Pregenerated sensors for POU3F3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045515

Ensembl transcript IDs: ENSMUST00000054883.4, ENSMUST00000239323.2

Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	GGGCCGTGGCACGCCTGTCTTTGGGCGGAGGGGAGGAGGCCTAGATaGCCTGGCACTGGCCAGGTGCTGGGTCTGCGCGGCGGCAGCGGC	+
Preference number: 1 (lower is better) Translates to: GPWHACLWAEGRRPR*PGTGQVLGLRGGSG Trigger: GCCGCTGCCGCCGCGCAGACCCAGCACCTGGCCAGTGCCAGGGCATCTAGGCCTCCTCCCCTCCGCCCAAAGACAGGCGTGCCACGGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 90 bp	TATGCCTCTGAAGGACCAAACCACAGAAATGGGCAGCCTGGAGTCTaGGCTAGGGACAATCTCAGCACAGAGCAAAGCAGGGCTCAGTAC	+
Preference number: 1 (lower is better) Translates to: YASEGPNHRNGQPGV*ARDNLSTEQSRAQY Trigger: GTACTGAGCCCTGCTTTGCTCTGTGCTGAGATTGTCCCTAGCGCAGACTCCAGGCTGCCCATTTCTGTGGTTTGGTCCTTCAGAGGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 90 bp	GTGGATTGCGGCTGGACGTACCTACCCTTCAGCCTCACCCAGCCTTaGCTCTTTCGCGATGCTTTTATTTCCAAGTTTACTGCGGAGGAT	+
Preference number: 1 (lower is better) Translates to: VDCGWTYLPFSLTQP*LFRDAFISKFTAED Trigger: ATCCTCCGCAGTAAACTTGGAAATAAAAGCATCGCGAAAGAGCCAAGGCTGGGTGAGGCTGAAGGGTAGGTACGTCCAGCCGCAATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 90 bp	ATAATCACATCCGCAGCACCCATTCAATCAAAGTTGGCAACGCATTaGGGGCAGAAGTCAAGGGAAGTGCGCGGTTGGTGCTGTCTTTCC	+
Preference number: 1 (lower is better) Translates to: IITSAAPIQSKLATH*GQKSREVRGWCCLS Trigger: GGAAAGACAGCACCAACCGCGCACTTCCCTTGACTTCTGCCCTCAATGCGTTGCCAACTTTGATTGAATGGGTGCTGCGGATGTGATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 90 bp	GACGACGCCATGCAGGACATCTCGGTGTGGACAGTACCTCAAGTGTaGAGTTTAGGTGCGTTAGGCATCTTCACCCTTCTTTCAAAACAG	+
Preference number: 1 (lower is better) Translates to: DDAMQDISVWTVPQV*SLGALGIFTLLSKQ Trigger: CTGTTTTGAAAGAAGGGTGAAGATGCCTAACGCACCTAAACTGCACACTTGAGGTACTGTCCACACCGAGATGTCCTGCATGGCGTCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 90 bp	GACGTACCTACCCTTCAGCCTCACCCAGCCTTGGCTCTTTCGCGATaGTTTTATTTCCAAGTTTACTGCGGAGGATGCTTTCTTTTGGCT	+
Preference number: 1 (lower is better) Translates to: DVPTLQPHPALALSR*FYFQVYCGGCFLLA Trigger: AGCCAAAAGAAAGCATCCTCCGCAGTAAACTTGGAAATAAAAGCATCGCGAAAGAGCCAAGGCTGGGTGAGGCTGAAGGGTAGGTACGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 90 bp	TTCAATCAAAGTTGGCAACGCATTGAGGGCAGAAGTCAAGGGAAGTaGGCGGTTGGTGCTGTCTTTCCACACCCTTTTATCGGAGTCAGT	+
Preference number: 1 (lower is better) Translates to: FNQSWQRIEGRSQGK*AVGAVFPHPFIGVS Trigger: ACTGACTCCGATAAAAGGGTGTGGAAAGACAGCACCAACCGCGCACTTCCCTTGACTTCTGCCCTCAATGCGTTGCCAACTTTGATTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 90 bp	GACTTGTCAGGGGAAGGTGATTGGGTAGATGGGGTGATCAAAGCTTaGATAGTGGCTCGGGAGCCACACTCTACTGTAAACTATAACTGG	+
Preference number: 1 (lower is better) Translates to: DLSGEGDWVDGVIKA*IVAREPHSTVNYNW Trigger: CCAGTTATAGTTTACAGTAGAGTGTGGCTCCCGAGCCACTATCCAAGCTTTGATCACCCCATCTACCCAATCACCTTCCCCTGACAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 90 bp	GCAGGACATCTCGGTGTGGACAGTACCTCAAGTGTGCAGTTTAGGTaGGTTAGGCATCTTCACCCTTCTTTCAAAACAGAAGCAGAACAC	+
Preference number: 1 (lower is better) Translates to: AGHLGVDSTSSVQFR*VRHLHPSFKTEAEH Trigger: GTGTTCTGCTTCTGTTTTGAAAGAAGGGTGAAGATGCCTAACGCACCTAAACTGCACACTTGAGGTACTGTCCACACCGAGATGTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 90 bp	ACCACTATTGCTAAAGCAACTCCTTTTAGCAACCCTAGCCTGTTCTaGAGGTTTCAAACATACCTTTGCGTGGGGAAGCTCCGCTCTCTT	+
Preference number: 1 (lower is better) Translates to: TTIAKATPFSNPSLF*RFQTYLCVGKLRSL Trigger: AAGAGAGCGGAGCTTCCCCACGCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGCTTTAGCAATAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 90 bp	TTTACAAACAGCCTGGCCCATTCCTCACTTTCAGGGAGGCCTTCTTaGCTTACCCTCAGAGCCTCTAAAACAACAACAACAACAACAACA	+
Preference number: 1 (lower is better) Translates to: FTNSLAHSSLSGRPS*LTLRASKTTTTTTT Trigger: TGTTGTTGTTGTTGTTGTTGTTTTAGAGGCTCTGAGGGTAAGCCAAGAAGGCCTCCCTGAAAGTGAGGAATGGGCCAGGCTGTTTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 90 bp	TTGAAAGTAGCCAAGCTGATGGACCAGAACTTTGTCACTTTCCTTTaGGTTGGAAGGGGAAGAGTAGGCAGTCTGAAATGGAGGAAACAA	+
Preference number: 1 (lower is better) Translates to: LKVAKLMDQNFVTFL*VGRGRVGSLKWRKQ Trigger: TTGTTTCCTCCATTTCAGACTGCCTACTCTTCCCCTTCCAACCCAAAGGAAAGTGACAAAGTTCTGGTCCATCAGCTTGGCTACTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 90 bp	CGCGATGCTTTTATTTCCAAGTTTACTGCGGAGGATGCTTTCTTTTaGCTTTCTTGTTCAGTCTGTGAACTTCAGAAGCGGCGAATCTTC	+
Preference number: 1 (lower is better) Translates to: RDAFISKFTAEDAFF*LSCSVCELQKRRIF Trigger: GAAGATTCGCCGCTTCTGAAGTTCACAGACTGAACAAGAAAGCCAAAAGAAAGCATCCTCCGCAGTAAACTTGGAAATAAAAGCATCGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 90 bp	AAATACACCTTGAATTATTTATTGTACAGACTTGTCAGGGGAAGGTaGTTGGGTAGATGGGGTGATCAAAGCTTGGATAGTGGCTCGGGA	+
Preference number: 1 (lower is better) Translates to: KYTLNYLLYRLVRGR*LGRWGDQSLDSGSG Trigger: TCCCGAGCCACTATCCAAGCTTTGATCACCCCATCTACCCAATCACCTTCCCCTGACAAGTCTGTACAATAAATAATTCAAGGTGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 90 bp	GCGTCAGCTTACTTTACACAACACACAATGACAAGCAAAACTGCTTaGTTTGCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCAT	+
Preference number: 1 (lower is better) Translates to: ASAYFTQHTMTSKTA*FAYLLQSKTYSATH Trigger: ATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGCAAACCAAGCAGTTTTGCTTGTCATTGTGTGTTGTGTAAAGTAAGCTGACGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 90 bp	AATCTCAGCACAGAGCAAAGCAGGGCTCAGTACCATCATCTTTCATaGAAGAAATATAGGAAGAAAAGCAAATATAGGCTTAATAATGGA	+
Preference number: 1 (lower is better) Translates to: NLSTEQSRAQYHHLS*KKYRKKSKYRLNNG Trigger: TCCATTATTAAGCCTATATTTGCTTTTCTTCCTATATTTCTTTCATGAAAGATGATGGTACTGAGCCCTGCTTTGCTCTGTGCTGAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GAATCTTTAGGCATGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTTGGTGGCGGTCTCAGAGGCTaGGCCCGGGCCCCGCTTTTG	+
Preference number: 2 (lower is better) Translates to: ESLGMVHPERQSAKPGFGGGLRG*ARAPLL Trigger: CAAAAGCGGGGCCCGGGCCCAGCCTCTGAGACCGCC...ACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCATGCCTAAAGATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGAGGCGGTCTCAGAGGCTaGGCCCGGGCCCCGCTTTTG	+
Preference number: 2 (lower is better) Translates to: TLEARKKQRESLRSMRERGGLRG*ARAPLL Trigger: CAAAAGCGGGGCCCGGGCCCAGCCTCTGAGACCGCC...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTGGGAGGAGGCCTAGATaGCCTGGCACTGGCCAGGTG	+
Preference number: 2 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCGRRPR*PGTGQV Trigger: CACCTGGCCAGTGCCAGGGCATCTAGGCCTCCTCCC...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTCTGGCACTGGCCAGGTaGTGGGTCTGCGCGGCGGCA	+
Preference number: 2 (lower is better) Translates to: AYLLQSKTYSATHRSGLLLALAR*WVCAAA Trigger: TGCCGCCGCGCAGACCCAGCACCTGGCCAGTGCCAG...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGAGGGCAGCCTGGAGTCTaGGCTAGGGACAATCTCAGC	+
