Pregenerated sensors for POU4F3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024497Ensembl transcript IDs: ENSMUST00000025374.4, ENSMUST00000237247.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTCGGGTCATTTCTCAAGCCTGTGTGTCTCAGGGCTGCAGGCCTaGGGTCCTGCTGTCTCAAGAGCAAGACCGAGTTTCAGCACCACG | + |
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Preference number: 1 (lower is better) Translates to: WSGHFSSLCVSGLQA*GPAVSRARPSFSTT Trigger: CGTGGTGCTGAAACTCGGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGCAGCCCTGAGACACACAGGCTTGAGAAATGACCCGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR GCA 90 bp | CGGTCGGATGGTCGGGTCATTTCTCAAGCCTGTGTGTCTCAGGGCTaGAGGCCTGAGGTCCTGCTGTCTCAAGAGCAAGACCGAGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RSDGRVISQACVSQG*RPEVLLSQEQDRVS Trigger: TGAAACTCGGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGCAGCCCTGAGACACACAGGCTTGAGAAATGACCCGACCATCCGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR GCA 90 bp | GCGGGAACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTaGTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: AGTVATEEKGPVLWS*SCRCSKVYGNFHKR Trigger: TCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTTCCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR CCA 90 bp | GGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATaGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAACGCA | + |
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Preference number: 1 (lower is better) Translates to: GSSSVVLLLPLLKSI*ELPQETHIAGQGNA Trigger: TGCGTTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR TCA 90 bp | GTCACTTGCGAACACTGGGCGGACATTCTGACCAGAGCAGTGAGCTaGGATGAGGGACACTTCTTCATCTGGTCTGATCTGAAACCACCA | + |
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Preference number: 1 (lower is better) Translates to: VTCEHWADILTRAVS*DEGHFFIWSDLKPP Trigger: TGGTGGTTTCAGATCAGACCAGATGAAGAAGTGTCCCTCATCTCAGCTCACTGCTCTGGTCAGAATGTCCGCCCAGTGTTCGCAAGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR CCA 90 bp | AAATTCGCGGGAACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTaGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: KFAGTVATEEKGPVL*SCSCRCSKVYGNFH Trigger: GTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTTCCCGCGAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR TCA 90 bp | AAGGCAAATAAATACTCAGTTTCCGGAAGGTCGATGAAGATAACCTaGGCTAGCGCTGGCTTCTGCTCACCAACAGTCAAGAAGACATCG | + |
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Preference number: 1 (lower is better) Translates to: KANKYSVSGRSMKIT*ASAGFCSPTVKKTS Trigger: CGATGTCTTCTTGACTGTTGGTGAGCAGAAGCCAGCGCTAGCTCAGGTTATCTTCATCGACCTTCCGGAAACTGAGTATTTATTTGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR TCA 90 bp | TTCGCGGGAACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTCAGGGCTGCAGGCCTaGGGTCCTGCTGTCTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: FAGTVATEEKGPVLWSCSSGLQA*GPAVSR Trigger: TCTTGAGACAGCAGGACCTCAGGCCTGCAGCCCTGA...AGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTTCCCGCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAGGCCTGAGGTCCTGCTGTCTCAAGAGCAAGACCGAGTTTCAGCACCACGGAAAGAACCTGACCTaGCAGGAAACACCCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AAGLRSCCLKSKTEFQHHGKNLT*QETPWS Trigger: ACTCCAGGGTGTTTCCTGGCAGGTCAGGTTCTTTCC...GTGGTGCTGAAACTCGGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTGAACTCCCAACACCTTaGACACTGTCCCTGAACTTA | + |
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Preference number: 2 (lower is better) Translates to: LWPQRKRVQFCGPALAAAELPTP*TLSLNL Trigger: TAAGTTCAGGGACAGTGTGCAAGGTGTTGGGAGTTC...AGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGAACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCTGCCTAGCCAAGAAGTaGTACTTTCTCCTTACGGTC | + |
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Preference number: 2 (lower is better) Translates to: RELWPQRKRVQFCGPALACLAKK*YFLLTV Trigger: GACCGTAAGGAGAAAGTACCACTTCTTGGCTAGGCA...GGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAATCAGGGCTGCAGGCCTaGGGTCCTGCTGTCTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SSVVLLLPLLKSIWELPQSGLQA*GPAVSR Trigger: TCTTGAGACAGCAGGACCTCAGGCCTGCAGCCCTGA...TTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGCAGGCCTGAGGTCCTaGTGTCTCAAGAGCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: RKRVQFCGPALAAAQKYMAGLRS*CLKSKT Trigger: GGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGC...CATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR CAA 90 bp | AACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTaGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAGAGACACAC | + |
