTGTCCCCCATCAAGCCAGGCCAGCAGCT...TCTATATATGATCTGTGGAGTTAGCATATGTTCCCAGGGAAGCCAGCTTATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | AATTCCGTGAGATTCTGCATACCTGCTCGATGGCGGGCCTCAGCCTCAGCCATCCGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSVRFCIPARWRASASAIRILKA*ANSRIS Trigger: AGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...GATGGCTGAGGCTGAGGCCCGCCATCGAGCAGGTATGCAGAATCTCACGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGGCCAGGGTTCAGTTaGGCTGTCAGACTGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPRPGFS*AVRLLA Trigger: AGCTAGCAGTCTGACAGCCAAACTGAACCCTGGCCT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACGCCGCTTGCGCTTTTaGGATGGCTCACTCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPRRLRF*DGSLPI Trigger: TATTGGGAGTGAGCCATCCAAAAAGCGCAAGCGGCG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGCTGCTACCAGCCCTaGGATGTTTGTGAGATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCCYQP*DVCEIR Trigger: GCGAATCTCACAAACATCCAAGGGCTGGTAGCAGCA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATGCTACCAGGATGTTGTTGGGGGGTGGGAGTGAGGTaGATGCTGTTGAGGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CWYLCSFCSCEMLPGCCWGVGVR*MLLRLS Trigger: ACTCAGCCTCAACAGCATCAACCTCACTCCCACCCC...CCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGTGATAGGCTGTACTaGAAGGCCCTGAGTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCDRLY*KALSAT Trigger: AGTGGCACTCAGGGCCTTCAAGTACAGCCTATCACA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTTTGCATGTGACAGATAAGCTGGCTTCCCTGGGAACATATGCTAACTCCTGTGATAGGCTGTACTaGAAGGCCCTGAGTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: YCLHVTDKLASLGTYANSCDRLY*KALSAT Trigger: AGTGGCACTCAGGGCCTTCAAGTACAGCCTATCACA...GGAGTTAGCATATGTTCCCAGGGAAGCCAGCTTATCTGTCACATGCAAACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAGTGATACCCTGGGTGTaGATCACAGGCAAGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPVIPWV*ITGKIW Trigger: CCAGATCTTGCCTGTGATCAACACCCAGGGTATCAC...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
||
| CDS-3UTR CAA 90 bp | TATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAATGGGTGCAGAAGGTTGCCTaGGGTGCCTGCTTGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YSHFIREAAFRLALFCEWVQKVA*GACLTH Trigger: GTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCAC...CCATTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | GACTATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAAAGTGCCACTTGCTGCTaGACTCGATGGCCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DYSHFIREAAFRLALFCESATCC*TRWPWV Trigger: AACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACT...TTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | GACTATAGCCATTTTATTAGGGAGGCAGCCTTCAGGCTTGCTTTATTTTGTGAAATTTGGCCCTGGGCATaGGTTAGGAGCTGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DYSHFIREAAFRLALFCEIWPWA*VRSWGV Trigger: CACACCCCAGCTCCTAACCAATGCCCAGGGCCAAAT...TTCACAAAATAAAGCAAGCCTGAAGGCTGCCTCCCTAATAAAATGGCTATAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | GACCCATGTATTATTGTGTACTGTTTGCATGTGACAGATAAGCTGGCTTCCCTGGTGATACCCTGGGTGTaGATCACAGGCAAGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DPCIIVYCLHVTDKLASLVIPWV*ITGKIW Trigger: CCAGATCTTGCCTGTGATCAACACCCAGGGTATCAC...CAGGGAAGCCAGCTTATCTGTCACATGCAAACAGTACACAATAATACATGGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
||