Preference number: 2 (lower is better) Translates to: TLEARKKQRESLRSMRERGQPGV*ARDNLS Trigger: GCTGAGATTGTCCCTAGCGCAGACTCCAGGCTGCCC...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 90 bp	AGTGGATTGCGGCTGGACGTACCTACCCTTCAGCCTCACCCAGCCTaGGCTCTTTCGCGATGCTTTTATTTCCAAGTTTACTGCGGAGGA	+
Preference number: 2 (lower is better) Translates to: SGLRLDVPTLQPHPA*ALSRCFYFQVYCGG Trigger: TCCTCCGCAGTAAACTTGGAAATAAAAGCATCGCGAAAGAGCCAAGGCTGGGTGAGGCTGAAGGGTAGGTACGTCCAGCCGCAATCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	ATTTCCAAGTTTACTGCGGAGGATGCTTTCTTTTGGCTTTCTTGTTCAGTCTGTCTGGCACTGGCCAGGTaGTGGGTCTGCGCGGCGGCA	+
Preference number: 2 (lower is better) Translates to: ISKFTAEDAFFWLSCSVCLALAR*WVCAAA Trigger: TGCCGCCGCGCAGACCCAGCACCTGGCCAGTGCCAG...ACAGACTGAACAAGAAAGCCAAAAGAAAGCATCCTCCGCAGTAAACTTGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATGAGGCCTGGCCCTTGTaGGCGGTCTCAGAGGCTGGG	+
Preference number: 2 (lower is better) Translates to: STNQSLSPLYLSYPEVLYEAWPL*AVSEAG Trigger: CCCAGCCTCTGAGACCGCCCACAAGGGCCAGGCCTC...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	CCACATACAATACAAGGACTCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCGGGAGGAGGCCTAGATaGCCTGGCACTGGCCAGGTG	+
Preference number: 2 (lower is better) Translates to: PHTIQGLNQSEPFSSLSLGRRPR*PGTGQV Trigger: CACCTGGCCAGTGCCAGGGCATCTAGGCCTCCTCCC...GAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGAGTCCTTGTATTGTATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	AAAAACACTGCTTGGAAATGGCAGTATTACATAATCACATCCGCAGCACCCATTGAGGCCTGGCCCTTGTaGGCGGTCTCAGAGGCTGGG	+
Preference number: 2 (lower is better) Translates to: KNTAWKWQYYIITSAAPIEAWPL*AVSEAG Trigger: CCCAGCCTCTGAGACCGCCCACAAGGGCCAGGCCTC...AATGGGTGCTGCGGATGTGATTATGTAATACTGCCATTTCCAAGCAGTGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATTTGGTGGTGGAGGCCTaGCCCTTGTGGGCGGTCTCA	+
Preference number: 2 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHLVVEA*PLWAVS Trigger: TGAGACCGCCCACAAGGGCCAGGCCTCCACCACCAA...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GCAACTCCTTTTAGCAACCCTAGCCTGTTCTGGAGGTTTCAAACATACCTTTGCAAAGCCCGGGTTTGGTaGTGGAGGCCTGGCCCTTGT	+
Preference number: 2 (lower is better) Translates to: ATPFSNPSLFWRFQTYLCKARVW*WRPGPC Trigger: ACAAGGGCCAGGCCTCCACCACCAAACCCGGGCTTT...GCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATAGCAAAGCCCGGGTTTaGTGGTGGAGGCCTGGCCCT	+
Preference number: 2 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHSKARV*WWRPGP Trigger: AGGGCCAGGCCTCCACCACCAAACCCGGGCTTTGCT...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 90 bp	AAAGTTGGCAACGCATTGAGGGCAGAAGTCAAGGGAAGTGCGCGGTaGGTGCTGTCTTTCCACACCCTTTTATCGGAGTCAGTCCAGAAA	+
Preference number: 2 (lower is better) Translates to: KVGNALRAEVKGSAR*VLSFHTLLSESVQK Trigger: TTTCTGGACTGACTCCGATAAAAGGGTGTGGAAAGACAGCACCAACCGCGCACTTCCCTTGACTTCTGCCCTCAATGCGTTGCCAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 90 bp	CATAATCACATCCGCAGCACCCATTCAATCAAAGTTGGCAACGCATaGAGGGCAGAAGTCAAGGGAAGTGCGCGGTTGGTGCTGTCTTTC	+
Preference number: 2 (lower is better) Translates to: HNHIRSTHSIKVGNA*RAEVKGSARLVLSF Trigger: GAAAGACAGCACCAACCGCGCACTTCCCTTGACTTCTGCCCTCAATGCGTTGCCAACTTTGATTGAATGGGTGCTGCGGATGTGATTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTGAGCAGAGTCAGACCTaGAGGAAACCTGGTGCGTCT	+
Preference number: 2 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCEQSQT*RKPGAS Trigger: AGACGCACCAGGTTTCCTGCAGGTCTGACTCTGCTC...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	CCACATACAATACAAGGACTCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCTTGGTGGTGGAGGCCTaGCCCTTGTGGGCGGTCTCA	+
Preference number: 2 (lower is better) Translates to: PHTIQGLNQSEPFSSLSLLVVEA*PLWAVS Trigger: TGAGACCGCCCACAAGGGCCAGGCCTCCACCACCAA...GAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGAGTCCTTGTATTGTATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GCAACTCCTTTTAGCAACCCTAGCCTGTTCTGGAGGTTTCAAACATACCTTTGCGAGCAGAGTCAGACCTaGAGGAAACCTGGTGCGTCT	+
Preference number: 2 (lower is better) Translates to: ATPFSNPSLFWRFQTYLCEQSQT*RKPGAS Trigger: AGACGCACCAGGTTTCCTGCAGGTCTGACTCTGCTC...GCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GAATCTTTAGGCATGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTTGGTTTGGCTCTTTCGCGATaGTTTTATTTCCAAGTTTAC	+
Preference number: 2 (lower is better) Translates to: ESLGMVHPERQSAKPGFGLALSR*FYFQVY Trigger: GTAAACTTGGAAATAAAAGCATCGCGAAAGAGCCAA...ACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCATGCCTAAAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTAAAGCCCGGGTTTGGTaGTGGAGGCCTGGCCCTTGT	+
Preference number: 2 (lower is better) Translates to: AYLLQSKTYSATHRSGLLKARVW*WRPGPC Trigger: ACAAGGGCCAGGCCTCCACCACCAAACCCGGGCTTT...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGACACTTTCCTTTGGGTTaGAAGGGGAAGAGTAGGCAG	+
Preference number: 2 (lower is better) Translates to: TLEARKKQRESLRSMRERHFPLG*KGKSRQ Trigger: CTGCCTACTCTTCCCCTTCCAACCCAAAGGAAAGTG...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTAGAAGTCAAGGGAAGTaGGCGGTTGGTGCTGTCTTT	+
Preference number: 2 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCRSQGK*AVGAVF Trigger: AAAGACAGCACCAACCGCGCACTTCCCTTGACTTCT...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR TCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGATTCTTGTTCAGTCTGTaGACTTCAGAAGCGGCGAAT	+
Preference number: 2 (lower is better) Translates to: TLEARKKQRESLRSMRERFLFSL*TSEAAN Trigger: ATTCGCCGCTTCTGAAGTTCACAGACTGAACAAGAA...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATACCAAACCACAGAAATaGGCAGCCTGGAGTCTGCGC	+
Preference number: 2 (lower is better) Translates to: STNQSLSPLYLSYPEVLYTKPQK*AAWSLR Trigger: GCGCAGACTCCAGGCTGCCCATTTCTGTGGTTTGGT...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGAACATGGTTGTCTGGCTaGGCTCAATTTGTGCTATTG	+
Preference number: 2 (lower is better) Translates to: TLEARKKQRESLRSMRERTWLSG*AQFVLL Trigger: CAATAGCACAAATTGAGCCCAGCCAGACAACCATGT...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTTCAGGGAGGCCTTCTTaGCTTACCCTCAGAGCCTCT	+
Preference number: 2 (lower is better) Translates to: AYLLQSKTYSATHRSGLLSGRPS*LTLRAS Trigger: AGAGGCTCTGAGGGTAAGCCAAGAAGGCCTCCCTGA...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTTGGTCCCTCCTTTCTTaGACTTCAGAAAGAGTCTCA	+
Preference number: 2 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCWSLLS*TSERVS Trigger: TGAGACTCTTTCTGAAGTCCAAGAAAGGAGGGACCA...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGAAACCCTAGCCTGTTCTaGAGGTTTCAAACATACCTT	+
Preference number: 2 (lower is better) Translates to: TLEARKKQRESLRSMRERNPSLF*RFQTYL Trigger: AAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTT...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 90 bp	TTTGAAAGTAGCCAAGCTGATGGACCAGAACTTTGTCACTTTCCTTaGGGTTGGAAGGGGAAGAGTAGGCAGTCTGAAATGGAGGAAACA	+
