Pregenerated sensors for POU2AF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032053Ensembl transcript IDs: ENSMUST00000034554.9, ENSMUST00000214322.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAAATGTTGCAAATGAGGCTCTGGAGGAAATCTGTTTGGATGCCTaGAGCCAAGACGTGAGGTCTCAAGATAAGAAGCGAAAAAGATGC | + |
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Preference number: 1 (lower is better) Translates to: ENVANEALEEICLDA*SQDVRSQDKKRKRC Trigger: GCATCTTTTTCGCTTCTTATCTTGAGACCTCACGTCTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCCTCATTTGCAACATTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR GCA 90 bp | AAGGTTGCTTCCCCAATGATGTGCCACCAAAGGAAAACCCTGAGCTaGAGACTTGGTGACATTCCGTATAAAGCGTTGTTCATAATATCA | + |
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Preference number: 1 (lower is better) Translates to: KVASPMMCHQRKTLS*RLGDIPYKALFIIS Trigger: TGATATTATGAACAACGCTTTATACGGAATGTCACCAAGTCTGCAGCTCAGGGTTTTCCTTTGGTGGCACATCATTGGGGAAGCAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR CCA 90 bp | AGCCTCCTCAATGATCGGCTTCACCTGTTTCTTTTCCTGTTGCTATaGCAATATGCTGACAGAAGTATTTTAAGTGCTGGCATCATGTTA | + |
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Preference number: 1 (lower is better) Translates to: SLLNDRLHLFLFLLL*QYADRSILSAGIML Trigger: TAACATGATGCCAGCACTTAAAATACTTCTGTCAGCATATTGCCATAGCAACAGGAAAAGAAACAGGTGAAGCCGATCATTGAGGAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR-3UTR TCA 90 bp | CACTCACTGTCCCTACCCACCCTGATGGTCCTGTCCCATCCCCCTGTAACCAGAAAGAAAGGAAGCCTGTaGAATAGCTACTTCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: HSLSLPTLMVLSHPPVTRKKGSL*NSYFKQ Trigger: CTGTTTGAAGTAGCTATTTCACAGGCTTCCTTTCTT...TCTGGTTACAGGGGGATGGGACAGGACCATCAGGGTGGGTAGGGACAGTGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACACATGTGTGTCCTGCTaGTCCTCAGCCCCGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LCCFVCFPSVNSSVIASNTCVSC*SSAPSP Trigger: GGGAGACGGGGCTGAGGAGCAGCAGGACACACATGT...GTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCGCGTCAGGATGGCCCTaGGTGAGTCACAACAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: CCFVCFPSVNSSVIASNSASGWP*VSHNRN Trigger: ATTCCTGTTGTGACTCACCCAGGGCCATCCTGACGC...GGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCATTTATCCTCCATACCATATCCAGCTTTCCTCCTAATCGCTGACAAGAACAGGAAAACCCTGAGCTaGAGACTTGGTGACATTCCG | + |
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Preference number: 2 (lower is better) Translates to: RHLSSIPYPAFLLIADKNRKTLS*RLGDIP Trigger: CGGAATGTCACCAAGTCTGCAGCTCAGGGTTTTCCT...GTTCTTGTCAGCGATTAGGAGGAAAGCTGGATATGGTATGGAGGATAAATGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCGCTTCCCCAATGATGTaGCACCAAAGGAAAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: CCFVCFPSVNSSVIASNSASPMM*HQRKTL Trigger: CAGGGTTTTCCTTTGGTGGCACATCATTGGGGAAGC...GGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR CAA 90 bp | AGTGCAAGCCTCCTCAATGATCGGCTTCACCTGTTTCTTTTCCTGTaGCTATGGCAATATGCTGACAGAAGTATTTTAAGTGCTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: SASLLNDRLHLFLFL*LWQYADRSILSAGI Trigger: GATGCCAGCACTTAAAATACTTCTGTCAGCATATTGCCATAGCAACAGGAAAAGAAACAGGTGAAGCCGATCATTGAGGAGGCTTGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACACCAAAGGAAAACCCTaGGCTGCAGACTTGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: LCCFVCFPSVNSSVIASNTKGKP*AADLVT Trigger: TGTCACCAAGTCTGCAGCTCAGGGTTTTCCTTTGGT...GTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR CAA 90 bp | AGGAAAACCCTGAGCTGCAGACTTGGTGACATTCCGTATAAAGCGTaGTTCATAATATCACTATCATTTGCCGCTCCAGAGGAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: RKTLSCRLGDIPYKA*FIISLSFAAPEEEN Trigger: GTTTTCTTCCTCTGGAGCGGCAAATGATAGTGATATTATGAACAACGCTTTATACGGAATGTCACCAAGTCTGCAGCTCAGGGTTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR CAA 90 bp | ATCTTTATTGAAAATGTTGCAAATGAGGCTCTGGAGGAAATCTGTTaGGATGCCTGCAGCCAAGACGTGAGGTCTCAAGATAAGAAGCGA | + |
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Preference number: 2 (lower is better) Translates to: IFIENVANEALEEIC*DACSQDVRSQDKKR Trigger: TCGCTTCTTATCTTGAGACCTCACGTCTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCCTCATTTGCAACATTTTCAATAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCCAACAGCAAGTGTTATaGTTCTCCAGCAAAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: CCFVCFPSVNSSVIASNSQQQVL*FSSKNC Trigger: GCAGTTTTTGCTGGAGAAGCATAACACTTGCTGTTG...GGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCGCTATGGCAATATGCTaGCAGAAGTATTTTAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: CCFVCFPSVNSSVIASNSAMAIC*QKYFKC Trigger: GCACTTAAAATACTTCTGTCAGCATATTGCCATAGC...GGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR CCA 72 bp | GACCAGGACTTCAGGACCCCAGAGACAGCCGGTGAGTaGGCGCAAGAATCCATAGCAACGCGTCAGGATGGC | + |
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Preference number: 3 (lower is better) Translates to: DQDFRTPETAGE*AQESIATRQDG Trigger: GCCATCCTGACGCGTTGCTATGGATTCTTGCGCCCACTCACCGGCTGTCTCTGGGGTCCTGAAGTCCTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR TCA 72 bp | CAAGAATCCATAGCAACGCGTCAGGATGGCCCTGGGTaGGTCACAACAGGAATTAAAAGCCCACGTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: QESIATRQDGPG*VTTGIKSPRGR Trigger: CCTTCCACGTGGGCTTTTAATTCCTGTTGTGACTCACCCAGGGCCATCCTGACGCGTTGCTATGGATTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR GCA 72 bp | GCAAATGAGGCTCTGGAGGAAATCTGTTTGGATGCCTaGAGCCAAGACGTGAGGTCTCAAGATAAGAAGCGA | + |
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Preference number: 3 (lower is better) Translates to: ANEALEEICLDA*SQDVRSQDKKR Trigger: TCGCTTCTTATCTTGAGACCTCACGTCTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCCTCATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR GCA 72 bp | TCCCCAATGATGTGCCACCAAAGGAAAACCCTGAGCTaGAGACTTGGTGACATTCCGTATAAAGCGTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: SPMMCHQRKTLS*RLGDIPYKALF Trigger: GAACAACGCTTTATACGGAATGTCACCAAGTCTGCAGCTCAGGGTTTTCCTTTGGTGGCACATCATTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR-3UTR CAA 90 bp | TCCCAAAGACACATCCACTTCAGGAGCAAAGCACTAGGAGACAGCAAAACACTCCTGTTTCTTTTCCTGTaGCTATGGCAATATGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: SQRHIHFRSKALGDSKTLLFLFL*LWQYAD Trigger: GTCAGCATATTGCCATAGCAACAGGAAAAGAAACAG...GAGTGTTTTGCTGTCTCCTAGTGCTTTGCTCCTGAAGTGGATGTGTCTTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR TCA 72 bp | TGGAGGAAATCTGTTTGGATGCCTGCAGCCAAGACGTaGGGTCTCAAGATAAGAAGCGAAAAAGATGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: WRKSVWMPAAKT*GLKIRSEKDAN Trigger: ATTGGCATCTTTTTCGCTTCTTATCTTGAGACCTCACGTCTTGGCTGCAGGCATCCAAACAGATTTCCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR GCA 72 bp | CAAGACGTGAGGTCTCAAGATAAGAAGCGAAAAAGATaGCAATTCAATCCCAGCAACCGCTCACACTACTTT | + |
