Pregenerated sensors for POU4F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031688Ensembl transcript IDs: ENSMUST00000034115.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGCGAAACCGGTTCACAATCTCTCTGATTTGGGCTCAGCTGCTTaGTTCTTTGCTCCTGGCTTGGTCTGGGTTCACATTTACCGGAAT | + |
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Preference number: 1 (lower is better) Translates to: TAKPVHNLSDLGSAA*FFAPGLVWVHIYRN Trigger: ATTCCGGTAAATGTGAACCCAGACCAAGCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAATCAGAGAGATTGTGAACCGGTTTCGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CCA 90 bp | TTTGGTTTTTCTTCACTGCGAAACCGGTTCACAATCTCTCTGATTTaGGCTCAGCTGCTTGCTTCTTTGCTCCTGGCTTGGTCTGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: FGFSSLRNRFTISLI*AQLLASLLLAWSGF Trigger: GAACCCAGACCAAGCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAATCAGAGAGATTGTGAACCGGTTTCGCAGTGAAGAAAAACCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR GCA 90 bp | CTAAGGCTGGGAAAGTATACACTGCTCATCGTTGGTACCTCCAGCTaGTTCTTCTCTTCTGTTAGAGATGTGTATGTGTGTTTGTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: LRLGKYTLLIVGTSS*FFSSVRDVYVCLCV Trigger: TACACACAAACACACATACACATCTCTAACAGAAGAGAAGAAGCAGCTGGAGGTACCAACGATGAGCAGTGTATACTTTCCCAGCCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CCA 90 bp | AAATACCTTGGTGAAATCTTAGAATCCAGCAGAGTAAGCACCAAGTaGAGACTGCACCTAAGGCTGGGAAAGTATACACTGCTCATCGTT | + |
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Preference number: 1 (lower is better) Translates to: KYLGEILESSRVSTK*RLHLRLGKYTLLIV Trigger: AACGATGAGCAGTGTATACTTTCCCAGCCTTAGGTGCAGTCTCCACTTGGTGCTTACTCTGCTGGATTCTAAGATTTCACCAAGGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR TCA 90 bp | TGTAGCAACAAAGCAATCGAAAACTGGGAGATGGAAATACCTTGGTaGAATCTTAGAATCCAGCAGAGTAAGCACCAAGTGGAGACTGCA | + |
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Preference number: 1 (lower is better) Translates to: CSNKAIENWEMEIPW*NLRIQQSKHQVETA Trigger: TGCAGTCTCCACTTGGTGCTTACTCTGCTGGATTCTAAGATTTCACCAAGGTATTTCCATCTCCCAGTTTTCGATTGCTTTGTTGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CCA 90 bp | GAAACGAGGTCATATACAGAACTCAGAACTTTGGAGAGCCTCAAATaGATCAGCAATTACAGCAAATTCTGTAAGAATATATTCATATGT | + |
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Preference number: 1 (lower is better) Translates to: ETRSYTELRTLESLK*ISNYSKFCKNIFIC Trigger: ACATATGAATATATTCTTACAGAATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATATGACCTCGTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CCA 90 bp | ATTAACAAAAACAAGAAACGAGGTCATATACAGAACTCAGAACTTTaGAGAGCCTCAAATGGATCAGCAATTACAGCAAATTCTGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: INKNKKRGHIQNSEL*RASNGSAITANSVR Trigger: TCTTACAGAATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATATGACCTCGTTTCTTGTTTTTGTTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CAA 90 bp | CTCATTCTTGCAGGGTTTTCAAAAGCTTGTCCCTCTACCTTCCTGTaGACAGTCAGCTCCTCGCTTTCTCTGATGAAGCCGAGCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LILAGFSKACPSTFL*TVSSSLSLMKPSSP Trigger: TGGGCTGCTCGGCTTCATCAGAGAAAGCGAGGAGCTGACTGTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGCAAGAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CAA 90 bp | TTTTGGTTTTTCTTCACTGCGAAACCGGTTCACAATCTCTCTGATTaGGGCTCAGCTGCTTGCTTCTTTGCTCCTGGCTTGGTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: FWFFFTAKPVHNLSD*GSAACFFAPGLVWV Trigger: AACCCAGACCAAGCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAATCAGAGAGATTGTGAACCGGTTTCGCAGTGAAGAAAAACCAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGCTCCAAAAGGATTCTACCAAACACTGTGAATTTACAAGCAGTGCACCTCTACCTTCCTGTTaGCAGTCAGCTCCTCGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VCVLQKDSTKHCEFTSSAPLPSC*QSAPRF Trigger: AAAGCGAGGAGCTGACTGTCAACAGGAAGGTAGAGG...TGCACTGCTTGTAAATTCACAGTGTTTGGTAGAATCCTTTTGGAGCACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATTCTACCAGCTGCTTGCTTCTTTaGTCCTGGCTTGGTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: KVPVTLYLFVCVLQKDSTSCLLL*SWLGLG Trigger: ACCCAGACCAAGCCAGGAGCAAAGAAGCAAGCAGCT...GGTAGAATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CAA 