| CDS-3UTR CAA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATGGCCCTGAGTGCCACTaGCTGCTTGACTCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ADKSALVSMFQQVRSFQYGPECH*LLDSMA Trigger: GGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCC...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATGTGAGAGGTGGCAGCTaGGCCATGAGCCAGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ADKSALVSMFQQVRSFQYVRGGS*AMSQVQ Trigger: CTGCACCTGGCTCATGGCCAAGCTGCCACCTCTCAC...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTAGTGGGTGCTGGCTGGTaGGTGGAGGAGGTGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IGCHVSSIMKKMKMTTILVGAGW*VEEVVV Trigger: AACAACCACCTCCTCCACCAACCAGCCAGCACCCAC...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | TTTTTATTCTCTTTTGTGTTGTGTTGTGTGTGTGACCATGTGTTCACGACAGAAATTTGGCCCTGGGCATaGGTTAGGAGCTGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSFVLCCVCDHVFTTEIWPWA*VRSWGV Trigger: CACACCCCAGCTCCTAACCAATGCCCAGGGCCAAAT...TTCTGTCGTGAACACATGGTCACACACACAACACAACACAAAAGAGAATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATAGCTGTCCCGCCATGTaGAAGGGGATGAGGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ADKSALVSMFQQVRSFQYSCPAM*KGMRIG Trigger: GCCAATCCTCATCCCCTTCAACATGGCGGGACAGCT...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
||
| CDS-3UTR CAA 90 bp | TTTCTATGCCATTTATATAGTCCAAGAACAGATGTACCCCAGCTCCAAATGTCTTGTGATAGGCTGTACTaGAAGGCCCTGAGTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FLCHLYSPRTDVPQLQMSCDRLY*KALSAT Trigger: AGTGGCACTCAGGGCCTTCAAGTACAGCCTATCACA...AGACATTTGGAGCTGGGGTACATCTGTTCTTGGACTATATAAATGGCATAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCACGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPRILKA*ANSRIS Trigger: AGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCAAGAGCTTGTCTCTTATaGCAGAACCAAACTCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPRACLL*QNQTLT Trigger: AGTTAGAGTTTGGTTCTGCAATAAGAGACAAGCTCT...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS-3UTR CAA 90 bp | TTTTTGTGGAGATTCAGGGTAGTGCTCAGTTTCTGTGATGCTTCCTTCCGACCATGTTGCTTTAAGCGTTaGATTGTGTTCTTTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLWRFRVVLSFCDASFRPCCFKR*IVFFRA Trigger: AGCTCTAAAGAACACAATCAAACGCTTAAAGCAACA...TGGTCGGAAGGAAGCATCACAGAAACTGAGCACTACCCTGAATCTCCACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS-3UTR CAA 90 bp | TGCTGGTATTTGTGCAGTTTTTGCAGTTGTGAAATGCTACCAGGATGTTGTTGGCGGATTTTAAAAGCTTaGGCAAATTCTCGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CWYLCSFCSCEMLPGCCWRILKA*ANSRIS Trigger: AGAGATCCGAGAATTTGCCAAAGCTTTTAAAATCCG...CCAACAACATCCTGGTAGCATTTCACAACTGCAAAAACTGCACAAATACCAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| CDS-3UTR CAA 90 bp | GCAGATAAGTCAGCTTTGGTTTCAATGTTTCAACAAGTAAGGAGCTTTCAATATAGAGCTTGTCTCTTATaGCAGAACCAAACTCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: ADKSALVSMFQQVRSFQYRACLL*QNQTLT Trigger: AGTTAGAGTTTGGTTCTGCAATAAGAGACAAGCTCT...ATATTGAAAGCTCCTTACTTGTTGAAACATTGAAACCAAAGCTGACTTATCTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| CDS-3UTR CAA 90 bp | ATCGGCTGTCATGTCTCATCAATAATGAAGAAGATGAAGATGACGACAATTTTATGTTGCTTTAAGCGTTaGATTGTGTTCTTTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGCHVSSIMKKMKMTTILCCFKR*IVFFRA Trigger: AGCTCTAAAGAACACAATCAAACGCTTAAAGCAACA...TAAAATTGTCGTCATCTTCATCTTCTTCATTATTGATGAGACATGACAGCCGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139064.10 |