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Preference number: 3 (lower is better) Translates to: QDVRSQDKKRKR*QFNPSNRSHYF Trigger: AAAGTAGTGTGAGCGGTTGCTGGGATTGAATTGGCATCTTTTTCGCTTCTTATCTTGAGACCTCACGTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR CCA 72 bp | TTGTGTATGTGTAATGATGGTATCATTAGTAAACAATaGGCCAGTTCCCAAAGACACATCCACTTCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: LCMCNDGIISKQ*ASSQRHIHFRS Trigger: GCTCCTGAAGTGGATGTGTCTTTGGGAACTGGCCCATTGTTTACTAATGATACCATCATTACACATACACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| 3UTR TCA 72 bp | TCACCTGTTTCTTTTCCTGTTGCTATGGCAATATGCTaGCAGAAGTATTTTAAGTGCTGGCATCATGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: SPVSFPVAMAIC*QKYFKCWHHVS Trigger: GCTAACATGATGCCAGCACTTAAAATACTTCTGTCAGCATATTGCCATAGCAACAGGAAAAGAAACAGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR-3UTR CAA 90 bp | AAGAAGGGAGAAAAGAAGGGATACAATTTAGCTTTAGGAAGAAAGGAAGCCTGTGAAGTCTGGGCTCTATaGAACACTTTTAAAATCTCA | + |
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Preference number: 3 (lower is better) Translates to: KKGEKKGYNLALGRKEACEVWAL*NTFKIS Trigger: TGAGATTTTAAAAGTGTTCAATAGAGCCCAGACTTC...ACAGGCTTCCTTTCTTCCTAAAGCTAAATTGTATCCCTTCTTTTCTCCCTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR CCA 90 bp | GGCTCTGGAGGAAATCTGTTTGGATGCCTGCAGCCAAGACGTGAGGTCTCAAGATCGGGACCCTCCAGCTaGGGCCCCACCGCGGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: GSGGNLFGCLQPRREVSRSGPSS*GPTAGV Trigger: TACACCCGCGGTGGGGCCCCAGCTGGAGGGTCCCGA...TCTTGAGACCTCACGTCTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CCA 90 bp | CACTCACTGTCCCTACCCACCCTGATGGTCCTGTCCCATCCCCCTGTAACCAGAACTGCAGGCTGGAGGTaGGCAGTGTGGAAAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HSLSLPTLMVLSHPPVTRTAGWR*AVWKGA Trigger: AGCCCCTTTCCACACTGCCCACCTCCAGCCTGCAGT...TCTGGTTACAGGGGGATGGGACAGGACCATCAGGGTGGGTAGGGACAGTGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR GCA 90 bp | AAAATGTTGCAAATGAGGCTCTGGAGGAAATCTGTTTGGATGCCTGCAGCCAAGGTGAGGGGCGCCTGGTaGTCGGGACCCTCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KMLQMRLWRKSVWMPAAKVRGAW*SGPSSW Trigger: CCAGCTGGAGGGTCCCGAGCACCAGGCGCCCCTCAC...CTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCCTCATTTGCAACATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CCA 90 bp | CACTCACTGTCCCTACCCACCCTGATGGTCCTGTCCCATCCCCCTGTAACCAGACATGTCCTGAAGGACTaGCTCTGGGATAGAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: HSLSLPTLMVLSHPPVTRHVLKD*LWDRDG Trigger: CCCATCTCTATCCCAGAGCCAGTCCTTCAGGACATG...TCTGGTTACAGGGGGATGGGACAGGACCATCAGGGTGGGTAGGGACAGTGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR GCA 90 bp | AGGAGCAAAGCACTAGGAGACAGCAAAACACTCAACAGCAAGTGTTATGCTTCTGTGAGGGGCGCCTGGTaGTCGGGACCCTCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSKALGDSKTLNSKCYASVRGAW*SGPSSW Trigger: CCAGCTGGAGGGTCCCGAGCACCAGGCGCCCCTCAC...AGAAGCATAACACTTGCTGTTGAGTGTTTTGCTGTCTCCTAGTGCTTTGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR TCA 90 bp | ATTAGTAAACAATGGGCCAGTTCCCAAAGACACATCCACTTCAGGAGCAAAGCAGCCACGGGAAATAAGTaGGGGGCGCCTGGTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: ISKQWASSQRHIHFRSKAATGNK*GAPGAR Trigger: CCGAGCACCAGGCGCCCCTCACTTATTTCCCGTGGC...TGCTTTGCTCCTGAAGTGGATGTGTCTTTGGGAACTGGCCCATTGTTTACTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR TCA 90 bp | GTTGCTTCCCCAATGATGTGCCACCAAAGGAAAACCCTGAGCTGCAGACTTGGTCGGAGAGGGTGTGGTTaGGCTCGTACGTGTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VASPMMCHQRKTLSCRLGRRGCG*ARTCCF Trigger: AAAGCAACACGTACGAGCTCAACCACACCCTCTCCG...ACCAAGTCTGCAGCTCAGGGTTTTCCTTTGGTGGCACATCATTGGGGAAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR CCA 90 bp | CTTTGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCGGGACCCTCCAGCTaGGGCCCCACCGCGGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: LCCFVCFPSVNSSVIASNSGPSS*GPTAGV Trigger: TACACCCGCGGTGGGGCCCCAGCTGGAGGGTCCCGA...GTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CCA 90 bp | AAAATGTTGCAAATGAGGCTCTGGAGGAAATCTGTTTGGATGCCTGCAGCCAAGGGGAGCTGGACAAACTaGGGCCCAGACAGGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: KMLQMRLWRKSVWMPAAKGSWTN*GPDRVG Trigger: CCCAACCCTGTCTGGGCCCCAGTTTGTCCAGCTCCC...CTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCCTCATTTGCAACATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR TCA 90 bp | AGGAGCAAAGCACTAGGAGACAGCAAAACACTCAACAGCAAGTGTTATGCTTCTCATGGAGCCAATGGCTaGAGAGTGGCCGGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RSKALGDSKTLNSKCYASHGANG*RVAGAG Trigger: ACCTGCCCCGGCCACTCTTCAGCCATTGGCTCCATG...AGAAGCATAACACTTGCTGTTGAGTGTTTTGCTGTCTCCTAGTGCTTTGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR TCA 90 bp | TTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCCAAGTAGCTGGGAAAGTTGGGGCAGGAGGTTaGTACTGCAGGCTGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: FPSVNSSVIASNSQVAGKVGAGG*YCRLEV Trigger: CACCTCCAGCCTGCAGTATCAACCTCCTGCCCCAAC...TTTCCCAGCTACTTGGGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR GCA 90 bp | TTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCCAAGTAGCTGGGAAAAGGAAGGACCCACAGTaGTGTAGGTGGCCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FPSVNSSVIASNSQVAGKRKDPQ*CRWPGA Trigger: AGCCCCTGGCCACCTACAGCACTGTGGGTCCTTCCT...TTTCCCAGCTACTTGGGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR GCA 90 bp | TCCCAAAGACACATCCACTTCAGGAGCAAAGCACTAGGAGACAGCAAAACACTCCTGGGGCACACAGGCTaGACGTACATGTCAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SQRHIHFRSKALGDSKTLLGHTG*TYMSVE Trigger: CTCCACTGACATGTACGTGCAGCCTGTGTGCCCCAG...GAGTGTTTTGCTGTCTCCTAGTGCTTTGCTCCTGAAGTGGATGTGTCTTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR CCA 90 bp | ATGTTGCAAATGAGGCTCTGGAGGAAATCTGTTTGGATGCCTGCAGCCAAGACGATAGAGATGGGGAGCTaGACAAACTGGGGCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: MLQMRLWRKSVWMPAAKTIEMGS*TNWGPD Trigger: GTCTGGGCCCCAGTTTGTCCAGCTCCCCATCTCTAT...CGTCTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCCTCATTTGCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR TCA 90 bp | CTTTGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACGCCACGGGAAATAAGTaGGGGGCGCCTGGTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LCCFVCFPSVNSSVIASNATGNK*GAPGAR Trigger: CCGAGCACCAGGCGCCCCTCACTTATTTCCCGTGGC...GTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGCAAATGAGGCTCTGGAGGAAATCTGTTTGGATGCCTGCAGCCAAGACGCATGTCCTGAAGGACTaGCTCTGGGATAGAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: MLQMRLWRKSVWMPAAKTHVLKD*LWDRDG Trigger: CCCATCTCTATCCCAGAGCCAGTCCTTCAGGACATG...CGTCTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCCTCATTTGCAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCTTGTTCATGGTAACCACCAACAGAAGTGTAAACCTACCATTCAGATCTTGGAGGTGGGCAGTGTaGAAAGGGGCTGAGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: PFLFMVTTNRSVNLPFRSWRWAV*KGAEAT Trigger: CGTGGCCTCAGCCCCTTTCCACACTGCCCACCTCCA...AGATCTGAATGGTAGGTTTACACTTCTGTTGGTGGTTACCATGAACAAGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CCA 90 bp | TGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCGGGCCCAGACAGGGTTaGGGCAGGAGGTTGATACTG | + |