90 bp | AATCTCTCTGATTTGGGCTCAGCTGCTTGCTTCTTTGCTCCTGGCTaGGTCTGGGTTCACATTTACCGGAATTGTTTTCTGATAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: NLSDLGSAACFFAPG*VWVHIYRNCFLIAK Trigger: TTTGGCTATCAGAAAACAATTCCGGTAAATGTGAACCCAGACCAAGCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAATCAGAGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGCTCCAAAAGGATTCTACCAAACACTGTGAATTTACAAGCAGTGCAGGTTCACAATCTCTCTaGTTTGGGCTCAGCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: VCVLQKDSTKHCEFTSSAGSQSL*FGLSCL Trigger: CAAGCAGCTGAGCCCAAATCAGAGAGATTGTGAACC...TGCACTGCTTGTAAATTCACAGTGTTTGGTAGAATCCTTTTGGAGCACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTGCTCCTGGCTTGGTCTaGGTTCACATTTACCGGAAT | + |
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Preference number: 2 (lower is better) Translates to: TALLQLDKFLFVLCCLWFAPGLV*VHIYRN Trigger: ATTCCGGTAAATGTGAACCCAGACCAAGCCAGGAGC...AAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR GCA 90 bp | TATAAAGGTCAAAATGTAGCAACAAAGCAATCGAAAACTGGGAGATGGAAATACTTGGGCTCAGCTGCTTaGTTCTTTGCTCCTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: YKGQNVATKQSKTGRWKYLGSAA*FFAPGL Trigger: CAAGCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAA...GTATTTCCATCTCCCAGTTTTCGATTGCTTTGTTGCTACATTTTGACCTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR TCA 90 bp | ATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATAGCTCTGCTACAACTTaGCAAATTCCTTTTCGTGTT | + |
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Preference number: 2 (lower is better) Translates to: IQNSELWRASNGSAITANSSATT*QIPFRV Trigger: AACACGAAAAGGAATTTGTCAAGTTGTAGCAGAGCT...ATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR GCA 90 bp | ATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATTTGGTTTTTCTTCACTaGGAAACCGGTTCACAATCT | + |
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Preference number: 2 (lower is better) Translates to: IQNSELWRASNGSAITANLVFLH*ETGSQS Trigger: AGATTGTGAACCGGTTTCGCAGTGAAGAAAAACCAA...ATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR GCA 90 bp | TATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATTACTTGCTCATTCTTaGAGGGTTTTCAAAAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: YTELRTLESLKWISNYSKLLAHS*RVFKSL Trigger: CAAGCTTTTGAAAACCCTGCAAGAATGAGCAAGTAA...TTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CCA 72 bp | TCTTCACTGCGAAACCGGTTCACAATCTCTCTGATTTaGGCTCAGCTGCTTGCTTCTTTGCTCCTGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SSLRNRFTISLI*AQLLASLLLAW Trigger: CCAAGCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAATCAGAGAGATTGTGAACCGGTTTCGCAGTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR TCA 72 bp | GTTTTTCTTCACTGCGAAACCGGTTCACAATCTCTCTaGTTTGGGCTCAGCTGCTTGCTTCTTTGCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VFLHCETGSQSL*FGLSCLLLCSW Trigger: CCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAATCAGAGAGATTGTGAACCGGTTTCGCAGTGAAGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CCA 72 bp | GGTGAAATCTTAGAATCCAGCAGAGTAAGCACCAAGTaGAGACTGCACCTAAGGCTGGGAAAGTATACACTG | + |
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Preference number: 3 (lower is better) Translates to: GEILESSRVSTK*RLHLRLGKYTL Trigger: CAGTGTATACTTTCCCAGCCTTAGGTGCAGTCTCCACTTGGTGCTTACTCTGCTGGATTCTAAGATTTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR CAA 90 bp | ATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATCCCTCTACCTTCCTGTaGACAGTCAGCTCCTCGCTT | + |
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Preference number: 3 (lower is better) Translates to: IQNSELWRASNGSAITANPSTFL*TVSSSL Trigger: AAGCGAGGAGCTGACTGTCAACAGGAAGGTAGAGGG...ATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR CAA 90 bp | TATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATTTGGGCTCAGCTGCTaGCTTCTTTGCTCCTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: YTELRTLESLKWISNYSKFGLSC*LLCSWL Trigger: AAGCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAA...TTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR GCA 72 bp | GGAAAGTATACACTGCTCATCGTTGGTACCTCCAGCTaGTTCTTCTCTTCTGTTAGAGATGTGTATGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GKYTLLIVGTSS*FFSSVRDVYVC