Pregenerated sensors for POU4F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048349Ensembl transcript IDs: ENSMUST00000053016.10
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTGTGAGTTaGCAGCTAAAGGAGTCTAACAGGAGCTCGCTCAGTCCTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: HCLLLRSLLLTFSVS*QLKESNRSSLSPSW Trigger: CCAGGAAGGACTGAGCGAGCTCCTGTTAGACTCCTTTAGCTGTCAACTCACAGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR TCA 90 bp | GACCTACAGAAAAAGCAGAATCCCATAGAGTTCAGAAAGCAGTTTTaGGAGGAAGGTAGCATTTCTGTGGTGAGTGCACTCAACGCATAT | + |
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Preference number: 1 (lower is better) Translates to: DLQKKQNPIEFRKQF*EEGSISVVSALNAY Trigger: ATATGCGTTGAGTGCACTCACCACAGAAATGCTACCTTCCTCTCAAAACTGCTTTCTGAACTCTATGGGATTCTGCTTTTTCTGTAGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR TCA 90 bp | CGAATTAGACAAAAGTCTATCCCGAAGCTAGCTGATGGATGCTGGTaGCATCCTTTCTTAGACCTACAGAAAAAGCAGAATCCCATAGAG | + |
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Preference number: 1 (lower is better) Translates to: RIRQKSIPKLADGCW*HPFLDLQKKQNPIE Trigger: CTCTATGGGATTCTGCTTTTTCTGTAGGTCTAAGAAAGGATGTCACCAGCATCCATCAGCTAGCTTCGGGATAGACTTTTGTCTAATTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR TCA 90 bp | ATACTTTGCAGGTGCCTGGTTGTTTACAGCTTACCATCACCACTCTaGAACCAACGAAGTGGCTTAAAAGCTTCTGCAGATAAAATTAAA | + |
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Preference number: 1 (lower is better) Translates to: ILCRCLVVYSLPSPL*NQRSGLKASADKIK Trigger: TTTAATTTTATCTGCAGAAGCTTTTAAGCCACTTCGTTGGTTTCAGAGTGGTGATGGTAAGCTGTAAACAACCAGGCACCTGCAAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR TCA 90 bp | TCTAAAGAGTCTATCACAGAATCAGAGCCCAGTTCCCCTACCTTCTaGAACTTCTGTTCTTTAGAGGAGTTCAGACTCACACATTTTATT | + |
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Preference number: 1 (lower is better) Translates to: SKESITESEPSSPTF*NFCSLEEFRLTHFI Trigger: AATAAAATGTGTGAGTCTGAACTCCTCTAAAGAACAGAAGTTTCAGAAGGTAGGGGAACTGGGCTCTGATTCTGTGATAGACTCTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | AGACCATCTCCACATGAGATCCAAAGGGGATCTTCTACACAACAAAGCAGGCATACTCCTGCCCCCAAATaGGAGCAGAAACTTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RPSPHEIQRGSSTQQSRHTPAPK*EQKLLS Trigger: GCTGAGAAGTTTCTGCTCTCATTTGGGGGCAGGAGT...ATGCCTGCTTTGTTGTGTAGAAGATCCCCTTTGGATCTCATGTGGAGATGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATTAGCAGCTGTGCTCAGCTCCCCAGTGTaGCCCACCCGGCGTCTCACA | + |
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Preference number: 2 (lower is better) Translates to: FFRGVQTHTFYFHKLAAVLSSPV*PTRRLT Trigger: TGTGAGACGCCGGGTGGGGCACACTGGGGAGCTGAG...CACAGCTGCTAATTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR GCA 90 bp | TTTTCGAGTAGAACAGCACATTCAAACCTCTCGATGCCTGAATCCCTGACCTTCCTTACATGGGACTCCTaGCCCCAAATGAGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FSSRTAHSNLSMPESLTFLTWDS*PQMRAE Trigger: TTCTGCTCTCATTTGGGGGCAGGAGTCCCATGTAAG...GAAGGTCAGGGATTCAGGCATCGAGAGGTTTGAATGTGCTGTTCTACTCGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGAAGTGGACTGGGACACATCTCCCTGTTGTATGTTGGCGCACAGAAATGAACGCCTACCCAGAGTaGGACCTAATCACATTTCTT | + |
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Preference number: 2 (lower is better) Translates to: IWKWTGTHLPVVCWRTEMNAYPE*DLITFL Trigger: AAGAAATGTGATTAGGTCTCACTCTGGGTAGGCGTT...CATTTCTGTGCGCCAACATACAACAGGGAGATGTGTCCCAGTCCACTTCCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR CAA 90 bp | ATGCACCCAGATCATAAAACTGCTCTTCTTTCAGTCATGTTTTATTaGGAAGTGGACTGGGACACATCTCCCTGTTGTATGTTGGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: MHPDHKTALLSVMFY*EVDWDTSPCCMLAH Trigger: GTGCGCCAACATACAACAGGGAGATGTGTCCCAGTCCACTTCCAAATAAAACATGACTGAAAGAAGAGCAGTTTTATGATCTGGGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR CAA 90 bp | TCAAACCTCTCGATGCCTGAATCCCTGACCTTCAACTTAAATACTTaGCAGGTGCCTGGTTGTTTACAGCTTACCATCACCACTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SNLSMPESLTFNLNT*QVPGCLQLTITTLK Trigger: TTTCAGAGTGGTGATGGTAAGCTGTAAACAACCAGGCACCTGCAAAGTATTTAAGTTGAAGGTCAGGGATTCAGGCATCGAGAGGTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR CAA 90 bp | AGCAGCTGTGGGAGGAAATTTTCCCGACTTTCTGAACCAGAGAACTaGAAAAAGCCTAACTACCACAGATCAGCAAATCATTGCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSCGRKFSRLSEPEN*KKPNYHRSANHCLL Trigger: GAGAAGGCAATGATTTGCTGATCTGTGGTAGTTAGGCTTTTTCAAGTTCTCTGGTTCAGAAAGTCGGGAAAATTTCCTCCCACAGCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | TTTTCGAGTAGAACAGCACATTCAAACCTCTCGATGCCTGAATCCCTGACCTTCAGGAGGATCAGTCAGTaGGACATTTCAGGATTAACA | + |
