Pregenerated sensors for POU3F4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056854Ensembl transcript IDs: ENSMUST00000078229.5
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTGTGTGCGCGCGCGCGCGCGCGCGCGTGCGTGCGTGTTTGCCTaGGCGCGCGCGCGTGTGTGTGTTTCTTTTCTTAACATAAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: VCVRARARARACVFA*ARARVCVSFLNISH Trigger: ATGACTTATGTTAAGAAAAGAAACACACACACGCGCGCGCGCTCAGGCAAACACGCACGCACGCGCGCGCGCGCGCGCGCGCACACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR TCA 90 bp | AGAGCGTTTCTCACCCTGAGAGCGAGCGGCGAACTGGAGGTGAACTaGACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: RAFLTLRASGELEVN*TGRRWPNRAPESLG Trigger: ACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGTTCAGTTCACCTCCAGTTCGCCGCTCGCTCTCAGGGTGAGAAACGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR TCA 90 bp | TGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTaGCTTTTGCCAATTATTTTATTGTCTCTCCGCACGAAGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: CTRGRRWCAAGPESS*LLPIILLSLRTKLK Trigger: CTTCAGCTTCGTGCGGAGAGACAATAAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR CCA 90 bp | TACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTaGACCAGAATCTTCGTGACTTTTGCCAATTATTTTATTGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: YSDLGMYKREEVVCG*TRIFVTFANYFIVS Trigger: AGAGACAATAAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTCAGCACTGCTCCCAGTaGAGCGGGCCACCTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: QALASSLDLRLGLPPAVLQHCSQ*SGPPPC Trigger: GCAAGGAGGTGGCCCGCTGCACTGGGAGCAGTGCTG...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTAGGGAGGAGGTGGTGTaGGGCTGGACCAGAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: QALASSLDLRLGLPPAVLREEVV*GWTRIF Trigger: GAAGATTCTGGTCCAGCCGCACACCACCTCCTCCCT...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR TCA 90 bp | GAGCTTACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGAGCGGCGAACTGGAGGTaGACTGAACTGGGAGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: ELTQTLVCTRGRRWCAAGAANWR*TELGGA Trigger: AGCGCCTCCCAGTTCAGTTCACCTCCAGTTCGCCGC...TCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGTAAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTGGCTCCACAGTTCCGTaGAAGTCGGGGGAGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: EEVVCGWTRIFVTFANYFGSTVP*KSGEGA Trigger: TGCCCCCTCCCCCGACTTTCACGGAACTGTGGAGCC...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTTCAGTTTGCTTGTTCTaGCCATATAGGCACTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: QALASSLDLRLGLPPAVLSVCLF*PYRHSV Trigger: AACTGAGTGCCTATATGGGCAGAACAAGCAAACTGA...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTGAACTGGAGGTGAACTaGACTGGGAGGCGCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: EEVVCGWTRIFVTFANYFELEVN*TGRRWP Trigger: GGGCCAGCGCCTCCCAGTTCAGTTCACCTCCAGTTC...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGACCAGAACATTCACGACCTTGGTaGATTCAGAATCCTTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: TQTLVCTRGRRWCAAGPEHSRPW*IQNPSG Trigger: ACCTGAAGGATTCTGAATTCACCAAGGTCGTGAATG...TTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGATCAGCAGAAAAAGGTTaGAGGGAAATTGTCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: ELTQTLVCTRGRRWCAAGSAEKG*REIVLA Trigger: TGCCAGGACAATTTCCCTCCAACCTTTTTCTGCTGA...TCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGTAAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTTGGGAGTGCAGGAGGTaGGCATTTTTCTCTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: EEVVCGWTRIFVTFANYFWECRR*AFFSLL Trigger: GAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCA...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTCACCTGAAATACAGCTaGTATAACCAAGGCGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: EEVVCGWTRIFVTFANYFHLKYS*YNQGAE Trigger: TTCAGCGCCTTGGTTATAGCAGCTGTATTTCAGGTG...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTCAAACCTATTCAGTTTaGTTGTTCTGCCCATATAGG | + |
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Preference number: 2 (lower is better) Translates to: EEVVCGWTRIFVTFANYFQTYSV*LFCPYR Trigger: CCTATATGGGCAGAACAAGCAAACTGAATAGGTTTG...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR TCA 72 bp | CTCACCCTGAGAGCGAGCGGCGAACTGGAGGTGAACTaGACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LTLRASGELEVN*TGRRWPNRAPE Trigger: CTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGTTCAGTTCACCTCCAGTTCGCCGCTCGCTCTCAGGGTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGACCAGAACGCGTGCGTGCGTGTTaGCCTGAGCGCGCGCGCGTG | + |