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Preference number: 4 (lower is better) Translates to: CCFVCFPSVNSSVIASNSGPRQG*GRRLIL Trigger: CAGTATCAACCTCCTGCCCCAACCCTGTCTGGGCCC...GGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCTTGTTCATGGTAACCACCAACAGAAGTGTAAACCTACCATTCAGATCTGGGAGCTGGACAAACTaGGGCCCAGACAGGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PFLFMVTTNRSVNLPFRSGSWTN*GPDRVG Trigger: CCCAACCCTGTCTGGGCCCCAGTTTGTCCAGCTCCC...AGATCTGAATGGTAGGTTTACACTTCTGTTGGTGGTTACCATGAACAAGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR TCA 90 bp | GATGGTATCATTAGTAAACAATGGGCCAGTTCCCAAAGACACATCCACTTCAGGCCTTCACTGGCTCCTTaGCTCGAACACCCTGGTATG | + |
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Preference number: 4 (lower is better) Translates to: DGIISKQWASSQRHIHFRPSLAP*LEHPGM Trigger: CATACCAGGGTGTTCGAGTCAAGGAGCCAGTGAAGG...CCTGAAGTGGATGTGTCTTTGGGAACTGGCCCATTGTTTACTAATGATACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR CCA 90 bp | CTTTGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACCCAATGGCTGAAGAGTaGCCGGGGCAGGTTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LCCFVCFPSVNSSVIASNPMAEE*PGQVGR Trigger: TCTCCCAACCTGCCCCGGCCACTCTTCAGCCATTGG...GTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR CCA 90 bp | ACACATCCACTTCAGGAGCAAAGCACTAGGAGACAGCAAAACACTCAACAGCAAGTTGATACTGCAGGCTaGAGGTGGGCAGTGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: THPLQEQSTRRQQNTQQQVDTAG*RWAVWK Trigger: TTTCCACACTGCCCACCTCCAGCCTGCAGTATCAAC...TTGCTGTTGAGTGTTTTGCTGTCTCCTAGTGCTTTGCTCCTGAAGTGGATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR TCA 90 bp | TTGTTCATGGTAACCACCAACAGAAGTGTAAACCTACCATTCAGATCTAGCATTGTTGGGGCAGGAGGTTaGTACTGCAGGCTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFMVTTNRSVNLPFRSSIVGAGG*YCRLEV Trigger: CACCTCCAGCCTGCAGTATCAACCTCCTGCCCCAAC...AATGCTAGATCTGAATGGTAGGTTTACACTTCTGTTGGTGGTTACCATGAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCACTGGTATGGCCTTGGTaGGGCAGGAGCTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLCCFVCFPSVNSSVIASLVWPW*GRSLLW Trigger: CCAGAGCAAGCTCCTGCCCCACCAAGGCCATACCAG...TGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAACTGCAGGCTGGAGGTaGGCAGTGTGGAAAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLCCFVCFPSVNSSVIASTAGWR*AVWKGA Trigger: AGCCCCTTTCCACACTGCCCACCTCCAGCCTGCAGT...TGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTTGTTCATGGTAACCACCAACAGAAGTGTAAACCTACCATTCAGATCTTGGAGTAGGGGCAGCTaGCAGCTTCATGGGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: PFLFMVTTNRSVNLPFRSWSRGS*QLHGTH Trigger: ATGTGTCCCATGAAGCTGTCAGCTGCCCCTACTCCA...AGATCTGAATGGTAGGTTTACACTTCTGTTGGTGGTTACCATGAACAAGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS-3UTR CCA 90 bp | AACTTGTGTATGTGTAATGATGGTATCATTAGTAAACAATGGGCCAGTTCCCAAACCCTGGTATGGCCTTaGTGGGGCAGGAGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLCMCNDGIISKQWASSQTLVWP*WGRSLL Trigger: GAGCAAGCTCCTGCCCCACCAAGGCCATACCAGGGT...TTGGGAACTGGCCCATTGTTTACTAATGATACCATCATTACACATACACAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGGTGGGATATCAAAGAAACTGTCATTTCTAGAAGATCTATTGGTTCTATGGAGGTGGGCAGTGTaGAAAGGGGCTGAGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: KEGGISKKLSFLEDLLVLWRWAV*KGAEAT Trigger: CGTGGCCTCAGCCCCTTTCCACACTGCCCACCTCCA...TAGAACCAATAGATCTTCTAGAAATGACAGTTTCTTTGATATCCCACCCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