Preference number: 2 (lower is better) Translates to: FESSQADGPELCHFP*GWKGKSRQSEMEET Trigger: TGTTTCCTCCATTTCAGACTGCCTACTCTTCCCCTTCCAACCCAAAGGAAAGTGACAAAGTTCTGGTCCATCAGCTTGGCTACTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	AAAAACACTGCTTGGAAATGGCAGTATTACATAATCACATCCGCAGCACCCATTACGAGATGTCCCTGTTaGCCCTTTTCCTCTTCCGGT	+
Preference number: 2 (lower is better) Translates to: KNTAWKWQYYIITSAAPITRCPC*PFSSSG Trigger: ACCGGAAGAGGAAAAGGGGCAACAGGGACATCTCGT...AATGGGTGCTGCGGATGTGATTATGTAATACTGCCATTTCCAAGCAGTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATAGTGTGCAGTTTAGGTaGGTTAGGCATCTTCACCCT	+
Preference number: 2 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHSVQFR*VRHLHP Trigger: AGGGTGAAGATGCCTAACGCACCTAAACTGCACACT...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	CCACATACAATACAAGGACTCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCCTGCAGGAAACCTGGTaGGTCTTTCTTTTCAGGTCG	+
Preference number: 2 (lower is better) Translates to: PHTIQGLNQSEPFSSLSLLQETW*VFLFRS Trigger: CGACCTGAAAAGAAAGACGCACCAGGTTTCCTGCAG...GAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGAGTCCTTGTATTGTATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATAGAAGTCAAGGGAAGTaGGCGGTTGGTGCTGTCTTT	+
Preference number: 2 (lower is better) Translates to: STNQSLSPLYLSYPEVLYRSQGK*AVGAVF Trigger: AAAGACAGCACCAACCGCGCACTTCCCTTGACTTCT...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGAGAGGATGCTTTCTTTTaGCTTTCTTGTTCAGTCTGT	+
Preference number: 2 (lower is better) Translates to: TLEARKKQRESLRSMREREDAFF*LSCSVC Trigger: ACAGACTGAACAAGAAAGCCAAAAGAAAGCATCCTC...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR TCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGAACATGTGTAACAATATaGGCCTTAGCACAAAAACTC	+
Preference number: 2 (lower is better) Translates to: TLEARKKQRESLRSMRERTCVTI*ALAQKL Trigger: GAGTTTTTGTGCTAAGGCTCATATTGTTACACATGT...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTAGTGTGCAGTTTAGGTaGGTTAGGCATCTTCACCCT	+
Preference number: 2 (lower is better) Translates to: AYLLQSKTYSATHRSGLLSVQFR*VRHLHP Trigger: AGGGTGAAGATGCCTAACGCACCTAAACTGCACACT...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATGTTTACTGCGGAGGATaGTTTCTTTTGGCTTTCTTG	+
Preference number: 2 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHVYCGG*FLLAFL Trigger: CAAGAAAGCCAAAAGAAAGCATCCTCCGCAGTAAAC...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	CCACATACAATACAAGGACTCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCTGGTCCCTCCTTTCTTaGACTTCAGAAAGAGTCTCA	+
Preference number: 2 (lower is better) Translates to: PHTIQGLNQSEPFSSLSLWSLLS*TSERVS Trigger: TGAGACTCTTTCTGAAGTCCAAGAAAGGAGGGACCA...GAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGAGTCCTTGTATTGTATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTCCATTCAATCAAAGTTaGCAACGCATTGAGGGCAGA	+
Preference number: 2 (lower is better) Translates to: AYLLQSKTYSATHRSGLLPFNQS*QRIEGR Trigger: TCTGCCCTCAATGCGTTGCCAACTTTGATTGAATGG...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR TCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATGCATATTTTCACTGGTaGTGTAGCAAAACACAGGTA	+
Preference number: 2 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHAYFHW*CSKTQV Trigger: TACCTGTGTTTTGCTACATCACCAGTGAAAATATGC...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATCCCACACAGTGTTTATaGATCAGACACAGACCATTT	+
Preference number: 2 (lower is better) Translates to: STNQSLSPLYLSYPEVLYPTQCL*IRHRPF Trigger: AAATGGTCTGTGTCTGATGCATAAACACTGTGTGGG...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTCCCACACAGTGTTTATaGATCAGACACAGACCATTT	+
Preference number: 2 (lower is better) Translates to: AYLLQSKTYSATHRSGLLPTQCL*IRHRPF Trigger: AAATGGTCTGTGTCTGATGCATAAACACTGTGTGGG...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATTTTAGGCAGCCCTTTTaGAAGAAGTGGAAGAAAGAG	+
Preference number: 2 (lower is better) Translates to: STNQSLSPLYLSYPEVLYFRQPF*KKWKKE Trigger: CTCTTTCTTCCACTTCTTCCAAAAGGGCTGCCTAAA...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATAACCCTAGCCTGTTCTaGAGGTTTCAAACATACCTT	+
Preference number: 2 (lower is better) Translates to: STNQSLSPLYLSYPEVLYNPSLF*RFQTYL Trigger: AAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTT...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 90 bp	AGCGTCAGCTTACTTTACACAACACACAATGACAAGCAAAACTGCTaGGTTTGCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCA	+
Preference number: 2 (lower is better) Translates to: SVSLLYTTHNDKQNC*VCLSSSIKNVLCYP Trigger: TGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGCAAACCAAGCAGTTTTGCTTGTCATTGTGTGTTGTGTAAAGTAAGCTGACGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR TCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTGCATATTTTCACTGGTaGTGTAGCAAAACACAGGTA	+
Preference number: 2 (lower is better) Translates to: AYLLQSKTYSATHRSGLLAYFHW*CSKTQV Trigger: TACCTGTGTTTTGCTACATCACCAGTGAAAATATGC...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR TCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATCTTTTCCAGATTTCATaGATCAGAATGCTGGTGATT	+
Preference number: 2 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHLFQIS*IRMLVI Trigger: AATCACCAGCATTCTGATTCATGAAATCTGGAAAAG...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATCTCTCATATCTTCTCTaGTGTGTTTCAACCATCAAT	+
Preference number: 2 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHLSYLL*CVSTIN Trigger: ATTGATGGTTGAAACACAGCAGAGAAGATATGAGAG...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATTTGGCTCTTTCGCGATaGTTTTATTTCCAAGTTTAC	+
Preference number: 2 (lower is better) Translates to: STNQSLSPLYLSYPEVLYLALSR*FYFQVY Trigger: GTAAACTTGGAAATAAAAGCATCGCGAAAGAGCCAA...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTACCTACCAAAAACACTaGTTGGAAATGGCAGTATTA	+
Preference number: 2 (lower is better) Translates to: AYLLQSKTYSATHRSGLLTYQKH*LEMAVL Trigger: TAATACTGCCATTTCCAAGCAGTGTTTTTGGTAGGT...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATAACACTGCTTGGAAATaGCAGTATTACATAATCACA	+
Preference number: 2 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHNTAWK*QYYIIT Trigger: TGTGATTATGTAATACTGCCATTTCCAAGCAGTGTT...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR GCA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGGTTTACTGCGGAGGATaGTTTCTTTTGGCTTTCTTG	+
Preference number: 2 (lower is better) Translates to: EFISYPSQLLIHKDRKRKVYCGG*FLLAFL Trigger: CAAGAAAGCCAAAAGAAAGCATCCTCCGCAGTAAAC...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGTTTAGGCAGCCCTTTTaGAAGAAGTGGAAGAAAGAG	+
