Pregenerated sensors for POU3F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095139Ensembl transcript IDs: ENSMUST00000178174.3
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAATGCCTTCTCAAGGTCTGTCCAAACGCCCTGCAGAGGGCGGATaGAGCTCGCTTTCCTCCTTCAGAGGAGGGATATTGACCCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: KMPSQGLSKRPAEGG*SSLSSFRGGILTQN Trigger: GTTCTGGGTCAATATCCCTCCTCTGAAGGAGGAAAGCGAGCTGCATCCGCCCTCTGCAGGGCGTTTGGACAGACCTTGAGAAGGCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR GCA 90 bp | GTGGCTAAGAACAAAAATGCCTTCTCAAGGTCTGTCCAAACGCCCTaGAGAGGGCGGATGCAGCTCGCTTTCCTCCTTCAGAGGAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: VAKNKNAFSRSVQTP*RGRMQLAFLLQRRD Trigger: ATCCCTCCTCTGAAGGAGGAAAGCGAGCTGCATCCGCCCTCTGCAGGGCGTTTGGACAGACCTTGAGAAGGCATTTTTGTTCTTAGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR TCA 90 bp | GAAGGCCAGTCCCCACACATCAGGAACAAGCAGTGTGATATAACCTaGAATAGCTCTATGGCATCTCCTGTGACATTCATTGGGGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: EGQSPHIRNKQCDIT*NSSMASPVTFIGGN Trigger: ATTTCCCCCAATGAATGTCACAGGAGATGCCATAGAGCTATTTCAGGTTATATCACACTGCTTGTTCCTGATGTGTGGGGACTGGCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR GCA 90 bp | ACTTGGTATCTGCACATTCATTTCCTCCTTTTACCATTGGCTATTTaGCCTTCTCTGGATTGCTTCACTGAAGGCCAGTCCCCACACATC | + |
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Preference number: 1 (lower is better) Translates to: TWYLHIHFLLLPLAI*PSLDCFTEGQSPHI Trigger: GATGTGTGGGGACTGGCCTTCAGTGAAGCAATCCAGAGAAGGGCAAATAGCCAATGGTAAAAGGAGGAAATGAATGTGCAGATACCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR GCA 90 bp | AGAGCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTaGACATTCATTTCCTCCTTTTACCATTGGCTATTTGCCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: RARENPSFGPYLLGI*TFISSFYHWLFALL Trigger: GAGAAGGGCAAATAGCCAATGGTAAAAGGAGGAAATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CCA 90 bp | CCTTACCTACTTGGTATCTGCACATTCATTTCCTCCTTTTACCATTaGCTATTTGCCCTTCTCTGGATTGCTTCACTGAAGGCCAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: PYLLGICTFISSFYH*LFALLWIASLKASP Trigger: GGGACTGGCCTTCAGTGAAGCAATCCAGAGAAGGGCAAATAGCCAATGGTAAAAGGAGGAAATGAATGTGCAGATACCAAGTAGGTAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR GCA 90 bp | AGTTTACTTTGTGGTTTTCAAAAACCGATGATCAACACTTTGCCTTaGATAAAGCGGGCAAACCAAACACATTTCCTGAATGCCAACATT | + |
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Preference number: 1 (lower is better) Translates to: SLLCGFQKPMINTLP*IKRANQTHFLNANI Trigger: AATGTTGGCATTCAGGAAATGTGTTTGGTTTGCCCGCTTTATGCAAGGCAAAGTGTTGATCATCGGTTTTTGAAAACCACAAAGTAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR TCA 90 bp | TTGTTTGTTTGTTGTTTTAGGTGCAGAGCTCTATCTAAAACCTTCTaGAACAAACCATTCCCACCATGGCTTGAATCTCTCCAATACATT | + |
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Preference number: 1 (lower is better) Translates to: LFVCCFRCRALSKTF*NKPFPPWLESLQYI Trigger: AATGTATTGGAGAGATTCAAGCCATGGTGGGAATGGTTTGTTTCAGAAGGTTTTAGATAGAGCTCTGCACCTAAAACAACAAACAAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCATTAGGGTGGCCAAGAGCTaGCTTCTGTCCTCTCCACTG | + |
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Preference number: 2 (lower is better) Translates to: ARENPSFGPYLLGICTFIRVAKS*LLSSPL Trigger: CAGTGGAGAGGACAGAAGCCAGCTCTTGGCCACCCT...AATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCATTACTGGGAATGGAGGGTaGCCAAGAGCTGGCTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ARENPSFGPYLLGICTFITGNGG*PRAGFC Trigger: ACAGAAGCCAGCTCTTGGCCACCCTCCATTCCCAGT...AATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCATTGGGACATCAGAACACTaGGAATGGAGGGTGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ARENPSFGPYLLGICTFIGTSEH*EWRVAK Trigger: CTTGGCCACCCTCCATTCCCAGTGTTCTGATGTCCC...AATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CCA 90 bp | TTAAACCCAAAGGCAGAGAACTACACTGTGTGTTTCCAAGTTCTCAGAGTTCTATCCCAGGAAAGACTGTaGACCAAAGGGGAGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LNPKAENYTVCFQVLRVLSQERL*TKGEGS Trigger: GCTCCCCTCCCCTTTGGTCCACAGTCTTTCCTGGGA...TAGAACTCTGAGAACTTGGAAACACACAGTGTAGTTCTCTGCCTTTGGGTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTGCCCTTCTCTGGATTGCTTCACTGAAGGCCAGTCCCCACACATCAGGAACGTCAACTTTGAGCATTaGGAAGCTGCAGTTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ICPSLDCFTEGQSPHIRNVNFEH*EAAVLC Trigger: ACACAAAACTGCAGCTTCCCAATGCTCAAAGTTGAC...GTTCCTGATGTGTGGGGACTGGCCTTCAGTGAAGCAATCCAGAGAAGGGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CAA 90 bp | ACCTTACCTACTTGGTATCTGCACATTCATTTCCTCCTTTTACCATaGGCTATTTGCCCTTCTCTGGATTGCTTCACTGAAGGCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: TLPTWYLHIHFLLLP*AICPSLDCFTEGQS Trigger: GGACTGGCCTTCAGTGAAGCAATCCAGAGAAGGGCAAATAGCCAATGGTAAAAGGAGGAAATGAATGTGCAGATACCAAGTAGGTAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CAA 90 bp | AGCCTAAGAGAGCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTaGGTATCTGCACATTCATTTCCTCCTTTTACCATTGGCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: SLREQERTPASDLTY*VSAHSFPPFTIGYL Trigger: CAAATAGCCAATGGTAAAAGGAGGAAATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGCTCTCTTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCATAGCGCCTGTGGCTAAGAACAAAAATGCCTTCTCAAGGTCTGTCCAAAATTCTACAGGGTGGTaGAGAAAATATTTGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LFIAPVAKNKNAFSRSVQNSTGW*RKYLGP Trigger: GGGGCCCAAATATTTTCTTCACCACCCTGTAGAATT...TTGGACAGACCTTGAGAAGGCATTTTTGTTCTTAGCCACAGGCGCTATGAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR GCA 90 bp | TATCTAAAACCTTCTGAAACAAACCATTCCCACCATGGCTTGAATCTCTCCAATTGCCCTTCTCTGGATTaGTTCACTGAAGGCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: YLKPSETNHSHHGLNLSNCPSLD*FTEGQS Trigger: GGACTGGCCTTCAGTGAAGCAATCCAGAGAAGGGCA...ATTGGAGAGATTCAAGCCATGGTGGGAATGGTTTGTTTCAGAAGGTTTTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGCCAATAAGTGTTACACCAGGTCTGGGGGATCTGAAGAAAACAAAGTTCTTCTACTTCATTGCCTaGGTACTCTCGCCTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: KEPISVTPGLGDLKKTKFFYFIA*VLSPAK Trigger: CTTTGCAGGCGAGAGTACCCAGGCAATGAAGTAGAA...GAACTTTGTTTTCTTCAGATCCCCCAGACCTGGTGTAACACTTATTGGCTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCATAGCGCCTGTGGCTAAGAACAAAAATGCCTTCTCAAGGTCTGTCCAACCATCAGCATGTCTGTaGTCACAAAACACTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LFIAPVAKNKNAFSRSVQPSACL*SQNTSS Trigger: AGAAGAAGTGTTTTGTGACCACAGACATGCTGATGG...TTGGACAGACCTTGAGAAGGCATTTTTGTTCTTAGCCACAGGCGCTATGAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCATTATCATTTCGCTTTGGTaGAAAGAGCCAATAAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ARENPSFGPYLLGICTFIIISLW*KEPISV Trigger: AACACTTATTGGCTCTTTTCACCAAAGCGAAATGAT...AATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR GCA 90 bp | ATTAAACCCAAAGGCAGAGAACTACACTGTGTGTTTCCAAGTTCTCAGAGTTCTTTCATTCTACTTCATTaGCTGGGTACTCTCGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: IKPKGRELHCVFPSSQSSFILLH*LGTLAC Trigger: GCAGGCGAGAGTACCCAGGCAATGAAGTAGAATGAA...AGAACTCTGAGAACTTGGAAACACACAGTGTAGTTCTCTGCCTTTGGGTTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR TCA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTCAGGTCTGGGGGATCTaGAGAAAACAAAGTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DPELKSIPSLNILPISMSQVWGI*RKQSSG Trigger: TCCTGAACTTTGTTTTCTTCAGATCCCCCAGACCTG...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR GCA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTACCTTAACTACGGAGTaGAGTGCTAATCTGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: DPELKSIPSLNILPISMSTLTTE*SANLML Trigger: CAGCATCAGATTAGCACTGCACTCCGTAGTTAAGGT...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CAA 90 bp | GAGCTCTATCTAAAACCTTCTGAAACAAACCATTCCCACCATGGCTaGAATCTCTCCAATACATTCTTTCCCTCCTCTTTTATTGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: ELYLKPSETNHSHHG*NLSNTFFPSSFIVE Trigger: CTCTACAATAAAAGAGGAGGGAAAGAATGTATTGGAGAGATTCAAGCCATGGTGGGAATGGTTTGTTTCAGAAGGTTTTAGATAGAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CAA 90 bp | AAGTTTACTTTGTGGTTTTCAAAAACCGATGATCAACACTTTGCCTaGCATAAAGCGGGCAAACCAAACACATTTCCTGAATGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: KFTLWFSKTDDQHFA*HKAGKPNTFPECQH Trigger: ATGTTGGCATTCAGGAAATGTGTTTGGTTTGCCCGCTTTATGCAAGGCAAAGTGTTGATCATCGGTTTTTGAAAACCACAAAGTAAACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTTAAGAAACACAGTCTATGCATATGATGTCAAGTTCCCGGGTTATTTTCTTATTACACCTGCTACCTaGTATAGGATAGTCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: VLRNTVYAYDVKFPGYFLITPAT*YRIVQC Trigger: ACACTGGACTATCCTATATCAGGTAGCAGGTGTAAT...AAGAAAATAACCCGGGAACTTGACATCATATGCATAGACTGTGTTTCTTAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTCAGTGTGATATAACCTaGAATAGCTCTATGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: LQRRDIDPELKSIPSLNIQCDIT*NSSMAS Trigger: AGATGCCATAGAGCTATTTCAGGTTATATCACACTG...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR TCA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTGAAATAAATATACATTaGGGCAGGCCACGTAAAACG | + |
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Preference number: 2 (lower is better) Translates to: DPELKSIPSLNILPISMSEINIH*GRPRKT Trigger: CGTTTTACGTGGCCTGCCTCAATGTATATTTATTTC...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAAACAAATTGAAGCTGAAACCCAATGACTCCTTTGATTTAATTCTACAGTCCTCCTTTTACCATTaGCTATTTGCCCTTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: MANKLKLKPNDSFDLILQSSFYH*LFALLW Trigger: CCAGAGAAGGGCAAATAGCCAATGGTAAAAGGAGGA...CTGTAGAATTAAATCAAAGGAGTCATTGGGTTTCAGCTTCAATTTGTTTGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CAA 90 bp | CAAGGCAAGTATGTTTATTCGTTTGTTCAGGAAATGGCAAACAAATaGAAGCTGAAACCCAATGACTCCTTTGATTTAATTCTACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: QGKYVYSFVQEMANK*KLKPNDSFDLILQG Trigger: ACCCTGTAGAATTAAATCAAAGGAGTCATTGGGTTTCAGCTTCAATTTGTTTGCCATTTCCTGAACAAACGAATAAACATACTTGCCTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR GCA 72 bp | TCTCAAGGTCTGTCCAAACGCCCTGCAGAGGGCGGATaGAGCTCGCTTTCCTCCTTCAGAGGAGGGATATTG | + |