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| CDS GCA 72 bp | CCTCCCGGCATCACCCCGGCCACAGCAGAGGCTAACTaGTGTGCCGTCAGAAGAGGCTGTGGCCCAACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPGITPATAEAN*CAVRRGCGPTG Trigger: TCCAGTTGGGCCACAGCCTCTTCTGACGGCACAGCAGTTAGCCTCTGCTGTGGCCGGGGTGATGCCGGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS CCA 72 bp | GACTGTGGGGGTGCCTGTGAGGCTGGCTGTGGGTGCTaGCTGGTTGGTGGAGGAGGTGGTTGTTGTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DCGGACEAGCGC*LVGGGGGCCCC Trigger: GCAGCAACAACAACCACCTCCTCCACCAACCAGCCAGCACCCACAGCCAGCCTCACAGGCACCCCCACAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS CCA 72 bp | TGGAGAGGGCATTGCCAAAGGCCTGTGAACTTGCTATaGAGCCCATGGCTGCTGCAGCAGCGGCGGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WRGHCQRPVNLL*SPWLLQQRRPG Trigger: GCCAGGCCGCCGCTGCTGCAGCAGCCATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAATGCCCTCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 |
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| CDS CAA 90 bp | GGAGGAGGAGGAAGCCTGTCGCACGGGACTGTGAGAGGTGGCAGCTaGGCCATGAGCCAGGTGCAGAAGGTTGCCTTGGGTGCCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGGGSLSHGTVRGGS*AMSQVQKVALGACL Trigger: CAAGCAGGCACCCAAGGCAACCTTCTGCACCTGGCTCATGGCCAAGCTGCCACCTCTCACAGTCCCGTGCGACAGGCTTCCTCCTCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
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| CDS CCA 72 bp | GTGCCGTCAGAAGAGGCTGTGGCCCAACTGGAAAGGTaGGATGGGTCTGACAGGCCTGGTGCTGGTCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VPSEEAVAQLER*DGSDRPGAGQE Trigger: CTCCTGACCAGCACCAGGCCTGTCAGACCCATCCCACCTTTCCAGTTGGGCCACAGCCTCTTCTGACGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS CAA 72 bp | GAAGGCTGGAGAGGGCATTGCCAAAGGCCTGTGAACTaGCTATGGAGCCCATGGCTGCTGCAGCAGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: EGWRGHCQRPVN*LWSPWLLQQRR Trigger: CCGCCGCTGCTGCAGCAGCCATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAATGCCCTCTCCAGCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 |
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| CDS CAA 72 bp | GGAAGCCTGTCGCACGGGACTGTGAGAGGTGGCAGCTaGGCCATGAGCCAGGTGCAGAAGGTTGCCTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSLSHGTVRGGS*AMSQVQKVALG Trigger: ACCCAAGGCAACCTTCTGCACCTGGCTCATGGCCAAGCTGCCACCTCTCACAGTCCCGTGCGACAGGCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
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| CDS TCA 72 bp | CCCCTGAAGGCTGGAGAGGGCATTGCCAAAGGCCTGTaGACTTGCTATGGAGCCCATGGCTGCTGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLKAGEGIAKGL*TCYGAHGCCSS Trigger: GCTGCTGCAGCAGCCATGGGCTCCATAGCAAGTTCACAGGCCTTTGGCAATGCCCTCTCCAGCCTTCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 |
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| CDS GCA 72 bp | AGGTGGCAGCTTGGCCATGAGCCAGGTGCAGAAGGTTaGCTTGGGTGCCTGCTTGACCCACTGATGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWQLGHEPGAEG*LGCLLDPLMSG Trigger: CCCAGACATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCACCTGGCTCATGGCCAAGCTGCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