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Preference number: 3 (lower is better) Translates to: TQTLVCTRGRRWCAAGPERVRAC*PERARV Trigger: CACGCGCGCGCGCTCAGGCAAACACGCACGCACGCG...TTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTCCGTTACCCAGCTCCTaGCCCTTCTTAGAGAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: TGRRWPNRAPESLGSGLLPLPSS*PFLERS Trigger: GCTCCTCTCTAAGAAGGGCAAGGAGCTGGGTAACGG...AAGGAGACCACTACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR TCA 72 bp | TTCAGGTCGCTCACATCCCATTCTTCGCGCCACAGCTaGATCCTTCTGGGGCACCGGGATCTGTGCTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: FRSLTSHSSRHS*ILLGHRDLCCG Trigger: TCCACAGCACAGATCCCGGTGCCCCAGAAGGATTCAGCTGTGGCGCGAAGAATGGGATGTGAGCGACCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR CCA 72 bp | CAGCTGAATCCTTCTGGGGCACCGGGATCTGTGCTGTaGAAGCCTTCCAGGGCTCCACAGTTCCGTGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: QLNPSGAPGSVL*KPSRAPQFRES Trigger: ACTTTCACGGAACTGTGGAGCCCTGGAAGGCTTCCACAGCACAGATCCCGGTGCCCCAGAAGGATTCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTAAGGTTGGAGGGAAATaGTCCTGGCAGCAGGGAATA | + |
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Preference number: 3 (lower is better) Translates to: TGRRWPNRAPESLGSGLLKVGGK*SWQQGI Trigger: TATTCCCTGCTGCCAGGACAATTTCCCTCCAACCTT...AAGGAGACCACTACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR TCA 72 bp | GGGAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTaGCTTTTGCCAATTATTTTATTGTCTCTCCGCACG | + |
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Preference number: 3 (lower is better) Translates to: GRRWCAAGPESS*LLPIILLSLRT Trigger: CGTGCGGAGAGACAATAAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR TCA 72 bp | AATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTTaGAAGCCACCATTTGTGAAGGCCAAGTCTTTCATC | + |
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Preference number: 3 (lower is better) Translates to: NRAPESLGSGLL*KPPFVKAKSFI Trigger: GATGAAAGACTTGGCCTTCACAAATGGTGGCTTTCAAAGGAGACCACTACCCAAAGACTCTGGCGCCCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR CCA 72 bp | CTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTaGACCAGAATCTTCGTGACTTTTGCCAATTATTTT | + |
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Preference number: 3 (lower is better) Translates to: LGMYKREEVVCG*TRIFVTFANYF Trigger: AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR TCA 72 bp | CTTTGGGTAGTGGTCTCCTTTGAAAGCCACCATTTGTaGAGGCCAAGTCTTTCATCTAGGAGAGTGTACATA | + |
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Preference number: 3 (lower is better) Translates to: LWVVVSFESHHL*RPSLSSRRVYI Trigger: TATGTACACTCTCCTAGATGAAAGACTTGGCCTTCACAAATGGTGGCTTTCAAAGGAGACCACTACCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR-3UTR CAA 90 bp | AAAAAGCAGCGAAATAGCCTTCAGGCTACTTTGCAAACCTATTCAGTTTGCTTGAATTGTGTTTCAGAGTaGAGAAGCCTGAATGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: KKQRNSLQATLQTYSVCLNCVSE*RSLNVC Trigger: ACACACATTCAGGCTTCTCAACTCTGAAACACAATT...CAAGCAAACTGAATAGGTTTGCAAAGTAGCCTGAAGGCTATTTCGCTGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTGAGCCCAGCTCACCATaGTCTGGAGGCTCCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QALASSLDLRLGLPPAVLEPSSP*SGGSRS Trigger: GCTCCGGGAGCCTCCAGACCATGGTGAGCTGGGCTC...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTTGGTCCTGGCAGTGGTaGGAGCCCAGCTCACCATGG | + |
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Preference number: 4 (lower is better) Translates to: QALASSLDLRLGLPPAVLWSWQW*EPSSPW Trigger: CCATGGTGAGCTGGGCTCGCACCACTGCCAGGACCA...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | ACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTGGCTGGTGGCCAATGTaGAGGACCACGGGCCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: TGRRWPNRAPESLGSGLLGWWPM*RTTGPR Trigger: ACGGGGGCCCGTGGTCCTCCACATTGGCCACCAGCC...AAGGAGACCACTACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR CAA 72 bp | CCGCCCAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTaGGGCTTCCACCAGCTGTGCTTGTCAAAGACACTG | + |