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Preference number: 3 (lower is better) Translates to: SQGLSKRPAEGG*SSLSSFRGGIL Trigger: CAATATCCCTCCTCTGAAGGAGGAAAGCGAGCTGCATCCGCCCTCTGCAGGGCGTTTGGACAGACCTTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR GCA 72 bp | AACAAAAATGCCTTCTCAAGGTCTGTCCAAACGCCCTaGAGAGGGCGGATGCAGCTCGCTTTCCTCCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: NKNAFSRSVQTP*RGRMQLAFLLQ Trigger: CTGAAGGAGGAAAGCGAGCTGCATCCGCCCTCTGCAGGGCGTTTGGACAGACCTTGAGAAGGCATTTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CAA 90 bp | GAGAGCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCAGCACGTGTCAACTTaGAGCATTGGGAAGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: ESKREPQLRTLPTWYLHIQHVST*SIGKLQ Trigger: CTGCAGCTTCCCAATGCTCAAAGTTGACACGTGCTG...AATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR TCA 72 bp | ACCATTGGCTATTTGCCCTTCTCTGGATTGCTTCACTaGAGGCCAGTCCCCACACATCAGGAACAAGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: TIGYLPFSGLLH*RPVPTHQEQAV Trigger: CACTGCTTGTTCCTGATGTGTGGGGACTGGCCTTCAGTGAAGCAATCCAGAGAAGGGCAAATAGCCAATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CCA 72 bp | TTCCTCAACAACCCATTGGCAAAGGTGCGGCTAACCTaGGGAAAAGGCATAGGGACCTGGGCATGTATTTAT | + |
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Preference number: 3 (lower is better) Translates to: FLNNPLAKVRLT*GKGIGTWACIY Trigger: ATAAATACATGCCCAGGTCCCTATGCCTTTTCCCCAGGTTAGCCGCACCTTTGCCAATGGGTTGTTGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCATAGCGCCTGTGGCTAAGAACAAAAATGCCTTCTCAAGGTCTGTCCAAATTCATTCTACTTCATaGCCTGGGTACTCTCGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LFIAPVAKNKNAFSRSVQIHSTS*PGYSRL Trigger: CAGGCGAGAGTACCCAGGCAATGAAGTAGAATGAAT...TTGGACAGACCTTGAGAAGGCATTTTTGTTCTTAGCCACAGGCGCTATGAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CCA 72 bp | ATTTCCTCCTTTTACCATTGGCTATTTGCCCTTCTCTaGATTGCTTCACTGAAGGCCAGTCCCCACACATCA | + |
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Preference number: 3 (lower is better) Translates to: ISSFYHWLFALL*IASLKASPHTS Trigger: TGATGTGTGGGGACTGGCCTTCAGTGAAGCAATCCAGAGAAGGGCAAATAGCCAATGGTAAAAGGAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCATAGCGCCTGTGGCTAAGAACAAAAATGCCTTCTCAAGGTCTGTCCAAGAGCTTGTTGTTTGTTaGCCTGATGAGAGAGATACA | + |
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Preference number: 3 (lower is better) Translates to: LFIAPVAKNKNAFSRSVQELVVC*PDERDT Trigger: TGTATCTCTCTCATCAGGCAAACAAACAACAAGCTC...TTGGACAGACCTTGAGAAGGCATTTTTGTTCTTAGCCACAGGCGCTATGAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR GCA 72 bp | GAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTaGACATTCATTTCCTCCTTTTACCATTGGCTATTT | + |
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Preference number: 3 (lower is better) Translates to: ENPSFGPYLLGI*TFISSFYHWLF Trigger: AAATAGCCAATGGTAAAAGGAGGAAATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCTTGCATAAAGCGGGCAAACCAAACACATTTCCTGAATGCCAACATTTATGGGAAGCTGCAGTTTaGTGTGTGTGTGTGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: FALHKAGKPNTFPECQHLWEAAV*CVCVFS Trigger: AGAAAACACACACACACACAAAACTGCAGCTTCCCA...TAAATGTTGGCATTCAGGAAATGTGTTTGGTTTGCCCGCTTTATGCAAGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR TCA 72 bp | TGTTGTTTTAGGTGCAGAGCTCTATCTAAAACCTTCTaGAACAAACCATTCCCACCATGGCTTGAATCTCTC | + |
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Preference number: 3 (lower is better) Translates to: CCFRCRALSKTF*NKPFPPWLESL Trigger: GAGAGATTCAAGCCATGGTGGGAATGGTTTGTTTCAGAAGGTTTTAGATAGAGCTCTGCACCTAAAACAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR-3UTR CAA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTTCGGACCTTACCTACTaGGTATCTGCACATTCATTT | + |
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Preference number: 3 (lower is better) Translates to: DPELKSIPSLNILPISMSSDLTY*VSAHSF Trigger: AAATGAATGTGCAGATACCAAGTAGGTAAGGTCCGA...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR TCA 72 bp | TATTTATTTTGTGTGAAGCCAATCATTTCGCTTTGGTaGAAAGAGCCAATAAGTGTTACACCAGGTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: YLFCVKPIISLW*KEPISVTPGLG Trigger: CCCCAGACCTGGTGTAACACTTATTGGCTCTTTTCACCAAAGCGAAATGATTGGCTTCACACAAAATAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR GCA 72 bp | TGTGGTTTTCAAAAACCGATGATCAACACTTTGCCTTaGATAAAGCGGGCAAACCAAACACATTTCCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: CGFQKPMINTLP*IKRANQTHFLN Trigger: ATTCAGGAAATGTGTTTGGTTTGCCCGCTTTATGCAAGGCAAAGTGTTGATCATCGGTTTTTGAAAACCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| 3UTR CCA 72 bp | TTTTCTTACCTACACCTTCCAGAATATTCTATTGTGTaGGGAGTAAGCCATTTCCCATGTAGACAAGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: FSYLHLPEYSIV*GVSHFPCRQGK Trigger: TTTACCTTGTCTACATGGGAAATGGCTTACTCCCCACACAATAGAATATTCTGGAAGGTGTAGGTAAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR CCA 90 bp | GAGAGCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTTCCGAGTGCGGGTCGTaGTGCGCGCCTGGGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ESKREPQLRTLPTWYLHISECGS*CAPGWP Trigger: GGGCCACCCAGGCGCGCACCACGACCCGCACTCGGA...AATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR GCA 90 bp | GAGAGCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTAGCCGGCTGCCCTCCTaGGCCCAGCATGCCGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ESKREPQLRTLPTWYLHISRLPS*AQHAVH Trigger: GTGAACGGCATGCTGGGCGCAGGAGGGCAGCCGGCT...AATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR GCA 