Preference number: 2 (lower is better) Translates to: EFISYPSQLLIHKDRKRKFRQPF*KKWKKE Trigger: CTCTTTCTTCCACTTCTTCCAAAAGGGCTGCCTAAA...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CCA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGAACACTGCTTGGAAATaGCAGTATTACATAATCACA	+
Preference number: 2 (lower is better) Translates to: EFISYPSQLLIHKDRKRKNTAWK*QYYIIT Trigger: TGTGATTATGTAATACTGCCATTTCCAAGCAGTGTT...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 72 bp	AGGGGAGGAGGCCTAGATGCCCTGGCACTGGCCAGGTaGTGGGTCTGCGCGGCGGCAGCGGCGGCGGCGGCG	+
Preference number: 3 (lower is better) Translates to: RGGGLDALALAR*WVCAAAAAAAA Trigger: CGCCGCCGCCGCCGCTGCCGCCGCGCAGACCCAGCACCTGGCCAGTGCCAGGGCATCTAGGCCTCCTCCCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 72 bp	CACGCCTGTCTTTGGGCGGAGGGGAGGAGGCCTAGATaGCCTGGCACTGGCCAGGTGCTGGGTCTGCGCGGC	+
Preference number: 3 (lower is better) Translates to: HACLWAEGRRPR*PGTGQVLGLRG Trigger: GCCGCGCAGACCCAGCACCTGGCCAGTGCCAGGGCATCTAGGCCTCCTCCCCTCCGCCCAAAGACAGGCGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	CAAAGCCCGGGTTTGGTGGTGGAGGCCTGGCCCTTGTaGGCGGTCTCAGAGGCTGGGCCCGGGCCCCGCTTT	+
Preference number: 3 (lower is better) Translates to: QSPGLVVEAWPL*AVSEAGPGPRF Trigger: AAAGCGGGGCCCGGGCCCAGCCTCTGAGACCGCCCACAAGGGCCAGGCCTCCACCACCAAACCCGGGCTTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	GGCAGTCAGCAAAGCCCGGGTTTGGTGGTGGAGGCCTaGCCCTTGTGGGCGGTCTCAGAGGCTGGGCCCGGG	+
Preference number: 3 (lower is better) Translates to: GSQQSPGLVVEA*PLWAVSEAGPG Trigger: CCCGGGCCCAGCCTCTGAGACCGCCCACAAGGGCCAGGCCTCCACCACCAAACCCGGGCTTTGCTGACTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GCAACTCCTTTTAGCAACCCTAGCCTGTTCTGGAGGTTTCAAACATACCTTTGCGTGGCACGCCTGTCTTaGGGCGGAGGGGAGGAGGCC	+
Preference number: 3 (lower is better) Translates to: ATPFSNPSLFWRFQTYLCVARLS*GGGEEA Trigger: GGCCTCCTCCCCTCCGCCCAAAGACAGGCGTGCCAC...GCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 72 bp	TCCGCAGCACCCATTCAATCAAAGTTGGCAACGCATTaGGGGCAGAAGTCAAGGGAAGTGCGCGGTTGGTGC	+
Preference number: 3 (lower is better) Translates to: SAAPIQSKLATH*GQKSREVRGWC Trigger: GCACCAACCGCGCACTTCCCTTGACTTCTGCCCTCAATGCGTTGCCAACTTTGATTGAATGGGTGCTGCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATGTGGCACGCCTGTCTTaGGGCGGAGGGGAGGAGGCC	+
Preference number: 3 (lower is better) Translates to: STNQSLSPLYLSYPEVLYVARLS*GGGEEA Trigger: GGCCTCCTCCCCTCCGCCCAAAGACAGGCGTGCCAC...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATCAGCAAAGCCCGGGTTaGGTGGTGGAGGCCTGGCCC	+
Preference number: 3 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHQQSPG*VVEAWP Trigger: GGGCCAGGCCTCCACCACCAAACCCGGGCTTTGCTG...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 72 bp	AGTTGGCAACGCATTGAGGGCAGAAGTCAAGGGAAGTaGGCGGTTGGTGCTGTCTTTCCACACCCTTTTATC	+
Preference number: 3 (lower is better) Translates to: SWQRIEGRSQGK*AVGAVFPHPFI Trigger: GATAAAAGGGTGTGGAAAGACAGCACCAACCGCGCACTTCCCTTGACTTCTGCCCTCAATGCGTTGCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	CACTGTCCAAGAGCAGAGTCAGACCTGCAGGAAACCTaGTGCGTCTTTCTTTTCAGGTCGCTCCCCATAAAG	+
Preference number: 3 (lower is better) Translates to: HCPRAESDLQET*CVFLFRSLPIK Trigger: CTTTATGGGGAGCGACCTGAAAAGAAAGACGCACCAGGTTTCCTGCAGGTCTGACTCTGCTCTTGGACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTAACGAGATGTCCCTGTaGCCCCTTTTCCTCTTCCGG	+
Preference number: 3 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCNEMSL*PLFLFR Trigger: CCGGAAGAGGAAAAGGGGCAACAGGGACATCTCGTT...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	GGCTGGACGTACCTACCCTTCAGCCTCACCCAGCCTTaGCTCTTTCGCGATGCTTTTATTTCCAAGTTTACT	+
Preference number: 3 (lower is better) Translates to: GWTYLPFSLTQP*LFRDAFISKFT Trigger: AGTAAACTTGGAAATAAAAGCATCGCGAAAGAGCCAAGGCTGGGTGAGGCTGAAGGGTAGGTACGTCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	AGCCTGGCCCATTCCTCACTTTCAGGGAGGCCTTCTTaGCTTACCCTCAGAGCCTCTAAAACAACAACAACA	+
Preference number: 3 (lower is better) Translates to: SLAHSSLSGRPS*LTLRASKTTTT Trigger: TGTTGTTGTTGTTTTAGAGGCTCTGAGGGTAAGCCAAGAAGGCCTCCCTGAAAGTGAGGAATGGGCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 72 bp	ATGCAGGACATCTCGGTGTGGACAGTACCTCAAGTGTaGAGTTTAGGTGCGTTAGGCATCTTCACCCTTCTT	+
Preference number: 3 (lower is better) Translates to: MQDISVWTVPQV*SLGALGIFTLL Trigger: AAGAAGGGTGAAGATGCCTAACGCACCTAAACTGCACACTTGAGGTACTGTCCACACCGAGATGTCCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	GCCAAGCTGATGGACCAGAACTTTGTCACTTTCCTTTaGGTTGGAAGGGGAAGAGTAGGCAGTCTGAAATGG	+
Preference number: 3 (lower is better) Translates to: AKLMDQNFVTFL*VGRGRVGSLKW Trigger: CCATTTCAGACTGCCTACTCTTCCCCTTCCAACCCAAAGGAAAGTGACAAAGTTCTGGTCCATCAGCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATAACGAGATGTCCCTGTaGCCCCTTTTCCTCTTCCGG	+
Preference number: 3 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHNEMSL*PLFLFR Trigger: CCGGAAGAGGAAAAGGGGCAACAGGGACATCTCGTT...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGCAGCAAAGCCCGGGTTaGGTGGTGGAGGCCTGGCCC	+
Preference number: 3 (lower is better) Translates to: EFISYPSQLLIHKDRKRKQQSPG*VVEAWP Trigger: GGGCCAGGCCTCCACCACCAAACCCGGGCTTTGCTG...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 72 bp	GGCATTGGTAAGGAAGATGAAGAGTTACTATGCCTCTaGAGGACCAAACCACAGAAATGGGCAGCCTGGAGT	+
Preference number: 3 (lower is better) Translates to: GIGKEDEELLCL*RTKPQKWAAWS Trigger: ACTCCAGGCTGCCCATTTCTGTGGTTTGGTCCTTCAGAGGCATAGTAACTCTTCATCTTCCTTACCAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	GCTAAAGCAACTCCTTTTAGCAACCCTAGCCTGTTCTaGAGGTTTCAAACATACCTTTGCGTGGGGAAGCTC	+
Preference number: 3 (lower is better) Translates to: AKATPFSNPSLF*RFQTYLCVGKL Trigger: GAGCTTCCCCACGCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGCTTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTCTGGCTGGGCTCAATTaGTGCTATTGGGTCTGTCTG	+
Preference number: 3 (lower is better) Translates to: AYLLQSKTYSATHRSGLLLAGLN*CYWVCL Trigger: CAGACAGACCCAATAGCACAAATTGAGCCCAGCCAG...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 72 bp	AAACAAAAACCCACCAAGATCCCTGTCACACACCAGTaGTGTGTTCCATTTACAAACAGCCTGGCCCATTCC	+
Preference number: 3 (lower is better) Translates to: KQKPTKIPVTHQ*CVPFTNSLAHS Trigger: GGAATGGGCCAGGCTGTTTGTAAATGGAACACATCACTGGTGTGTGACAGGGATCTTGGTGGGTTTTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGATACCAAAAACACTGCTaGGAAATGGCAGTATTACAT	+
Preference number: 3 (lower is better) Translates to: TLEARKKQRESLRSMRERYQKHC*EMAVLH Trigger: ATGTAATACTGCCATTTCCAAGCAGTGTTTTTGGTA...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTTCATACCCTGAGGTGTaGTATTTCCAGCTTGTAAAT	+
Preference number: 3 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCSYPEV*YFQLVN Trigger: ATTTACAAGCTGGAAATACAACACCTCAGGGTATGA...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 72 bp	CTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTCTGTaGGAAACTATTTCTTGTCCTCATAGTTTCCCAGAA	+