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Preference number: 4 (lower is better) Translates to: PPRRSLARSICA*GFHQLCLSKTL Trigger: CAGTGTCTTTGACAAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTGGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTTCCCGGAGCACTGGATaGAGGCTCTGTGTGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QALASSLDLRLGLPPAVLSRSTG*RLCVEA Trigger: TGCCTCCACACAGAGCCTGCATCCAGTGCTCCGGGA...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR TCA 90 bp | ACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTGCTGCGAGTACACATTaGGGGGTTGGCCGCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: TGRRWPNRAPESLGSGLLAASTH*GVGRWT Trigger: CGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGC...AAGGAGACCACTACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR TCA 90 bp | ACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTGCATACCGCTCACGGTaGAGCCTGGCTGCGAGTACA | + |
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Preference number: 4 (lower is better) Translates to: TGRRWPNRAPESLGSGLLAYRSR*SLAAST Trigger: TGTACTCGCAGCCAGGCTTCACCGTGAGCGGTATGC...AAGGAGACCACTACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | ACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTAGCGAGGAGATCTCCTaGGCTGCAGGCTTGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: TGRRWPNRAPESLGSGLLSEEIS*AAGLGH Trigger: GTGTCCCAAGCCTGCAGCGCAGGAGATCTCCTCGCT...AAGGAGACCACTACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTGCTCACGGTGAAGCCTaGCTGCGAGTACACATTGAG | + |
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Preference number: 4 (lower is better) Translates to: QALASSLDLRLGLPPAVLAHGEA*LRVHIE Trigger: CTCAATGTGTACTCGCAGCCAGGCTTCACCGTGAGC...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | ACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTGATGCAGGCTCTGTGTaGAGGCAGCAGCTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TGRRWPNRAPESLGSGLLDAGSV*RQQLVV Trigger: CACCACCAGCTGCTGCCTCCACACAGAGCCTGCATC...AAGGAGACCACTACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTCGATCTTGTCAATGCTaGTCGGGCTTCCTGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: QALASSLDLRLGLPPAVLRSCQC*SGFLWM Trigger: CATCCACAGGAAGCCCGACCAGCATTGACAAGATCG...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | GAGCTTACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGAGACTTCCCTGCTGCATaGCCGCGGAGTCCGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: ELTQTLVCTRGRRWCAAGDFPAA*PRSPHG Trigger: TCCATGCGGACTCCGCGGGCATGCAGCAGGGAAGTC...TCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGTAAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | ACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGACCAGAACCCCAGGCGTTCGGATaGTTAGTGTGCGGCGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TQTLVCTRGRRWCAAGPEPQAFG*LVCGEW Trigger: CCACTCGCCGCACACTAACCATCCGAACGCCTGGGG...TTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | GAGCTTACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGAGAGTGGTCCTGGCAGTaGTGCGAGCCCAGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: ELTQTLVCTRGRRWCAAGEWSWQ*CEPSSP Trigger: TGGTGAGCTGGGCTCGCACCACTGCCAGGACCACTC...TCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGTAAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR TCA 90 bp | CAGGCGCTCGCTAGCTCGCTCGATCTGCGCCTTGGGCTTCCACCAGCTGTGCTTCTTTGGAGAAGTTTCTaGGGATTGCGGAAAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: QALASSLDLRLGLPPAVLLWRSF*GLRKGL Trigger: AAGTCCTTTCCGCAATCCTCAGAAACTTCTCCAAAG...AAGCACAGCTGGTGGAAGCCCAAGGCGCAGATCGAGCGAGCTAGCGAGCGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR TCA 90 bp | CTCCTCAAGTGTGGGAGTGCAGGAGGTGAGCATTTTTCTCTCTCCTCCTTTCAGAGACTGGTCACCCAGTaGTGCCCGAGGGGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLKCGSAGGEHFSLSSFQRLVTQ*CPRGCP Trigger: TGGGCATCCCCTCGGGCATCACTGGGTGACCAGTCT...CTGAAAGGAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCACACTTGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | CTCCTCAAGTGTGGGAGTGCAGGAGGTGAGCATTTTTCTCTCTCCTCCTTTCAGTTAGTGTGCGGCGAGTaGTGGGCTACGTGCGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LLKCGSAGGEHFSLSSFQLVCGE*WATCGE Trigger: CTCGCCGCACGTAGCCCACCACTCGCCGCACACTAA...CTGAAAGGAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCACACTTGAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | GAGCTTACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGAACGGTGAAGCCTGGCTaGGAGTACACATTGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ELTQTLVCTRGRRWCAAGTVKPG*EYTLRG Trigger: ACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGT...TCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGTAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | ACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGACCAGAATGGAGGTTCGCTTCTTaGGTTTGCGGCCTTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TQTLVCTRGRRWCAAGPEWRFAS*VCGLEQ Trigger: CTGCTCAAGGCCGCAAACGCAAGAAGCGAACCTCCA...TTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTGGTCCAGGGGGCTGGTaGCCAATGTGGAGGACCACG | + |
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Preference number: 4 (lower is better) Translates to: EEVVCGWTRIFVTFANYFGPGGW*PMWRTT Trigger: CGTGGTCCTCCACATTGGCCACCAGCCCCCTGGACC...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTGCTGGTCCAGGGGGCTaGTGGCCAATGTGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: EEVVCGWTRIFVTFANYFAGPGG*WPMWRT Trigger: GGTCCTCCACATTGGCCACCAGCCCCCTGGACCAGC...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | ACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGACCAGAATGGTCGGGCTTCCTGTaGATGAATCAGCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQTLVCTRGRRWCAAGPEWSGFL*MNQPPP Trigger: TGGAGGAGGCTGATTCATCCACAGGAAGCCCGACCA...TTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | CTCCTCAAGTGTGGGAGTGCAGGAGGTGAGCATTTTTCTCTCTCCTCCTTTCAGCGAGGGGATGCCCATTaGTGGGAACTCCCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKCGSAGGEHFSLSSFQRGDAH*WELPAS Trigger: ACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCG...CTGAAAGGAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCACACTTGAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTGGAGTGAGTCCCCCGTaGTCCAGCATACCGCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: EEVVCGWTRIFVTFANYFGVSPP*SSIPLT Trigger: CGTGAGCGGTATGCTGGAGCACGGGGGACTCACTCC...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTTCAGAGTTGAGAAGCCTGAATGTGTGTGTGTATGTGTGTGTGTGTGTGCCCGGCTTCACGTCTTaGTGGTCCAGGGGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVSELRSLNVCVYVCVCVPGFTS*WSRGLV Trigger: CACCAGCCCCCTGGACCAGCAAGACGTGAAGCCGGG...CACACACACACACACATACACACACACATTCAGGCTTCTCAACTCTGAAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | TGTGTTTCAGAGTTGAGAAGCCTGAATGTGTGTGTGTATGTGTGTGTGTGTGTGGGAGGCAGCAGCTGGTaGTGGAGTGAGTCCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVSELRSLNVCVYVCVCVGGSSW*WSESPV Trigger: CACGGGGGACTCACTCCACCACCAGCTGCTGCCTCC...CACACACACACACACATACACACACACATTCAGGCTTCTCAACTCTGAAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR TCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTGCGAGCGGTGATGGATaGTTGCGCCCAGTTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EEVVCGWTRIFVTFANYFASGDG*LRPVAD Trigger: ATCTGCAACTGGGCGCAATCATCCATCACCGCTCGC...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR TCA 90 bp | GAGCTTACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGACAGGCTTGGGACACTTaGGGAAATGTGTTTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ELTQTLVCTRGRRWCAAGQAWDT*GNVFPV Trigger: TACTGGAAACACATTTCCTCAAGTGTCCCAAGCCTG...TCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGTAAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTTCAGAGTTGAGAAGCCTGAATGTGTGTGTGTATGTGTGTGTGTGTGTGCGGAAAGGACTTCCCTaGTGCATGCCCGCGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVSELRSLNVCVYVCVCVRKGLP*CMPAES Trigger: GGACTCCGCGGGCATGCAGCAGGGAAGTCCTTTCCG...CACACACACACACACATACACACACACATTCAGGCTTCTCAACTCTGAAACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | CTCCTCAAGTGTGGGAGTGCAGGAGGTGAGCATTTTTCTCTCTCCTCCTTTCAGGCGGTGATGGATGATTaGGCCCAGTTGCAGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKCGSAGGEHFSLSSFQAVMDD*AQLQIF Trigger: GAAGATCTGCAACTGGGCGCAATCATCCATCACCGC...CTGAAAGGAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCACACTTGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTTTCGGATGGTTAGTGTaGGGCGAGTGGTGGGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: EEVVCGWTRIFVTFANYFFGWLV*GEWWAT Trigger: CGTAGCCCACCACTCGCCGCACACTAACCATCCGAA...