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Preference number: 2 (lower is better) Translates to: NCGHRGKGSSSVVLL*PLLKSIWELPQETH Trigger: GTGTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAAAGAACCTGACCTaGCAGGAAACACCCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: RKRVQFCGPALAAAQKYMGKNLT*QETPWS Trigger: ACTCCAGGGTGTTTCCTGGCAGGTCAGGTTCTTTCC...CATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR CAA 90 bp | CCTGGAAATCCTACTAACCCCCAACAACCCAGAACTCCCAACACCTaGCACACTGTCCCTGAACTTAACCCATGCTACTTATTTATGAGA | + |
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Preference number: 2 (lower is better) Translates to: PGNPTNPQQPRTPNT*HTVPELNPCYLFMR Trigger: TCTCATAAATAAGTAGCATGGGTTAAGTTCAGGGACAGTGTGCAAGGTGTTGGGAGTTCTGGGTTGTTGGGGGTTAGTAGGATTTCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCAAAAGTATATGGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAATGCCTAGCCAAGAAGTaGTACTTTCTCCTTACGGTC | + |
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Preference number: 2 (lower is better) Translates to: AQKYMGTSTRDTHSGTGKCLAKK*YFLLTV Trigger: GACCGTAAGGAGAAAGTACCACTTCTTGGCTAGGCA...TTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAAACCAACCGATACAATaGGAAGAATTCAGGCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SSVVLLLPLLKSIWELPQNQPIQ*EEFRRR Trigger: TCTGCGCCTGAATTCTTCCCATTGTATCGGTTGGTT...TTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR TCA 90 bp | TATCTATTCCAGAAACCAAAGGTCACACGGCAACACACAAACTACATGAAGCAAACCAGAGCAGTGAGCTaGGATGAGGGACACTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: YLFQKPKVTRQHTNYMKQTRAVS*DEGHFF Trigger: GAAGAAGTGTCCCTCATCTCAGCTCACTGCTCTGGT...TTGCTTCATGTAGTTTGTGTGTTGCCGTGTGACCTTTGGTTTCTGGAATAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAGAGACACGGAAGGATTTGCATATaGTTCCTGAAGTTACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: WSCSCRCSKVYGNFHKRHGRICI*FLKLQS Trigger: TGACTGTAACTTCAGGAATCATATGCAAATCCTTCC...GTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR TCA 90 bp | TATCTATTCCAGAAACCAAAGGTCACACGGCAACACACAAACTACATGAAGCAAAGCAGTGAGCTGAGATaGGGGACACTTCTTCATCTG | + |
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Preference number: 2 (lower is better) Translates to: YLFQKPKVTRQHTNYMKQSSELR*GTLLHL Trigger: CAGATGAAGAAGTGTCCCTCATCTCAGCTCACTGCT...TTGCTTCATGTAGTTTGTGTGTTGCCGTGTGACCTTTGGTTTCTGGAATAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCAAAAGTATATGGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAACCTGAACTTAACCCATaGTACTTATTTATGAGAATG | + |
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Preference number: 2 (lower is better) Translates to: AQKYMGTSTRDTHSGTGKPELNP*YLFMRM Trigger: CATTCTCATAAATAAGTAGCATGGGTTAAGTTCAGG...TTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR GCA 72 bp | AAGCCTGTGTGTCTCAGGGCTGCAGGCCTGAGGTCCTaGTGTCTCAAGAGCAAGACCGAGTTTCAGCACCAC | + |
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Preference number: 3 (lower is better) Translates to: KPVCLRAAGLRS*CLKSKTEFQHH Trigger: GTGGTGCTGAAACTCGGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGCAGCCCTGAGACACACAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR TCA 72 bp | CATTTCTCAAGCCTGTGTGTCTCAGGGCTGCAGGCCTaGGGTCCTGCTGTCTCAAGAGCAAGACCGAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: HFSSLCVSGLQA*GPAVSRARPSF Trigger: GAAACTCGGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGCAGCCCTGAGACACACAGGCTTGAGAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR TCA 72 bp | GAACACTGGGCGGACATTCTGACCAGAGCAGTGAGCTaGGATGAGGGACACTTCTTCATCTGGTCTGATCTG | + |
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Preference number: 3 (lower is better) Translates to: EHWADILTRAVS*DEGHFFIWSDL Trigger: CAGATCAGACCAGATGAAGAAGTGTCCCTCATCTCAGCTCACTGCTCTGGTCAGAATGTCCGCCCAGTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR CCA 72 bp | TCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATaGGAACTTCCACAAGAGACACACATAGCGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: SVVLLLPLLKSI*ELPQETHIAGQ Trigger: CTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR TCA 72 bp | GCTGAGATGAGGGACACTTCTTCATCTGGTCTGATCTaGAACCACCAACCTCGCCCCTCCAAAAGGCAAATA | + |
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Preference number: 3 (lower is better) Translates to: AEMRDTSSSGLI*NHQPRPSKRQI Trigger: TATTTGCCTTTTGGAGGGGCGAGGTTGGTGGTTTCAGATCAGACCAGATGAAGAAGTGTCCCTCATCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR GCA 72 bp | GAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTaGTCAAAAGTATATGGGAACTTCCACAAGAGACAC | + |