Preference number: 3 (lower is better) Translates to: LAGLNLCYWVCL*ETISCPHSFPE Trigger: TTCTGGGAAACTATGAGGACAAGAAATAGTTTCTCACAGACAGACCCAATAGCACAAATTGAGCCCAGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTAAAAACAGGGATATATaGGAAGGCAAGGTGATCAAA	+
Preference number: 3 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCKNRDI*EGKVIK Trigger: TTTGATCACCTTGCCTTCCAATATATCCCTGTTTTT...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 72 bp	AAGTGCAAGCGTCAGCTTACTTTACACAACACACAATaGCAAGCAAAACTGCTTGGTTTGCCTATCTTCTTC	+
Preference number: 3 (lower is better) Translates to: KCKRQLTLHNTQ*QAKLLGLPIFF Trigger: GAAGAAGATAGGCAAACCAAGCAGTTTTGCTTGTCATTGTGTGTTGTGTAAAGTAAGCTGACGCTTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR GCA 72 bp	TTGGCTCTTTCGCGATGCTTTTATTTCCAAGTTTACTaGGGAGGATGCTTTCTTTTGGCTTTCTTGTTCAGT	+
Preference number: 3 (lower is better) Translates to: LALSRCFYFQVY*GGCFLLAFLFS Trigger: ACTGAACAAGAAAGCCAAAAGAAAGCATCCTCCGCAGTAAACTTGGAAATAAAAGCATCGCGAAAGAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	CCACATACAATACAAGGACTCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCTTGTTCCCCAAAGACTaGAATATGGCCAAGAAAAAC	+
Preference number: 3 (lower is better) Translates to: PHTIQGLNQSEPFSSLSLLFPKD*NMAKKN Trigger: GTTTTTCTTGGCCATATTCAAGTCTTTGGGGAACAA...GAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGAGTCCTTGTATTGTATGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATAAAAACAGGGATATATaGGAAGGCAAGGTGATCAAA	+
Preference number: 3 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHKNRDI*EGKVIK Trigger: TTTGATCACCTTGCCTTCCAATATATCCCTGTTTTT...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR TCA 72 bp	TTGAATTATTTATTGTACAGACTTGTCAGGGGAAGGTaGTTGGGTAGATGGGGTGATCAAAGCTTGGATAGT	+
Preference number: 3 (lower is better) Translates to: LNYLLYRLVRGR*LGRWGDQSLDS Trigger: ACTATCCAAGCTTTGATCACCCCATCTACCCAATCACCTTCCCCTGACAAGTCTGTACAATAAATAATTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGGGAGGATGCTTTCTTTaGGCTTTCTTGTTCAGTCTG	+
Preference number: 3 (lower is better) Translates to: EFISYPSQLLIHKDRKRKGGCFL*AFLFSL Trigger: CAGACTGAACAAGAAAGCCAAAAGAAAGCATCCTCC...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	TGTTTATTAAAACCTACCAAAAACACTGCTTGGAAATaGCAGTATTACATAATCACATCCGCAGCACCCATT	+
Preference number: 3 (lower is better) Translates to: CLLKPTKNTAWK*QYYIITSAAPI Trigger: AATGGGTGCTGCGGATGTGATTATGTAATACTGCCATTTCCAAGCAGTGTTTTTGGTAGGTTTTAATAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR-3UTR CAA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGTACCAAAAACACTGCTaGGAAATGGCAGTATTACAT	+
Preference number: 3 (lower is better) Translates to: EFISYPSQLLIHKDRKRKYQKHC*EMAVLH Trigger: ATGTAATACTGCCATTTCCAAGCAGTGTTTTTGGTA...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CCA 72 bp	TACTTTACACAACACACAATGACAAGCAAAACTGCTTaGTTTGCCTATCTTCTTCAATCAAAAACGTACTCT	+
Preference number: 3 (lower is better) Translates to: YFTQHTMTSKTA*FAYLLQSKTYS Trigger: AGAGTACGTTTTTGATTGAAGAAGATAGGCAAACCAAGCAGTTTTGCTTGTCATTGTGTGTTGTGTAAAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 72 bp	CAGCAAAGCCCGGGTTTGGTGGTGGAGGCCTGGCCCTaGTGGGCGGTCTCAGAGGCTGGGCCCGGGCCCCGC	+
Preference number: 4 (lower is better) Translates to: QQSPGLVVEAWP*WAVSEAGPGPR Trigger: GCGGGGCCCGGGCCCAGCCTCTGAGACCGCCCACAAGGGCCAGGCCTCCACCACCAAACCCGGGCTTTGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	TGGGGCCGTGGCACGCCTGTCTTTGGGCGGAGGGGAGGAGGCCTAGATGCCCTGTATGGCCGCCGTTGCTaGCGGCCATGGCCCCCTGCA	+
Preference number: 4 (lower is better) Translates to: WGRGTPVFGRRGGGLDALYGRRC*RPWPPA Trigger: TGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATA...CAGGGCATCTAGGCCTCCTCCCCTCCGCCCAAAGACAGGCGTGCCACGGCCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	TGGGGCCGTGGCACGCCTGTCTTTGGGCGGAGGGGAGGAGGCCTAGATGCCCTGACCCACTGGTGCGCGTaGCTCAGCATATGGCCGCCG	+
Preference number: 4 (lower is better) Translates to: WGRGTPVFGRRGGGLDALTHWCA*LSIWPP Trigger: CGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGT...CAGGGCATCTAGGCCTCCTCCCCTCCGCCCAAAGACAGGCGTGCCACGGCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 72 bp	TGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTaGGTGGTGGAGGCCTGGCCCTTGTGGGCGGTCTCA	+
Preference number: 4 (lower is better) Translates to: WSTPSGSQQSPG*VVEAWPLWAVS Trigger: TGAGACCGCCCACAAGGGCCAGGCCTCCACCACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	GAATCTTTAGGCATGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTTGGTCGTGGGGCAGGGCGGTaGCCCACTGGTGCGCGTGGC	+
Preference number: 4 (lower is better) Translates to: ESLGMVHPERQSAKPGFGRGAGR*PTGARG Trigger: GCCACGCGCACCAGTGGGTCACCGCCCTGCCCCACG...ACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCATGCCTAAAGATTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GAATCTTTAGGCATGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTTGGTCCGGCCGCGTCCGAGTaGACAATGGAGCCGGCCGTG	+
Preference number: 4 (lower is better) Translates to: ESLGMVHPERQSAKPGFGPAASE*TMEPAV Trigger: CACGGCCGGCTCCATTGTGCACTCGGACGCGGCCGG...ACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCATGCCTAAAGATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	GAATCTTTAGGCATGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTTGGTCAATGGAGCCGGCCGTaGGCAGGCTGTTCCCCGGCA	+
Preference number: 4 (lower is better) Translates to: ESLGMVHPERQSAKPGFGQWSRP*AGCSPA Trigger: TGCCGGGGAACAGCCTGCTCACGGCCGGCTCCATTG...ACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCATGCCTAAAGATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	GAATCTTTAGGCATGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTTGGTCACTGCACGCTGGTCTaGAGCCCGTGGTGCGGTGGC	+
Preference number: 4 (lower is better) Translates to: ESLGMVHPERQSAKPGFGHCTLV*SPWCGG Trigger: GCCACCGCACCACGGGCTTCAGACCAGCGTGCAGTG...ACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCATGCCTAAAGATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GAATCTTTAGGCATGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTTGGTGCGTGGCTCAGCATATaGCCGCCGTTGCTGGCGGCC	+
Preference number: 4 (lower is better) Translates to: ESLGMVHPERQSAKPGFGAWLSI*PPLLAA Trigger: GGCCGCCAGCAACGGCGGCCATATGCTGAGCCACGC...ACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCATGCCTAAAGATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	GAATCTTTAGGCATGGTCCACCCCGAGCGGCAGTCAGCAAAGCCCGGGTTTGGTCCATGGCCCCCTGCATaGAGTCGCTCTGGACCATCT	+
Preference number: 4 (lower is better) Translates to: ESLGMVHPERQSAKPGFGPWPPA*SRSGPS Trigger: AGATGGTCCAGAGCGACTTCATGCAGGGGGCCATGG...ACCAAACCCGGGCTTTGCTGACTGCCGCTCGGGGTGGACCATGCCTAAAGATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTCTCTGCGGCGGCGGCTaGTGGCCACCCGCCATGGAC	+