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTCGAATAAACCTCGTGTaGCTGCTGATCCCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EEVVCGWTRIFVTFANYFRINLV*LLIPWR Trigger: CCGCCAGGGGATCAGCAGCCACACGAGGTTTATTCG...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTCAGAGTTGAGAAGCCTGAATGTGTGTGTGTATGTGTGTGTGTGTGTGACCTCGTGTGGCTGCTaGTCCCCTGGCGGAGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: CVSELRSLNVCVYVCVCVTSCGC*SPGGVI Trigger: AATGACTCCGCCAGGGGATCAGCAGCCACACGAGGT...CACACACACACACACATACACACACACATTCAGGCTTCTCAACTCTGAAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTGGGGATGCCCATTGCTaGGAACTCCCTGCAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EEVVCGWTRIFVTFANYFGDAHC*ELPASS Trigger: ACTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCC...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | AAAAAGCAGCGAAATAGCCTTCAGGCTACTTTGCAAACCTATTCAGTTTGCTTGAAAGGACTTCCCTGCTaGATGCCCGCGGAGTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKQRNSLQATLQTYSVCLKGLPC*MPAESA Trigger: TGCGGACTCCGCGGGCATGCAGCAGGGAAGTCCTTT...CAAGCAAACTGAATAGGTTTGCAAAGTAGCCTGAAGGCTATTTCGCTGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTTCAGAGTTGAGAAGCCTGAATGTGTGTGTGTATGTGTGTGTGTGTGTGCAACTGGAGACTGTCTaGCAGCGAGGAGATCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVSELRSLNVCVYVCVCVQLETV*QRGDLL Trigger: CAGGAGATCTCCTCGCTGGCAGACAGTCTCCAGTTG...CACACACACACACACATACACACACACATTCAGGCTTCTCAACTCTGAAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | AAAAAGCAGCGAAATAGCCTTCAGGCTACTTTGCAAACCTATTCAGTTTGCTTGAGGCTCCCGGAGCACTaGATGCAGGCTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKQRNSLQATLQTYSVCLRLPEH*MQALCG Trigger: TCCACACAGAGCCTGCATCCAGTGCTCCGGGAGCCT...CAAGCAAACTGAATAGGTTTGCAAAGTAGCCTGAAGGCTATTTCGCTGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| 3UTR CAA 72 bp | AAAGGATGTAATGCTGAAAGGAAGGTAAAGAGAGAATaGTATCAGCACTGCTCCCAGTGCAGCGGGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KGCNAERKVKRE*YQHCSQCSGPP Trigger: AGGTGGCCCGCTGCACTGGGAGCAGTGCTGATACAATTCTCTCTTTACCTTCCTTTCAGCATTACATCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR GCA 90 bp | AAAAAGCAGCGAAATAGCCTTCAGGCTACTTTGCAAACCTATTCAGTTTGCTTGCAGCGATCTTGTCAATaGTGGTCGGGCTTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKQRNSLQATLQTYSVCLQRSCQ*WSGFLW Trigger: CCACAGGAAGCCCGACCAGCATTGACAAGATCGCTG...CAAGCAAACTGAATAGGTTTGCAAAGTAGCCTGAAGGCTATTTCGCTGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | AAAAAGCAGCGAAATAGCCTTCAGGCTACTTTGCAAACCTATTCAGTTTGCTTGGTCTCTTCATCAGAGTaGTCCTGGCAGTGGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KKQRNSLQATLQTYSVCLVSSSE*SWQWCE Trigger: CTCGCACCACTGCCAGGACCACTCTGATGAAGAGAC...CAAGCAAACTGAATAGGTTTGCAAAGTAGCCTGAAGGCTATTTCGCTGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CCA 90 bp | TGTGTTTCAGAGTTGAGAAGCCTGAATGTGTGTGTGTATGTGTGTGTGTGTGTGCAACTCATCAGAGGTTaGAGTCTCTTCATCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVSELRSLNVCVYVCVCVQLIRG*SLFIRV Trigger: CACTCTGATGAAGAGACTCCAACCTCTGATGAGTTG...CACACACACACACACATACACACACACATTCAGGCTTCTCAACTCTGAAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 90 bp | ATTGCGCCCAGTTGCAGATCTTCGCGTCCCGGCTTCACGTCTTGCTaGTCCAGGGGGCTGGTGGCCAATGTGGAGGACCACGGGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: IAPSCRSSRPGFTSC*SRGLVANVEDHGPP Trigger: CGGGGGCCCGTGGTCCTCCACATTGGCCACCAGCCCCCTGGACCAGCAAGACGTGAAGCCGGGACGCGAAGATCTGCAACTGGGCGCAAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 90 bp | TGCGAGCCCAGCTCACCATGGTCTGGAGGCTCCCGGAGCACTGGATaGAGGCTCTGTGTGGAGGCAGCAGCTGGTGGTGGAGTGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CEPSSPWSGGSRSTG*RLCVEAAAGGGVSP Trigger: GGGACTCACTCCACCACCAGCTGCTGCCTCCACACAGAGCCTGCATCCAGTGCTCCGGGAGCCTCCAGACCATGGTGAGCTGGGCTCGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 90 bp | ATGATTGCGCCCAGTTGCAGATCTTCGCGTCCCGGCTTCACGTCTTaGTGGTCCAGGGGGCTGGTGGCCAATGTGGAGGACCACGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MIAPSCRSSRPGFTS*WSRGLVANVEDHGP Trigger: GGGCCCGTGGTCCTCCACATTGGCCACCAGCCCCCTGGACCAGCAAGACGTGAAGCCGGGACGCGAAGATCTGCAACTGGGCGCAATCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 90 bp | GTGCGGCGAGTGGTGGGCTACGTGCGGCGAGCGGTGATGGATGATTaGGCCCAGTTGCAGATCTTCGCGTCCCGGCTTCACGTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRRVVGYVRRAVMDD*AQLQIFASRLHVLL Trigger: CAGCAAGACGTGAAGCCGGGACGCGAAGATCTGCAACTGGGCGCAATCATCCATCACCGCTCGCCGCACGTAGCCCACCACTCGCCGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 90 bp | ATCAGAGTGGTCCTGGCAGTGGTGCGAGCCCAGCTCACCATGGTCTaGAGGCTCCCGGAGCACTGGATGCAGGCTCTGTGTGGAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IRVVLAVVRAQLTMV*RLPEHWMQALCGGS Trigger: GCTGCCTCCACACAGAGCCTGCATCCAGTGCTCCGGGAGCCTCCAGACCATGGTGAGCTGGGCTCGCACCACTGCCAGGACCACTCTGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS TCA 90 bp | GGATGGTTAGTGTGCGGCGAGTGGTGGGCTACGTGCGGCGAGCGGTaGTGGATGATTGCGCCCAGTTGCAGATCTTCGCGTCCCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GWLVCGEWWATCGER*WMIAPSCRSSRPGF Trigger: GAAGCCGGGACGCGAAGATCTGCAACTGGGCGCAATCATCCATCACCGCTCGCCGCACGTAGCCCACCACTCGCCGCACACTAACCATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 90 bp | GTGAGTCCCCCGTGCTCCAGCATACCGCTCACGGTGAAGCCTGGCTaGGAGTACACATTGAGGGGTTGGCCGCTGGACGTGATGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSPPCSSIPLTVKPG*EYTLRGWPLDVMDE Trigger: CTCGTCCATCACGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGTGAGCGGTATGCTGGAGCACGGGGGACTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 90 bp | CGAGTACACATTGAGGGGTTGGCCGCTGGACGTGATGGACGAGTTTaGAGCAGGGCTCGCTCCCCAGGCGTTCGGATGGTTAGTGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVHIEGLAAGRDGRV*SRARSPGVRMVSVR Trigger: CCGCACACTAACCATCCGAACGCCTGGGGAGCGAGCCCTGCTCCAAACTCGTCCATCACGTCCAGCGGCCAACCCCTCAATGTGTACTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 90 bp | ATACCGCTCACGGTGAAGCCTGGCTGCGAGTACACATTGAGGGGTTaGCCGCTGGACGTGATGGACGAGTTTGGAGCAGGGCTCGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IPLTVKPGCEYTLRG*PLDVMDEFGAGLAP Trigger: GGGAGCGAGCCCTGCTCCAAACTCGTCCATCACGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGTGAGCGGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 90 bp | TGGAGTGAGTCCCCCGTGCTCCAGCATACCGCTCACGGTGAAGCCTaGCTGCGAGTACACATTGAGGGGTTGGCCGCTGGACGTGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: WSESPVLQHTAHGEA*LRVHIEGLAAGRDG Trigger: TCCATCACGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGTGAGCGGTATGCTGGAGCACGGGGGACTCACTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CAA 90 bp | ACTGGGAGGCGCTGGCCCAATAGGGCGCCAGAGTCTTTGGGTAGTGGTCTCCTTCCGAGGGGATGCCCATaGCTGGGAACTCCCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGRRWPNRAPESLGSGLLPRGCP*LGTPCK Trigger: CTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGG...AAGGAGACCACTACCCAAAGACTCTGGCGCCCTATTGGGCCAGCGCCTCCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 90 bp | TCATCAGAGGTTGGAGTCTCTTCATCAGAGTGGTCCTGGCAGTGGTaGGAGCCCAGCTCACCATGGTCTGGAGGCTCCCGGAGCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSEVGVSSSEWSWQW*EPSSPWSGGSRSTG Trigger: TCCAGTGCTCCGGGAGCCTCCAGACCATGGTGAGCTGGGCTCGCACCACTGCCAGGACCACTCTGATGAAGAGACTCCAACCTCTGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 90 bp | AACTCATCAGAGGTTGGAGTCTCTTCATCAGAGTGGTCCTGGCAGTaGTGCGAGCCCAGCTCACCATGGTCTGGAGGCTCCCGGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NSSEVGVSSSEWSWQ*CEPSSPWSGGSRST Trigger: AGTGCTCCGGGAGCCTCCAGACCATGGTGAGCTGGGCTCGCACCACTGCCAGGACCACTCTGATGAAGAGACTCCAACCTCTGATGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CAA 90 bp | ACTCAGACCTTGGTATGTACAAGAGGGAGGAGGTGGTGTGCGGCTGGACCAGAAGGCTGCGAGTACACATaGAGGGGTTGGCCGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TQTLVCTRGRRWCAAGPEGCEYT*RGWPLD Trigger: GTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCC...TTCTGGTCCAGCCGCACACCACCTCCTCCCTCTTGTACATACCAAGGTCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 90 bp | GCGAACTGTTCCAACTCATCAGAGGTTGGAGTCTCTTCATCAGAGTaGTCCTGGCAGTGGTGCGAGCCCAGCTCACCATGGTCTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ANCSNSSEVGVSSSE*SWQWCEPSSPWSGG Trigger: GCCTCCAGACCATGGTGAGCTGGGCTCGCACCACTGCCAGGACCACTCTGATGAAGAGACTCCAACCTCTGATGAGTTGGAACAGTTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCAAGTGTGGGAGTGCAGGAGGTGAGCATTTTTCTCTCTCCTCCTTTCAGGCAGGCTTGGGACACTaGAGGAAATGTGTTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLKCGSAGGEHFSLSSFQAGLGH*RKCVSS Trigger: ACTGGAAACACATTTCCTCAAGTGTCCCAAGCCTGC...CTGAAAGGAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCACACTTGAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCAAGTGTGGGAGTGCAGGAGGTGAGCATTTTTCTCTCTCCTCCTTTCAGCCAACTCATCAGAGGTaGGAGTCTCTTCATCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLKCGSAGGEHFSLSSFQPTHQR*ESLHQS Trigger: ACTCTGATGAAGAGACTCCAACCTCTGATGAGTTGG...CTGAAAGGAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCACACTTGAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCAAGTGTGGGAGTGCAGGAGGTGAGCATTTTTCTCTCTCCTCCTTTCAGCTGCAAGTAGTCACTTaGGAGAAGTTTCTGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LLKCGSAGGEHFSLSSFQLQVVT*EKFLRI Trigger: AATCCTCAGAAACTTCTCCAAAGTGACTACTTGCAG...CTGAAAGGAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCACACTTGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCAAGTGTGGGAGTGCAGGAGGTGAGCATTTTTCTCTCTCCTCCTTTCAGTGCGTGAAGCCCAACTaGATTCTTCTTTGTTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLKCGSAGGEHFSLSSFQCVKPN*ILLCLN Trigger: ATTCAAACAAAGAAGAATCAAGTTGGGCTTCACGCA...CTGAAAGGAGGAGAGAGAAAAATGCTCACCTCCTGCACTCCCACACTTGAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGTGGTGTGCGGCTGGACCAGAATCTTCGTGACTTTTGCCAATTATTTTCTTTGTTTGAATTGTTaGGCGAACTGTTCCAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: EEVVCGWTRIFVTFANYFLCLNC*ANCSNS Trigger: TGAGTTGGAACAGTTCGCCAAACAATTCAAACAAAG...AAAATAATTGGCAAAAGTCACGAAGATTCTGGTCCAGCCGCACACCACCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
||
| CDS CCA 72 bp | CGCGTCCCGGCTTCACGTCTTGCTGGTCCAGGGGGCTaGTGGCCAATGTGGAGGACCACGGGCCCCCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RVPASRLAGPGG*WPMWRTTGPRR Trigger: GCGACGGGGGCCCGTGGTCCTCCACATTGGCCACCAGCCCCCTGGACCAGCAAGACGTGAAGCCGGGACGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
||
| CDS TCA 72 bp | GACCACGGGCCCCCGTCGCTAAGACTGGTCACCCAGTaGTGCCCGAGGGGATGCCCATTGCTGGGAACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DHGPPSLRLVTQ*CPRGCPLLGTP Trigger: GGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGTCTTAGCGACGGGGGCCCGTGGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
||
| CDS GCA 72 bp | GTGGAGGCAGCAGCTGGTGGTGGAGTGAGTCCCCCGTaGTCCAGCATACCGCTCACGGTGAAGCCTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VEAAAGGGVSPP*SSIPLTVKPGC Trigger: GCAGCCAGGCTTCACCGTGAGCGGTATGCTGGAGCACGGGGGACTCACTCCACCACCAGCTGCTGCCTCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
||
| CDS CCA 72 bp | GAGTTTGGAGCAGGGCTCGCTCCCCAGGCGTTCGGATaGTTAGTGTGCGGCGAGTGGTGGGCTACGTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: EFGAGLAPQAFG*LVCGEWWATCG Trigger: GCCGCACGTAGCCCACCACTCGCCGCACACTAACCATCCGAACGCCTGGGGAGCGAGCCCTGCTCCAAACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
||
| CDS TCA 72 bp | GCGAGTGGTGGGCTACGTGCGGCGAGCGGTGATGGATaGTTGCGCCCAGTTGCAGATCTTCGCGTCCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASGGLRAASGDG*LRPVADLRVPA Trigger: AGCCGGGACGCGAAGATCTGCAACTGGGCGCAATCATCCATCACCGCTCGCCGCACGTAGCCCACCACTCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
||
| CDS CAA 90 bp | GTGGTGGGCTACGTGCGGCGAGCGGTGATGGATGATTGCGCCCAGTaGCAGATCTTCGCGTCCCGGCTTCACGTCTTGCTGGTCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVGYVRRAVMDDCAQ*QIFASRLHVLLVQG Trigger: CCCCTGGACCAGCAAGACGTGAAGCCGGGACGCGAAGATCTGCAACTGGGCGCAATCATCCATCACCGCTCGCCGCACGTAGCCCACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS TCA 72 bp | GTGTGCGGCGAGTGGTGGGCTACGTGCGGCGAGCGGTaGTGGATGATTGCGCCCAGTTGCAGATCTTCGCGT | + |
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Preference number: 6 (lower is better) Translates to: VCGEWWATCGER*WMIAPSCRSSR Trigger: ACGCGAAGATCTGCAACTGGGCGCAATCATCCATCACCGCTCGCCGCACGTAGCCCACCACTCGCCGCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 72 bp | CCCAGTTGCAGATCTTCGCGTCCCGGCTTCACGTCTTaGTGGTCCAGGGGGCTGGTGGCCAATGTGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PSCRSSRPGFTS*WSRGLVANVED Trigger: GTCCTCCACATTGGCCACCAGCCCCCTGGACCAGCAAGACGTGAAGCCGGGACGCGAAGATCTGCAACTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 72 bp | GTGGTGGGCTACGTGCGGCGAGCGGTGATGGATGATTaGGCCCAGTTGCAGATCTTCGCGTCCCGGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: VVGYVRRAVMDD*AQLQIFASRLH Trigger: GTGAAGCCGGGACGCGAAGATCTGCAACTGGGCGCAATCATCCATCACCGCTCGCCGCACGTAGCCCACCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 72 bp | CCGTGCTCCAGCATACCGCTCACGGTGAAGCCTGGCTaGGAGTACACATTGAGGGGTTGGCCGCTGGACGTG | + |