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Preference number: 3 (lower is better) Translates to: EKGPVLWSCSCR*SKVYGNFHKRH Trigger: GTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR GCA 72 bp | ACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTaGCGCTGCTCAAAAGTATATGGGAACTTCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: TEEKGPVLWSCS*RCSKVYGNFHK Trigger: CTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR TCA 72 bp | AAATACTCAGTTTCCGGAAGGTCGATGAAGATAACCTaGGCTAGCGCTGGCTTCTGCTCACCAACAGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: KYSVSGRSMKIT*ASAGFCSPTVK Trigger: CTTGACTGTTGGTGAGCAGAAGCCAGCGCTAGCTCAGGTTATCTTCATCGACCTTCCGGAAACTGAGTATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR GCA 72 bp | AAGGATTTGCATATGATTCCTGAAGTTACAGTCACTTaGGAACACTGGGCGGACATTCTGACCAGAGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: KDLHMIPEVTVT*EHWADILTRAV Trigger: CACTGCTCTGGTCAGAATGTCCGCCCAGTGTTCGCAAGTGACTGTAACTTCAGGAATCATATGCAAATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAGAGACACATGTGTAGGAAGGATTaGCATATGATTCCTGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: WSCSCRCSKVYGNFHKRHMCRKD*HMIPEV Trigger: AACTTCAGGAATCATATGCAAATCCTTCCTACACAT...GTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR TCA 72 bp | ACACTGTCCCTGAACTTAACCCATGCTACTTATTTATaGGAATGTACGGTAAACCAACCGATACAATGGGAA | + |
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Preference number: 3 (lower is better) Translates to: TLSLNLTHATYL*ECTVNQPIQWE Trigger: TTCCCATTGTATCGGTTGGTTTACCGTACATTCTCATAAATAAGTAGCATGGGTTAAGTTCAGGGACAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR-3UTR CAA 90 bp | TATCTATTCCAGAAACCAAAGGTCACACGGCAACACACAAACTACATGAAGCAAATGTGTAGGAAGGATTaGCATATGATTCCTGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: YLFQKPKVTRQHTNYMKQMCRKD*HMIPEV Trigger: AACTTCAGGAATCATATGCAAATCCTTCCTACACAT...TTGCTTCATGTAGTTTGTGTGTTGCCGTGTGACCTTTGGTTTCTGGAATAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR TCA 90 bp | CGGGAACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGTGAGTGCAGCCGGGTaGGAGATGGGCACCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RELWPQRKRVQFCGPALAVSAAG*EMGTVG Trigger: GCCCACGGTGCCCATCTCTCACCCGGCTGCACTCAC...GGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTTCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR GCA 90 bp | TTCGCGGGAACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTGCCGGCATCACCGAGTaGTCCGGGGCCCCTAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FAGTVATEEKGPVLWSCSAGITE*SGAPRP Trigger: TGGCCTAGGGGCCCCGGAGCACTCGGTGATGCCGGC...AGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTTCCCGCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR TCA 90 bp | CTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTCCCATGGCGCCTAGATaGTGCGGGTGGATCTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LWPQRKRVQFCGPALAAAPMAPR*CGWICA Trigger: GGCGCAGATCCACCCGCATCATCTAGGCGCCATGGG...AGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR GCA 90 bp | AACGTCCCCTCCCATCGGAAGGGGGCGATGCCATTAGGCTCTCCAGGCTCCTCCTCTTGCAGTACGGGGTaGATGCCGAAAGGCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: NVPSHRKGAMPLGSPGSSSCSTG*MPKGCL Trigger: CAAGCAGCCTTTCGGCATGCACCCCGTACTGCAAGA...GGAGGAGCCTGGAGAGCCTAATGGCATCGCCCCCTTCCGATGGGAGGGGACGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS-3UTR GCA 90 bp | CTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTGCGCGGCGATGGACGTaGGTTTGCGCTTACGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LWPQRKRVQFCGPALAAAARRWT*VCAYAH Trigger: GTGAGCGTAAGCGCAAACGCACGTCCATCGCCGCGC...AGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CCA 90 bp | CGGGAACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCCTGCAGCTGCGGGGCTaGGAGACAAACTCGGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: RELWPQRKRVQFCGPALALQLRG*ETNSAH Trigger: ATGCGCCGAGTTTGTCTCCCAGCCCCGCAGCTGCAG...GGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS-3UTR TCA 90 bp | TTACGGTCGGATGGTCGGGTCATTTCTCAAGCCTGTGTGTCTCAGGGCTGCAGGCTCATGCCCATGGCCTaGTGCAAGTGGCCCATGGCG | + |