Preference number: 4 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCLCGGG*WPPAMD Trigger: GTCCATGGCGGGTGGCCAGCAGCCGCCGCCGCAGAG...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	AAACACTGTCCAAGAGCAGAGTCAGACCTGCAGGAAACCTGGTGCGTCTTTCTTGCTGGCCACCCGCCATaGACGGGAGGTGAGCGGCAG	+
Preference number: 4 (lower is better) Translates to: KHCPRAESDLQETWCVFLAGHPP*TGGERQ Trigger: CTGCCGCTCACCTCCCGTCCATGGCGGGTGGCCAGC...AAGAAAGACGCACCAGGTTTCCTGCAGGTCTGACTCTGCTCTTGGACAGTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATGAGGGTCGTGGCTGTTaGGCCCTGGCCCCGCGCCGC	+
Preference number: 4 (lower is better) Translates to: STNQSLSPLYLSYPEVLYEGRGC*ALAPRR Trigger: GCGGCGCGGGGCCAGGGCTCAACAGCCACGACCCTC...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTGAGGGTCGTGGCTGTTaGGCCCTGGCCCCGCGCCGC	+
Preference number: 4 (lower is better) Translates to: AYLLQSKTYSATHRSGLLEGRGC*ALAPRR Trigger: GCGGCGCGGGGCCAGGGCTCAACAGCCACGACCCTC...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGAGCGGCCATGGCCCCCTaGATGAAGTCGCTCTGGACC	+
Preference number: 4 (lower is better) Translates to: TLEARKKQRESLRSMRERAAMAP*MKSLWT Trigger: GGTCCAGAGCGACTTCATGCAGGGGGCCATGGCCGC...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTTATGGCCGCCGTTGCTaGCGGCCATGGCCCCCTGCA	+
Preference number: 4 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCYGRRC*RPWPPA Trigger: TGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATA...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	AAACACTGTCCAAGAGCAGAGTCAGACCTGCAGGAAACCTGGTGCGTCTTTCTTAAGCCCGTGGTGCGGTaGCGGTGTGTCAGCGCTCAC	+
Preference number: 4 (lower is better) Translates to: KHCPRAESDLQETWCVFLKPVVR*RCVSAH Trigger: GTGAGCGCTGACACACCGCCACCGCACCACGGGCTT...AAGAAAGACGCACCAGGTTTCCTGCAGGTCTGACTCTGCTCTTGGACAGTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	GCAACTCCTTTTAGCAACCCTAGCCTGTTCTGGAGGTTTCAAACATACCTTTGCCACTGCACGCTGGTCTaGAGCCCGTGGTGCGGTGGC	+
Preference number: 4 (lower is better) Translates to: ATPFSNPSLFWRFQTYLCHCTLV*SPWCGG Trigger: GCCACCGCACCACGGGCTTCAGACCAGCGTGCAGTG...GCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATCTCTGCGGCGGCGGCTaGTGGCCACCCGCCATGGAC	+
Preference number: 4 (lower is better) Translates to: STNQSLSPLYLSYPEVLYLCGGG*WPPAMD Trigger: GTCCATGGCGGGTGGCCAGCAGCCGCCGCCGCAGAG...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTTCCGGCGTCTGCTGCTaGATGCCAGGGGGCGTCATG	+
Preference number: 4 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCSGVCC*MPGGVM Trigger: CATGACGCCCCCTGGCATCCAGCAGCAGACGCCGGA...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATCAATGGAGCCGGCCGTaGGCAGGCTGTTCCCCGGCA	+
Preference number: 4 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHQWSRP*AGCSPA Trigger: TGCCGGGGAACAGCCTGCTCACGGCCGGCTCCATTG...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGACCATGGCCCCCTGCATaGAGTCGCTCTGGACCATCT	+
Preference number: 4 (lower is better) Translates to: TLEARKKQRESLRSMRERPWPPA*SRSGPS Trigger: AGATGGTCCAGAGCGACTTCATGCAGGGGGCCATGG...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	CCACATACAATACAAGGACTCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCCCGGCCGCGTCCGAGTaGACAATGGAGCCGGCCGTG	+
Preference number: 4 (lower is better) Translates to: PHTIQGLNQSEPFSSLSLPAASE*TMEPAV Trigger: CACGGCCGGCTCCATTGTGCACTCGGACGCGGCCGG...GAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGAGTCCTTGTATTGTATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGAGTGAAGCCTCCGGGCTaGGAGTACAGCAGACTCTGC	+
Preference number: 4 (lower is better) Translates to: TLEARKKQRESLRSMRERVKPPG*EYSRLC Trigger: GCAGAGTCTGCTGTACTCGCAGCCCGGAGGCTTCAC...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	AAACACTGTCCAAGAGCAGAGTCAGACCTGCAGGAAACCTGGTGCGTCTTTCTTGTGAAGCCTCCGGGCTaGGAGTACAGCAGACTCTGC	+
Preference number: 4 (lower is better) Translates to: KHCPRAESDLQETWCVFLVKPPG*EYSRLC Trigger: GCAGAGTCTGCTGTACTCGCAGCCCGGAGGCTTCAC...AAGAAAGACGCACCAGGTTTCCTGCAGGTCTGACTCTGCTCTTGGACAGTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGATGGTGGGACTGCCAGTaGTCGAGTCAGCCTCCTCCA	+
Preference number: 4 (lower is better) Translates to: TLEARKKQRESLRSMRERWWDCQ*SSQPPP Trigger: TGGAGGAGGCTGACTCGAGCACTGGCAGTCCCACCA...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GCAACCCAAATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATTGGGTCTGTAGGGCGGTGACCCACTaGTGCGCGTGGCTCAGCATA	+
Preference number: 4 (lower is better) Translates to: ATQIHGCLAGLNLCYWVCRAVTH*CAWLSI Trigger: TATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCT...ACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATTTGGGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 72 bp	ATCCGCAGCACCCATTCAATCAAAGTTGGCAACGCATaGAGGGCAGAAGTCAAGGGAAGTGCGCGGTTGGTG	+
Preference number: 4 (lower is better) Translates to: IRSTHSIKVGNA*RAEVKGSARLV Trigger: CACCAACCGCGCACTTCCCTTGACTTCTGCCCTCAATGCGTTGCCAACTTTGATTGAATGGGTGCTGCGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATCGCACTAGCCCGGGGTaGACCAGGCTCTGGGCTCCA	+
Preference number: 4 (lower is better) Translates to: STNQSLSPLYLSYPEVLYRTSPG*TRLWAP Trigger: TGGAGCCCAGAGCCTGGTTCACCCCGGGCTAGTGCG...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATGAGTACAGCAGACTCTaGGGCGGCGGCTGCTGGCCA	+
Preference number: 4 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHEYSRL*GGGCWP Trigger: TGGCCAGCAGCCGCCGCCGCAGAGTCTGCTGTACTC...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATTCCGGCGTCTGCTGCTaGATGCCAGGGGGCGTCATG	+
Preference number: 4 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHSGVCC*MPGGVM Trigger: CATGACGCCCCCTGGCATCCAGCAGCAGACGCCGGA...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 72 bp	CGGCTGGACGTACCTACCCTTCAGCCTCACCCAGCCTaGGCTCTTTCGCGATGCTTTTATTTCCAAGTTTAC	+
Preference number: 4 (lower is better) Translates to: RLDVPTLQPHPA*ALSRCFYFQVY Trigger: GTAAACTTGGAAATAAAAGCATCGCGAAAGAGCCAAGGCTGGGTGAGGCTGAAGGGTAGGTACGTCCAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 72 bp	AACGCATTGAGGGCAGAAGTCAAGGGAAGTGCGCGGTaGGTGCTGTCTTTCCACACCCTTTTATCGGAGTCA	+
Preference number: 4 (lower is better) Translates to: NALRAEVKGSAR*VLSFHTLLSES Trigger: TGACTCCGATAAAAGGGTGTGGAAAGACAGCACCAACCGCGCACTTCCCTTGACTTCTGCCCTCAATGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGACTGCGATCTTGTCAATaGTGGTGGGACTGCCAGTGC	+
Preference number: 4 (lower is better) Translates to: TLEARKKQRESLRSMRERLRSCQ*WWDCQC Trigger: GCACTGGCAGTCCCACCAGCATTGACAAGATCGCAG...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATGCGTCTGCTGCTGGATaGCAGGGGGCGTCATGCGTT	+
Preference number: 4 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHASAAG*QGASCV Trigger: AACGCATGACGCCCCCTGGCATCCAGCAGCAGACGC...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATACCCACTGGTGCGCGTaGCTCAGCATATGGCCGCCG	+
Preference number: 4 (lower is better) Translates to: STNQSLSPLYLSYPEVLYTHWCA*LSIWPP Trigger: CGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGT...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	CCACATACAATACAAGGACTCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCAAGCCCGTGGTGCGGTaGCGGTGTGTCAGCGCTCAC	+