Trigger: ACACACATACACATCTCTAACAGAAGAGAAGAAGCAGCTGGAGGTACCAACGATGAGCAGTGTATACTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR CAA 90 bp | ATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATCACAATCTCTCTGATTaGGGCTCAGCTGCTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: IQNSELWRASNGSAITANHNLSD*GSAACF Trigger: GAAGCAAGCAGCTGAGCCCAAATCAGAGAGATTGTG...ATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR CAA 90 bp | CTTGCTCATTCTTGCAGGGTTTTCAAAAGCTTGTCCCTCTACCTTCCTGTTGACTTCGTGTTGTGTTGTTaGTGGTTTTGGTTTTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LAHSCRVFKSLSLYLPVDFVLCC*WFWFFF Trigger: GAAGAAAAACCAAAACCACAAACAACACAACACGAA...GTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGCAAGAATGAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR TCA 72 bp | AAAGCAATCGAAAACTGGGAGATGGAAATACCTTGGTaGAATCTTAGAATCCAGCAGAGTAAGCACCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: KAIENWEMEIPW*NLRIQQSKHQV Trigger: CACTTGGTGCTTACTCTGCTGGATTCTAAGATTTCACCAAGGTATTTCCATCTCCCAGTTTTCGATTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR CAA 90 bp | ATAGATAAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATCAGCTCTGCTACAACTaGACAAATTCCTTTTCGTGT | + |
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Preference number: 3 (lower is better) Translates to: IDKVPVTLYLFVCVLQKDQLCYN*TNSFSC Trigger: ACACGAAAAGGAATTTGTCAAGTTGTAGCAGAGCTG...ATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTTATCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR-3UTR CAA 90 bp | TATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAACCTTTTCGTGTTGTGTaGTTTGTGGTTTTGGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: YTELRTLESLKWISNYSKPFRVV*FVVLVF Trigger: AAAAACCAAAACCACAAACAACACAACACGAAAAGG...TTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR GCA 72 bp | ATAAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTaGTCCAAAAGGATTCTACCAAACACTGTGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: IRYQSLCTYLCV*SKRILPNTVNL Trigger: TAAATTCACAGTGTTTGGTAGAATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR TCA 90 bp | AGCACCAAGTGGAGACTGCACCTAAGGCTGGGAAAGTATACACTGCTCATCGTTGCCATGTGTGGTGCGTaGGCCGGAGTGGACACCACC | + |
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Preference number: 4 (lower is better) Translates to: STKWRLHLRLGKYTLLIVAMCGA*AGVDTT Trigger: GGTGGTGTCCACTCCGGCTCACGCACCACACATGGC...AACGATGAGCAGTGTATACTTTCCCAGCCTTAGGTGCAGTCTCCACTTGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | CGAGGTCATATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTTGCTGCTGGAACTGCTaGTCCGGCCGCCGCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RGHIQNSELWRASNGSAICCWNC*SGRRRL Trigger: GAGGCGGCGGCGGCCGGAGCAGCAGTTCCAGCAGCA...AATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATATGACCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | AGCACCAAGTGGAGACTGCACCTAAGGCTGGGAAAGTATACACTGCTCATCGTTCGATGGACGTGCGCTTaGGCTTCTTCTCCGCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: STKWRLHLRLGKYTLLIVRWTCA*ASSPRH Trigger: ATGGCGCGGAGAAGAAGCGCAAGCGCACGTCCATCG...AACGATGAGCAGTGTATACTTTCCCAGCCTTAGGTGCAGTCTCCACTTGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR TCA 90 bp | CGAGGTCATATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTTGCAGGCTGCCTGCGTaGGGCATGCTGAACGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGHIQNSELWRASNGSAICRLPA*GMLNAC Trigger: GCAGGCGTTCAGCATGCCTCACGCAGGCAGCCTGCA...AATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATATGACCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | CTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTTGGTCGCCGCTGCCGCCGCTaGCACTGCTGCTGGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: LCYNLTNSFSCCVVCGFGRRCRR*HCCWNC Trigger: GCAGTTCCAGCAGCAGTGGCAGCGGCGGCAGCGGCG...ACCAAAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | CTTGCTCATTCTTGCAGGGTTTTCAAAAGCTTGTCCCTCTACCTTCCTGTTGACCATGTGCGTGGGCCATaGTCAGGGCTGCTTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LAHSCRVFKSLSLYLPVDHVRGP*SGLLGA Trigger: TGCACCAAGCAGCCCTGAGCATGGCCCACGCACATG...GTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGCAAGAATGAGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGCTCCAAAAGGATTCTACCAAACACTGTGAATTTACAAGCAGTGCAGGCTTGAAGGGGCTGTaGTGGGGCGGATGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VCVLQKDSTKHCEFTSSAGLKGL*WGGWWW Trigger: CCACCACCATCCGCCCCACCACAGCCCCTTCAAGCC...TGCACTGCTTGTAAATTCACAGTGTTTGGTAGAATCCTTTTGGAGCACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CCA 90 bp | CTTGCTCATTCTTGCAGGGTTTTCAAAAGCTTGTCCCTCTACCTTCCTGTTGACCATGGTGGCCATGTGTaGTGCGTGAGCCGGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LAHSCRVFKSLSLYLPVDHGGHV*CVSRSG Trigger: TCCACTCCGGCTCACGCACCACACATGGCCACCATG...GTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGCAAGAATGAGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR TCA 90 bp | ATAGATAAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATAAGTGGCGTCCGGCTTaGAGGGGCTGTGGTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: IDKVPVTLYLFVCVLQKDKWRPA*RGCGGA Trigger: CGCCCCACCACAGCCCCTTCAAGCCGGACGCCACTT...ATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTTATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | TATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAACGCCGCTGCCACTGCTaGTGGAACTGCTGCTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: YTELRTLESLKWISNYSKRRCHC*WNCCSG Trigger: GCCGGAGCAGCAGTTCCAGCAGCAGTGGCAGCGGCG...TTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGCTCCAAAAGGATTCTACCAAACACTGTGAATTTACAAGCAGTGCAGGTGGCCATGTGTGGTaGGTGAGCCGGAGTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: VCVLQKDSTKHCEFTSSAGGHVW*VSRSGH Trigger: GTGTCCACTCCGGCTCACGCACCACACATGGCCACC...TGCACTGCTTGTAAATTCACAGTGTTTGGTAGAATCCTTTTGGAGCACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CCA 90 bp | CTTGCTCATTCTTGCAGGGTTTTCAAAAGCTTGTCCCTCTACCTTCCTGTTGACTGGTGGCTCTTACTCTaGGAGACGATGTCCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: LAHSCRVFKSLSLYLPVDWWLLL*ETMSTA Trigger: CGCCGTGGACATCGTCTCCCAGAGTAAGAGCCACCA...GTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGCAAGAATGAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CCA 90 bp | ATAGATAAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATGTGCGTGAGCCGGAGTaGACACCACCGTGCCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: IDKVPVTLYLFVCVLQKDVREPE*TPPCRR Trigger: CCGACGGCACGGTGGTGTCCACTCCGGCTCACGCAC...ATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTTATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CAA 72 bp | GCAGGGTTTTCAAAAGCTTGTCCCTCTACCTTCCTGTaGACAGTCAGCTCCTCGCTTTCTCTGATGAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: AGFSKACPSTFL*TVSSSLSLMKP Trigger: CGGCTTCATCAGAGAAAGCGAGGAGCTGACTGTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | TATAAAGGTCAAAATGTAGCAACAAAGCAATCGAAAACTGGGAGATGGAAATACCACTGCTGCTGGAACTaGTGCTCCGGCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YKGQNVATKQSKTGRWKYHCCWN*CSGRRR Trigger: GCGGCGGCGGCCGGAGCAGCAGTTCCAGCAGCAGTG...GTATTTCCATCTCCCAGTTTTCGATTGCTTTGTTGCTACATTTTGACCTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | ACAGCTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTAGCCCGGGGCTTAGGTaGTCAAGCAGCTCGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TALLQLDKFLFVLCCLWFSPGLR*SSSSPS Trigger: GGAGGGCGAGCTGCTTGAGCACCTAAGCCCCGGGCT...AAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTGCTCCTGGCTTGGTCTGGGTTCACATTTACCGGAATTGTTTTCTGATACTCAGGGCTGCTTGGTaGATGGGGTTCATGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FFAPGLVWVHIYRNCFLILRAAW*MGFMVA Trigger: GGCCACCATGAACCCCATGCACCAAGCAGCCCTGAG...TATCAGAAAACAATTCCGGTAAATGTGAACCCAGACCAAGCCAGGAGCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR GCA 90 bp | TATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATCCTCCAGCCACGCCTaGAGGATGGGCTTGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: YTELRTLESLKWISNYSKSSSHA*RMGLSA Trigger: CGCGCTCAAGCCCATCCTGCAGGCGTGGCTGGAGGA...TTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CCA 90 bp | AAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATTCTACCCTGTGGTGGGGCGGATaGTGGTGGTGGCTCTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KVPVTLYLFVCVLQKDSTLWWGG*WWWLLL