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Preference number: 4 (lower is better) Translates to: LRSDGRVISQACVSQGCRLMPMA*CKWPMA Trigger: CGCCATGGGCCACTTGCATCAGGCCATGGGCATGAG...CCTGCAGCCCTGAGACACACAGGCTTGAGAAATGACCCGACCATCCGACCGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR TCA 90 bp | GGGAAAGAACCTGACCTGCCAGGAAACACCCTGGAGTGTCCCGTAACGTCCCCTGAAATAGGCTTCGAGTaGGCGCTTCTCTGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GKEPDLPGNTLECPVTSPEIGFE*ALLWRG Trigger: GCCGCGCCAGAGAAGCGCTCACTCGAAGCCTATTTC...AGGGGACGTTACGGGACACTCCAGGGTGTTTCCTGGCAGGTCAGGTTCTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR TCA 90 bp | TTACGGTCGGATGGTCGGGTCATTTCTCAAGCCTGTGTGTCTCAGGGCTGCAGGGAAATAGGCTTCGAGTaGGCGCTTCTCTGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LRSDGRVISQACVSQGCREIGFE*ALLWRG Trigger: GCCGCGCCAGAGAAGCGCTCACTCGAAGCCTATTTC...CCTGCAGCCCTGAGACACACAGGCTTGAGAAATGACCCGACCATCCGACCGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR TCA 90 bp | TTACGGTCGGATGGTCGGGTCATTTCTCAAGCCTGTGTGTCTCAGGGCTGCAGGCGCGATCTTCTCGGATaGAGGACGTGGCTGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LRSDGRVISQACVSQGCRRDLLG*RTWLDG Trigger: GCCATCCAGCCACGTCCTTCATCCGAGAAGATCGCG...CCTGCAGCCCTGAGACACACAGGCTTGAGAAATGACCCGACCATCCGACCGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR GCA 90 bp | CTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTAGCGTGGGCGAGATGTaGTCAAGTAAGTCGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LWPQRKRVQFCGPALAAASVGEM*SSKSPS Trigger: CGAGGGCGACTTACTTGAGCACATCTCGCCCACGCT...AGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGAACCTGACCTGCCAGGAAACACCCTGGAGTGTCCCGTAACGTCCCCTTGCATGCCGAAAGGCTaGTTGGCGTTCATGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GKEPDLPGNTLECPVTSPCMPKG*LAFMAI Trigger: GATGGCCATGAACGCCAAGCAGCCTTTCGGCATGCA...AGGGGACGTTACGGGACACTCCAGGGTGTTTCCTGGCAGGTCAGGTTCTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR CCA 90 bp | TTCGCGGGAACTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTGACAAACTCGGCGCATaGCCTCAGAGCCGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FAGTVATEEKGPVLWSCSDKLGA*PQSRSV Trigger: TACACTCCGGCTCTGAGGCCATGCGCCGAGTTTGTC...AGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAGTTCCCGCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCTGAGGTCCTGCTGTCTCAAGAGCAAGACCGAGTTTCAGCACCACCACTCACGCTCAGCGTaGGCGAGATGTGCTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AAGLRSCCLKSKTEFQHHHSRSA*ARCAQV Trigger: TACTTGAGCACATCTCGCCCACGCTGAGCGTGAGTG...GTGGTGCTGAAACTCGGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTCACTCACGCTCAGCGTaGGCGAGATGTGCTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LWPQRKRVQFCGPALAAAHSRSA*ARCAQV Trigger: TACTTGAGCACATCTCGCCCACGCTGAGCGTGAGTG...AGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTGGCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR CCA 90 bp | TTACGGTCGGATGGTCGGGTCATTTCTCAAGCCTGTGTGTCTCAGGGCTGCAGGGGTGACTCATGCCCATaGCCTGATGCAAGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSDGRVISQACVSQGCRGDSCP*PDASGP Trigger: TGGGCCACTTGCATCAGGCCATGGGCATGAGTCACC...CCTGCAGCCCTGAGACACACAGGCTTGAGAAATGACCCGACCATCCGACCGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGGCCTGAGGTCCTGCTGTCTCAAGAGCAAGACCGAGTTTCAGCACCACGTAGGCTGGAGAATTTaGGTTCTTGCAGTACGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AAGLRSCCLKSKTEFQHHVGWRI*VLAVRG Trigger: ACCCCGTACTGCAAGAACCCAAATTCTCCAGCCTAC...GTGGTGCTGAAACTCGGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR CCA 90 bp | GCGCTGGCTTCTGCTCACCAACAGTCAAGAAGACATCGCAAGTATTTTCAGTCTTCCTCCAGCCAGGCCTaGAGGACCGGCTTGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ALASAHQQSRRHRKYFQSSSSQA*RTGLRA Trigger: CGCTCTCAAGCCGGTCCTCCAGGCCTGGCTGGAGGA...AGACTGAAAATACTTGCGATGTCTTCTTGACTGTTGGTGAGCAGAAGCCAGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR CCA 90 bp | TTACGGTCGGATGGTCGGGTCATTTCTCAAGCCTGTGTGTCTCAGGGCTGCAGGGCCGTTGAAGAGCTCTaGCTTGCTGTTCTTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRSDGRVISQACVSQGCRAVEEL*LAVLLS Trigger: CGAGAGAAGAACAGCAAGCCAGAGCTCTTCAACGGC...CCTGCAGCCCTGAGACACACAGGCTTGAGAAATGACCCGACCATCCGACCGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGGCCCACCTCGCCTGGAAATCCTACTAACCCCCAACAACCCAGAACTCCCGCCGTTGAAGAGCTCTaGCTTGCTGTTCTTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VRPTSPGNPTNPQQPRTPAVEEL*LAVLLS Trigger: CGAGAGAAGAACAGCAAGCCAGAGCTCTTCAACGGC...GGGAGTTCTGGGTTGTTGGGGGTTAGTAGGATTTCCAGGCGAGGTGGGCCTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAACGCGATCTTCTCGGATaGAGGACGTGGCTGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVVLLLPLLKSIWELPQRDLLG*RTWLDG Trigger: GCCATCCAGCCACGTCCTTCATCCGAGAAGATCGCG...TTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR GCA 90 bp | TATCTATTCCAGAAACCAAAGGTCACACGGCAACACACAAACTACATGAAGCAAGCCGGCATCACCGAGTaGTCCGGGGCCCCTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLFQKPKVTRQHTNYMKQAGITE*SGAPRP