Preference number: 4 (lower is better) Translates to: PHTIQGLNQSEPFSSLSLKPVVR*RCVSAH Trigger: GTGAGCGCTGACACACCGCCACCGCACCACGGGCTT...GAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGAGTCCTTGTATTGTATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTGCGGTGACCCACTGGTaGGCGTGGCTCAGCATATGG	+
Preference number: 4 (lower is better) Translates to: AYLLQSKTYSATHRSGLLAVTHW*AWLSIW Trigger: CCATATGCTGAGCCACGCGCACCAGTGGGTCACCGC...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GTAGGCAGTCTGAAATGGAGGAAACAAATGGGCAGTTTACGAAGCACAAGACATTGGTGGGACTGCCAGTaGTCGAGTCAGCCTCCTCCA	+
Preference number: 4 (lower is better) Translates to: VGSLKWRKQMGSLRSTRHWWDCQ*SSQPPP Trigger: TGGAGGAGGCTGACTCGAGCACTGGCAGTCCCACCA...ATGTCTTGTGCTTCGTAAACTGCCCATTTGTTTCCTCCATTTCAGACTGCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGATCTTGTCAATGCTGGTaGGACTGCCAGTGCTCGAGT	+
Preference number: 4 (lower is better) Translates to: TLEARKKQRESLRSMRERSCQCW*DCQCSS Trigger: ACTCGAGCACTGGCAGTCCCACCAGCATTGACAAGA...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	AAAAACACTGCTTGGAAATGGCAGTATTACATAATCACATCCGCAGCACCCATTAGGGCGGTGACCCACTaGTGCGCGTGGCTCAGCATA	+
Preference number: 4 (lower is better) Translates to: KNTAWKWQYYIITSAAPIRAVTH*CAWLSI Trigger: TATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCT...AATGGGTGCTGCGGATGTGATTATGTAATACTGCCATTTCCAAGCAGTGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGGCTGGCCACCCGCCATaGACGGGAGGTGAGCGGCAG	+
Preference number: 4 (lower is better) Translates to: EFISYPSQLLIHKDRKRKAGHPP*TGGERQ Trigger: CTGCCGCTCACCTCCCGTCCATGGCGGGTGGCCAGC...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR TCA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGCGCACTAGCCCGGGGTaGACCAGGCTCTGGGCTCCA	+
Preference number: 4 (lower is better) Translates to: EFISYPSQLLIHKDRKRKRTSPG*TRLWAP Trigger: TGGAGCCCAGAGCCTGGTTCACCCCGGGCTAGTGCG...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GCAACTCCTTTTAGCAACCCTAGCCTGTTCTGGAGGTTTCAAACATACCTTTGCTGCATGAAGTCGCTCTaGACCATCTTGACCGAGGAC	+
Preference number: 4 (lower is better) Translates to: ATPFSNPSLFWRFQTYLCCMKSL*TILTED Trigger: GTCCTCGGTCAAGATGGTCCAGAGCGACTTCATGCA...GCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GCAACTCCTTTTAGCAACCCTAGCCTGTTCTGGAGGTTTCAAACATACCTTTGCTCTTGTCAATGCTGGTaGGACTGCCAGTGCTCGAGT	+
Preference number: 4 (lower is better) Translates to: ATPFSNPSLFWRFQTYLCSCQCW*DCQCSS Trigger: ACTCGAGCACTGGCAGTCCCACCAGCATTGACAAGA...GCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGGCGGCCATGGCCCCCTaGATGAAGTCGCTCTGGACC	+
Preference number: 4 (lower is better) Translates to: EFISYPSQLLIHKDRKRKAAMAP*MKSLWT Trigger: GGTCCAGAGCGACTTCATGCAGGGGGCCATGGCCGC...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGGAGTACAGCAGACTCTaGGGCGGCGGCTGCTGGCCA	+
Preference number: 4 (lower is better) Translates to: EFISYPSQLLIHKDRKRKEYSRL*GGGCWP Trigger: TGGCCAGCAGCCGCCGCCGCAGAGTCTGCTGTACTC...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTCGATCTTGTCAATGCTaGTGGGACTGCCAGTGCTCG	+
Preference number: 4 (lower is better) Translates to: AYLLQSKTYSATHRSGLLRSCQC*WDCQCS Trigger: CGAGCACTGGCAGTCCCACCAGCATTGACAAGATCG...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	GCCTATCTTCTTCAATCAAAAACGTACTCTGCTACCCATAGATCTGGGCTTCTTTGCATGAAGTCGCTCTaGACCATCTTGACCGAGGAC	+
Preference number: 4 (lower is better) Translates to: AYLLQSKTYSATHRSGLLCMKSL*TILTED Trigger: GTCCTCGGTCAAGATGGTCCAGAGCGACTTCATGCA...AAGAAGCCCAGATCTATGGGTAGCAGAGTACGTTTTTGATTGAAGAAGATAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CCA 90 bp	ATTTCCAAGTTTACTGCGGAGGATGCTTTCTTTTGGCTTTCTTGTTCAGTCTGTCGATCTTGTCAATGCTaGTGGGACTGCCAGTGCTCG	+
Preference number: 4 (lower is better) Translates to: ISKFTAEDAFFWLSCSVCRSCQC*WDCQCS Trigger: CGAGCACTGGCAGTCCCACCAGCATTGACAAGATCG...ACAGACTGAACAAGAAAGCCAAAAGAAAGCATCCTCCGCAGTAAACTTGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR GCA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGCTGCGATCTTGTCAATaGTGGTGGGACTGCCAGTGC	+
Preference number: 4 (lower is better) Translates to: EFISYPSQLLIHKDRKRKLRSCQ*WWDCQC Trigger: GCACTGGCAGTCCCACCAGCATTGACAAGATCGCAG...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 72 bp	AATACATGGTTGTCTGGCTGGGCTCAATTTGTGCTATaGGGTCTGTCTGTGAGAAACTATTTCTTGTCCTCA	+
Preference number: 4 (lower is better) Translates to: NTWLSGWAQFVL*GLSVRNYFLSS Trigger: TGAGGACAAGAAATAGTTTCTCACAGACAGACCCAATAGCACAAATTGAGCCCAGCCAGACAACCATGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
3UTR CAA 72 bp	TTACTTTACACAACACACAATGACAAGCAAAACTGCTaGGTTTGCCTATCTTCTTCAATCAAAAACGTACTC	+
Preference number: 4 (lower is better) Translates to: LLYTTHNDKQNC*VCLSSSIKNVL Trigger: GAGTACGTTTTTGATTGAAGAAGATAGGCAAACCAAGCAGTTTTGCTTGTCATTGTGTGTTGTGTAAAGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS TCA 90 bp	GCGTGCAGGTCTTCGCGTCCAGCGCCTCCCTTCACGTCGGGGCCCTaGGGCGGCGGCGGCGGCGGCTGTGGCGGCTGCTGGGGGCTGCCG	+
Preference number: 5 (lower is better) Translates to: ACRSSRPAPPFTSGP*GGGGGGCGGCWGLP Trigger: CGGCAGCCCCCAGCAGCCGCCACAGCCGCCGCCGCCGCCGCCTCAGGGCCCCGACGTGAAGGGAGGCGCTGGACGCGAAGACCTGCACGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS GCA 90 bp	GCGGCGGCGGCGGCGGCTGTGGCGGCTGCTGGGGGCTGCCGGCCATaGCCACCGCACTGCCCGACCACGGTGAGCTGGCTTCCACGGCAG	+
Preference number: 5 (lower is better) Translates to: AAAAAAVAAAGGCRP*PPHCPTTVSWLPRQ Trigger: CTGCCGTGGAAGCCAGCTCACCGTGGTCGGGCAGTGCGGTGGGCATGGCCGGCAGCCCCCAGCAGCCGCCACAGCCGCCGCCGCCGCCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS GCA 90 bp	GGCCCTGAGGCGGCGGCGGCGGCGGCTGTGGCGGCTGCTGGGGGCTaGCGGCCATGCCCACCGCACTGCCCGACCACGGTGAGCTGGCTT	+
Preference number: 5 (lower is better) Translates to: GPEAAAAAAVAAAGG*RPCPPHCPTTVSWL Trigger: AAGCCAGCTCACCGTGGTCGGGCAGTGCGGTGGGCATGGCCGGCAGCCCCCAGCAGCCGCCACAGCCGCCGCCGCCGCCGCCTCAGGGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CCA 90 bp	GGGGGCTGCCGGCCATGCCCACCGCACTGCCCGACCACGGTGAGCTaGCTTCCACGGCAGCGGCGGCAGCAGCGGCGGCAGCGGCGGCAG	+
Preference number: 5 (lower is better) Translates to: GGCRPCPPHCPTTVS*LPRQRRQQRRQRRQ Trigger: CTGCCGCCGCTGCCGCCGCTGCTGCCGCCGCTGCCGTGGAAGCCAGCTCACCGTGGTCGGGCAGTGCGGTGGGCATGGCCGGCAGCCCCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS TCA 90 bp	CTGCTGGGGGCTGCCGGCCATGCCCACCGCACTGCCCGACCACGGTaGGCTGGCTTCCACGGCAGCGGCGGCAGCAGCGGCGGCAGCGGC	+
Preference number: 5 (lower is better) Translates to: LLGAAGHAHRTARPR*AGFHGSGGSSGGSG Trigger: GCCGCTGCCGCCGCTGCTGCCGCCGCTGCCGTGGAAGCCAGCTCACCGTGGTCGGGCAGTGCGGTGGGCATGGCCGGCAGCCCCCAGCAG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CCA 90 bp	GCGAGTACAGCAGACTCTGCGGCGGCGGCTGCTGGCCACCCGCCATaGACGGGAGGTGAGCGGCAGCGGCGGCGGCTGCGGCGGCAGCGG	+