||
| CDS-3UTR CCA 90 bp | ACTTGTGTATGTGTAATGATGGTATCATTAGTAAACAATGGGCCAGTTCCCAAAGGGCCCAGACAGGGTTaGGGCAGGAGGTTGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: TCVCVMMVSLVNNGPVPKGPRQG*GRRLIL Trigger: CAGTATCAACCTCCTGCCCCAACCCTGTCTGGGCCC...TTTGGGAACTGGCCCATTGTTTACTAATGATACCATCATTACACATACACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
||
| CDS-3UTR CCA 90 bp | AGCGTTGTTCATAATATCACTATCATTTGCCGCTCCAGAGGAAGAAAACTGGAAATAGAGATGGGGAGCTaGACAAACTGGGGCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVVHNITIICRSRGRKLEIEMGS*TNWGPD Trigger: GTCTGGGCCCCAGTTTGTCCAGCTCCCCATCTCTAT...TTCCAGTTTTCTTCCTCTGGAGCGGCAAATGATAGTGATATTATGAACAACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| 3UTR CAA 72 bp | GAAAATGTTGCAAATGAGGCTCTGGAGGAAATCTGTTaGGATGCCTGCAGCCAAGACGTGAGGTCTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ENVANEALEEIC*DACSQDVRSQD Trigger: ATCTTGAGACCTCACGTCTTGGCTGCAGGCATCCAAACAGATTTCCTCCAGAGCCTCATTTGCAACATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CCA 90 bp | AAGAAGGGAGAAAAGAAGGGATACAATTTAGCTTTAGGAAGAAAGGAAGCCTGTCCTCCTCTGTCACTGTaGAAGCAGAAACCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KKGEKKGYNLALGRKEACPPLSL*KQKPPC Trigger: ACATGGAGGTTTCTGCTTCCACAGTGACAGAGGAGG...ACAGGCTTCCTTTCTTCCTAAAGCTAAATTGTATCCCTTCTTTTCTCCCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGCAAAGCACTAGGAGACAGCAAAACACTCAACAGCAAGTGTTATGCTTCTATTAGTGATGAGTGGTaGAGAAGCATAGGTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RSKALGDSKTLNSKCYASISDEW*RSIGQH Trigger: GTGTTGACCTATGCTTCTCCACCACTCATCACTAAT...AGAAGCATAACACTTGCTGTTGAGTGTTTTGCTGTCTCCTAGTGCTTTGCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCCAGAAGTATTTTAAGTaGTGGCATCATGTTAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCFVCFPSVNSSVIASNSQKYFK*WHHVSG Trigger: CCCGCTAACATGATGCCAGCACTTAAAATACTTCTG...GGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214322.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAAAGCACTAGGAGACAGCAAAACACTCAACAGCAAGTGTTATGCTTCTTGTTTCTTTTCCTGTTaGTATGGCAATATGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RSKALGDSKTLNSKCYASCFFSC*YGNMLT Trigger: TGTCAGCATATTGCCATAGCAACAGGAAAAGAAACA...AGAAGCATAACACTTGCTGTTGAGTGTTTTGCTGTCTCCTAGTGCTTTGCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214322.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTTTGTTTGTTTTCCCAGTGTTAACTCCTCTGTGATTGCCTCAAACTCCCTTTTCCTGTTGCTATaGCAATATGCTGACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCFVCFPSVNSSVIASNSLFLLL*QYADRS Trigger: ACTTCTGTCAGCATATTGCCATAGCAACAGGAAAAG...GGAGTTTGAGGCAATCACAGAGGAGTTAACACTGGGAAAACAAACAAAACAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214322.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGGTGGGATATCAAAGAAACTGTCATTTCTAGAAGATCTATTGGTTCTAGCTATGGCAATATGCTaGCAGAAGTATTTTAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEGGISKKLSFLEDLLVLAMAIC*QKYFKC Trigger: GCACTTAAAATACTTCTGTCAGCATATTGCCATAGC...TAGAACCAATAGATCTTCTAGAAATGACAGTTTCTTTGATATCCCACCCTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214322.2 |