Trigger: GAGTAAGAGCCACCACCACCATCCGCCCCACCACAG...GGTAGAATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CCA 90 bp | CTTGCTCATTCTTGCAGGGTTTTCAAAAGCTTGTCCCTCTACCTTCCTGTTGACACGGGATGGTGTTCATaGTGTGGTAAGTGGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LAHSCRVFKSLSLYLPVDTGWCS*CGKWRP Trigger: CGGACGCCACTTACCACACCATGAACACCATCCCGT...GTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGCAAGAATGAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CCA 90 bp | ATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATGGCAGCCCATGTGCGTaGGCCATGCTCAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQNSELWRASNGSAITANGSPCA*AMLRAA Trigger: AGCAGCCCTGAGCATGGCCCACGCACATGGGCTGCC...ATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR GCA 90 bp | ATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATCACGTGCAGGCTGCCTaGGTGAGGCATGCTGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: IQNSELWRASNGSAITANHVQAA*VRHAER Trigger: GCGTTCAGCATGCCTCACGCAGGCAGCCTGCACGTG...ATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR GCA 90 bp | AAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATTCTACCAGAAGAAGAGGAGGCTaGCGACGTGCACGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVPVTLYLFVCVLQKDSTRRRGG*RRARDG Trigger: ACCATCCCGTGCACGTCGGCAGCCTCCTCTTCTTCT...GGTAGAATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR GCA 90 bp | ATAGATAAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATCAGGTCCCGCGGGTCTaGATCCACGTCGCTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDKVPVTLYLFVCVLQKDQVPRV*IHVAHA Trigger: TGCATGAGCGACGTGGATGCAGACCCGCGGGACCTG...ATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTTATCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| 3UTR CAA 72 bp | GATTTGGGCTCAGCTGCTTGCTTCTTTGCTCCTGGCTaGGTCTGGGTTCACATTTACCGGAATTGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLGSAACFFAPG*VWVHIYRNCFL Trigger: CAGAAAACAATTCCGGTAAATGTGAACCCAGACCAAGCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR GCA 90 bp | TATAAAGGTCAAAATGTAGCAACAAAGCAATCGAAAACTGGGAGATGGAAATACGGTGGTGGTGATGGGTaGCAGCCAGAGCGGACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YKGQNVATKQSKTGRWKYGGGDG*QPERTG Trigger: ACCCGTCCGCTCTGGCTGGCACCCATCACCACCACC...GTATTTCCATCTCCCAGTTTTCGATTGCTTTGTTGCTACATTTTGACCTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR GCA 90 bp | ATAGATAAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATCATCCACGTCGCTCATaGAGCCCATGTGCGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDKVPVTLYLFVCVLQKDHPRRS*SPCARA Trigger: TGCCCTCGCACATGGGCTGCATGAGCGACGTGGATG...ATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTTATCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGCTCCTGGCTTGGTCTGGGTTCACATTTACCGGAATTGTTTTCTGATAGTGAGCTTCTCGCGGTaGGATTTCTCAGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFAPGLVWVHIYRNCFLIVSFSR*DFSASS Trigger: GGAGGAAGCTGAGAAATCCCACCGCGAGAAGCTCAC...TATCAGAAAACAATTCCGGTAAATGTGAACCCAGACCAAGCCAGGAGCAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTTGGTCTGCGTGAGGCATGCTaGACGCCTGCTTGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCYNLTNSFSCCVVCGFGLREAC*TPACCS Trigger: TGAACAGCAAGCAGGCGTTCAGCATGCCTCACGCAG...ACCAAAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTTGGTGGCCATGCTCAGGGCTaGTTGGTGCATGGGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCYNLTNSFSCCVVCGFGGHAQG*LVHGVH Trigger: ATGAACCCCATGCACCAAGCAGCCCTGAGCATGGCC...ACCAAAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGTCAAAATGTAGCAACAAAGCAATCGAAAACTGGGAGATGGAAATACGTAGCGCCGAGTACTTaGGCTCCACGTGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YKGQNVATKQSKTGRWKYVAPST*APRAGC Trigger: GCAGCCTGCACGTGGAGCCCAAGTACTCGGCGCTAC...GTATTTCCATCTCCCAGTTTTCGATTGCTTTGTTGCTACATTTTGACCTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTTGGTGGTGCATGGGGTTCATaGTGGCCATGTGTGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LCYNLTNSFSCCVVCGFGGAWGS*WPCVVR Trigger: ACGCACCACACATGGCCACCATGAACCCCATGCACC...ACCAAAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTGGGCTGCTTGGTGCATaGGGTTCATGGTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TALLQLDKFLFVLCCLWFGLLGA*GSWWPC Trigger: ACATGGCCACCATGAACCCCATGCACCAAGCAGCCC...AAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CCA 90 bp | ATAGATAAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATAGGGCCTTGGCTGGATaGCGAAGTAGGCTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IDKVPVTLYLFVCVLQKDRALAG*RSRLPE Trigger: CTCTGGAAGCCTACTTCGCCATCCAGCCAAGGCCCT...ATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTTATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CCA 90 bp | TATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAAATGCTCAGGGCTGCTTaGTGCATGGGGTTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YTELRTLESLKWISNYSKMLRAA*CMGFMV Trigger: CACCATGAACCCCATGCACCAAGCAGCCCTGAGCAT...TTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| 3UTR CAA 72 bp | TGCTCCTGGCTTGGTCTGGGTTCACATTTACCGGAATaGTTTTCTGATAGCCAAAGTAGAAAGGAAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSWLGLGSHLPE*FSDSQSRKERG Trigger: GCCTCTTTCCTTTCTACTTTGGCTATCAGAAAACAATTCCGGTAAATGTGAACCCAGACCAAGCCAGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| 3UTR CAA 72 bp | ATCTTACTTGCTCATTCTTGCAGGGTTTTCAAAAGCTaGTCCCTCTACCTTCCTGTTGACAGTCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLAHSCRVFKS*SLYLPVDSQLL Trigger: GAGGAGCTGACTGTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGCAAGAATGAGCAAGTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CCA 90 bp | ACAGCTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTATTGCTCGGTGGGGTTaGAAGACAAGCTCTCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TALLQLDKFLFVLCCLWFIARWG*KTSSPH Trigger: ATGCGGAGAGCTTGTCTTCCAACCCCACCGAGCAAT...AAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR GCA 90 bp | TATAAAGGTCAAAATGTAGCAACAAAGCAATCGAAAACTGGGAGATGGAAATACGGCATGCTGAACGCCTaGTTGCTGTTCAGGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: YKGQNVATKQSKTGRWKYGMLNA*LLFRDI Trigger: GATGTCCCTGAACAGCAAGCAGGCGTTCAGCATGCC...GTATTTCCATCTCCCAGTTTTCGATTGCTTTGTTGCTACATTTTGACCTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CCA 90 bp | ATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAATGAATATATTGCTCGGTaGGGTTGGAAGACAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQNSELWRASNGSAITANEYIAR*GWKTSS Trigger: AGAGCTTGTCTTCCAACCCCACCGAGCAATATATTC...ATTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| 3UTR CAA 72 bp | AAACAAGAAACGAGGTCATATACAGAACTCAGAACTTaGGAGAGCCTCAAATGGATCAGCAATTACAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQETRSYTELRT*ESLKWISNYSK Trigger: TTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATATGACCTCGTTTCTTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS GCA 90 bp | GAAGACAAGCTCTCCGCATCGCCTCCGAGCCCCCGCCGCCGCCGCTaGCGCCGCTGCCACTGCTGCTGGAACTGCTGCTCCGGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: EDKLSASPPSPRRRR*RRCHCCWNCCSGRR Trigger: GCGGCGGCCGGAGCAGCAGTTCCAGCAGCAGTGGCAGCGGCGGCAGCGGCGGCGGCGGGGGCTCGGAGGCGATGCGGAGAGCTTGTCTTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS GCA 90 bp | GCTCAGGGCTGCTTGGTGCATGGGGTTCATGGTGGCCATGTGTGGTaGGTGAGCCGGAGTGGACACCACCGTGCCGTCGGGGCCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AQGCLVHGVHGGHVW*VSRSGHHRAVGARH Trigger: ATGGCGGGCCCCGACGGCACGGTGGTGTCCACTCCGGCTCACGCACCACACATGGCCACCATGAACCCCATGCACCAAGCAGCCCTGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS CCA 90 bp | CATGCTCAGGGCTGCTTGGTGCATGGGGTTCATGGTGGCCATGTGTaGTGCGTGAGCCGGAGTGGACACCACCGTGCCGTCGGGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HAQGCLVHGVHGGHV*CVSRSGHHRAVGAR Trigger: GCGGGCCCCGACGGCACGGTGGTGTCCACTCCGGCTCACGCACCACACATGGCCACCATGAACCCCATGCACCAAGCAGCCCTGAGCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS TCA 90 bp | AGGGCTGCTTGGTGCATGGGGTTCATGGTGGCCATGTGTGGTGCGTaGGCCGGAGTGGACACCACCGTGCCGTCGGGGCCCGCCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RAAWCMGFMVAMCGA*AGVDTTVPSGPAIA Trigger: AGCTATGGCGGGCCCCGACGGCACGGTGGTGTCCACTCCGGCTCACGCACCACACATGGCCACCATGAACCCCATGCACCAAGCAGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS CCA 90 bp | GGTGGTGGTGGTGATGGGTGCCAGCCAGAGCGGACGGGTGCGAGATaGGCACAGAAGAAGAGGAGGCTGCCGACGTGCACGGGATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGGGDGCQPERTGAR*AQKKRRLPTCTGWC Trigger: ACACCATCCCGTGCACGTCGGCAGCCTCCTCTTCTTCTGTGCCCATCTCGCACCCGTCCGCTCTGGCTGGCACCCATCACCACCACCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS CCA 90 bp | TCCACGTCGCTCATGCAGCCCATGTGCGAGGGCAGCCCATGTGCGTaGGCCATGCTCAGGGCTGCTTGGTGCATGGGGTTCATGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STSLMQPMCEGSPCA*AMLRAAWCMGFMVA Trigger: GGCCACCATGAACCCCATGCACCAAGCAGCCCTGAGCATGGCCCACGCACATGGGCTGCCCTCGCACATGGGCTGCATGAGCGACGTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS GCA 90 bp | GCGGCTGGTGATGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGGTaGCAGCCAGAGCGGACGGGTGCGAGATGGGCACAGAAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGDGGDGGGGGGDG*QPERTGARWAQKKR Trigger: CCTCTTCTTCTGTGCCCATCTCGCACCCGTCCGCTCTGGCTGGCACCCATCACCACCACCACCACCACCATCACCACCATCACCAGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS GCA 90 bp | CGCTCATGCAGCCCATGTGCGAGGGCAGCCCATGTGCGTGGGCCATaGTCAGGGCTGCTTGGTGCATGGGGTTCATGGTGGCCATGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSCSPCARAAHVRGP*SGLLGAWGSWWPCV Trigger: CACACATGGCCACCATGAACCCCATGCACCAAGCAGCCCTGAGCATGGCCCACGCACATGGGCTGCCCTCGCACATGGGCTGCATGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS TCA 90 bp | CTGTGTAGCGCCGAGTACTTGGGCTCCACGTGCAGGCTGCCTGCGTaGGGCATGCTGAACGCCTGCTTGCTGTTCAGGGACATCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: LCSAEYLGSTCRLPA*GMLNACLLFRDIII Trigger: GATGATGATGTCCCTGAACAGCAAGCAGGCGTTCAGCATGCCTCACGCAGGCAGCCTGCACGTGGAGCCCAAGTACTCGGCGCTACACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CAA 90 bp | CCGGTTCACAATCTCTCTGATTTGGGCTCAGCTGCTTGCTTCTTTGCTCCTGGCTATTGCTCGGTGGGGTaGGAAGACAAGCTCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVHNLSDLGSAACFFAPGYCSVG*EDKLSA Trigger: TGCGGAGAGCTTGTCTTCCAACCCCACCGAGCAATA...GCCAGGAGCAAAGAAGCAAGCAGCTGAGCCCAAATCAGAGAGATTGTGAACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CAA 90 bp | ATAGATAAGGTACCAGTCACTTTGTACCTATTTGTGTGTGTGCTCCAAAAGGATCCGCCGCCGCCAGCGTaGCTGGAGCTGCTAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IDKVPVTLYLFVCVLQKDPPPPA*LELLGE Trigger: TTCCCCTAGCAGCTCCAGCAACGCTGGCGGCGGCGG...ATCCTTTTGGAGCACACACACAAATAGGTACAAAGTGACTGGTACCTTATCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS-3UTR CAA 90 bp | AGCACCAAGTGGAGACTGCACCTAAGGCTGGGAAAGTATACACTGCTCATCGTTATGCTGAACGCCTGCTaGCTGTTCAGGGACATCATC | + |
|
Preference number: 5 (lower is better) Translates to: STKWRLHLRLGKYTLLIVMLNAC*LFRDII Trigger: GATGATGTCCCTGAACAGCAAGCAGGCGTTCAGCAT...AACGATGAGCAGTGTATACTTTCCCAGCCTTAGGTGCAGTCTCCACTTGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGCTCCAAAAGGATTCTACCAAACACTGTGAATTTACAAGCAGTGCATGTAGCGCCGAGTACTaGGGCTCCACGTGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCVLQKDSTKHCEFTSSACSAEY*GSTCRL Trigger: CAGCCTGCACGTGGAGCCCAAGTACTCGGCGCTACA...TGCACTGCTTGTAAATTCACAGTGTTTGGTAGAATCCTTTTGGAGCACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CAA 90 bp | CTTGCTCATTCTTGCAGGGTTTTCAAAAGCTTGTCCCTCTACCTTCCTGTTGACTTCTTCTCCGCGCCATaGAAGAGCTCCGGCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAHSCRVFKSLSLYLPVDFFSAP*KSSGLV Trigger: CACTAAGCCGGAGCTCTTCAATGGCGCGGAGAAGAA...GTCAACAGGAAGGTAGAGGGACAAGCTTTTGAAAACCCTGCAAGAATGAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTACAACTTGACAAATTCCTTTTCGTGTTGTGTTGTTTGTGGTTTTGGTTCTCCGAGGAGGGCCTaGGCTGGATGGCGAAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCYNLTNSFSCCVVCGFGSPRRA*AGWRSR Trigger: CCTACTTCGCCATCCAGCCAAGGCCCTCCTCGGAGA...ACCAAAACCACAAACAACACAACACGAAAAGGAATTTGTCAAGTTGTAGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CAA 90 bp | TATACAGAACTCAGAACTTTGGAGAGCCTCAAATGGATCAGCAATTACAGCAAACATGCTCAGGGCTGCTaGGTGCATGGGGTTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: YTELRTLESLKWISNYSKHAQGC*VHGVHG Trigger: ACCATGAACCCCATGCACCAAGCAGCCCTGAGCATG...TTTGCTGTAATTGCTGATCCATTTGAGGCTCTCCAAAGTTCTGAGTTCTGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGCTCCTGGCTTGGTCTGGGTTCACATTTACCGGAATTGTTTTCTGATACGCACCACATTTTTCTaGAGATCCAGCTTTTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FFAPGLVWVHIYRNCFLIRTTFF*RSSFSA Trigger: CGCCGAAAAGCTGGATCTCAAGAAAAATGTGGTGCG...TATCAGAAAACAATTCCGGTAAATGTGAACCCAGACCAAGCCAGGAGCAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS CAA 72 bp | CCTCCGCCTCCGCCGCCACCGCCGCCGCCGCCAGCGTaGCTGGAGCTGCTAGGGGAACTGGCCGAGGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPPPPPPPPPPA*LELLGELAEGA Trigger: GGCGCCCTCGGCCAGTTCCCCTAGCAGCTCCAGCAACGCTGGCGGCGGCGGCGGTGGCGGCGGAGGCGGAGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS GCA 72 bp | CCCGCCATAGCTCCCAGGGCCAGCCCGGGGCTTAGGTaGTCAAGCAGCTCGCCCTCCAGCGCCTGGTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PAIAPRASPGLR*SSSSPSSAWCG Trigger: GCCGCACCAGGCGCTGGAGGGCGAGCTGCTTGAGCACCTAAGCCCCGGGCTGGCCCTGGGAGCTATGGCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS TCA 72 bp | TGGTGCATGGGGTTCATGGTGGCCATGTGTGGTGCGTaGGCCGGAGTGGACACCACCGTGCCGTCGGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WCMGFMVAMCGA*AGVDTTVPSGP Trigger: GGGCCCCGACGGCACGGTGGTGTCCACTCCGGCTCACGCACCACACATGGCCACCATGAACCCCATGCACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS CCA 72 bp | AGGAGCCCGGGGAGGCACTGTGTAGCGCCGAGTACTTaGGCTCCACGTGCAGGCTGCCTGCGTGAGGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: RSPGRHCVAPST*APRAGCLREAC Trigger: GCATGCCTCACGCAGGCAGCCTGCACGTGGAGCCCAAGTACTCGGCGCTACACAGTGCCTCCCCGGGCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS CCA 72 bp | GGCTTGAAGGGGCTGTGGTGGGGCGGATGGTGGTGGTaGCTCTTACTCTGGGAGACGATGTCCACGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLKGLWWGGWWW*LLLWETMSTAA Trigger: GGCCGCCGTGGACATCGTCTCCCAGAGTAAGAGCCACCACCACCATCCGCCCCACCACAGCCCCTTCAAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
||
| CDS CCA 72 bp | GGTGATGGGTGCCAGCCAGAGCGGACGGGTGCGAGATaGGCACAGAAGAAGAGGAGGCTGCCGACGTGCACG | + |
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Preference number: 6 (lower is better) Translates to: GDGCQPERTGAR*AQKKRRLPTCT Trigger: CGTGCACGTCGGCAGCCTCCTCTTCTTCTGTGCCCATCTCGCACCCGTCCGCTCTGGCTGGCACCCATCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS GCA 72 bp | GATGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGGTaGCAGCCAGAGCGGACGGGTGCGAGATGGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: DGGDGGGGGGDG*QPERTGARWAQ Trigger: CTGTGCCCATCTCGCACCCGTCCGCTCTGGCTGGCACCCATCACCACCACCACCACCACCATCACCACCATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS GCA 72 bp | TGCTTGGTGCATGGGGTTCATGGTGGCCATGTGTGGTaGGTGAGCCGGAGTGGACACCACCGTGCCGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: CLVHGVHGGHVW*VSRSGHHRAVG Trigger: CCCGACGGCACGGTGGTGTCCACTCCGGCTCACGCACCACACATGGCCACCATGAACCCCATGCACCAAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS CCA 72 bp | GCGTCCGGCTTGAAGGGGCTGTGGTGGGGCGGATGGTaGTGGTGGCTCTTACTCTGGGAGACGATGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: ASGLKGLWWGGW*WWLLLWETMST Trigger: CGTGGACATCGTCTCCCAGAGTAAGAGCCACCACCACCATCCGCCCCACCACAGCCCCTTCAAGCCGGACGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS CCA 72 bp | GGCTGCTTGGTGCATGGGGTTCATGGTGGCCATGTGTaGTGCGTGAGCCGGAGTGGACACCACCGTGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: GCLVHGVHGGHV*CVSRSGHHRAV Trigger: GACGGCACGGTGGTGTCCACTCCGGCTCACGCACCACACATGGCCACCATGAACCCCATGCACCAAGCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS TCA 72 bp | GCCGAGTACTTGGGCTCCACGTGCAGGCTGCCTGCGTaGGGCATGCTGAACGCCTGCTTGCTGTTCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AEYLGSTCRLPA*GMLNACLLFRD Trigger: GTCCCTGAACAGCAAGCAGGCGTTCAGCATGCCTCACGCAGGCAGCCTGCACGTGGAGCCCAAGTACTCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS CCA 72 bp | GGGCCATGCTCAGGGCTGCTTGGTGCATGGGGTTCATaGTGGCCATGTGTGGTGCGTGAGCCGGAGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: GPCSGLLGAWGS*WPCVVREPEWT Trigger: TGTCCACTCCGGCTCACGCACCACACATGGCCACCATGAACCCCATGCACCAAGCAGCCCTGAGCATGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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| CDS TCA 72 bp | TGGGCTCCACGTGCAGGCTGCCTGCGTGAGGCATGCTaGACGCCTGCTTGCTGTTCAGGGACATCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: WAPRAGCLREAC*TPACCSGTSSS Trigger: TGATGATGATGTCCCTGAACAGCAAGCAGGCGTTCAGCATGCCTCACGCAGGCAGCCTGCACGTGGAGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034115.5 |
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