90 bp | GAGAGCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCACTGGACGGGCGTCTaGACCCCGTGGTGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESKREPQLRTLPTWYLHIHWTGV*TPWCGG Trigger: GCCACCACACCACGGGGTGCAGACGCCCGTCCAGTG...AATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCCTTCTCTGGATTGCTTCACTGAAGGCCAGTCCCCACACATCAGGAACGAGTGCGGATGCGGGTaGTGGTCTGCATGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICPSLDCFTEGQSPHIRNECGCG*WSAWCG Trigger: GCCACACCATGCAGACCACCACCCGCATCCGCACTC...GTTCCTGATGTGTGGGGACTGGCCTTCAGTGAAGCAATCCAGAGAAGGGCAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | CTGTTCATAGCGCCTGTGGCTAAGAACAAAAATGCCTTCTCAAGGTCTGTCCAATTGCTGCAGCGCTCCTaGCCCGTGCAGCTCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFIAPVAKNKNAFSRSVQLLQRS*PVQLVA Trigger: GGCGACGAGCTGCACGGGCCAGGAGCGCTGCAGCAA...TTGGACAGACCTTGAGAAGGCATTTTTGTTCTTAGCCACAGGCGCTATGAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR TCA 90 bp | GCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCATTGGGGCTGCCCGAGGATaGGTCTGCCTCTTCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ARENPSFGPYLLGICTFIGAARG*VCLFQP Trigger: TGGTTGGAAGAGGCAGACTCATCCTCGGGCAGCCCC...AATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCCAATAAGTGTTACACCAGGTCTGGGGGATCTGAAGAAAACAAAGTTCCTGCGCCCTGCTGCATaGCGCCAGGCGGCTCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEPISVTPGLGDLKKTKFLRPAA*RQAARH Trigger: ATGCCGAGCCGCCTGGCGGCATGCAGCAGGGCGCAG...GAACTTTGTTTTCTTCAGATCCCCCAGACCTGGTGTAACACTTATTGGCTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGACATCAGAACACTGGGAATGGAGGGTGGCCAAGAGCTGGCTTCTGTCTTTGCGCCCTTGCGCTaGGATCTTGTCTATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRDIRTLGMEGGQELASVFAPLR*DLVYAG Trigger: ACCAGCATAGACAAGATCGCAGCGCAAGGGCGCAAA...GACAGAAGCCAGCTCTTGGCCACCCTCCATTCCCAGTGTTCTGATGTCCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCATTGCCCGGGATGGTGGTTaGCAGCGTGGTGCACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARENPSFGPYLLGICTFIARDGG*QRGAPD Trigger: ATCTGGTGCACCACGCTGCCAACCACCATCCCGGGC...AATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | TTAAACCCAAAGGCAGAGAACTACACTGTGTGTTTCCAAGTTCTCAGAGTTCTAGCCCCGGGCCCGGGATaGTGGTTGGCAGCGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNPKAENYTVCFQVLRVLAPGPG*WLAAWC Trigger: GCACCACGCTGCCAACCACCATCCCGGGCCCGGGGC...TAGAACTCTGAGAACTTGGAAACACACAGTGTAGTTCTCTGCCTTTGGGTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | TTAAACCCAAAGGCAGAGAACTACACTGTGTGTTTCCAAGTTCTCAGAGTTCTATGGTGCGCGCCTGGGTaGCCCGGTGGGCCTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNPKAENYTVCFQVLRVLWCAPG*PGGPCG Trigger: CCCACAAGGCCCACCGGGCCACCCAGGCGCGCACCA...TAGAACTCTGAGAACTTGGAAACACACAGTGTAGTTCTCTGCCTTTGGGTTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTCTCGCGGTAGCCCCCTaGGCCCTGCTGCATGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQRRDIDPELKSIPSLNILAVAP*ALLHAA Trigger: GGCGGCATGCAGCAGGGCGCAGGGGGCTACCGCGAG...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTGGCCTAGGGGGCTGGTaGACCACGGGGAGCCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DPELKSIPSLNILPISMSGLGGW*TTGSRR Trigger: GCGACGGCTCCCCGTGGTCCACCAGCCCCCTAGGCC...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | TTAAACCCAAAGGCAGAGAACTACACTGTGTGTTTCCAAGTTCTCAGAGTTCTAGCTGGCCTAGGGGGCTaGTGGACCACGGGGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNPKAENYTVCFQVLRVLAGLGG*WTTGSR Trigger: ACGGCTCCCCGTGGTCCACCAGCCCCCTAGGCCAGC...TAGAACTCTGAGAACTTGGAAACACACAGTGTAGTTCTCTGCCTTTGGGTTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | TTAAACCCAAAGGCAGAGAACTACACTGTGTGTTTCCAAGTTCTCAGAGTTCTACCGGGCCCGGGATGGTaGTTGGCAGCGTGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LNPKAENYTVCFQVLRVLPGPGW*LAAWCT Trigger: GGTGCACCACGCTGCCAACCACCATCCCGGGCCCGG...TAGAACTCTGAGAACTTGGAAACACACAGTGTAGTTCTCTGCCTTTGGGTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | TTAAACCCAAAGGCAGAGAACTACACTGTGTGTTTCCAAGTTCTCAGAGTTCTATCCCTCAGGCCGTGGTaGTGCAGCCCAGCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNPKAENYTVCFQVLRVLSLRPW*CSPAGC Trigger: GCAGCCGGCTGGGCTGCACCACCACGGCCTGAGGGA...TAGAACTCTGAGAACTTGGAAACACACAGTGTAGTTCTCTGCCTTTGGGTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR TCA 90 bp | AAAGAGCCAATAAGTGTTACACCAGGTCTGGGGGATCTGAAGAAAACAAAGTTCACTGGTGAGCGTGGCTaGGCGGGTGCCCGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEPISVTPGLGDLKKTKFTGERG*AGARCS Trigger: AGAGCAACGGGCACCCGCTCAGCCACGCTCACCAGT...GAACTTTGTTTTCTTCAGATCCCCCAGACCTGGTGTAACACTTATTGGCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTTGCATAAAGCGGGCAAACCAAACACATTTCCTGAATGCCAACATTTACGTGGGACAGCGCGGTaGTCCACTGGTGAGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FALHKAGKPNTFPECQHLRGTAR*STGERG Trigger: GCCACGCTCACCAGTGGATCACCGCGCTGTCCCACG...TAAATGTTGGCATTCAGGAAATGTGTTTGGTTTGCCCGCTTTATGCAAGGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTTGCAGCCCAGCCGGCTaGCCTCCTGCGCCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: DPELKSIPSLNILPISMSCSPAG*PPAPSM Trigger: CATGCTGGGCGCAGGAGGGCAGCCGGCTGGGCTGCA...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | TATCTAAAACCTTCTGAAACAAACCATTCCCACCATGGCTTGAATCTCTCCAATCTCAGGCCGTGGTGGTaGAGCCCAGCCGGCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLKPSETNHSHHGLNLSNLRPWW*SPAGCP Trigger: AGGGCAGCCGGCTGGGCTGCACCACCACGGCCTGAG...ATTGGAGAGATTCAAGCCATGGTGGGAATGGTTTGTTTCAGAAGGTTTTAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGAGAACCCCAGCTTCGGACCTTACCTACTTGGTATCTGCACATTCATTAGAGCAAACCGCCGTTaGAAGCTCCCATGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARENPSFGPYLLGICTFIRANRR*KLPWRE Trigger: CTCCCTCCATGGGAGCTTCCAACGGCGGTTTGCTCT...AATGAATGTGCAGATACCAAGTAGGTAAGGTCCGAAGCTGGGGTTCTCTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCCAATAAGTGTTACACCAGGTCTGGGGGATCTGAAGAAAACAAAGTTCTGGTGTGGCTCATCGTaGGCGTCCCTCAGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEPISVTPGLGDLKKTKFWCGSS*ASLRPW Trigger: CCACGGCCTGAGGGACGCCCACGATGAGCCACACCA...GAACTTTGTTTTCTTCAGATCCCCCAGACCTGGTGTAACACTTATTGGCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTTCTTACCTACACCTTCCAGAATATTCTATTGTGTGGGGAGTAAGCCAGCCTTGTGGGGGAGGTaGCGGGGGCGGTTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FVFLPTPSRIFYCVGSKPALWGR*RGRLLV Trigger: CACCAGCAACCGCCCCCGCCACCTCCCCCACAAGGC...TGGCTTACTCCCCACACAATAGAATATTCTGGAAGGTGTAGGTAAGAAAACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTGCGGTGATCCACTGGTaGGCGTGGCTGAGCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQRRDIDPELKSIPSLNIAVIHW*AWLSGC Trigger: GCACCCGCTCAGCCACGCTCACCAGTGGATCACCGC...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTCCACCACCGAGGGCTTaGTGTCCGGCTGGCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQRRDIDPELKSIPSLNIPPPRA*CPAGLG Trigger: CCCTAGGCCAGCCGGACATCAAGCCCTCGGTGGTGG...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTTTTCTTACCTACACCTTCCAGAATATTCTATTGTGTGGGGAGTAAGCCATCGCCTCGGCCACCCTaGTGTACCACCACCGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVFLPTPSRIFYCVGSKPSPRPP*CTTTEG Trigger: GCCCTCGGTGGTGGTACAGCAGGGTGGCCGAGGCGA...TGGCTTACTCCCCACACAATAGAATATTCTGGAAGGTGTAGGTAAGAAAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTAAGAAACACAGTCTATGCATATGATGTCAAGTTCCCGGGTTATTTTCTTGGGAGGGAGGTGAGCTaGAGCCGCCGCACTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLRNTVYAYDVKFPGYFLGREVS*SRRTPP Trigger: TGGCGGAGTGCGGCGGCTGCAGCTCACCTCCCTCCC...AAGAAAATAACCCGGGAACTTGACATCATATGCATAGACTGTGTTTCTTAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | ATGGCAAACAAATTGAAGCTGAAACCCAATGACTCCTTTGATTTAATTCTACAGGTCGTGGTGCGCGCCTaGGTGGCCCGGTGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MANKLKLKPNDSFDLILQVVVRA*VARWAL Trigger: CAAGGCCCACCGGGCCACCCAGGCGCGCACCACGAC...CTGTAGAATTAAATCAAAGGAGTCATTGGGTTTCAGCTTCAATTTGTTTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTTCTTACCTACACCTTCCAGAATATTCTATTGTGTGGGGAGTAAGCCACACCCCGTGGTGTGGTaGCGTGTCCCTACTACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FVFLPTPSRIFYCVGSKPHPVVW*RVPTTP Trigger: GGGGGTAGTAGGGACACGCCACCACACCACGGGGTG...TGGCTTACTCCCCACACAATAGAATATTCTGGAAGGTGTAGGTAAGAAAACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTGGCGTCTGCACCCCGTaGTGTGGTGGCGTGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: DPELKSIPSLNILPISMSGVCTP*CGGVSL Trigger: TAGGGACACGCCACCACACCACGGGGTGCAGACGCC...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTGGGTGGTGGTCTGCATaGTGTGGCTCATCGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LQRRDIDPELKSIPSLNIGWWSA*CGSSWA Trigger: CGCCCACGATGAGCCACACCATGCAGACCACCACCC...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTCTGCACCCCGTGGTGTaGTGGCGTGTCCCTACTACC | + |
|
Preference number: 4 (lower is better) Translates to: LQRRDIDPELKSIPSLNILHPVV*WRVPTT Trigger: GGTAGTAGGGACACGCCACCACACCACGGGGTGCAG...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCCAATAAGTGTTACACCAGGTCTGGGGGATCTGAAGAAAACAAAGTTCTCCGCTTTTTCCGTTTaGGCCCTTGCGCTGCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KEPISVTPGLGDLKKTKFSAFSV*ALALRS Trigger: AGATCGCAGCGCAAGGGCGCAAACGGAAAAAGCGGA...GAACTTTGTTTTCTTCAGATCCCCCAGACCTGGTGTAACACTTATTGGCTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTTGGTGGTTGGCAGCGTaGTGCACCAGATGTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQRRDIDPELKSIPSLNIWWLAA*CTRCGG Trigger: ACCGCCACATCTGGTGCACCACGCTGCCAACCACCA...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTCGTTGGAAGCTCCCATaGAGGGAGGGAGGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQRRDIDPELKSIPSLNIRWKLP*REGGEL Trigger: CAGCTCACCTCCCTCCCTCCATGGGAGCTTCCAACG...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTATGCGGGTGGTGGTCTaGATGGTGTGGCTCATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPELKSIPSLNILPISMSMRVVV*MVWLIV Trigger: CACGATGAGCCACACCATGCAGACCACCACCCGCAT...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | GTGTTAAGAAACACAGTCTATGCATATGATGTCAAGTTCCCGGGTTATTTTCTTTGCGGATGCGGGTGGTaGTCTGCATGGTGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLRNTVYAYDVKFPGYFLCGCGW*SAWCGS Trigger: TGAGCCACACCATGCAGACCACCACCCGCATCCGCA...AAGAAAATAACCCGGGAACTTGACATCATATGCATAGACTGTGTTTCTTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | TTTGCCTTGCATAAAGCGGGCAAACCAAACACATTTCCTGAATGCCAACATTTACGCCAGCCCCACGTCTaGTTGAGTAAATCCGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FALHKAGKPNTFPECQHLRQPHV*LSKSEF Trigger: AAACTCGGATTTACTCAAGCAGACGTGGGGCTGGCG...TAAATGTTGGCATTCAGGAAATGTGTTTGGTTTGCCCGCTTTATGCAAGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR CCA 90 bp | GACCCAGAACTCAAATCTATACCTAGCTTAAACATTTTACCCATCAGCATGTCTTCTTGTCTATGCTGGTaGGGCTGCCCGAGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DPELKSIPSLNILPISMSSCLCW*GCPRMS Trigger: ACTCATCCTCGGGCAGCCCCACCAGCATAGACAAGA...AGACATGCTGATGGGTAAAATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTTTTCTTACCTACACCTTCCAGAATATTCTATTGTGTGGGGAGTAAGCCAAGCCCCACGTCTGCTTaGGTAAATCCGAGTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FVFLPTPSRIFYCVGSKPSPTSA*VNPSLI Trigger: GATCAAACTCGGATTTACTCAAGCAGACGTGGGGCT...TGGCTTACTCCCCACACAATAGAATATTCTGGAAGGTGTAGGTAAGAAAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTAAGAAACACAGTCTATGCATATGATGTCAAGTTCCCGGGTTATTTTCTTTTCCGTTTGCGCCCTTaGGCTGCGATCTTGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: VLRNTVYAYDVKFPGYFLFRLRP*AAILSM Trigger: CATAGACAAGATCGCAGCGCAAGGGCGCAAACGGAA...AAGAAAATAACCCGGGAACTTGACATCATATGCATAGACTGTGTTTCTTAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| 3UTR CAA 72 bp | TTGTGGTTTTCAAAAACCGATGATCAACACTTTGCCTaGCATAAAGCGGGCAAACCAAACACATTTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWFSKTDDQHFA*HKAGKPNTFPE Trigger: TTCAGGAAATGTGTTTGGTTTGCCCGCTTTATGCAAGGCAAAGTGTTGATCATCGGTTTTTGAAAACCACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| 3UTR CAA 72 bp | CCTACCCAGAAATACTGCCTGAAGATGAAGTTTACTTaGTGGTTTTCAAAAACCGATGATCAACACTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTQKYCLKMKFT*WFSKTDDQHFA Trigger: GGCAAAGTGTTGATCATCGGTTTTTGAAAACCACAAAGTAAACTTCATCTTCAGGCAGTATTTCTGGGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| 3UTR CAA 72 bp | CTAAAACCTTCTGAAACAAACCATTCCCACCATGGCTaGAATCTCTCCAATACATTCTTTCCCTCCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKPSETNHSHHG*NLSNTFFPSSF Trigger: AAAAGAGGAGGGAAAGAATGTATTGGAGAGATTCAAGCCATGGTGGGAATGGTTTGTTTCAGAAGGTTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS GCA 90 bp | GCCGTAGTCGCCCTGCACCAGGCTCTGCGCCTCGCGGTAGCCCCCTaGGCCCTGCTGCATGCCGCCAGGCGGCTCGGCATGTACGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVVALHQALRLAVAP*ALLHAARRLGMYDG Trigger: TCCATCGTACATGCCGAGCCGCCTGGCGGCATGCAGCAGGGCGCAGGGGGCTACCGCGAGGCGCAGAGCCTGGTGCAGGGCGACTACGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS GCA 90 bp | TGCTGCAGCGCTCCTGGCCCGTGCAGCTCGTCGCCTCGGCCACCCTaGTGTACCACCACCGAGGGCTTGATGTCCGGCTGGCCTAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CCSAPGPCSSSPRPP*CTTTEGLMSGWPRG Trigger: CCCCCTAGGCCAGCCGGACATCAAGCCCTCGGTGGTGGTACAGCAGGGTGGCCGAGGCGACGAGCTGCACGGGCCAGGAGCGCTGCAGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS CCA 90 bp | GCCCGGTGGGCCTTGTGGGGGAGGTGGCGGGGGCGGTTGCTGGTGTaGGTGAGAGTGCGGATGCGGGTGGTGGTCTGCATGGTGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARWALWGRWRGRLLV*VRVRMRVVVCMVWL Trigger: GAGCCACACCATGCAGACCACCACCCGCATCCGCACTCTCACCCACACCAGCAACCGCCCCCGCCACCTCCCCCACAAGGCCCACCGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
||
| CDS GCA 90 bp | GAGCAAACCGCCGTTGGAAGCTCCCATGGAGGGAGGGAGGTGAGCTaGAGCCGCCGCACTCCGCCATGCCCCGGGCCCGGGATGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EQTAVGSSHGGREVS*SRRTPPCPGPGMVV Trigger: AACCACCATCCCGGGCCCGGGGCATGGCGGAGTGCGGCGGCTGCAGCTCACCTCCCTCCCTCCATGGGAGCTTCCAACGGCGGTTTGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 90 bp | CTGCAGCCGCCGCACTCCGCCATGCCCCGGGCCCGGGATGGTGGTTaGCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTTGTTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LQPPHSAMPRARDGG*QRGAPDVAVAVVAA Trigger: AGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCCGGGCCCGGGGCATGGCGGAGTGCGGCGGCTGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 90 bp | GCCGCACTCCGCCATGCCCCGGGCCCGGGATGGTGGTTGGCAGCGTaGTGCACCAGATGTGGCGGTCGCTGTTGTTGCTGCTGCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: AALRHAPGPGWWLAA*CTRCGGRCCCCCCC Trigger: GCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCCGGGCCCGGGGCATGGCGGAGTGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 90 bp | GCACTCCGCCATGCCCCGGGCCCGGGATGGTGGTTGGCAGCGTGGTaGACCAGATGTGGCGGTCGCTGTTGTTGCTGCTGCTGTTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ALRHAPGPGWWLAAW*TRCGGRCCCCCCCC Trigger: GCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCCGGGCCCGGGGCATGGCGGAGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 90 bp | GGGCGGTTGCTGGTGTGGGTGAGAGTGCGGATGCGGGTGGTGGTCTaGATGGTGTGGCTCATCGTGGGCGTCCCTCAGGCCGTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GRLLVWVRVRMRVVV*MVWLIVGVPQAVVV Trigger: CACCACCACGGCCTGAGGGACGCCCACGATGAGCCACACCATGCAGACCACCACCCGCATCCGCACTCTCACCCACACCAGCAACCGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 90 bp | CTGGTGTGGGTGAGAGTGCGGATGCGGGTGGTGGTCTGCATGGTGTaGCTCATCGTGGGCGTCCCTCAGGCCGTGGTGGTGCAGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LVWVRVRMRVVVCMV*LIVGVPQAVVVQPS Trigger: GCTGGGCTGCACCACCACGGCCTGAGGGACGCCCACGATGAGCCACACCATGCAGACCACCACCCGCATCCGCACTCTCACCCACACCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 90 bp | TGCCCCGGGCCCGGGATGGTGGTTGGCAGCGTGGTGCACCAGATGTaGCGGTCGCTGTTGTTGCTGCTGCTGTTGCTGCTGCTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CPGPGMVVGSVVHQM*RSLLLLLLLLLLLL Trigger: CAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCCGGGCCCGGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 90 bp | CTGCTGCTGTTGCTGTTGCTGTTGATGCTGTTGCTGCAGCGCTCCTaGCCCGTGCAGCTCGTCGCCTCGGCCACCCTGCTGTACCACCAC | + |
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Preference number: 5 (lower is better) Translates to: LLLLLLLLMLLLQRS*PVQLVASATLLYHH Trigger: GTGGTGGTACAGCAGGGTGGCCGAGGCGACGAGCTGCACGGGCCAGGAGCGCTGCAGCAACAGCATCAACAGCAACAGCAACAGCAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS TCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTTGCTGTTaGTGCTGTTGCTGCAGCGCTCCTGGCCCGTGCAGCTCGTCGCCT | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CCCCSAPGPCSSSP Trigger: AGGCGACGAGCTGCACGGGCCAGGAGCGCTGCAGCAACAGCATCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 90 bp | TTGGCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTTGTTGCTGCTaGTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: LAAWCTRCGGRCCCC*CCCCCCCCCCCCCC Trigger: GCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 90 bp | TGGTTGGCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTTGTTGCTaGTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: WLAAWCTRCGGRCCC*CCCCCCCCCCCCCC Trigger: ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR CAA 90 bp | CTGTTCATAGCGCCTGTGGCTAAGAACAAAAATGCCTTCTCAAGGTCTGTCCAAACCACCACCGAGGGCTaGATGTCCGGCTGGCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: LFIAPVAKNKNAFSRSVQTTTEG*MSGWPR Trigger: CCTAGGCCAGCCGGACATCAAGCCCTCGGTGGTGGT...TTGGACAGACCTTGAGAAGGCATTTTTGTTCTTAGCCACAGGCGCTATGAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR CAA 90 bp | ACAAGGGACATCAGAACACTGGGAATGGAGGGTGGCCAAGAGCTGGCTTCTGTCTTTCCGTTTGCGCCCTaGCGCTGCGATCTTGTCTAT | + |
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Preference number: 5 (lower is better) Translates to: TRDIRTLGMEGGQELASVFPFAP*RCDLVY Trigger: ATAGACAAGATCGCAGCGCAAGGGCGCAAACGGAAA...GACAGAAGCCAGCTCTTGGCCACCCTCCATTCCCAGTGTTCTGATGTCCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR CAA 90 bp | CTTCAGAGGAGGGATATTGACCCAGAACTCAAATCTATACCTAGCTTAAACATTGGCCCGGGATGGTGGTaGGCAGCGTGGTGCACCAGA | + |
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Preference number: 5 (lower is better) Translates to: LQRRDIDPELKSIPSLNIGPGWW*AAWCTR Trigger: TCTGGTGCACCACGCTGCCAACCACCATCCCGGGCC...AATGTTTAAGCTAGGTATAGATTTGAGTTCTGGGTCAATATCCCTCCTCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR CAA 90 bp | ATTAAACCCAAAGGCAGAGAACTACACTGTGTGTTTCCAAGTTCTCAGAGTTCTGTCCGCTTTTTCCGTTaGCGCCCTTGCGCTGCGATC | + |
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Preference number: 5 (lower is better) Translates to: IKPKGRELHCVFPSSQSSVRFFR*RPCAAI Trigger: GATCGCAGCGCAAGGGCGCAAACGGAAAAAGCGGAC...AGAACTCTGAGAACTTGGAAACACACAGTGTAGTTCTCTGCCTTTGGGTTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR CAA 90 bp | GTGTTAAGAAACACAGTCTATGCATATGATGTCAAGTTCCCGGGTTATTTTCTTTTGCTGTTGATGCTGTaGCTGCAGCGCTCCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: VLRNTVYAYDVKFPGYFLLLLML*LQRSWP Trigger: GGGCCAGGAGCGCTGCAGCAACAGCATCAACAGCAA...AAGAAAATAACCCGGGAACTTGACATCATATGCATAGACTGTGTTTCTTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR CAA 90 bp | TTTGCCTTGCATAAAGCGGGCAAACCAAACACATTTCCTGAATGCCAACATTTAGCCTCTTCCAACCACTaGTTCAACAAAGGCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: FALHKAGKPNTFPECQHLASSNH*FNKGFS Trigger: GCTGAAGCCTTTGTTGAACAAGTGGTTGGAAGAGGC...TAAATGTTGGCATTCAGGAAATGTGTTTGGTTTGCCCGCTTTATGCAAGGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS-3UTR CAA 90 bp | TATCTAAAACCTTCTGAAACAAACCATTCCCACCATGGCTTGAATCTCTCCAATCAGCCCCACGTCTGCTaGAGTAAATCCGAGTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: YLKPSETNHSHHGLNLSNQPHVC*SKSEFD Trigger: ATCAAACTCGGATTTACTCAAGCAGACGTGGGGCTG...ATTGGAGAGATTCAAGCCATGGTGGGAATGGTTTGTTTCAGAAGGTTTTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 72 bp | TCCTCGTCCGAGTGCGGGTCGTGGTGCGCGCCTGGGTaGCCCGGTGGGCCTTGTGGGGGAGGTGGCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSSECGSWCAPG*PGGPCGGGGGG Trigger: GCCCCCGCCACCTCCCCCACAAGGCCCACCGGGCCACCCAGGCGCGCACCACGACCCGCACTCGGACGAGGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 72 bp | GCCCTGCACCAGGCTCTGCGCCTCGCGGTAGCCCCCTaGGCCCTGCTGCATGCCGCCAGGCGGCTCGGCATG | + |
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Preference number: 6 (lower is better) Translates to: ALHQALRLAVAP*ALLHAARRLGM Trigger: CATGCCGAGCCGCCTGGCGGCATGCAGCAGGGCGCAGGGGGCTACCGCGAGGCGCAGAGCCTGGTGCAGGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 72 bp | GCCGTTGGAAGCTCCCATGGAGGGAGGGAGGTGAGCTaGAGCCGCCGCACTCCGCCATGCCCCGGGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: AVGSSHGGREVS*SRRTPPCPGPG Trigger: CCCGGGCCCGGGGCATGGCGGAGTGCGGCGGCTGCAGCTCACCTCCCTCCCTCCATGGGAGCTTCCAACGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 72 bp | GCCGCCGCACTCCGCCATGCCCCGGGCCCGGGATGGTaGTTGGCAGCGTGGTGCACCAGATGTGGCGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: AAALRHAPGPGW*LAAWCTRCGGR Trigger: GCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCCGGGCCCGGGGCATGGCGGAGTGCGGCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS TCA 72 bp | CCGCCGCCGCCGTGGGACAGCGCGGTGATCCACTGGTaGGCGTGGCTGAGCGGGTGCCCGTTGCTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPPPWDSAVIHW*AWLSGCPLLCS Trigger: GCTGCAGAGCAACGGGCACCCGCTCAGCCACGCTCACCAGTGGATCACCGCGCTGTCCCACGGCGGCGGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 72 bp | TCTGCGCCTCGCGGTAGCCCCCTGCGCCCTGCTGCATaGCGCCAGGCGGCTCGGCATGTACGATGGAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SAPRGSPLRPAA*RQAARHVRWRR Trigger: GCGCCTCCATCGTACATGCCGAGCCGCCTGGCGGCATGCAGCAGGGCGCAGGGGGCTACCGCGAGGCGCAGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 72 bp | GCTCCTGGCCCGTGCAGCTCGTCGCCTCGGCCACCCTaGTGTACCACCACCGAGGGCTTGATGTCCGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: APGPCSSSPRPP*CTTTEGLMSGW Trigger: CCAGCCGGACATCAAGCCCTCGGTGGTGGTACAGCAGGGTGGCCGAGGCGACGAGCTGCACGGGCCAGGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 72 bp | CCGCACTCCGCCATGCCCCGGGCCCGGGATGGTGGTTaGCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: PHSAMPRARDGG*QRGAPDVAVAV Trigger: AACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCCGGGCCCGGGGCATGGCGGAGTGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 72 bp | CGCCATGCCCCGGGCCCGGGATGGTGGTTGGCAGCGTaGTGCACCAGATGTGGCGGTCGCTGTTGTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RHAPGPGWWLAA*CTRCGGRCCCC Trigger: GCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCCGGGCCCGGGGCATGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 72 bp | GGATGCGGGTGGTGGTCTGCATGGTGTGGCTCATCGTaGGCGTCCCTCAGGCCGTGGTGGTGCAGCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GCGWWSAWCGSS*ASLRPWWCSPA Trigger: GGCTGGGCTGCACCACCACGGCCTGAGGGACGCCCACGATGAGCCACACCATGCAGACCACCACCCGCATCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 72 bp | CATGCCCCGGGCCCGGGATGGTGGTTGGCAGCGTGGTaGACCAGATGTGGCGGTCGCTGTTGTTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: HAPGPGWWLAAW*TRCGGRCCCCC Trigger: GCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCCGGGCCCGGGGCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 72 bp | GTGAGAGTGCGGATGCGGGTGGTGGTCTGCATGGTGTaGCTCATCGTGGGCGTCCCTCAGGCCGTGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VRVRMRVVVCMV*LIVGVPQAVVV Trigger: CACCACCACGGCCTGAGGGACGCCCACGATGAGCCACACCATGCAGACCACCACCCGCATCCGCACTCTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CAA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTTGCTGTTGATGCTGTaGCTGCAGCGCTCCTGGCCCGTGCAGCTCGTCGCCTCGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: LLLLLLLLLLLLLML*LQRSWPVQLVASAT Trigger: GGTGGCCGAGGCGACGAGCTGCACGGGCCAGGAGCGCTGCAGCAACAGCATCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CCA 72 bp | GCTGCGAATAGAGCAAACCGCCGTTGGAAGCTCCCATaGAGGGAGGGAGGTGAGCTGCAGCCGCCGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: AANRANRRWKLP*REGGELQPPHS Trigger: GGAGTGCGGCGGCTGCAGCTCACCTCCCTCCCTCCATGGGAGCTTCCAACGGCGGTTTGCTCTATTCGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CAA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTTGCTGTaGATGCTGTTGCTGCAGCGCTCCTGGCCCGTGCAGCTCGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LLLLLLLLLLLLLLL*MLLLQRSWPVQLVA Trigger: GGCGACGAGCTGCACGGGCCAGGAGCGCTGCAGCAACAGCATCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 72 bp | GCGTGGTGCACCAGATGTGGCGGTCGCTGTTGTTGCTaGTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AWCTRCGGRCCC*CCCCCCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS GCA 72 bp | GCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTTGTTaGTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AAWCTRCGGRCC*CCCCCCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CAA 72 bp | CTGCTGCTGCTGCTGTTGCTGTTGCTGTTGATGCTGTaGCTGCAGCGCTCCTGGCCCGTGCAGCTCGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LLLLLLLLLLML*LQRSWPVQLVA Trigger: GGCGACGAGCTGCACGGGCCAGGAGCGCTGCAGCAACAGCATCAACAGCAACAGCAACAGCAGCAGCAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CAA 72 bp | GGCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTTGTaGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GSVVHQMWRSLL*LLLLLLLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CAA 90 bp | GGGATGGTGGTTGGCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTaGTTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GMVVGSVVHQMWRSL*LLLLLLLLLLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCATCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CAA 90 bp | ATGGTGGTTGGCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTTGTaGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: MVVGSVVHQMWRSLL*LLLLLLLLLLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAACCACCAT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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| CDS CAA 72 bp | GTTGGCAGCGTGGTGCACCAGATGTGGCGGTCGCTGTaGTTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VGSVVHQMWRSL*LLLLLLLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAGCGACCGCCACATCTGGTGCACCACGCTGCCAAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178174.3 |
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