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Preference number: 2 (lower is better) Translates to: FSSRTAHSNLSMPESLTFRRISQ*DISGLT Trigger: TGTTAATCCTGAAATGTCTCACTGACTGATCCTCCT...GAAGGTCAGGGATTCAGGCATCGAGAGGTTTGAATGTGCTGTTCTACTCGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGAAGTGGACTGGGACACATCTCCCTGTTGTATGTTGGCGCACAGAAATGGTGCTCAGTTTCAAATaGATAGAATGTTTTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: IWKWTGTHLPVVCWRTEMVLSFK*IECFVL Trigger: CAGCACAAAACATTCTATGCATTTGAAACTGAGCAC...CATTTCTGTGCGCCAACATACAACAGGGAGATGTGTCCCAGTCCACTTCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR GCA 90 bp | CACAGATCAGCAAATCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTCCTGCCTCCCCCTCTTaGGTGATTTTAAAGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: HRSANHCLLLRSLLLTFSPASPS*VILKFG Trigger: ACCAAACTTTAAAATCACGCAAGAGGGGGAGGCAGG...AGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGATTTGCTGATCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTCTTAGACCTACAGAAAAAGCAGAATCCCATAGAGTTCAGAAAGCAGTTTGTACATTTGGCATTTaGTCTAGTTCCAGGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: SFLRPTEKAESHRVQKAVCTFGI*SSSRSP Trigger: TGGTGACCTGGAACTAGATCAAATGCCAAATGTACA...AACTGCTTTCTGAACTCTATGGGATTCTGCTTTTTCTGTAGGTCTAAGAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CCA 90 bp | TTAATTTTGCACAGTTTCCTACTACATAAAATAGGAAACCCTGCAAAGCGATGCGTGATTTTTCTTACATaGGACTCCTGCCCCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: LILHSFLLHKIGNPAKRCVIFLT*DSCPQM Trigger: CATTTGGGGGCAGGAGTCCCATGTAAGAAAAATCAC...GCATCGCTTTGCAGGGTTTCCTATTTTATGTAGTAGGAAACTGTGCAAAATTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATTAGCAGCTGTGGCACCTTTCGAGCCATaGATGATTTCAGTCTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: FFRGVQTHTFYFHKLAAVAPFEP*MISVLL Trigger: TAACAAGACTGAAATCATGCATGGCTCGAAAGGTGC...CACAGCTGCTAATTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR GCA 90 bp | CACAGATCAGCAAATCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTAATCACATTTCTTTCTaGACCTTTCGAGCCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: HRSANHCLLLRSLLLTFSNHISF*TFRAMH Trigger: ATGCATGGCTCGAAAGGTGCAGAAAGAAATGTGATT...AGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGATTTGCTGATCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTCTTAGACCTACAGAAAAAGCAGAATCCCATAGAGTTCAGAAAGCAGTTCTGTGTGTGGGCCTGTaGATGAAAGAAAATATTTAC | + |
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Preference number: 2 (lower is better) Translates to: SFLRPTEKAESHRVQKAVLCVGL*MKENIY Trigger: GTAAATATTTTCTTTCATGCACAGGCCCACACACAG...AACTGCTTTCTGAACTCTATGGGATTCTGCTTTTTCTGTAGGTCTAAGAAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | CACAGATCAGCAAATCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTAAATTGAAGTTTTTGTaGCTCAACATTTATCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: HRSANHCLLLRSLLLTFSKLKFL*LNIYPR Trigger: CCGGGGATAAATGTTGAGTCACAAAAACTTCAATTT...AGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGATTTGCTGATCTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | CTGAAACTTCTGTTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAAACAGGCAGTAGACTGTaGAATCACACTATCCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LKLLFFRGVQTHTFYFHKTGSRL*NHTIHK Trigger: TTTGTGGATAGTGTGATTTCACAGTCTACTGCCTGT...TTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAACAGAAGTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTCTTAGACCTACAGAAAAAGCAGAATCCCATAGAGTTCAGAAAGCAGTTGTGTGGGCCTGTGCATaGAAGAAAATATTTACAATA | + |
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Preference number: 2 (lower is better) Translates to: SFLRPTEKAESHRVQKAVVWACA*KKIFTI Trigger: TATTGTAAATATTTTCTTTCATGCACAGGCCCACAC...AACTGCTTTCTGAACTCTATGGGATTCTGCTTTTTCTGTAGGTCTAAGAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | CTGAAACTTCTGTTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAACTGAACCAGAGAACTTaGAAAAGCCTAACTACCACA | + |