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| CDS TCA 72 bp | AGAGGCTGTGGCCCAACTGGAAAGGTGGGATGGGTCTaGCAGGCCTGGTGCTGGTCAGGAGTTCCTGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: RGCGPTGKVGWV*QAWCWSGVPGS Trigger: AGATCCAGGAACTCCTGACCAGCACCAGGCCTGTCAGACCCATCCCACCTTTCCAGTTGGGCCACAGCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS CCA 72 bp | GCTATGGAGCCCATGGCTGCTGCAGCAGCGGCGGCCTaGCTTGCTAGAGGATTATTAACCAGCTGTAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AMEPMAAAAAAA*LARGLLTSCRG Trigger: CCCTCTACAGCTGGTTAATAATCCTCTAGCAAGCCAGGCCGCCGCTGCTGCAGCAGCCATGGGCTCCATAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS CCA 72 bp | GTGATGTCCAGCTTTTCAAACCTGCAGATGGCCGACTaGCTGTATGCGGGGCCCTCTGTGGCACTGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VMSSFSNLQMAD*LYAGPSVALRA Trigger: AGCCCTCAGTGCCACAGAGGGCCCCGCATACAGCCAGTCGGCCATCTGCAGGTTTGAAAAGCTGGACATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175703.9 |
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| CDS TCA 72 bp | GTGCAGAAGGTTGCCTTGGGTGCCTGCTTGACCCACTaGTGTCTGGGAAGATTGGTGAAGCTGCTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VQKVALGACLTH*CLGRLVKLLAW Trigger: CCAGGCCAGCAGCTTCACCAATCTTCCCAGACATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
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| CDS GCA 72 bp | GATAGGCTGTACTTGAAGGCCCTGAGTGCCACTTGCTaGTTGACTCGATGGCCCTGGGTTAGGCATCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: DRLYLKALSATC*LTRWPWVRHQW Trigger: CCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAAGTACAGCCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS GCA 72 bp | CTTGGCCATGAGCCAGGTGCAGAAGGTTGCCTTGGGTaGCTGCTTGACCCACTGATGTCTGGGAAGATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGHEPGAEGCLG*LLDPLMSGKIG Trigger: ACCAATCTTCCCAGACATCAGTGGGTCAAGCAGGCACCCAAGGCAACCTTCTGCACCTGGCTCATGGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
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| CDS CCA 72 bp | ATGGGTCTGACAGGCCTGGTGCTGGTCAGGAGTTCCTaGATCTGGCAAGACTGTGTTTCCTCTGGCCCCTAN | + |
|
Preference number: 6 (lower is better) Translates to: MGLTGLVLVRSS*IWQDCVSSGPX Trigger: NTAGGGGCCAGAGGAAACACAGTCTTGCCAGATCCAGGAACTCCTGACCAGCACCAGGCCTGTCAGACCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS CCA 72 bp | TGCTGGCCTGGCTTGATGGGGGACAGGGTGATACCCTaGGTGTTGATCACAGGCAAGATCTGGTTTCCGATG | + |
|
Preference number: 6 (lower is better) Translates to: CWPGLMGDRVIP*VLITGKIWFPM Trigger: CATCGGAAACCAGATCTTGCCTGTGATCAACACCCAGGGTATCACCCTGTCCCCCATCAAGCCAGGCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CAA 72 bp | CCTGGCTTGATGGGGGACAGGGTGATACCCTGGGTGTaGATCACAGGCAAGATCTGGTTTCCGATGACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGLMGDRVIPWV*ITGKIWFPMTV Trigger: CACCGTCATCGGAAACCAGATCTTGCCTGTGATCAACACCCAGGGTATCACCCTGTCCCCCATCAAGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CAA 90 bp | GGGTGTGATAGGCTGTACTTGAAGGCCCTGAGTGCCACTTGCTGCTaGACTCGATGGCCCTGGGTTAGGCATCAGTGGAATGGTCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GCDRLYLKALSATCC*TRWPWVRHQWNGPN Trigger: ATTGGGACCATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAAGTACAGCCTATCACACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CAA 90 bp | AGCTGCTGGCCTGGCTTGATGGGGGACAGGGTGATACCCTGGGTGTaGATCACAGGCAAGATCTGGTTTCCGATGACGGTGGCAATGATT | + |
|
Preference number: 6 (lower is better) Translates to: SCWPGLMGDRVIPWV*ITGKIWFPMTVAMI Trigger: AATCATTGCCACCGTCATCGGAAACCAGATCTTGCCTGTGATCAACACCCAGGGTATCACCCTGTCCCCCATCAAGCCAGGCCAGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000184299.2 |
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| CDS GCA 72 bp | TGTGATAGGCTGTACTTGAAGGCCCTGAGTGCCACTTaGTGCTTGACTCGATGGCCCTGGGTTAGGCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: CDRLYLKALSAT*CLTRWPWVRHQ Trigger: CTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAAGTACAGCCTATCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CCA 72 bp | TGCTGCTGCTGTTGTTGCTGTTGCAGCTGGAGTTGCTaGAGCTGTTGCAGCTGGGAGTTCAGGGATGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCCCSWSC*SCCSWEFRDEV Trigger: TACCTCATCCCTGAACTCCCAGCTGCAACAGCTCCAGCAACTCCAGCTGCAACAGCAACAACAGCAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS CCA 72 bp | GCCCTGAGTGCCACTTGCTGCTTGACTCGATGGCCCTaGGTTAGGCATCAGTGGAATGGTCCCAATAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALSATCCLTRWP*VRHQWNGPNNL Trigger: CAGATTATTGGGACCATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CCA 72 bp | TTGAAGGCCCTGAGTGCCACTTGCTGCTTGACTCGATaGCCCTGGGTTAGGCATCAGTGGAATGGTCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LKALSATCCLTR*PWVRHQWNGPN Trigger: ATTGGGACCATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CAA 72 bp | AGGCTGTACTTGAAGGCCCTGAGTGCCACTTGCTGCTaGACTCGATGGCCCTGGGTTAGGCATCAGTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RLYLKALSATCC*TRWPWVRHQWN Trigger: ATTCCACTGATGCCTAACCCAGGGCCATCGAGTCAAGCAGCAAGTGGCACTCAGGGCCTTCAAGTACAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CAA 90 bp | ATCTGCTGGCCTGGCTTGATGGGGGACAGGGTGATACCCTGGGTGTaGATCACAGGCAAGATCTGGTTTCCGATGACGGTGGCAATGATT | + |
|
Preference number: 6 (lower is better) Translates to: ICWPGLMGDRVIPWV*ITGKIWFPMTVAMI Trigger: AATCATTGCCACCGTCATCGGAAACCAGATCTTGCCTGTGATCAACACCCAGGGTATCACCCTGTCCCCCATCAAGCCAGGCCAGCAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176795.8 |
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| CDS GCA 72 bp | TGCTGGCTGGTTGGTGGAGGAGGTGGTTGTTGTTGCTaGTGTTGTTGTTGCTGTTGTTGCTGCTGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CWLVGGGGGCCC*CCCCCCCCCCC Trigger: ACAGCAGCAGCAGCAACAACAGCAACAACAACAGCAGCAACAACAACCACCTCCTCCACCAACCAGCCAGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 |
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| CDS CCA 72 bp | ATCTGGTTTCCGATGACGGTGGCAATGATTTGGCCCTaGGCATTGGTTAGGAGCTGGGGTGTGATAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IWFPMTVAMIWP*ALVRSWGVIGC Trigger: ACAGCCTATCACACCCCAGCTCCTAACCAATGCCCAGGGCCAAATCATTGCCACCGTCATCGGAAACCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CCA 72 bp | GGCAAGATCTGGTTTCCGATGACGGTGGCAATGATTTaGCCCTGGGCATTGGTTAGGAGCTGGGGTGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: GKIWFPMTVAMI*PWALVRSWGVI Trigger: TATCACACCCCAGCTCCTAACCAATGCCCAGGGCCAAATCATTGCCACCGTCATCGGAAACCAGATCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000139064.10 ENSMUST00000175703.9 ENSMUST00000176795.8 ENSMUST00000184299.2 |
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| CDS CCA 72 bp | TGTTCTCCTTTATTTCCTCTGACACTGCTGACTAACTaGCCCACGCTCAAAGCTGAAGAAGAGGAGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSPLFPLTLLTN*PTLKAEEEEDE Trigger: TTCATCCTCCTCTTCTTCAGCTTTGAGCGTGGGCCAGTTAGTCAGCAGTGTCAGAGGAAATAAAGGAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184299.2 |
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