Trigger: TGGCCTAGGGGCCCCGGAGCACTCGGTGATGCCGGC...TTGCTTCATGTAGTTTGTGTGTTGCCGTGTGACCTTTGGTTTCTGGAATAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTGGCTTCTGCTCACCAACAGTCAAGAAGACATCGCAAGTATTTTCAGTCTAGGGCACGCTGCTCATaGTATGGTAGGTGGCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALASAHQQSRRHRKYFQSRARCS*YGRWRR Trigger: CCGACGCCACCTACCATACCATGAGCAGCGTGCCCT...AGACTGAAAATACTTGCGATGTCTTCTTGACTGTTGGTGAGCAGAAGCCAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR CCA 90 bp | GAACTCCCAACACCTTGCACACTGTCCCTGAACTTAACCCATGCTACTTATTTATCCTCCAGCCAGGCCTaGAGGACCGGCTTGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ELPTPCTLSLNLTHATYLSSSQA*RTGLRA Trigger: CGCTCTCAAGCCGGTCCTCCAGGCCTGGCTGGAGGA...TAAATAAGTAGCATGGGTTAAGTTCAGGGACAGTGTGCAAGGTGTTGGGAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTCTGCTCACCAACAGTCAAGAAGACATCGCAAGTATTTTCAGTCTGGGAGGTGGCGTCGGGCTTaGACGGATGATTCTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LASAHQQSRRHRKYFQSGRWRRA*TDDSCR Trigger: ACGGCAAGAATCATCCGTTCAAGCCCGACGCCACCT...CCCAGACTGAAAATACTTGCGATGTCTTCTTGACTGTTGGTGAGCAGAAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR GCA 90 bp | GCGCTGGCTTCTGCTCACCAACAGTCAAGAAGACATCGCAAGTATTTTCAGTCTCGATGGACGTGCGTTTaGGCTTACGCTCACTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ALASAHQQSRRHRKYFQSRWTCV*AYAHCR Trigger: ACGGCAGTGAGCGTAAGCGCAAACGCACGTCCATCG...AGACTGAAAATACTTGCGATGTCTTCTTGACTGTTGGTGAGCAGAAGCCAGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR GCA 90 bp | GAACTCCCAACACCTTGCACACTGTCCCTGAACTTAACCCATGCTACTTATTTAGCGCGGCGATGGACGTaGGTTTGCGCTTACGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELPTPCTLSLNLTHATYLARRWT*VCAYAH Trigger: GTGAGCGTAAGCGCAAACGCACGTCCATCGCCGCGC...TAAATAAGTAGCATGGGTTAAGTTCAGGGACAGTGTGCAAGGTGTTGGGAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR TCA 90 bp | GCTCAAAAGTATATGGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAATCGGGCTTGAACGGATaGTTCTTGCCGTGGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: AQKYMGTSTRDTHSGTGKSGLNG*FLPWET Trigger: CGTCTCCCACGGCAAGAATCATCCGTTCAAGCCCGA...TTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR TCA 90 bp | ATTCAGGCGCAGAAGGGAATTATTATAAGGCTATCCTTTGGAAACATATGTGTCGTGAGTGCAGCCGGGTaGGAGATGGGCACCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQAQKGIIIRLSFGNICVVSAAG*EMGTVG Trigger: GCCCACGGTGCCCATCTCTCACCCGGCTGCACTCAC...GACACATATGTTTCCAAAGGATAGCCTTATAATAATTCCCTTCTGCGCCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR TCA 90 bp | TATATGGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAACGCAGAGTTTACGCTCACTGCCGTTaGAGAGCTCTGGCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YMGTSTRDTHSGTGKRRVYAHCR*RALACC Trigger: ACAGCAAGCCAGAGCTCTTCAACGGCAGTGAGCGTA...AACTCTGCGTTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGATATTACCCTGCAGCTaGGGGGCTGGGAGACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RKRVQFCGPALAAAQKYMILPCS*GAGRQT Trigger: AGTTTGTCTCCCAGCCCCGCAGCTGCAGGGTAATAT...CATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS-3UTR GCA 90 bp | TGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAGAGACACCCAAATATATTACCCTaGAGCTGCGGGGCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSCSCRCSKVYGNFHKRHPNILP*SCGAGR Trigger: TCTCCCAGCCCCGCAGCTGCAGGGTAATATATTTGG...GTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGTATATGGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAACGCACAGAGCTTCGGCGCGTaGCAGCAGGCTCTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSIWELPQETHIAGQGNAQSFGA*QQALIK Trigger: TTTGATGAGAGCCTGCTGGCACGCGCCGAAGCTCTG...TGCGTTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS-3UTR GCA 90 bp | AAAAGTATATGGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAACGCAAGCGTGGGCGAGATGTaGTCAAGTAAGTCGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSIWELPQETHIAGQGNASVGEM*SSKSPS Trigger: CGAGGGCGACTTACTTGAGCACATCTCGCCCACGCT...TGCGTTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR GCA 90 bp | GCGCTGGCTTCTGCTCACCAACAGTCAAGAAGACATCGCAAGTATTTTCAGTCTCATGCGGGTGACTCATaGCCATGGCCTGATGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALASAHQQSRRHRKYFQSHAGDS*PWPDAS Trigger: ACTTGCATCAGGCCATGGGCATGAGTCACCCGCATG...AGACTGAAAATACTTGCGATGTCTTCTTGACTGTTGGTGAGCAGAAGCCAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CCA 90 bp | TGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAGAGACACAAGGACGTGGCTGGATaGCGAAATAGGCTTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WSCSCRCSKVYGNFHKRHKDVAG*RNRLRV