Preference number: 5 (lower is better) Translates to: ASTADSAAAAAGHPP*TGGERQRRRLRRQR Trigger: CCGCTGCCGCCGCAGCCGCCGCCGCTGCCGCTCACCTCCCGTCCATGGCGGGTGGCCAGCAGCCGCCGCCGCAGAGTCTGCTGTACTCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS TCA 90 bp	CGGCGGCAGCAGCGGCGGCAGCGGCGGCAGCGTGGGGCAGGGCGGTaGCCCACTGGTGCGCGTGGCTCAGCATATGGCCGCCGTTGCTGG	+
Preference number: 5 (lower is better) Translates to: RRQQRRQRRQRGAGR*PTGARGSAYGRRCW Trigger: CCAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCTGCCCCACGCTGCCGCCGCTGCCGCCGCTGCTGCCGCCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CCA 90 bp	GCAGCGGCGGCAGCGTGGGGCAGGGCGGTGACCCACTGGTGCGCGTaGCTCAGCATATGGCCGCCGTTGCTGGCGGCCATGGCCCCCTGC	+
Preference number: 5 (lower is better) Translates to: AAAAAWGRAVTHWCA*LSIWPPLLAAMAPC Trigger: GCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCTGCCCCACGCTGCCGCCGCTGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CCA 90 bp	GCTTCCACGGCAGCGGCGGCAGCAGCGGCGGCAGCGGCGGCAGCGTaGGGCAGGGCGGTGACCCACTGGTGCGCGTGGCTCAGCATATGG	+
Preference number: 5 (lower is better) Translates to: ASTAAAAAAAAAAAA*GRAVTHWCAWLSIW Trigger: CCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCTGCCCCACGCTGCCGCCGCTGCCGCCGCTGCTGCCGCCGCTGCCGTGGAAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CCA 90 bp	GCGTGGGGCAGGGCGGTGACCCACTGGTGCGCGTGGCTCAGCATATaGCCGCCGTTGCTGGCGGCCATGGCCCCCTGCATGAAGTCGCTC	+
Preference number: 5 (lower is better) Translates to: AWGRAVTHWCAWLSI*PPLLAAMAPCMKSL Trigger: GAGCGACTTCATGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCTGCCCCACGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS GCA 90 bp	GCGTGGCTCAGCATATGGCCGCCGTTGCTGGCGGCCATGGCCCCCTaGATGAAGTCGCTCTGGACCATCTTGACCGAGGACGGGTCCCCC	+
Preference number: 5 (lower is better) Translates to: AWLSIWPPLLAAMAP*MKSLWTILTEDGSP Trigger: GGGGGACCCGTCCTCGGTCAAGATGGTCCAGAGCGACTTCATGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CAA 90 bp	ACACTGGAGGCCAGGAAGAAGCAGAGGGAGTCTCTAAGATCAATGAGAGAGAGATCGCTCTGGACCATCTaGACCGAGGACGGGTCCCCC	+
Preference number: 5 (lower is better) Translates to: TLEARKKQRESLRSMRERSLWTI*TEDGSP Trigger: GGGGGACCCGTCCTCGGTCAAGATGGTCCAGAGCGA...TCTCTCTCTCATTGATCTTAGAGACTCCCTCTGCTTCTTCCTGGCCTCCAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CAA 90 bp	GCAACTCCTTTTAGCAACCCTAGCCTGTTCTGGAGGTTTCAAACATACCTTTGCAGGCTGTCGGCCAAGTaGGTGATTTCCTGCGCCGAG	+
Preference number: 5 (lower is better) Translates to: ATPFSNPSLFWRFQTYLCRLSAK*VISCAE Trigger: CTCGGCGCAGGAAATCACCAACTTGGCCGACAGCCT...GCAAAGGTATGTTTGAAACCTCCAGAACAGGCTAGGGTTGCTAAAAGGAGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CAA 90 bp	TCAACCAATCAGAGCCTTTCTCCTCTTTATCTCTCATACCCTGAGGTGTTGTATAGGCTGTCGGCCAAGTaGGTGATTTCCTGCGCCGAG	+
Preference number: 5 (lower is better) Translates to: STNQSLSPLYLSYPEVLYRLSAK*VISCAE Trigger: CTCGGCGCAGGAAATCACCAACTTGGCCGACAGCCT...ATACAACACCTCAGGGTATGAGAGATAAAGAGGAGAAAGGCTCTGATTGGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS-3UTR CAA 90 bp	GAATTTATAAGCTATCCTTCGCAACTATTGATCCACAAAGACAGAAAGAGAAAGTCGCTCTGGACCATCTaGACCGAGGACGGGTCCCCC	+
Preference number: 5 (lower is better) Translates to: EFISYPSQLLIHKDRKRKSLWTI*TEDGSP Trigger: GGGGGACCCGTCCTCGGTCAAGATGGTCCAGAGCGA...CTTTCTCTTTCTGTCTTTGTGGATCAATAGTTGCGAAGGATAGCTTATAAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS TCA 72 bp	GGCGGCGGCGGGGGCCCGAGGTGCGGCGGTCCGCGGTaGTGCAGCGCGGTACCGGCGTGCAGGTCTTCGCGT	+
Preference number: 6 (lower is better) Translates to: GGGGGPRCGGPR*CSAVPACRSSR Trigger: ACGCGAAGACCTGCACGCCGGTACCGCGCTGCATCACCGCGGACCGCCGCACCTCGGGCCCCCGCCGCCGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS TCA 72 bp	TCTTCGCGTCCAGCGCCTCCCTTCACGTCGGGGCCCTaGGGCGGCGGCGGCGGCGGCTGTGGCGGCTGCTGG	+
Preference number: 6 (lower is better) Translates to: SSRPAPPFTSGP*GGGGGGCGGCW Trigger: CCAGCAGCCGCCACAGCCGCCGCCGCCGCCGCCTCAGGGCCCCGACGTGAAGGGAGGCGCTGGACGCGAAGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS TCA 72 bp	GCTGCCGGCCATGCCCACCGCACTGCCCGACCACGGTaGGCTGGCTTCCACGGCAGCGGCGGCAGCAGCGGC	+
Preference number: 6 (lower is better) Translates to: AAGHAHRTARPR*AGFHGSGGSSG Trigger: GCCGCTGCTGCCGCCGCTGCCGTGGAAGCCAGCTCACCGTGGTCGGGCAGTGCGGTGGGCATGGCCGGCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS GCA 72 bp	GCGGCGGCTGTGGCGGCTGCTGGGGGCTGCCGGCCATaGCCACCGCACTGCCCGACCACGGTGAGCTGGCTT	+
Preference number: 6 (lower is better) Translates to: AAAVAAAGGCRP*PPHCPTTVSWL Trigger: AAGCCAGCTCACCGTGGTCGGGCAGTGCGGTGGGCATGGCCGGCAGCCCCCAGCAGCCGCCACAGCCGCCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS GCA 72 bp	GCGGCGGCAGCGTGGGGCAGGGCGGTGACCCACTGGTaGGCGTGGCTCAGCATATGGCCGCCGTTGCTGGCG	+
Preference number: 6 (lower is better) Translates to: AAAAWGRAVTHW*AWLSIWPPLLA Trigger: CGCCAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCTGCCCCACGCTGCCGCCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CCA 72 bp	GCAGCGGCGGCAGCGTGGGGCAGGGCGGTGACCCACTaGTGCGCGTGGCTCAGCATATGGCCGCCGTTGCTG	+
Preference number: 6 (lower is better) Translates to: AAAAAWGRAVTH*CAWLSIWPPLL Trigger: CAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCTGCCCCACGCTGCCGCCGCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CCA 72 bp	GCAGCGTGGGGCAGGGCGGTGACCCACTGGTGCGCGTaGCTCAGCATATGGCCGCCGTTGCTGGCGGCCATG	+
Preference number: 6 (lower is better) Translates to: AAWGRAVTHWCA*LSIWPPLLAAM Trigger: CATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCTGCCCCACGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CCA 72 bp	AGGGCGGTGACCCACTGGTGCGCGTGGCTCAGCATATaGCCGCCGTTGCTGGCGGCCATGGCCCCCTGCATG	+
Preference number: 6 (lower is better) Translates to: RAVTHWCAWLSI*PPLLAAMAPCM Trigger: CATGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CAA 90 bp	AGGGCGGTGACCCACTGGTGCGCGTGGCTCAGCATATGGCCGCCGTaGCTGGCGGCCATGGCCCCCTGCATGAAGTCGCTCTGGACCATC	+
Preference number: 6 (lower is better) Translates to: RAVTHWCAWLSIWPP*LAAMAPCMKSLWTI Trigger: GATGGTCCAGAGCGACTTCATGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGTCACCGCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS CAA 72 bp	ACCCACTGGTGCGCGTGGCTCAGCATATGGCCGCCGTaGCTGGCGGCCATGGCCCCCTGCATGAAGTCGCTC	+
Preference number: 6 (lower is better) Translates to: THWCAWLSIWPP*LAAMAPCMKSL Trigger: GAGCGACTTCATGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACGCGCACCAGTGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2
CDS GCA 72 bp	AGCATATGGCCGCCGTTGCTGGCGGCCATGGCCCCCTaGATGAAGTCGCTCTGGACCATCTTGACCGAGGAC	+
Preference number: 6 (lower is better) Translates to: SIWPPLLAAMAP*MKSLWTILTED Trigger: GTCCTCGGTCAAGATGGTCCAGAGCGACTTCATGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054883.4 ENSMUST00000239323.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu