Pregenerated sensors for POU3F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090125Ensembl transcript IDs: ENSMUST00000053491.9
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGGCGGGGAAGCAGTGGCCCGCGATGCGTGCTCGGTCTTGCGGGTaGAGATGCCCCTTCCCACCCGGGTGTGCGTGGGAGCGCAGACCC | + |
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Preference number: 1 (lower is better) Translates to: PAGKQWPAMRARSCG*RCPFPPGCAWERRP Trigger: GGGTCTGCGCTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCAAGACCGAGCACGCATCGCGGGCCACTGCTTCCCCGCCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR GCA 90 bp | GCGTGCTCGGTCTTGCGGGTGGAGATGCCCCTTCCCACCCGGGTGTaGGTGGGAGCGCAGACCCTCTCTGCTAGGCCAGGAACCGAGCCG | + |
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Preference number: 1 (lower is better) Translates to: ACSVLRVEMPLPTRV*VGAQTLSARPGTEP Trigger: CGGCTCGGTTCCTGGCCTAGCAGAGAGGGTCTGCGCTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCAAGACCGAGCACGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR GCA 90 bp | GGGAAGCAGTGGCCCGCGATGCGTGCTCGGTCTTGCGGGTGGAGATaGCCCTTCCCACCCGGGTGTGCGTGGGAGCGCAGACCCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: GKQWPAMRARSCGWR*PFPPGCAWERRPSL Trigger: CAGAGAGGGTCTGCGCTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCAAGACCGAGCACGCATCGCGGGCCACTGCTTCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR CCA 90 bp | GCTCGGTCTTGCGGGTGGAGATGCCCCTTCCCACCCGGGTGTGCGTaGGAGCGCAGACCCTCTCTGCTAGGCCAGGAACCGAGCCGAGGG | + |
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Preference number: 1 (lower is better) Translates to: ARSCGWRCPFPPGCA*ERRPSLLGQEPSRG Trigger: CCCTCGGCTCGGTTCCTGGCCTAGCAGAGAGGGTCTGCGCTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCAAGACCGAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR TCA 90 bp | TGGGGCGCGTCCAGGTGCGAGAGAAGAGGCGCGGAAAGAATAAAGTaGCAGCCCCCACCCGTGACCTGCAGGCTACAGGGAGTCCGCGCC | + |
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Preference number: 1 (lower is better) Translates to: WGASRCERRGAERIK*QPPPVTCRLQGVRA Trigger: GGCGCGGACTCCCTGTAGCCTGCAGGTCACGGGTGGGGGCTGTCACTTTATTCTTTCCGCGCCTCTTCTCTCGCACCTGGACGCGCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGACCCTCTCTGCTAGGCCAGGAACCGAGCCGAGGGCTCGGGTAAAACGAGACAGCCCCCACCCGTaGCCTGCAGGCTACAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AQTLSARPGTEPRARVKRDSPHP*PAGYRE Trigger: CTCCCTGTAGCCTGCAGGTCACGGGTGGGGGCTGTC...TCGTTTTACCCGAGCCCTCGGCTCGGTTCCTGGCCTAGCAGAGAGGGTCTGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTCTCTTCGTCCATTCTCCCGGGGAATCCCTAACCCCGCACCGCGTTACCTTCTGGATCTTCCGCTaGTCTCTCCCGGGACTCGGG | + |
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Preference number: 2 (lower is better) Translates to: SPLFVHSPGESLTPHRVTFWIFR*SLPGLG Trigger: CCCGAGTCCCGGGAGAGAGCAGCGGAAGATCCAGAA...GGTAACGCGGTGCGGGGTTAGGGATTCCCCGGGAGAATGGACGAAGAGAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGACCCTCTCTGCTAGGCCAGGAACCGAGCCGAGGGCTCGGGTAAAACGATTTGTTTTGCGTTCTTaGAGGAGGAGAGGGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: AQTLSARPGTEPRARVKRFVLRS*RRRGEE Trigger: CTCTTCCCCTCTCCTCCTTCAAGAACGCAAAACAAA...TCGTTTTACCCGAGCCCTCGGCTCGGTTCCTGGCCTAGCAGAGAGGGTCTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGCTTTGGCTATTTCCTGCTTTTATACACAGATGCGGCTCTCGCGGCCTCCCTGGGGCGCGTCCAGGTaGGAGAGAAGAGGCGCGGAA | + |
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Preference number: 2 (lower is better) Translates to: KALAISCFYTQMRLSRPPWGASR*ERRGAE Trigger: TTCCGCGCCTCTTCTCTCGCACCTGGACGCGCCCCA...GGGAGGCCGCGAGAGCCGCATCTGTGTATAAAAGCAGGAAATAGCCAAAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCGGTTTAGTCGGGCATACAAACCCTTTAGGATGGGGAGGGAGAACAACCCATCGCGGCCTCCCCTCTaGGGCCCCGATAAATACAGC | + |
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Preference number: 2 (lower is better) Translates to: FRFSRAYKPFRMGRENNPSRPPL*GPDKYS Trigger: GCTGTATTTATCGGGGCCCCAGAGGGGAGGCCGCGA...TGGGTTGTTCTCCCTCCCCATCCTAAAGGGTTTGTATGCCCGACTAAACCGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTTTGGCTATTTCCTGCTTTTATACACAGATGCGGCTCTCGCGGCCTCCCGCGGAAAGAATAAAGTaGCAGCCCCCACCCGTGACC | + |
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Preference number: 2 (lower is better) Translates to: KALAISCFYTQMRLSRPPAERIK*QPPPVT Trigger: GGTCACGGGTGGGGGCTGTCACTTTATTCTTTCCGC...GGGAGGCCGCGAGAGCCGCATCTGTGTATAAAAGCAGGAAATAGCCAAAGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR GCA 72 bp | GCAAGGCCCGGCGGGGAAGCAGTGGCCCGCGATGCGTaGTCGGTCTTGCGGGTGGAGATGCCCCTTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: ARPGGEAVARDA*SVLRVEMPLPT Trigger: GGTGGGAAGGGGCATCTCCACCCGCAAGACCGAGCACGCATCGCGGGCCACTGCTTCCCCGCCGGGCCTTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR CCA 72 bp | TGCGGGTGGAGATGCCCCTTCCCACCCGGGTGTGCGTaGGAGCGCAGACCCTCTCTGCTAGGCCAGGAACCG | + |
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Preference number: 3 (lower is better) Translates to: CGWRCPFPPGCA*ERRPSLLGQEP Trigger: CGGTTCCTGGCCTAGCAGAGAGGGTCTGCGCTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR CCA 72 bp | AAGCAGTGGCCCGCGATGCGTGCTCGGTCTTGCGGGTaGAGATGCCCCTTCCCACCCGGGTGTGCGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KQWPAMRARSCG*RCPFPPGCAWE Trigger: CTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCAAGACCGAGCACGCATCGCGGGCCACTGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR GCA 72 bp | GTCTTGCGGGTGGAGATGCCCCTTCCCACCCGGGTGTaGGTGGGAGCGCAGACCCTCTCTGCTAGGCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: VLRVEMPLPTRV*VGAQTLSARPG Trigger: TCCTGGCCTAGCAGAGAGGGTCTGCGCTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCAAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR GCA 72 bp | ACCTGCAGGCTACAGGGAGTCCGCGCCCGGGAGAGCTaGTGGGGACTCTCCTCTCTTCGTCCATTCTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: TCRLQGVRARES*WGLSSLRPFSR Trigger: CCGGGAGAATGGACGAAGAGAGGAGAGTCCCCAGCAGCTCTCCCGGGCGCGGACTCCCTGTAGCCTGCAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR CCA 72 bp | GGCGACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTaGAGAGAGGGGTCGGTCCCGGGTGTTTGGTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: GDTASRPPFAAR*REGSVPGVWFC Trigger: ACAAAACCAAACACCCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| 3UTR TCA 72 bp | TCCAGGTGCGAGAGAAGAGGCGCGGAAAGAATAAAGTaGCAGCCCCCACCCGTGACCTGCAGGCTACAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SRCERRGAERIK*QPPPVTCRLQG Trigger: TCCCTGTAGCCTGCAGGTCACGGGTGGGGGCTGTCACTTTATTCTTTCCGCGCCTCTTCTCTCGCACCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | AAAAGAGTCCAGGCCGCGCGCGCTAACTGCGCGCCGGAGGCACCGCTGCGCCGGTCGTGCAGTGCGTGGTaGAGGCCGGGTCCCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: KRVQAARANCAPEAPLRRSCSAW*RPGPAP Trigger: CGGCGCGGGACCCGGCCTGCACCACGCACTGCACGA...CCGGCGCAGCGGTGCCTCCGGCGCGCAGTTAGCGCGCGCGGCCTGGACTCTTTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | AAAAGAGTCCAGGCCGCGCGCGCTAACTGCGCGCCGGAGGCACCGCTGCGCCGGCGGGCGACGGCGACATaGCGGGGCCCAAGTGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: KRVQAARANCAPEAPLRRRATAT*RGPSGA Trigger: CGCACCACTTGGGCCCCGCCATGTCGCCGTCGCCCG...CCGGCGCAGCGGTGCCTCCGGCGCGCAGTTAGCGCGCGCGGCCTGGACTCTTTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGAGGGGCAAGGCCCGGCGGGGAAGCAGTGGCCCGCGATGCGTGCTCGGCCCAGGTGCGGTGGTaGCGACGGCTCCAGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RPGGARPGGEAVARDACSAQVRW*RRLQLC Trigger: GCACAGCTGGAGCCGTCGCCACCACCGCACCTGGGC...CGAGCACGCATCGCGGGCCACTGCTTCCCCGCCGGGCCTTGCCCCTCCTGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | AAAAGAGTCCAGGCCGCGCGCGCTAACTGCGCGCCGGAGGCACCGCTGCGCCGGGTGTGGTGGTGGTGGTaGTGCAGCGCGGCCGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: KRVQAARANCAPEAPLRRVWWWW*CSAAGG Trigger: CCCGCCGGCCGCGCTGCACCACCACCACCACCACAC...CCGGCGCAGCGGTGCCTCCGGCGCGCAGTTAGCGCGCGCGGCCTGGACTCTTTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | TGCTCTCTCCCGGGACTCGGGCGACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCGCTGTGCCGCCTTGTaGCCATGCCGCGCCCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: CSLPGLGRHSLSAAFRRSRCAAL*PCRARV Trigger: CACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCG...CGAGCGGCGAAAGGCGGCCGAGAGGCTGTGTCGCCCGAGTCCCGGGAGAGAGCA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | ACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGCCGTGTGCGCCCAGGTaGGGTGGTGGCGACGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TQPLGRLSPLAGERGRSRPCAPR*GGGDGS Trigger: GGAGCCGTCGCCACCACCGCACCTGGGCGCACACGG...CCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | TGCTCTCTCCCGGGACTCGGGCGACACAGCCTCTCGGCCGCCTTTCGCCGCTCGAAGGTGGCGACGCGCTaGCCCCGCCAGGCCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: CSLPGLGRHSLSAAFRRSKVATR*PRQAPA Trigger: AGCTGGGGCCTGGCGGGGGCAGCGCGTCGCCACCTT...CGAGCGGCGAAAGGCGGCCGAGAGGCTGTGTCGCCCGAGTCCCGGGAGAGAGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | ACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGGCCGTCCTCGTGCAGTaGGTGGTGCAGGCCGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TQPLGRLSPLAGERGRSRAVLVQ*VVQAGS Trigger: GGACCCGGCCTGCACCACGCACTGCACGAGGACGGC...CCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | ACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGCGGCCGCGGGGGTCATaGGCTTCTCCTTCTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TQPLGRLSPLAGERGRSRRPRGS*ASPSAA Trigger: GGCGGCAGAAGGAGAAGCGCATGACCCCCGCGGCCG...CCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | TGCTCTCTCCCGGGACTCGGGCGACACAGCCTCTCGGCCGCCTTTCGCCGCTCGTCCTCGTGCAGTGCGTaGTGCAGGCCGGGTCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: CSLPGLGRHSLSAAFRRSSSCSA*CRPGPA Trigger: CGCGGGACCCGGCCTGCACCACGCACTGCACGAGGA...CGAGCGGCGAAAGGCGGCCGAGAGGCTGTGTCGCCCGAGTCCCGGGAGAGAGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | GCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGGTGTTTCGTGGCCGTCCTCGTaGAGTGCGTGGTGCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ASRPPFAARWREGSVPGVSWPSS*SAWCRP Trigger: CGGCCTGCACCACGCACTGCACGAGGACGGCCACGA...AACACCCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | ACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGCGACGGCTCCAGCTGTaGCTCGTGGCCGTCCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TQPLGRLSPLAGERGRSRRRLQL*LVAVLV Trigger: CACGAGGACGGCCACGAGGCACAGCTGGAGCCGTCG...CCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | AGGCCAGGAGGGGCAAGGCCCGGCGGGGAAGCAGTGGCCCGCGATGCGTGCTCGCGTTACCGTAGAGGGTaGCCAGCGCCAGTCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: RPGGARPGGEAVARDACSRYRRG*PAPVPR Trigger: ACGTGGGACTGGCGCTGGGCACCCTCTACGGTAACG...CGAGCACGCATCGCGGGCCACTGCTTCCCCGCCGGGCCTTGCCCCTCCTGGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | GCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGGTGTTAGTGTGTGGTGGTGGTaGTGGTGCAGCGCGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: ASRPPFAARWREGSVPGVSVWWW*WCSAAG Trigger: GCCGGCCGCGCTGCACCACCACCACCACCACACACT...AACACCCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGAGGGGCAAGGCCCGGCGGGGAAGCAGTGGCCCGCGATGCGTGCTCGGCGCCCAGCCACTCGTaGTGCATCAGCTTCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: RPGGARPGGEAVARDACSAPSHS*CISFCT Trigger: AGTGCAGAAGCTGATGCACCACGAGTGGCTGGGCGC...CGAGCACGCATCGCGGGCCACTGCTTCCCCGCCGGGCCTTGCCCCTCCTGGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | ACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGTCCAGCTGTGCCTCGTaGCCGTCCTCGTGCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: TQPLGRLSPLAGERGRSRSSCAS*PSSCSA Trigger: CGCACTGCACGAGGACGGCCACGAGGCACAGCTGGA...CCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | ACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGAGGCCGGTGATCTCGTaGGCAGACGGCTTGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: TQPLGRLSPLAGERGRSRRPVIS*ADGLGH Trigger: GTGTCCCAAGCCGTCTGCGCACGAGATCACCGGCCT...CCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR TCA 90 bp | TGCGGGTGGAGATGCCCCTTCCCACCCGGGTGTGCGTGGGAGCGCAGACCCTCTTCTCGAGCGCGCCTTTaGCACCCACCTCGATGGACG | + |
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Preference number: 4 (lower is better) Translates to: CGWRCPFPPGCAWERRPSSRARL*HPPRWT Trigger: CGTCCATCGAGGTGGGTGTCAAAGGCGCGCTCGAGA...AGAGGGTCTGCGCTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | GCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGGTGTTCCTTCTGCCGCCGGTTaGAGAACCAGACACGCACCA | + |
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Preference number: 4 (lower is better) Translates to: ASRPPFAARWREGSVPGVPSAAG*RTRHAP Trigger: TGGTGCGTGTCTGGTTCTGCAACCGGCGGCAGAAGG...AACACCCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | TGCGGGTGGAGATGCCCCTTCCCACCCGGGTGTGCGTGGGAGCGCAGACCCTCTTCTTGTCCAGGTTGGTaGGGCTGCCGCTGGACGAGT | + |
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Preference number: 4 (lower is better) Translates to: CGWRCPFPPGCAWERRPSSCPGW*GCRWTS Trigger: ACTCGTCCAGCGGCAGCCCCACCAACCTGGACAAGA...AGAGGGTCTGCGCTCCCACGCACACCCGGGTGGGAAGGGGCATCTCCACCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | GCGCAGACCCTCTCTGCTAGGCCAGGAACCGAGCCGAGGGCTCGGGTAAAACGAATGGCGGGGCCCAAGTaGTGCGCTGTGCCGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: AQTLSARPGTEPRARVKRMAGPK*CAVPPC Trigger: ACAAGGCGGCACAGCGCACCACTTGGGCCCCGCCAT...TCGTTTTACCCGAGCCCTCGGCTCGGTTCCTGGCCTAGCAGAGAGGGTCTGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTCTTCGTCCATTCTCCCGGGGAATCCCTAACCCCGCACCGCGTTACCTGCGCCCAGGTGCGGTaGTGGCGACGGCTCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPLFVHSPGESLTPHRVTCAQVR*WRRLQL Trigger: CAGCTGGAGCCGTCGCCACCACCGCACCTGGGCGCA...GGTAACGCGGTGCGGGGTTAGGGATTCCCCGGGAGAATGGACGAAGAGAGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | ACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGGGACACTTGAGAAAGTaGCTCTCGAGCGCGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: TQPLGRLSPLAGERGRSRGHLRK*LSSAPL Trigger: CAAAGGCGCGCTCGAGAGCCACTTTCTCAAGTGTCC...CCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | TCTCCTCTCTTCGTCCATTCTCCCGGGGAATCCCTAACCCCGCACCGCGTTACCCAGGCCGCCCGCGTGTaGATGTCCGTGTGCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SPLFVHSPGESLTPHRVTQAARV*MSVCVS Trigger: GGACACGCACACGGACATGCACACGCGGGCGGCCTG...GGTAACGCGGTGCGGGGTTAGGGATTCCCCGGGAGAATGGACGAAGAGAGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR TCA 90 bp | GAGAGCTGCTGGGGACTCTCCTCTCTTCGTCCATTCTCCCGGGGAATCCCTAACCCCGTGGGTAGCCATTaGGGGTGCGCTAGGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: ESCWGLSSLRPFSRGIPNPVGSH*GCARPT Trigger: CGTGGGCCTAGCGCACCCTCAATGGCTACCCACGGG...GTTAGGGATTCCCCGGGAGAATGGACGAAGAGAGGAGAGTCCCCAGCAGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGCGCGGAAAGAATAAAGTGACAGCCCCCACCCGTGACCTGCAGGCTTGGGCCGCCCCTTGGTaGACCAGGCGGGCGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: EKRRGKNKVTAPTRDLQAWAAPW*TRRAWK Trigger: TTTCCACGCCCGCCTGGTGCACCAAGGGGCGGCCCA...AGCCTGCAGGTCACGGGTGGGGGCTGTCACTTTATTCTTTCCGCGCCTCTTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGCGCGGAAAGAATAAAGTGACAGCCCCCACCCGTGACCTGCAGGCTGTGTGCGTGTCCGTGTaGGCCCAGGTGCGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EKRRGKNKVTAPTRDLQAVCVSV*AQVRWW Trigger: CCACCACCGCACCTGGGCGCACACGGACACGCACAC...AGCCTGCAGGTCACGGGTGGGGGCTGTCACTTTATTCTTTCCGCGCCTCTTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CCA 90 bp | GAGAAGAGGCGCGGAAAGAATAAAGTGACAGCCCCCACCCGTGACCTGCAGGCTCATAAACGTCGTCCATaGGCGGGTGGCCCGCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: EKRRGKNKVTAPTRDLQAHKRRP*AGGPRR Trigger: CCGGCGCGGGCCACCCGCCCATGGACGACGTTTATG...AGCCTGCAGGTCACGGGTGGGGGCTGTCACTTTATTCTTTCCGCGCCTCTTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGCGCGGAAAGAATAAAGTGACAGCCCCCACCCGTGACCTGCAGGCTGCATCCTCGTCCGAGTaGTCGCCCACCGACGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: EKRRGKNKVTAPTRDLQAASSSE*SPTDEP Trigger: TGGCTCGTCGGTGGGCGAGCACTCGGACGAGGATGC...AGCCTGCAGGTCACGGGTGGGGGCTGTCACTTTATTCTTTCCGCGCCTCTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | GAGAGCTGCTGGGGACTCTCCTCTCTTCGTCCATTCTCCCGGGGAATCCCTAACTGGTGCATCAGCTTCTaGACTTCGCGGTACGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: ESCWGLSSLRPFSRGIPNWCISF*TSRYAA Trigger: GGCCGCGTACCGCGAAGTGCAGAAGCTGATGCACCA...GTTAGGGATTCCCCGGGAGAATGGACGAAGAGAGGAGAGTCCCCAGCAGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGAGGCGCGGAAAGAATAAAGTGACAGCCCCCACCCGTGACCTGCAGGCTCCCAGCCACTCGTGGTaGATCAGCTTCTGCACTTCG | + |
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Preference number: 4 (lower is better) Translates to: EKRRGKNKVTAPTRDLQAPSHSW*ISFCTS Trigger: CGAAGTGCAGAAGCTGATGCACCACGAGTGGCTGGG...AGCCTGCAGGTCACGGGTGGGGGCTGTCACTTTATTCTTTCCGCGCCTCTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | TTTCGGTTTAGTCGGGCATACAAACCCTTTAGGATGGGGAGGGAGAACAACCCAGCGGGGCCCAAGTGGTaGGCTGTGCCGCCTTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: FRFSRAYKPFRMGRENNPAGPKW*AVPPCA Trigger: GGCACAAGGCGGCACAGCGCACCACTTGGGCCCCGC...TGGGTTGTTCTCCCTCCCCATCCTAAAGGGTTTGTATGCCCGACTAAACCGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | AAAGCTTTGGCTATTTCCTGCTTTTATACACAGATGCGGCTCTCGCGGCCTCCCCCAAGTGGTGCGCTGTaGCGCCTTGTGCCCATGCCG | + |
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Preference number: 4 (lower is better) Translates to: KALAISCFYTQMRLSRPPPSGAL*RLVPMP Trigger: CGGCATGGGCACAAGGCGGCACAGCGCACCACTTGG...GGGAGGCCGCGAGAGCCGCATCTGTGTATAAAAGCAGGAAATAGCCAAAGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR GCA 90 bp | AAAGCTTTGGCTATTTCCTGCTTTTATACACAGATGCGGCTCTCGCGGCCTCCCCCAGGTTGGTGGGGCTaGCGCTGGACGAGTCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KALAISCFYTQMRLSRPPPGWWG*RWTSRS Trigger: AGACCGACTCGTCCAGCGGCAGCCCCACCAACCTGG...GGGAGGCCGCGAGAGCCGCATCTGTGTATAAAAGCAGGAAATAGCCAAAGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 90 bp | TGCTCGCCCACCGACGAGCCACCACCGCCCGCGCCCGGGTGCAGGTaGGCCGCCGCCGCGTGCAGGCCGCCCGCGTGTGCATGTCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: CSPTDEPPPPAPGCR*AAAACRPPACACPC Trigger: ACACGGACATGCACACGCGGGCGGCCTGCACGCGGCGGCGGCGCACCTGCACCCGGGCGCGGGCGGTGGTGGCTCGTCGGTGGGCGAGCA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 90 bp | CATGCCGCGCCCGCGTGGGCCGCCCCTTGGTGCACCAGGCGGGCGTaGAAACCGCCGCCACCGCCGCCGTCGTCAGCTCGGCCGGTACCG | + |
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Preference number: 5 (lower is better) Translates to: HAAPAWAAPWCTRRA*KPPPPPPSSARPVP Trigger: CGGTACCGGCCGAGCTGACGACGGCGGCGGTGGCGGCGGTTTCCACGCCCGCCTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 90 bp | GCTGTGCCGCCTTGTGCCCATGCCGCGCCCGCGTGGGCCGCCCCTTaGTGCACCAGGCGGGCGTGGAAACCGCCGCCACCGCCGCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: AVPPCAHAAPAWAAP*CTRRAWKPPPPPPS Trigger: CGACGGCGGCGGTGGCGGCGGTTTCCACGCCCGCCTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 90 bp | GGGTGGCCCGCGCCCGCGCCCAGCCACTCGTGGTGCATCAGCTTCTaGACTTCGCGGTACGCGGCCCCCGCGTGCAGCCGCTCGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: GWPAPAPSHSWCISF*TSRYAAPACSRSAA Trigger: GGCGGCCGAGCGGCTGCACGCGGGGGCCGCGTACCGCGAAGTGCAGAAGCTGATGCACCACGAGTGGCTGGGCGCGGGCGCGGGCCACCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 90 bp | GTGCCGCCTTGTGCCCATGCCGCGCCCGCGTGGGCCGCCCCTTGGTaGACCAGGCGGGCGTGGAAACCGCCGCCACCGCCGCCGTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: VPPCAHAAPAWAAPW*TRRAWKPPPPPPSS Trigger: TGACGACGGCGGCGGTGGCGGCGGTTTCCACGCCCGCCTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 90 bp | CGACATGGCGGGGCCCAAGTGGTGCGCTGTGCCGCCTTGTGCCCATaGCGCGCCCGCGTGGGCCGCCCCTTGGTGCACCAGGCGGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: RHGGAQVVRCAALCP*RARVGRPLVHQAGV Trigger: CACGCCCGCCTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGGCCCCGCCATGTCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 90 bp | CGACGGCGACATGGCGGGGCCCAAGTGGTGCGCTGTGCCGCCTTGTaGCCATGCCGCGCCCGCGTGGGCCGCCCCTTGGTGCACCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: RRRHGGAQVVRCAAL*PCRARVGRPLVHQA Trigger: CGCCTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGGCCCCGCCATGTCGCCGTCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 90 bp | CCCAAGTGGTGCGCTGTGCCGCCTTGTGCCCATGCCGCGCCCGCGTaGGCCGCCCCTTGGTGCACCAGGCGGGCGTGGAAACCGCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: PKWCAVPPCAHAAPA*AAPWCTRRAWKPPP Trigger: TGGCGGCGGTTTCCACGCCCGCCTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 90 bp | TGTGCGCCCAGGTGCGGTGGTGGCGACGGCTCCAGCTGTGCCTCGTaGCCGTCCTCGTGCAGTGCGTGGTGCAGGCCGGGTCCCGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: CAPRCGGGDGSSCAS*PSSCSAWCRPGPAP Trigger: CGGCGCGGGACCCGGCCTGCACCACGCACTGCACGAGGACGGCCACGAGGCACAGCTGGAGCCGTCGCCACCACCGCACCTGGGCGCACA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 90 bp | GTGTCCGTGTGCGCCCAGGTGCGGTGGTGGCGACGGCTCCAGCTGTaGCTCGTGGCCGTCCTCGTGCAGTGCGTGGTGCAGGCCGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VSVCAQVRWWRRLQL*LVAVLVQCVVQAGS Trigger: GGACCCGGCCTGCACCACGCACTGCACGAGGACGGCCACGAGGCACAGCTGGAGCCGTCGCCACCACCGCACCTGGGCGCACACGGACAC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CAA 90 bp | GCGCAGACCCTCTCTGCTAGGCCAGGAACCGAGCCGAGGGCTCGGGTAAAACGAGTGCGCTGTGCCGCCTaGTGCCCATGCCGCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: AQTLSARPGTEPRARVKRVRCAA*CPCRAR Trigger: GCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCAC...TCGTTTTACCCGAGCCCTCGGCTCGGTTCCTGGCCTAGCAGAGAGGGTCTGCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CAA 90 bp | ACACAGCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGGCGATCTTGTCCAGGTaGGTGGGGCTGCCGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: TQPLGRLSPLAGERGRSRAILSR*VGLPLD Trigger: GTCCAGCGGCAGCCCCACCAACCTGGACAAGATCGC...CCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGCTGTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS-3UTR CAA 90 bp | GCCTCTCGGCCGCCTTTCGCCGCTCGCTGGAGAGAGGGGTCGGTCCCGGGTGTTTCGTGCGCAGACGGCTaGGGACACTTGAGAAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: ASRPPFAARWREGSVPGVSCADG*GHLRKW Trigger: CCACTTTCTCAAGTGTCCCAAGCCGTCTGCGCACGA...AACACCCGGGACCGACCCCTCTCTCCAGCGAGCGGCGAAAGGCGGCCGAGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CAA 90 bp | CGCTGTGCCGCCTTGTGCCCATGCCGCGCCCGCGTGGGCCGCCCCTaGGTGCACCAGGCGGGCGTGGAAACCGCCGCCACCGCCGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: RCAALCPCRARVGRP*VHQAGVETAATAAV Trigger: GACGGCGGCGGTGGCGGCGGTTTCCACGCCCGCCTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | GCCCCGGGCGACGGCGACATGGCGGGGCCCAAGTGGTaGGCTGTGCCGCCTTGTGCCCATGCCGCGCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: APGDGDMAGPKW*AVPPCAHAAPA Trigger: CGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGGCCCCGCCATGTCGCCGTCGCCCGGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 72 bp | CCGGCCCCGGGCGACGGCGACATGGCGGGGCCCAAGTaGTGCGCTGTGCCGCCTTGTGCCCATGCCGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PAPGDGDMAGPK*CAVPPCAHAAP Trigger: GGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGGCCCCGCCATGTCGCCGTCGCCCGGGGCCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS TCA 72 bp | CAGTCGCCGCCGCCGCCTCCTCCCGTGGGTAGCCATTaGGGGTGCGCTAGGCCCACGGGGTGGCCCGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: QSPPPPPPVGSH*GCARPTGWPAP Trigger: GGGCGCGGGCCACCCCGTGGGCCTAGCGCACCCTCAATGGCTACCCACGGGAGGAGGCGGCGGCGGCGACTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | GCGACGGCGACATGGCGGGGCCCAAGTGGTGCGCTGTaGCGCCTTGTGCCCATGCCGCGCCCGCGTGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: ATATWRGPSGAL*RLVPMPRPRGP Trigger: CGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGGCCCCGCCATGTCGCCGTCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | GGCGACGGCTCCAGCTGTGCCTCGTGGCCGTCCTCGTaGAGTGCGTGGTGCAGGCCGGGTCCCGCGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: GDGSSCASWPSS*SAWCRPGPAPP Trigger: CGGCGGCGCGGGACCCGGCCTGCACCACGCACTGCACGAGGACGGCCACGAGGCACAGCTGGAGCCGTCGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CAA 90 bp | GGGCGACGGCGACATGGCGGGGCCCAAGTGGTGCGCTGTGCCGCCTaGTGCCCATGCCGCGCCCGCGTGGGCCGCCCCTTGGTGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: GRRRHGGAQVVRCAA*CPCRARVGRPLVHQ Trigger: CTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGGCCCCGCCATGTCGCCGTCGCCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | CGTCGTCAGCTCGGCCGGTACCGCCACCGCCTGCCTTaGCGTGTTCCAGGTGCGGGCCGCCCGCCCAGTCGC | + |
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Preference number: 6 (lower is better) Translates to: RRQLGRYRHRLP*RVPGAGRPPSR Trigger: GCGACTGGGCGGGCGGCCCGCACCTGGAACACGGCAAGGCAGGCGGTGGCGGTACCGGCCGAGCTGACGACG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | GGGGCCCAAGTGGTGCGCTGTGCCGCCTTGTGCCCATaGCGCGCCCGCGTGGGCCGCCCCTTGGTGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: GAQVVRCAALCP*RARVGRPLVHQ Trigger: CTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGGCCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | CATGGCGGGGCCCAAGTGGTGCGCTGTGCCGCCTTGTaGCCATGCCGCGCCCGCGTGGGCCGCCCCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: HGGAQVVRCAAL*PCRARVGRPLV Trigger: CACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCACCACTTGGGCCCCGCCATG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | GCGCCCGCGCCCAGCCACTCGTGGTGCATCAGCTTCTaGACTTCGCGGTACGCGGCCCCCGCGTGCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: APAPSHSWCISF*TSRYAAPACSR Trigger: GCGGCTGCACGCGGGGGCCGCGTACCGCGAAGTGCAGAAGCTGATGCACCACGAGTGGCTGGGCGCGGGCGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | ACGGGGTGGCCCGCGCCCGCGCCCAGCCACTCGTGGTaGATCAGCTTCTGCACTTCGCGGTACGCGGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: TGWPAPAPSHSW*ISFCTSRYAAP Trigger: GGGGGCCGCGTACCGCGAAGTGCAGAAGCTGATGCACCACGAGTGGCTGGGCGCGGGCGCGGGCCACCCCGT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 72 bp | CCCACGGGGTGGCCCGCGCCCGCGCCCAGCCACTCGTaGTGCATCAGCTTCTGCACTTCGCGGTACGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PTGWPAPAPSHS*CISFCTSRYAA Trigger: GGCCGCGTACCGCGAAGTGCAGAAGCTGATGCACCACGAGTGGCTGGGCGCGGGCGCGGGCCACCCCGTGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 72 bp | TGCGCTGTGCCGCCTTGTGCCCATGCCGCGCCCGCGTaGGCCGCCCCTTGGTGCACCAGGCGGGCGTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CAVPPCAHAAPA*AAPWCTRRAWK Trigger: TTTCCACGCCCGCCTGGTGCACCAAGGGGCGGCCCACGCGGGCGCGGCATGGGCACAAGGCGGCACAGCGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS GCA 72 bp | TGCGCCCAGGTGCGGTGGTGGCGACGGCTCCAGCTGTaGCTCGTGGCCGTCCTCGTGCAGTGCGTGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CAQVRWWRRLQL*LVAVLVQCVVQ Trigger: CTGCACCACGCACTGCACGAGGACGGCCACGAGGCACAGCTGGAGCCGTCGCCACCACCGCACCTGGGCGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 72 bp | AGGTGCGGTGGTGGCGACGGCTCCAGCTGTGCCTCGTaGCCGTCCTCGTGCAGTGCGTGGTGCAGGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: RCGGGDGSSCAS*PSSCSAWCRPG Trigger: ACCCGGCCTGCACCACGCACTGCACGAGGACGGCCACGAGGCACAGCTGGAGCCGTCGCCACCACCGCACCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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| CDS CCA 72 bp | TCCGTGTGCGTGTCCGTGTGCGCCCAGGTGCGGTGGTaGCGACGGCTCCAGCTGTGCCTCGTGGCCGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SVCVSVCAQVRW*RRLQLCLVAVL Trigger: GAGGACGGCCACGAGGCACAGCTGGAGCCGTCGCCACCACCGCACCTGGGCGCACACGGACACGCACACGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053491.9 |
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