Trigger: CACTCGAAGCCTATTTCGCCATCCAGCCACGTCCTT...GTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR GCA 90 bp | GCTCAAAAGTATATGGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAAAAGTGCAGGGCACGCTaGTCATGGTATGGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQKYMGTSTRDTHSGTGKKCRAR*SWYGRW Trigger: CCACCTACCATACCATGAGCAGCGTGCCCTGCACTT...TTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS-3UTR GCA 90 bp | GCTCAAAAGTATATGGGAACTTCCACAAGAGACACACATAGCGGGACAGGGAAACATGCGGGTGACTCATaGCCATGGCCTGATGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AQKYMGTSTRDTHSGTGKHAGDS*PWPDAS Trigger: ACTTGCATCAGGCCATGGGCATGAGTCACCCGCATG...TTTCCCTGTCCCGCTATGTGTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CCA 90 bp | GAACTCCCAACACCTTGCACACTGTCCCTGAACTTAACCCATGCTACTTATTTAGGTGACTCATGCCCATaGCCTGATGCAAGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELPTPCTLSLNLTHATYLGDSCP*PDASGP Trigger: TGGGCCACTTGCATCAGGCCATGGGCATGAGTCACC...TAAATAAGTAGCATGGGTTAAGTTCAGGGACAGTGTGCAAGGTGTTGGGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CCA 90 bp | AGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAAAGGACGTGGCTGGATaGCGAAATAGGCTTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVLLLPLLKSIWELPQKDVAG*RNRLRV Trigger: CACTCGAAGCCTATTTCGCCATCCAGCCACGTCCTT...TTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR CAA 72 bp | CCTACTAACCCCCAACAACCCAGAACTCCCAACACCTaGCACACTGTCCCTGAACTTAACCCATGCTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PTNPQQPRTPNT*HTVPELNPCYL Trigger: TAAGTAGCATGGGTTAAGTTCAGGGACAGTGTGCAAGGTGTTGGGAGTTCTGGGTTGTTGGGGGTTAGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| 3UTR CAA 72 bp | CACAGAGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTaGCCGCTGCTCAAAAGTATATGGGAACTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HRGKGSSSVVLL*PLLKSIWELPQ Trigger: TTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTGGCTTCTGCTCACCAACAGTCAAGAAGACATCGCAAGTATTTTCAGTCTAGCCGGAGTGTAGGCTaGAGAATTTGGGTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALASAHQQSRRHRKYFQSSRSVG*RIWVLA Trigger: TGCAAGAACCCAAATTCTCCAGCCTACACTCCGGCT...AGACTGAAAATACTTGCGATGTCTTCTTGACTGTTGGTGAGCAGAAGCCAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR GCA 90 bp | ATTCAGGCGCAGAAGGGAATTATTATAAGGCTATCCTTTGGAAACATATGTGTCGCAGTACGGGGTGCATaGCGAAAGGCTGCTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IQAQKGIIIRLSFGNICVAVRGA*RKAAWR Trigger: ACGCCAAGCAGCCTTTCGGCATGCACCCCGTACTGC...GACACATATGTTTCCAAAGGATAGCCTTATAATAATTCCCTTCTGCGCCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR TCA 90 bp | TATCTATTCCAGAAACCAAAGGTCACACGGCAACACACAAACTACATGAAGCAATACGCTCACTGCCGTTaGAGAGCTCTGGCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YLFQKPKVTRQHTNYMKQYAHCR*RALACC Trigger: ACAGCAAGCCAGAGCTCTTCAACGGCAGTGAGCGTA...TTGCTTCATGTAGTTTGTGTGTTGCCGTGTGACCTTTGGTTTCTGGAATAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS GCA 90 bp | GCCCTCGAGGCCCTGATGTACCGCGTGATGCGGGTGCGAGGTGAGTaGAGCCGGGTGAGAGATGGGCACCGTGGGCGAGGTAGAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALEALMYRVMRVRGE*SRVRDGHRGRGRSA Trigger: TGCACTTCTACCTCGCCCACGGTGCCCATCTCTCACCCGGCTGCACTCACCTCGCACCCGCATCACGCGGTACATCAGGGCCTCGAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS TCA 90 bp | GCTCGGCGAACGCTTCCAGCTCTCGAGGGTCTGACTCCACATCGCTaGGACACGCGGGCATGGCACTGTGCGGTGCTACGGCATGCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ARRTLPALEGLTPHR*DTRAWHCAVLRHAG Trigger: ACCCGCATGCCGTAGCACCGCACAGTGCCATGCCCGCGTGTCTCAGCGATGTGGAGTCAGACCCTCGAGAGCTGGAAGCGTTCGCCGAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS GCA 90 bp | ACGCGGGCATGGCACTGTGCGGTGCTACGGCATGCGGGTGACTCATaGCCATGGCCTGATGCAAGTGGCCCATGGCGCCTAGATGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: TRAWHCAVLRHAGDS*PWPDASGPWRLDDA Trigger: CGCATCATCTAGGCGCCATGGGCCACTTGCATCAGGCCATGGGCATGAGTCACCCGCATGCCGTAGCACCGCACAGTGCCATGCCCGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS CCA 90 bp | GCATCACCGAGTGCTCCGGGGCCCCTAGGCCACTCACGCTCAGCGTaGGCGAGATGTGCTCAAGTAAGTCGCCCTCGAGGCCCTGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASPSAPGPLGHSRSA*ARCAQVSRPRGPDV Trigger: TACATCAGGGCCTCGAGGGCGACTTACTTGAGCACATCTCGCCCACGCTGAGCGTGAGTGGCCTAGGGGCCCCGGAGCACTCGGTGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS CCA 90 bp | CGGCATGCGGGTGACTCATGCCCATGGCCTGATGCAAGTGGCCCATaGCGCCTAGATGATGCGGGTGGATCTGCGCCGGCATCACCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RHAGDSCPWPDASGP*RLDDAGGSAPASPS Trigger: ACTCGGTGATGCCGGCGCAGATCCACCCGCATCATCTAGGCGCCATGGGCCACTTGCATCAGGCCATGGGCATGAGTCACCCGCATGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS CCA 90 bp | GCATGGCACTGTGCGGTGCTACGGCATGCGGGTGACTCATGCCCATaGCCTGATGCAAGTGGCCCATGGCGCCTAGATGATGCGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AWHCAVLRHAGDSCP*PDASGPWRLDDAGG Trigger: TCCACCCGCATCATCTAGGCGCCATGGGCCACTTGCATCAGGCCATGGGCATGAGTCACCCGCATGCCGTAGCACCGCACAGTGCCATGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS TCA 90 bp | AAGTGCAGGGCACGCTGCTCATGGTATGGTAGGTGGCGTCGGGCTTaGACGGATGATTCTTGCCGTGGGAGACGATATCCACCGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KCRARCSWYGRWRRA*TDDSCRGRRYPPPP Trigger: TGGCGGCGGTGGATATCGTCTCCCACGGCAAGAATCATCCGTTCAAGCCCGACGCCACCTACCATACCATGAGCAGCGTGCCCTGCACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR CAA 90 bp | AACGTCCCCTCCCATCGGAAGGGGGCGATGCCATTAGGCTCTCCAGGCTCCTCCTGTAGGCTGGAGAATTaGGGTTCTTGCAGTACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NVPSHRKGAMPLGSPGSSCRLEN*GSCSTG Trigger: CCCCGTACTGCAAGAACCCAAATTCTCCAGCCTACA...GGAGGAGCCTGGAGAGCCTAATGGCATCGCCCCCTTCCGATGGGAGGGGACGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGGCCTGAGGTCCTGCTGTCTCAAGAGCAAGACCGAGTTTCAGCACCACCCGGGGATCTTAAGATaGGCTAAAGCCGCGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: AAGLRSCCLKSKTEFQHHPGILR*AKAAPT Trigger: CGTGGGCGCGGCTTTAGCCAATCTTAAGATCCCCGG...GTGGTGCTGAAACTCGGTCTTGCTCTTGAGACAGCAGGACCTCAGGCCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
||
| CDS CCA 90 bp | AAACTCGGCGCATGGCCTCAGAGCCGGAGTGTAGGCTGGAGAATTTaGGTTCTTGCAGTACGGGGTGCATGCCGAAAGGCTGCTTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: KLGAWPQSRSVGWRI*VLAVRGACRKAAWR Trigger: ACGCCAAGCAGCCTTTCGGCATGCACCCCGTACTGCAAGAACCCAAATTCTCCAGCCTACACTCCGGCTCTGAGGCCATGCGCCGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS CCA 90 bp | CTGGGAGACAAACTCGGCGCATGGCCTCAGAGCCGGAGTGTAGGCTaGAGAATTTGGGTTCTTGCAGTACGGGGTGCATGCCGAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LGDKLGAWPQSRSVG*RIWVLAVRGACRKA Trigger: AGCCTTTCGGCATGCACCCCGTACTGCAAGAACCCAAATTCTCCAGCCTACACTCCGGCTCTGAGGCCATGCGCCGAGTTTGTCTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS-3UTR CAA 90 bp | GGGAAAGAACCTGACCTGCCAGGAAACACCCTGGAGTGTCCCGTAACGTCCCCTTTACGCTCACTGCCGTaGAAGAGCTCTGGCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GKEPDLPGNTLECPVTSPLRSLP*KSSGLL Trigger: CAGCAAGCCAGAGCTCTTCAACGGCAGTGAGCGTAA...AGGGGACGTTACGGGACACTCCAGGGTGTTTCCTGGCAGGTCAGGTTCTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CAA 90 bp | TGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGGGAACTTCCACAAGAGACACGCGATGGACGTGCGTTaGCGCTTACGCTCACTGCCG | + |
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Preference number: 5 (lower is better) Translates to: WSCSCRCSKVYGNFHKRHAMDVR*RLRSLP Trigger: CGGCAGTGAGCGTAAGCGCAAACGCACGTCCATCGC...GTGTCTCTTGTGGAAGTTCCCATATACTTTTGAGCAGCGGCAAGAGCAGGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CAA 90 bp | AGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGCCGGGGATCTTAAGATaGGCTAAAGCCGCGCCCACG | + |
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Preference number: 5 (lower is better) Translates to: RKRVQFCGPALAAAQKYMPGILR*AKAAPT Trigger: CGTGGGCGCGGCTTTAGCCAATCTTAAGATCCCCGG...CATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CAA 90 bp | AGGAAAAGGGTCCAGTTCTGTGGTCCTGCTCTTGCCGCTGCTCAAAAGTATATGTTACGCTCACTGCCGTaGAAGAGCTCTGGCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RKRVQFCGPALAAAQKYMLRSLP*KSSGLL Trigger: CAGCAAGCCAGAGCTCTTCAACGGCAGTGAGCGTAA...CATATACTTTTGAGCAGCGGCAAGAGCAGGACCACAGAACTGGACCCTTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CAA 90 bp | GAACTCCCAACACCTTGCACACTGTCCCTGAACTTAACCCATGCTACTTATTTATGGGTGACCCCCAACTaGATGCGCCTCTGCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: ELPTPCTLSLNLTHATYLWVTPN*MRLCLK Trigger: CTTCAAGCAGAGGCGCATCAAGTTGGGGGTCACCCA...TAAATAAGTAGCATGGGTTAAGTTCAGGGACAGTGTGCAAGGTGTTGGGAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CAA 90 bp | ATTCAGGCGCAGAAGGGAATTATTATAAGGCTATCCTTTGGAAACATATGTGTCTGGGTGACCCCCAACTaGATGCGCCTCTGCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IQAQKGIIIRLSFGNICVWVTPN*MRLCLK Trigger: CTTCAAGCAGAGGCGCATCAAGTTGGGGGTCACCCA...GACACATATGTTTCCAAAGGATAGCCTTATAATAATTCCCTTCTGCGCCTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS-3UTR CAA 90 bp | GAACTCCCAACACCTTGCACACTGTCCCTGAACTTAACCCATGCTACTTATTTATTGAGAGCGATCATGTaGTTGTGCGACAGAGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: ELPTPCTLSLNLTHATYLLRAIM*LCDRVR Trigger: TCTTACTCTGTCGCACAACAACATGATCGCTCTCAA...TAAATAAGTAGCATGGGTTAAGTTCAGGGACAGTGTGCAAGGTGTTGGGAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS GCA 72 bp | GCCCTGATGTACCGCGTGATGCGGGTGCGAGGTGAGTaGAGCCGGGTGAGAGATGGGCACCGTGGGCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: ALMYRVMRVRGE*SRVRDGHRGRG Trigger: ACCTCGCCCACGGTGCCCATCTCTCACCCGGCTGCACTCACCTCGCACCCGCATCACGCGGTACATCAGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS CCA 72 bp | AGTGCTCCGGGGCCCCTAGGCCACTCACGCTCAGCGTaGGCGAGATGTGCTCAAGTAAGTCGCCCTCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SAPGPLGHSRSA*ARCAQVSRPRG Trigger: GCCTCGAGGGCGACTTACTTGAGCACATCTCGCCCACGCTGAGCGTGAGTGGCCTAGGGGCCCCGGAGCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS GCA 72 bp | CACATCGCTGAGACACGCGGGCATGGCACTGTGCGGTaGTACGGCATGCGGGTGACTCATGCCCATGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HIAETRGHGTVR*YGMRVTHAHGL Trigger: CAGGCCATGGGCATGAGTCACCCGCATGCCGTAGCACCGCACAGTGCCATGCCCGCGTGTCTCAGCGATGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS TCA 72 bp | ACGCTTCCAGCTCTCGAGGGTCTGACTCCACATCGCTaGGACACGCGGGCATGGCACTGTGCGGTGCTACGG | + |
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Preference number: 6 (lower is better) Translates to: TLPALEGLTPHR*DTRAWHCAVLR Trigger: CCGTAGCACCGCACAGTGCCATGCCCGCGTGTCTCAGCGATGTGGAGTCAGACCCTCGAGAGCTGGAAGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS GCA 72 bp | TGGCACTGTGCGGTGCTACGGCATGCGGGTGACTCATaGCCATGGCCTGATGCAAGTGGCCCATGGCGCCTA | + |
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Preference number: 6 (lower is better) Translates to: WHCAVLRHAGDS*PWPDASGPWRL Trigger: TAGGCGCCATGGGCCACTTGCATCAGGCCATGGGCATGAGTCACCCGCATGCCGTAGCACCGCACAGTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS CCA 72 bp | GGTGACTCATGCCCATGGCCTGATGCAAGTGGCCCATaGCGCCTAGATGATGCGGGTGGATCTGCGCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: GDSCPWPDASGP*RLDDAGGSAPA Trigger: TGCCGGCGCAGATCCACCCGCATCATCTAGGCGCCATGGGCCACTTGCATCAGGCCATGGGCATGAGTCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS CCA 72 bp | TGTGCGGTGCTACGGCATGCGGGTGACTCATGCCCATaGCCTGATGCAAGTGGCCCATGGCGCCTAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: CAVLRHAGDSCP*PDASGPWRLDD Trigger: ATCATCTAGGCGCCATGGGCCACTTGCATCAGGCCATGGGCATGAGTCACCCGCATGCCGTAGCACCGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025374.4 ENSMUST00000237247.2 |
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| CDS CAA 90 bp | CAAACTCGGCGCATGGCCTCAGAGCCGGAGTGTAGGCTGGAGAATTaGGGTTCTTGCAGTACGGGGTGCATGCCGAAAGGCTGCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: QTRRMASEPECRLEN*GSCSTGCMPKGCLA Trigger: CGCCAAGCAGCCTTTCGGCATGCACCCCGTACTGCAAGAACCCAAATTCTCCAGCCTACACTCCGGCTCTGAGGCCATGCGCCGAGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS CAA 72 bp | CGCATGGCCTCAGAGCCGGAGTGTAGGCTGGAGAATTaGGGTTCTTGCAGTACGGGGTGCATGCCGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: RMASEPECRLEN*GSCSTGCMPKG Trigger: GCCTTTCGGCATGCACCCCGTACTGCAAGAACCCAAATTCTCCAGCCTACACTCCGGCTCTGAGGCCATGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS CCA 72 bp | AAACTCGGCGCATGGCCTCAGAGCCGGAGTGTAGGCTaGAGAATTTGGGTTCTTGCAGTACGGGGTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: KLGAWPQSRSVG*RIWVLAVRGAC Trigger: GCATGCACCCCGTACTGCAAGAACCCAAATTCTCCAGCCTACACTCCGGCTCTGAGGCCATGCGCCGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS TCA 72 bp | GCACGCTGCTCATGGTATGGTAGGTGGCGTCGGGCTTaGACGGATGATTCTTGCCGTGGGAGACGATATCCA | + |
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Preference number: 6 (lower is better) Translates to: ARCSWYGRWRRA*TDDSCRGRRYP Trigger: TGGATATCGTCTCCCACGGCAAGAATCATCCGTTCAAGCCCGACGCCACCTACCATACCATGAGCAGCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS GCA 72 bp | TGTAGGCTGGAGAATTTGGGTTCTTGCAGTACGGGGTaGATGCCGAAAGGCTGCTTGGCGTTCATGGCCATC | + |
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Preference number: 6 (lower is better) Translates to: CRLENLGSCSTG*MPKGCLAFMAI Trigger: GATGGCCATGAACGCCAAGCAGCCTTTCGGCATGCACCCCGTACTGCAAGAACCCAAATTCTCCAGCCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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| CDS GCA 72 bp | GGAGACGATATCCACCGCCGCCAGAGCTTCGGCGCGTaGCAGCAGGCTCTCATCAAAGCTTCCAAATATATT | + |
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Preference number: 6 (lower is better) Translates to: GDDIHRRQSFGA*QQALIKASKYI Trigger: AATATATTTGGAAGCTTTGATGAGAGCCTGCTGGCACGCGCCGAAGCTCTGGCGGCGGTGGATATCGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025374.4 |
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