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Preference number: 6 (lower is better) Translates to: PCSSIPLTVKPG*EYTLRGWPLDV Trigger: CACGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGTGAGCGGTATGCTGGAGCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 72 bp | AGCTCACCATGGTCTGGAGGCTCCCGGAGCACTGGATaGAGGCTCTGTGTGGAGGCAGCAGCTGGTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SSPWSGGSRSTG*RLCVEAAAGGG Trigger: TCCACCACCAGCTGCTGCCTCCACACAGAGCCTGCATCCAGTGCTCCGGGAGCCTCCAGACCATGGTGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CAA 90 bp | CATACCGCTCACGGTGAAGCCTGGCTGCGAGTACACATTGAGGGGTaGGCCGCTGGACGTGATGGACGAGTTTGGAGCAGGGCTCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HTAHGEAWLRVHIEG*AAGRDGRVWSRARS Trigger: GGAGCGAGCCCTGCTCCAAACTCGTCCATCACGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGTGAGCGGTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 72 bp | AGTTGCAGATCTTCGCGTCCCGGCTTCACGTCTTGCTaGTCCAGGGGGCTGGTGGCCAATGTGGAGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: SCRSSRPGFTSC*SRGLVANVEDH Trigger: GTGGTCCTCCACATTGGCCACCAGCCCCCTGGACCAGCAAGACGTGAAGCCGGGACGCGAAGATCTGCAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 72 bp | ATTGAGGGGTTGGCCGCTGGACGTGATGGACGAGTTTaGAGCAGGGCTCGCTCCCCAGGCGTTCGGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: IEGLAAGRDGRV*SRARSPGVRMV Trigger: AACCATCCGAACGCCTGGGGAGCGAGCCCTGCTCCAAACTCGTCCATCACGTCCAGCGGCCAACCCCTCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 72 bp | ACGGTGAAGCCTGGCTGCGAGTACACATTGAGGGGTTaGCCGCTGGACGTGATGGACGAGTTTGGAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TVKPGCEYTLRG*PLDVMDEFGAG Trigger: CCCTGCTCCAAACTCGTCCATCACGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 72 bp | GAGGTTGGAGTCTCTTCATCAGAGTGGTCCTGGCAGTaGTGCGAGCCCAGCTCACCATGGTCTGGAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: EVGVSSSEWSWQ*CEPSSPWSGGS Trigger: GGAGCCTCCAGACCATGGTGAGCTGGGCTCGCACCACTGCCAGGACCACTCTGATGAAGAGACTCCAACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CAA 72 bp | TACGTGCGGCGAGCGGTGATGGATGATTGCGCCCAGTaGCAGATCTTCGCGTCCCGGCTTCACGTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: YVRRAVMDDCAQ*QIFASRLHVLL Trigger: CAGCAAGACGTGAAGCCGGGACGCGAAGATCTGCAACTGGGCGCAATCATCCATCACCGCTCGCCGCACGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CAA 72 bp | CACGGTGAAGCCTGGCTGCGAGTACACATTGAGGGGTaGGCCGCTGGACGTGATGGACGAGTTTGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HGEAWLRVHIEG*AAGRDGRVWSR Trigger: CCTGCTCCAAACTCGTCCATCACGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CAA 72 bp | ATACCGCTCACGGTGAAGCCTGGCTGCGAGTACACATaGAGGGGTTGGCCGCTGGACGTGATGGACGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: IPLTVKPGCEYT*RGWPLDVMDEF Trigger: AAACTCGTCCATCACGTCCAGCGGCCAACCCCTCAATGTGTACTCGCAGCCAGGCTTCACCGTGAGCGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS GCA 72 bp | GACTGGTCACCCAGTGATGCCCGAGGGGATGCCCATTaGTGGGAACTCCCTGCAAGTAGTCACTTTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: DWSPSDARGDAH*WELPASSHFGE Trigger: TTCTCCAAAGTGACTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGGCATCACTGGGTGACCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CCA 72 bp | TCCAACTCATCAGAGGTTGGAGTCTCTTCATCAGAGTaGTCCTGGCAGTGGTGCGAGCCCAGCTCACCATGG | + |
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Preference number: 6 (lower is better) Translates to: SNSSEVGVSSSE*SWQWCEPSSPW Trigger: CCATGGTGAGCTGGGCTCGCACCACTGCCAGGACCACTCTGATGAAGAGACTCCAACCTCTGATGAGTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CAA 90 bp | CCCGAGGGGATGCCCATTGCTGGGAACTCCCTGCAAGTAGTCACTTaGGAGAAGTTTCTGAGGATTGCGGAAAGGACTTCCCTGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: PEGMPIAGNSLQVVT*EKFLRIAERTSLLH Trigger: ATGCAGCAGGGAAGTCCTTTCCGCAATCCTCAGAAACTTCTCCAAAGTGACTACTTGCAGGGAGTTCCCAGCAATGGGCATCCCCTCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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| CDS CAA 72 bp | ATGCCCATTGCTGGGAACTCCCTGCAAGTAGTCACTTaGGAGAAGTTTCTGAGGATTGCGGAAAGGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: MPIAGNSLQVVT*EKFLRIAERTS Trigger: GGAAGTCCTTTCCGCAATCCTCAGAAACTTCTCCAAAGTGACTACTTGCAGGGAGTTCCCAGCAATGGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078229.5 |
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