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Preference number: 2 (lower is better) Translates to: LKLLFFRGVQTHTFYFHKLNQRT*KSLTTT Trigger: TGTGGTAGTTAGGCTTTTTCAAGTTCTCTGGTTCAG...TTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAACAGAAGTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR TCA 90 bp | TTAATTTTGCACAGTTTCCTACTACATAAAATAGGAAACCCTGCAAAGCGATGCATTTTAAAGTTTGGTTaGGGCTTTCTGTTTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LILHSFLLHKIGNPAKRCILKFG*GFLFGV Trigger: CACACCAAACAGAAAGCCTCAACCAAACTTTAAAAT...GCATCGCTTTGCAGGGTTTCCTATTTTATGTAGTAGGAAACTGTGCAAAATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR CCA 72 bp | TGGAAGTGGACTGGGACACATCTCCCTGTTGTATGTTaGCGCACAGAAATGGTTCTGATGGGGTGGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: WKWTGTHLPVVC*RTEMVLMGWGG Trigger: CCCACCCCACCCCATCAGAACCATTTCTGTGCGCCAACATACAACAGGGAGATGTGTCCCAGTCCACTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR CCA 72 bp | CTAAAGGAGTCTAACAGGAGCTCGCTCAGTCCTTCCTaGCCTGAACACATCCACTCACTAGAAAGCAAAACT | + |
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Preference number: 3 (lower is better) Translates to: LKESNRSSLSPS*PEHIHSLESKT Trigger: AGTTTTGCTTTCTAGTGAGTGGATGTGTTCAGGCCAGGAAGGACTGAGCGAGCTCCTGTTAGACTCCTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | TCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTGTGAGTTGACAGCTCCCTGCCTCCCCCTCTaGCGTGATTTTAAAGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SLPSLEESPFNIFCELTAPCLPL*RDFKVW Trigger: CCAAACTTTAAAATCACGCAAGAGGGGGAGGCAGGG...AGCTGTCAACTCACAGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR GCA 72 bp | CGCCTACCCAGAGTGAGACCTAATCACATTTCTTTCTaGACCTTTCGAGCCATGCATGATTTCAGTCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: RLPRVRPNHISF*TFRAMHDFSLV Trigger: AACAAGACTGAAATCATGCATGGCTCGAAAGGTGCAGAAAGAAATGTGATTAGGTCTCACTCTGGGTAGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR TCA 72 bp | CTCTTGAGGAGTCTCCTTTTAACATTTTCTGTGAGTTaGCAGCTAAAGGAGTCTAACAGGAGCTCGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: LLRSLLLTFSVS*QLKESNRSSLS Trigger: ACTGAGCGAGCTCCTGTTAGACTCCTTTAGCTGTCAACTCACAGAAAATGTTAAAAGGAGACTCCTCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR TCA 72 bp | TCTATCACAGAATCAGAGCCCAGTTCCCCTACCTTCTaGAACTTCTGTTCTTTAGAGGAGTTCAGACTCACA | + |
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Preference number: 3 (lower is better) Translates to: SITESEPSSPTF*NFCSLEEFRLT Trigger: TGTGAGTCTGAACTCCTCTAAAGAACAGAAGTTTCAGAAGGTAGGGGAACTGGGCTCTGATTCTGTGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR GCA 72 bp | GACCTAATCACATTTCTTTCTGCACCTTTCGAGCCATaGATGATTTCAGTCTTGTTAAACAGTGCTTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: DLITFLSAPFEP*MISVLLNSASP Trigger: GGGGGAAGCACTGTTTAACAAGACTGAAATCATGCATGGCTCGAAAGGTGCAGAAAGAAATGTGATTAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR TCA 72 bp | AAAAAGCAGAATCCCATAGAGTTCAGAAAGCAGTTTTaGGAGGAAGGTAGCATTTCTGTGGTGAGTGCACTC | + |
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Preference number: 3 (lower is better) Translates to: KKQNPIEFRKQF*EEGSISVVSAL Trigger: GAGTGCACTCACCACAGAAATGCTACCTTCCTCTCAAAACTGCTTTCTGAACTCTATGGGATTCTGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | CACAGATCAGCAAATCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTTCTCCCTGTTGTATGTaGGCGCACAGAAATGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: HRSANHCLLLRSLLLTFSSPCCM*AHRNGS Trigger: AGAACCATTTCTGTGCGCCAACATACAACAGGGAGA...AGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGATTTGCTGATCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATTAGCAGCTGTGGTTGTTTTCTCTCATTaGTTGACCGGCCCTACCAGG | + |
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Preference number: 3 (lower is better) Translates to: FFRGVQTHTFYFHKLAAVVVFSH*LTGPTR Trigger: CCTGGTAGGGCCGGTCAACAAATGAGAGAAAACAAC...CACAGCTGCTAATTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | CACAGATCAGCAAATCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTTTTGCAGGTGCCTGGTaGTTTACAGCTTACCATCAC | + |
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Preference number: 3 (lower is better) Translates to: HRSANHCLLLRSLLLTFSFAGAW*FTAYHH Trigger: GTGATGGTAAGCTGTAAACAACCAGGCACCTGCAAA...AGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGATTTGCTGATCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATTAGCAGCTGTGCGGCCCTACCAGGACTaGGCTCAATATAAACACAAA | + |
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Preference number: 3 (lower is better) Translates to: FFRGVQTHTFYFHKLAAVRPYQD*AQYKHK Trigger: TTTGTGTTTATATTGAGCCAAGTCCTGGTAGGGCCG...CACAGCTGCTAATTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | TCCTTTCTTAGACCTACAGAAAAAGCAGAATCCCATAGAGTTCAGAAAGCAGTTGAAGCATTTGACAAGTaGTTGGGGCAGATCATAGGA | + |
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Preference number: 3 (lower is better) Translates to: SFLRPTEKAESHRVQKAVEAFDK*LGQIIG Trigger: TCCTATGATCTGCCCCAACAACTTGTCAAATGCTTC...AACTGCTTTCTGAACTCTATGGGATTCTGCTTTTTCTGTAGGTCTAAGAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | TCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTGTGAGTTGACAGCTGTTGAGGCTTTCTGTTaGGTGTGGGTTATTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: SLPSLEESPFNIFCELTAVEAFC*VWVICF Trigger: AAAACAAATAACCCACACCAAACAGAAAGCCTCAAC...AGCTGTCAACTCACAGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR TCA 72 bp | GGAGGAAATTTTCCCGACTTTCTGAACCAGAGAACTTaGAAAAGCCTAACTACCACAGATCAGCAAATCATT | + |
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Preference number: 3 (lower is better) Translates to: GGNFPDFLNQRT*KSLTTTDQQII Trigger: AATGATTTGCTGATCTGTGGTAGTTAGGCTTTTTCAAGTTCTCTGGTTCAGAAAGTCGGGAAAATTTCCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | CTGAAACTTCTGTTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATGCATGATTTCAGTCTaGTTAAACAGTGCTTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: LKLLFFRGVQTHTFYFHKCMISV*LNSASP Trigger: GGGGGAAGCACTGTTTAACAAGACTGAAATCATGCA...TTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAACAGAAGTTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR-3UTR CAA 90 bp | TCCTTTCTTAGACCTACAGAAAAAGCAGAATCCCATAGAGTTCAGAAAGCAGTTTTCAACTTAAATACTTaGCAGGTGCCTGGTTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: SFLRPTEKAESHRVQKAVFNLNT*QVPGCL Trigger: TAAACAACCAGGCACCTGCAAAGTATTTAAGTTGAA...AACTGCTTTCTGAACTCTATGGGATTCTGCTTTTTCTGTAGGTCTAAGAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR CCA 90 bp | ACATCTCCCTGTTGTATGTTGGCGCACAGAAATGGTTCTGATGGGGTGGGGTGGCGGACGGCATGTTCATaGCCGCCGCCGCCGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TSPCCMLAHRNGSDGVGWRTACS*PPPPRG Trigger: ACCCCGCGGCGGCGGCGGCCATGAACATGCCGTCCG...CCACCCCACCCCATCAGAACCATTTCTGTGCGCCAACATACAACAGGGAGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR GCA 90 bp | CTTTTCAACAACTTCACGGTTCTCCAAAGGAGGGAGACAGGGACCCCTCAGCTCATGTGCGGGTGCGGATaGGCCGAGCCGCCCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LFNNFTVLQRRETGTPQLMCGCG*AEPPKS Trigger: GCTCTTGGGCGGCTCGGCGCATCCGCACCCGCACAT...GAGCTGAGGGGTCCCTGTCTCCCTCCTTTGGAGAACCGTGAAGTTGTTGAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR CCA 90 bp | AGACCATCTCCACATGAGATCCAAAGGGGATCTTCTACACAACAAAGCAGGCATGGCAGGCCCGCCGGATaGCCTCGGAGCTGGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RPSPHEIQRGSSTQQSRHGRPAG*PRSWSA Trigger: TGCACTCCAGCTCCGAGGCCATCCGGCGGGCCTGCC...ATGCCTGCTTTGTTGTGTAGAAGATCCCCTTTGGATCTCATGTGGAGATGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR GCA 90 bp | AGACCATCTCCACATGAGATCCAAAGGGGATCTTCTACACAACAAAGCAGGCATGCGAAGAGGTTGCTCTaGAGCGGCGGCGTGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RPSPHEIQRGSSTQQSRHAKRLL*SGGVGR Trigger: CCTGCCCACGCCGCCGCTGCAGAGCAACCTCTTCGC...ATGCCTGCTTTGTTGTGTAGAAGATCCCCTTTGGATCTCATGTGGAGATGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR GCA 90 bp | TGCCCCCAAATGAGAGCAGAAACTTCTCAGCTTTTCAACAACTTCACGGTTCTCTGGTGGTGGTGGTGGTaGGCCAGCGGCACGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPQMRAETSQLFNNFTVLWWWWW*ASGTVD Trigger: GTCCACCGTGCCGCTGGCGCACCACCACCACCACCA...GAGAACCGTGAAGTTGTTGAAAAGCTGAGAAGTTTCTGCTCTCATTTGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| 3UTR CAA 72 bp | TTGGAAGTGGACTGGGACACATCTCCCTGTTGTATGTaGGCGCACAGAAATGGTTCTGATGGGGTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEVDWDTSPCCM*AHRNGSDGVGW Trigger: CCACCCCACCCCATCAGAACCATTTCTGTGCGCCAACATACAACAGGGAGATGTGTCCCAGTCCACTTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR TCA 90 bp | TGCCCCCAAATGAGAGCAGAAACTTCTCAGCTTTTCAACAACTTCACGGTTCTCACGTGGCGTCCGGCTTaGAAGGGTGGCTCTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPQMRAETSQLFNNFTVLTWRPA*KGGSCP Trigger: AGGGCAAGAGCCACCCTTTCAAGCCGGACGCCACGT...GAGAACCGTGAAGTTGTTGAAAAGCTGAGAAGTTTCTGCTCTCATTTGGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | TGGTTAAATGATAGTAACAGACCATCTCCACATGAGATCCAAAGGGGATCTTCTTGTCCGAGTCGCAGATaGACGCCAGGCCCGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WLNDSNRPSPHEIQRGSSCPSRR*TPGPPR Trigger: GCGCGGCGGGCCTGGCGTCCATCTGCGACTCGGACA...AGAAGATCCCCTTTGGATCTCATGTGGAGATGGTCTGTTACTATCATTTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR GCA 90 bp | TCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTGTGAGTTGACAGCTAGGTGGCCCAGGCCGTaGATGTGCGGGTGCGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEESPFNIFCELTARWPRP*MCGCGC Trigger: GCATCCGCACCCGCACATGCACGGCCTGGGCCACCT...AGCTGTCAACTCACAGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR CCA 90 bp | TGGTTAAATGATAGTAACAGACCATCTCCACATGAGATCCAAAGGGGATCTTCTTGGTGGTGGTGGTGGTaGTGCGCCAGCGGCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLNDSNRPSPHEIQRGSSWWWWW*CASGTV Trigger: CACCGTGCCGCTGGCGCACCACCACCACCACCACCA...AGAAGATCCCCTTTGGATCTCATGTGGAGATGGTCTGTTACTATCATTTAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTTAGACCTACAGAAAAAGCAGAATCCCATAGAGTTCAGAAAGCAGTTGGCTGGCGAAGAGGTTaGTCTGCAGCGGCGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLRPTEKAESHRVQKAVGWRRG*SAAAAW Trigger: CCACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCC...AACTGCTTTCTGAACTCTATGGGATTCTGCTTTTTCTGTAGGTCTAAGAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | TTAATTTTGCACAGTTTCCTACTACATAAAATAGGAAACCCTGCAAAGCGATGCGCGGGGTGCGACAGGTaGCCCAGGCCGTGCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LILHSFLLHKIGNPAKRCAGCDR*PRPCMC Trigger: GCACATGCACGGCCTGGGCCACCTGTCGCACCCCGC...GCATCGCTTTGCAGGGTTTCCTATTTTATGTAGTAGGAAACTGTGCAAAATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR GCA 90 bp | TCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTGTGAGTTGACAGCTGCCTCGGAGCTGGAGTaGAGCGACGGGTACTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEESPFNIFCELTAASELE*SDGYLC Trigger: GCACAAGTACCCGTCGCTGCACTCCAGCTCCGAGGC...AGCTGTCAACTCACAGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | AGACCATCTCCACATGAGATCCAAAGGGGATCTTCTACACAACAAAGCAGGCATTGTGCTCAGGGAGGGTaGGATGCATGGCAAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPSPHEIQRGSSTQQSRHCAQGG*DAWQSE Trigger: CTCACTTTGCCATGCATCCCACCCTCCCTGAGCACA...ATGCCTGCTTTGTTGTGTAGAAGATCCCCTTTGGATCTCATGTGGAGATGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATTAGCAGCTGTGGGGTGGCTCTTGCCCTaGGACACCGCGATGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: FFRGVQTHTFYFHKLAAVGWLLP*DTAMST Trigger: CGTGGACATCGCGGTGTCCCAGGGCAAGAGCCACCC...CACAGCTGCTAATTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | TCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTGTGAGTTGACAGCTTCCGGCTTGAAAGGGTaGCTCTTGCCCTGGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEESPFNIFCELTASGLKG*LLPWDT Trigger: GGTGTCCCAGGGCAAGAGCCACCCTTTCAAGCCGGA...AGCTGTCAACTCACAGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | TTAATTTTGCACAGTTTCCTACTACATAAAATAGGAAACCCTGCAAAGCGATGCGACGGCGACGAGATGTaGTCCAGCAGGTCACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LILHSFLLHKIGNPAKRCDGDEM*SSRSPG Trigger: GCCCGGTGACCTGCTGGACCACATCTCGTCGCCGTC...GCATCGCTTTGCAGGGTTTCCTATTTTATGTAGTAGGAAACTGTGCAAAATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | TGGTTAAATGATAGTAACAGACCATCTCCACATGAGATCCAAAGGGGATCTTCTGGAGGGTGGGATGCATaGCAAAGTGAGGCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLNDSNRPSPHEIQRGSSGGWDA*QSEAAC Trigger: GCAAGCAGCCTCACTTTGCCATGCATCCCACCCTCC...AGAAGATCCCCTTTGGATCTCATGTGGAGATGGTCTGTTACTATCATTTAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATTAGCAGCTGTGGGATGGCCTCGGAGCTaGAGTGCAGCGACGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FFRGVQTHTFYFHKLAAVGWPRS*SAATGT Trigger: AGTACCCGTCGCTGCACTCCAGCTCCGAGGCCATCC...CACAGCTGCTAATTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | CTGAAACTTCTGTTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAAGCGGCACGGTGGACGTaGACGTGCAGGGCACGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LKLLFFRGVQTHTFYFHKAARWT*TCRARY Trigger: ATAGCGTGCCCTGCACGTCCACGTCCACCGTGCCGC...TTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAACAGAAGTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR GCA 90 bp | TTAATTTTGCACAGTTTCCTACTACATAAAATAGGAAACCCTGCAAAGCGATGCCGATGGAAGTCCGCTTaGGCTTCTTCTCGCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LILHSFLLHKIGNPAKRCRWKSA*ASSRRR Trigger: ACGGCGGCGAGAAGAAGCGCAAGCGGACTTCCATCG...GCATCGCTTTGCAGGGTTTCCTATTTTATGTAGTAGGAAACTGTGCAAAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| 3UTR CAA 72 bp | TCGATGCCTGAATCCCTGACCTTCAACTTAAATACTTaGCAGGTGCCTGGTTGTTTACAGCTTACCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: SMPESLTFNLNT*QVPGCLQLTIT Trigger: GGTGATGGTAAGCTGTAAACAACCAGGCACCTGCAAAGTATTTAAGTTGAAGGTCAGGGATTCAGGCATCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR TCA 90 bp | CTGAAACTTCTGTTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATCTTCTCGCCGCCGTTaGAGAGCTCCGGCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKLLFFRGVQTHTFYFHKSSRRR*RAPACS Trigger: TGAACAAGCCGGAGCTCTTCAACGGCGGCGAGAAGA...TTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAACAGAAGTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CCA 90 bp | TCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTGTGAGTTGACAGCTTTCTGCTTCTGTCTCTaGTTGCAAAACCACACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSLEESPFNIFCELTAFCFCL*LQNHTR Trigger: GCGGGTGTGGTTTTGCAACCAGAGACAGAAGCAGAA...AGCTGTCAACTCACAGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS TCA 90 bp | CGCCGCCGCCGCCTCCCGCCGCGCCTGCGCCCCCTGCGCCGGCCATaGGCGCGAGCGACGGCGACGAGATGTGGTCCAGCAGGTCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRRLPPRLRPLRRP*ARATATRCGPAGHR Trigger: CCGGTGACCTGCTGGACCACATCTCGTCGCCGTCGCTCGCGCTCATGGCCGGCGCAGGGGGCGCAGGCGCGGCGGGAGGCGGCGGCGGCG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS CCA 90 bp | CGGCCGCCAGCGCCTCGGCCCGCGCCAGCAGCGTCTCGTCCAGGCTaGCGAAGAGGTTGCTCTGCAGCGGCGGCGTGGGCAGGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPAPRPAPAASRPG*RRGCSAAAAWAGRP Trigger: GGGCCTGCCTGCCCACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCCTGGACGAGACGCTGCTGGCGCGGGCCGAGGCGCTGGCGGCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS GCA 90 bp | TGCGGCAGCCCGGACGGCATGTTCATGGCCGCCGCCGCCGCGGGGTaGGACAGGTGGCCCAGGCCGTGCATGTGCGGGTGCGGATGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGSPDGMFMAAAAAG*DRWPRPCMCGCGCA Trigger: GGCGCATCCGCACCCGCACATGCACGGCCTGGGCCACCTGTCGCACCCCGCGGCGGCGGCGGCCATGAACATGCCGTCCGGGCTGCCGCA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS GCA 90 bp | GCCCGCGCCAGCAGCGTCTCGTCCAGGCTGGCGAAGAGGTTGCTCTaGAGCGGCGGCGTGGGCAGGCAGGCCCGCCGGATGGCCTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARASSVSSRLAKRLL*SGGVGRQARRMASE Trigger: CTCCGAGGCCATCCGGCGGGCCTGCCTGCCCACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCCTGGACGAGACGCTGCTGGCGCGGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS GCA 90 bp | CCTCGGCCCGCGCCAGCAGCGTCTCGTCCAGGCTGGCGAAGAGGTTaGTCTGCAGCGGCGGCGTGGGCAGGCAGGCCCGCCGGATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRPAPAASRPGWRRG*SAAAAWAGRPAGWP Trigger: AGGCCATCCGGCGGGCCTGCCTGCCCACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCCTGGACGAGACGCTGCTGGCGCGGGCCGAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 90 bp | GCGCCCCCTGCGCCGGCCATGAGCGCGAGCGACGGCGACGAGATGTaGTCCAGCAGGTCACCGGGCTCGAGCGCCTGGTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: APPAPAMSASDGDEM*SSRSPGSSAWWWWW Trigger: CCACCACCACCACCAGGCGCTCGAGCCCGGTGACCTGCTGGACCACATCTCGTCGCCGTCGCTCGCGCTCATGGCCGGCGCAGGGGGCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS GCA 90 bp | GGCGGCGTGGGCAGGCAGGCCCGCCGGATGGCCTCGGAGCTGGAGTaGAGCGACGGGTACTTGTGCTCAGGGAGGGTGGGATGCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGVGRQARRMASELE*SDGYLCSGRVGCMA Trigger: TGCCATGCATCCCACCCTCCCTGAGCACAAGTACCCGTCGCTGCACTCCAGCTCCGAGGCCATCCGGCGGGCCTGCCTGCCCACGCCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 90 bp | GGCGACGAGATGTGGTCCAGCAGGTCACCGGGCTCGAGCGCCTGGTaGTGGTGGTGGTGGTGGTGGTGGTGCGCCAGCGGCACGGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GDEMWSSRSPGSSAW*WWWWWWWCASGTVD Trigger: GTCCACCGTGCCGCTGGCGCACCACCACCACCACCACCACCACCACCAGGCGCTCGAGCCCGGTGACCTGCTGGACCACATCTCGTCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 90 bp | GACGGCGACGAGATGTGGTCCAGCAGGTCACCGGGCTCGAGCGCCTaGTGGTGGTGGTGGTGGTGGTGGTGGTGCGCCAGCGGCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DGDEMWSSRSPGSSA*WWWWWWWWCASGTV Trigger: CACCGTGCCGCTGGCGCACCACCACCACCACCACCACCACCACCAGGCGCTCGAGCCCGGTGACCTGCTGGACCACATCTCGTCGCCGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 90 bp | AGAGGTTGCTCTGCAGCGGCGGCGTGGGCAGGCAGGCCCGCCGGATaGCCTCGGAGCTGGAGTGCAGCGACGGGTACTTGTGCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGCSAAAAWAGRPAG*PRSWSAATGTCAQG Trigger: TCCCTGAGCACAAGTACCCGTCGCTGCACTCCAGCTCCGAGGCCATCCGGCGGGCCTGCCTGCCCACGCCGCCGCTGCAGAGCAACCTCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 90 bp | ATGTGGTCCAGCAGGTCACCGGGCTCGAGCGCCTGGTGGTGGTGGTaGTGGTGGTGGTGGTGCGCCAGCGGCACGGTGGACGTGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: MWSSRSPGSSAWWWW*WWWWCASGTVDVDV Trigger: CACGTCCACGTCCACCGTGCCGCTGGCGCACCACCACCACCACCACCACCACCACCAGGCGCTCGAGCCCGGTGACCTGCTGGACCACAT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 90 bp | CCTCGGAGCTGGAGTGCAGCGACGGGTACTTGTGCTCAGGGAGGGTaGGATGCATGGCAAAGTGAGGCTGCTTGCTGTTCATGGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSWSAATGTCAQGG*DAWQSEAACCSWTS Trigger: TGATGTCCATGAACAGCAAGCAGCCTCACTTTGCCATGCATCCCACCCTCCCTGAGCACAAGTACCCGTCGCTGCACTCCAGCTCCGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR CAA 90 bp | ACATCTCCCTGTTGTATGTTGGCGCACAGAAATGGTTCTGATGGGGTGGGGTGGTTGAAAGGGTGGCTCTaGCCCTGGGACACCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSPCCMLAHRNGSDGVGWLKGWL*PWDTAM Trigger: CATCGCGGTGTCCCAGGGCAAGAGCCACCCTTTCAA...CCACCCCACCCCATCAGAACCATTTCTGTGCGCCAACATACAACAGGGAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR CAA 90 bp | CACAGATCAGCAAATCATTGCCTTCTCTTGAGGAGTCTCCTTTTAACATTTTCTAGGCTGGCGAAGAGGTaGCTCTGCAGCGGCGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRSANHCLLLRSLLLTFSRLAKR*LCSGGV Trigger: CACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCCT...AGAAAATGTTAAAAGGAGACTCCTCAAGAGAAGGCAATGATTTGCTGATCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR CAA 90 bp | AGAGTGAGACCTAATCACATTTCTTTCTGCACCTTTCGAGCCATGCATGATTTCTACGTGGCGTCCGGCTaGAAAGGGTGGCTCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVRPNHISFCTFRAMHDFYVASG*KGWLLP Trigger: GGGCAAGAGCCACCCTTTCAAGCCGGACGCCACGTA...GAAATCATGCATGGCTCGAAAGGTGCAGAAAGAAATGTGATTAGGTCTCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR CAA 90 bp | CTGAAACTTCTGTTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATGCAGCGACGGGTACTaGTGCTCAGGGAGGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LKLLFFRGVQTHTFYFHKCSDGY*CSGRVG Trigger: TCCCACCCTCCCTGAGCACAAGTACCCGTCGCTGCA...TTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAACAGAAGTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS-3UTR CAA 90 bp | TTAATTTTGCACAGTTTCCTACTACATAAAATAGGAAACCCTGCAAAGCGATGCAGACGAGGGCCGGGGTaGTACGGCAAAATAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LILHSFLLHKIGNPAKRCRRGPG*YGKIGL Trigger: GAGGCCTATTTTGCCGTACAACCCCGGCCCTCGTCT...GCATCGCTTTGCAGGGTTTCCTATTTTATGTAGTAGGAAACTGTGCAAAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTTAGAGGAGTTCAGACTCACACATTTTATTTCCACAAATTAGCAGCTGTGTTCTTCTCGCCGCCGTaGAAGAGCTCCGGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFRGVQTHTFYFHKLAAVFFSPP*KSSGLF Trigger: GAACAAGCCGGAGCTCTTCAACGGCGGCGAGAAGAA...CACAGCTGCTAATTTGTGGAAATAAAATGTGTGAGTCTGAACTCCTCTAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS GCA 72 bp | GACAGGTGGCCCAGGCCGTGCATGTGCGGGTGCGGATaGGCCGAGCCGCCCAAGAGCCCGCCGCCCGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DRWPRPCMCGCG*AEPPKSPPPGP Trigger: CGGCCCGGGCGGCGGGCTCTTGGGCGGCTCGGCGCATCCGCACCCGCACATGCACGGCCTGGGCCACCTGTC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS GCA 72 bp | GGGTGCGACAGGTGGCCCAGGCCGTGCATGTGCGGGTaGGGATGCGCCGAGCCGCCCAAGAGCCCGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GCDRWPRPCMCG*GCAEPPKSPPP Trigger: GGGCGGCGGGCTCTTGGGCGGCTCGGCGCATCCGCACCCGCACATGCACGGCCTGGGCCACCTGTCGCACCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS GCA 72 bp | GCCGCGGGGTGCGACAGGTGGCCCAGGCCGTGCATGTaGGGGTGCGGATGCGCCGAGCCGCCCAAGAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AAGCDRWPRPCM*GCGCAEPPKSP Trigger: CGGGCTCTTGGGCGGCTCGGCGCATCCGCACCCGCACATGCACGGCCTGGGCCACCTGTCGCACCCCGCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS CAA 90 bp | GCCTCGGCCCGCGCCAGCAGCGTCTCGTCCAGGCTGGCGAAGAGGTaGCTCTGCAGCGGCGGCGTGGGCAGGCAGGCCCGCCGGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASARASSVSSRLAKR*LCSGGVGRQARRMA Trigger: GGCCATCCGGCGGGCCTGCCTGCCCACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCCTGGACGAGACGCTGCTGGCGCGGGCCGAGGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS CCA 72 bp | CCAGGCTGGCGAAGAGGTTGCTCTGCAGCGGCGGCGTaGGCAGGCAGGCCCGCCGGATGGCCTCGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGWRRGCSAAAA*AGRPAGWPRSW Trigger: CCAGCTCCGAGGCCATCCGGCGGGCCTGCCTGCCCACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCCTGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS CCA 72 bp | GCGCCTCGGCCCGCGCCAGCAGCGTCTCGTCCAGGCTaGCGAAGAGGTTGCTCTGCAGCGGCGGCGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: APRPAPAASRPG*RRGCSAAAAWA Trigger: TGCCCACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCCTGGACGAGACGCTGCTGGCGCGGGCCGAGGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS CCA 72 bp | ATGTTCATGGCCGCCGCCGCCGCGGGGTGCGACAGGTaGCCCAGGCCGTGCATGTGCGGGTGCGGATGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: MFMAAAAAGCDR*PRPCMCGCGCA Trigger: GGCGCATCCGCACCCGCACATGCACGGCCTGGGCCACCTGTCGCACCCCGCGGCGGCGGCGGCCATGAACAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS GCA 72 bp | AGCAGCGTCTCGTCCAGGCTGGCGAAGAGGTTGCTCTaGAGCGGCGGCGTGGGCAGGCAGGCCCGCCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSVSSRLAKRLL*SGGVGRQARRM Trigger: CATCCGGCGGGCCTGCCTGCCCACGCCGCCGCTGCAGAGCAACCTCTTCGCCAGCCTGGACGAGACGCTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS CCA 72 bp | TCTGCAGCGGCGGCGTGGGCAGGCAGGCCCGCCGGATaGCCTCGGAGCTGGAGTGCAGCGACGGGTACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SAAAAWAGRPAG*PRSWSAATGTC Trigger: ACAAGTACCCGTCGCTGCACTCCAGCTCCGAGGCCATCCGGCGGGCCTGCCTGCCCACGCCGCCGCTGCAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
||
| CDS CCA 72 bp | GGCTCGAGCGCCTGGTGGTGGTGGTGGTGGTGGTGGTaGTGCGCCAGCGGCACGGTGGACGTGGACGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSSAWWWWWWWW*CASGTVDVDVQ Trigger: CTGCACGTCCACGTCCACCGTGCCGCTGGCGCACCACCACCACCACCACCACCACCACCAGGCGCTCGAGCC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 72 bp | TGGTCCAGCAGGTCACCGGGCTCGAGCGCCTGGTGGTaGTGGTGGTGGTGGTGGTGGTGCGCCAGCGGCACG | + |
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Preference number: 6 (lower is better) Translates to: WSSRSPGSSAWW*WWWWWWCASGT Trigger: CGTGCCGCTGGCGCACCACCACCACCACCACCACCACCACCAGGCGCTCGAGCCCGGTGACCTGCTGGACCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS GCA 72 bp | GGCAGGCAGGCCCGCCGGATGGCCTCGGAGCTGGAGTaGAGCGACGGGTACTTGTGCTCAGGGAGGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GRQARRMASELE*SDGYLCSGRVG Trigger: TCCCACCCTCCCTGAGCACAAGTACCCGTCGCTGCACTCCAGCTCCGAGGCCATCCGGCGGGCCTGCCTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 72 bp | ATGTGGTCCAGCAGGTCACCGGGCTCGAGCGCCTGGTaGTGGTGGTGGTGGTGGTGGTGGTGCGCCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: MWSSRSPGSSAW*WWWWWWWCASG Trigger: GCCGCTGGCGCACCACCACCACCACCACCACCACCACCAGGCGCTCGAGCCCGGTGACCTGCTGGACCACAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 72 bp | GAGATGTGGTCCAGCAGGTCACCGGGCTCGAGCGCCTaGTGGTGGTGGTGGTGGTGGTGGTGGTGCGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: EMWSSRSPGSSA*WWWWWWWWCAS Trigger: GCTGGCGCACCACCACCACCACCACCACCACCACCAGGCGCTCGAGCCCGGTGACCTGCTGGACCACATCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS GCA 72 bp | GGTGGTGGTGCGCCAGCGGCACGGTGGACGTGGACGTaGAGGGCACGCTATTCATCGTGTGGTACGTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: GGGAPAARWTWT*RARYSSCGTWR Trigger: ACGCCACGTACCACACGATGAATAGCGTGCCCTGCACGTCCACGTCCACCGTGCCGCTGGCGCACCACCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 72 bp | TGGAGTGCAGCGACGGGTACTTGTGCTCAGGGAGGGTaGGATGCATGGCAAAGTGAGGCTGCTTGCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: WSAATGTCAQGG*DAWQSEAACCS Trigger: TGAACAGCAAGCAGCCTCACTTTGCCATGCATCCCACCCTCCCTGAGCACAAGTACCCGTCGCTGCACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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| CDS CCA 72 bp | GCGACGGGTACTTGTGCTCAGGGAGGGTGGGATGCATaGCAAAGTGAGGCTGCTTGCTGTTCATGGACATCA | + |
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Preference number: 6 (lower is better) Translates to: ATGTCAQGGWDA*QSEAACCSWTS Trigger: TGATGTCCATGAACAGCAAGCAGCCTCACTTTGCCATGCATCCCACCCTCCCTGAGCACAAGTACCCGTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053016.10 |
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