||
| 3UTR CAA 72 bp | GGGATATCAAAGAAACTGTCATTTCTAGAAGATCTATaGGTTCTACATGGATTCTACAGACTAAAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GISKKLSFLEDL*VLHGFYRLKLV Trigger: CACAAGTTTTAGTCTGTAGAATCCATGTAGAACCAATAGATCTTCTAGAAATGACAGTTTCTTTGATATCCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
||
| CDS CCA 90 bp | GGTGGGGCAGTACCACCGCGGTCGGTGGCCCAGCTGCCCCAACGCTaGTATGGCCACGCTTTCTTCTCAGTAGCTCCTTCACTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGAVPPRSVAQLPQR*YGHAFFSVAPSLAP Trigger: AGGAGCCAGTGAAGGAGCTACTGAGAAGAAAGCGTGGCCATACCAGCGTTGGGGCAGCTGGGCCACCGACCGCGGTGGTACTGCCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | GGCAGTACCACCGCGGTCGGTGGCCCAGCTGCCCCAACGCTGGTATaGCCACGCTTTCTTCTCAGTAGCTCCTTCACTGGCTCCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSTTAVGGPAAPTLV*PRFLLSSSFTGSLT Trigger: AGTCAAGGAGCCAGTGAAGGAGCTACTGAGAAGAAAGCGTGGCCATACCAGCGTTGGGGCAGCTGGGCCACCGACCGCGGTGGTACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | AGCTTCATGGGACACATACTCCGTGTAGGGTGTCCATGGAGCCAATaGCTGAAGAGTGGCCGGGGCAGGTTGGGAGAGCCAGCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SFMGHILRVGCPWSQ*LKSGRGRLGEPAST Trigger: TGTGCTGGCTGGCTCTCCCAACCTGCCCCGGCCACTCTTCAGCCATTGGCTCCATGGACACCCTACACGGAGTATGTGTCCCATGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | GCAGCTGACAGCTTCATGGGACACATACTCCGTGTAGGGTGTCCATaGAGCCAATGGCTGAAGAGTGGCCGGGGCAGGTTGGGAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AADSFMGHILRVGCP*SQWLKSGRGRLGEP Trigger: TGGCTCTCCCAACCTGCCCCGGCCACTCTTCAGCCATTGGCTCCATGGACACCCTACACGGAGTATGTGTCCCATGAAGCTGTCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | GAGAAGCATAGGTCAACACCGAGGAGGGTCCCACCACTGTGTAGCTaGGGCACACAGGCTGCACGTACATGTCAGTGGAGTAGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EKHRSTPRRVPPLCS*GTQAARTCQWSRGS Trigger: GCTGCCCCTACTCCACTGACATGTACGTGCAGCCTGTGTGCCCCAGCTACACAGTGGTGGGACCCTCCTCGGTGTTGACCTATGCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | GGGACCCTCCAGCTGGGGCCCCACCGCGGGTGTAGCAGTGCTTCTTaGCGTGACATTAGTGATGAGTGGTGGAGAAGCATAGGTCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: GTLQLGPHRGCSSAS*RDISDEWWRSIGQH Trigger: GTGTTGACCTATGCTTCTCCACCACTCATCACTAATGTCACGCCAAGAAGCACTGCTACACCCGCGGTGGGGCCCCAGCTGGAGGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS TCA 90 bp | TGGGGCACACAGGCTGCACGTACATGTCAGTGGAGTAGGGGCAGCTaGCAGCTTCATGGGACACATACTCCGTGTAGGGTGTCCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WGTQAARTCQWSRGS*QLHGTHTPCRVSME Trigger: CTCCATGGACACCCTACACGGAGTATGTGTCCCATGAAGCTGTCAGCTGCCCCTACTCCACTGACATGTACGTGCAGCCTGTGTGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | ACACATACTCCGTGTAGGGTGTCCATGGAGCCAATGGCTGAAGAGTaGCCGGGGCAGGTTGGGAGAGCCAGCCAGCACATAATGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: THTPCRVSMEPMAEE*PGQVGRASQHIMFP Trigger: AGGGAACATTATGTGCTGGCTGGCTCTCCCAACCTGCCCCGGCCACTCTTCAGCCATTGGCTCCATGGACACCCTACACGGAGTATGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS TCA 90 bp | TGGTATGGCCACGCTTTCTTCTCAGTAGCTCCTTCACTGGCTCCTTaGCTCGAACACCCTGGTATGGCCTTGGTGGGGCAGGAGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WYGHAFFSVAPSLAP*LEHPGMALVGQELA Trigger: AGCAAGCTCCTGCCCCACCAAGGCCATACCAGGGTGTTCGAGTCAAGGAGCCAGTGAAGGAGCTACTGAGAAGAAAGCGTGGCCATACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS TCA 90 bp | TCAATGGTCAGGGAGCTGATGGCCCTTCTGGGGTCATCCATGTCCTaGAGGACTGGCTCTGGGATAGAGATGGGGAGCTGGACAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SMVRELMALLGSSMS*RTGSGIEMGSWTNW Trigger: CCAGTTTGTCCAGCTCCCCATCTCTATCCCAGAGCCAGTCCTTCAGGACATGGATGACCCCAGAAGGGCCATCAGCTCCCTGACCATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS CCA 90 bp | CTCCTTCACTGGCTCCTTGACTCGAACACCCTGGTATGGCCTTGGTaGGGCAGGAGCTTGCTCTGGAGCTGTGGATTTTTGCCAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLHWLLDSNTLVWPW*GRSLLWSCGFLPEH Trigger: ATGCTCTGGCAAAAATCCACAGCTCCAGAGCAAGCTCCTGCCCCACCAAGGCCATACCAGGGTGTTCGAGTCAAGGAGCCAGTGAAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | CACCGCGGGTGTAGCAGTGCTTCTTGGCGTGACATTAGTGATGAGTaGTGGAGAAGCATAGGTCAACACCGAGGAGGGTCCCACCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRGCSSASWRDISDE*WRSIGQHRGGSHHC Trigger: ACAGTGGTGGGACCCTCCTCGGTGTTGACCTATGCTTCTCCACCACTCATCACTAATGTCACGCCAAGAAGCACTGCTACACCCGCGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS TCA 90 bp | TGCTTTCCTCTTCCTCCAGAAGCAGCTTGTCAATGGTCAGGGAGCTaGTGGCCCTTCTGGGGTCATCCATGTCCTGAAGGACTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CFPLPPEAACQWSGS*WPFWGHPCPEGLAL Trigger: CAGAGCCAGTCCTTCAGGACATGGATGACCCCAGAAGGGCCATCAGCTCCCTGACCATTGACAAGCTGCTTCTGGAGGAAGAGGAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS CCA 90 bp | TTTCTTCTCAGTAGCTCCTTCACTGGCTCCTTGACTCGAACACCCTaGTATGGCCTTGGTGGGGCAGGAGCTTGCTCTGGAGCTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLLSSSFTGSLTRTP*YGLGGAGACSGAVD Trigger: ATCCACAGCTCCAGAGCAAGCTCCTGCCCCACCAAGGCCATACCAGGGTGTTCGAGTCAAGGAGCCAGTGAAGGAGCTACTGAGAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | GTTGGGAGAGCCAGCCAGCACATAATGTTCCCTCCTCTGTCACTGTaGAAGCAGAAACCTCCATGTCAAGGCAGGAAGGACCCACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGRASQHIMFPPLSL*KQKPPCQGRKDPQC Trigger: GCACTGTGGGTCCTTCCTGCCTTGACATGGAGGTTTCTGCTTCCACAGTGACAGAGGAGGGAACATTATGTGCTGGCTGGCTCTCCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 90 bp | CGCGGGTGTAGCAGTGCTTCTTGGCGTGACATTAGTGATGAGTGGTaGAGAAGCATAGGTCAACACCGAGGAGGGTCCCACCACTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RGCSSASWRDISDEW*RSIGQHRGGSHHCV Trigger: TACACAGTGGTGGGACCCTCCTCGGTGTTGACCTATGCTTCTCCACCACTCATCACTAATGTCACGCCAAGAAGCACTGCTACACCCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CAA 90 bp | TCCCAAAGACACATCCACTTCAGGAGCAAAGCACTAGGAGACAGCAAAACACTCCACCCTGGTATGGCCTaGGTGGGGCAGGAGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQRHIHFRSKALGDSKTLHPGMA*VGQELA Trigger: AGCAAGCTCCTGCCCCACCAAGGCCATACCAGGGTG...GAGTGTTTTGCTGTCTCCTAGTGCTTTGCTCCTGAAGTGGATGTGTCTTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS-3UTR CAA 90 bp | AACTTGTGTATGTGTAATGATGGTATCATTAGTAAACAATGGGCCAGTTCCCAAGGTTGGGGCAGGAGGTaGATACTGCAGGCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NLCMCNDGIISKQWASSQGWGRR*ILQAGG Trigger: ACCTCCAGCCTGCAGTATCAACCTCCTGCCCCAACC...TTGGGAACTGGCCCATTGTTTACTAATGATACCATCATTACACATACACAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CAA 90 bp | ACTTGTGTATGTGTAATGATGGTATCATTAGTAAACAATGGGCCAGTTCCCAAAGGTTGGGGCAGGAGGTaGATACTGCAGGCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TCVCVMMVSLVNNGPVPKGWGRR*ILQAGG Trigger: ACCTCCAGCCTGCAGTATCAACCTCCTGCCCCAACC...TTTGGGAACTGGCCCATTGTTTACTAATGATACCATCATTACACATACACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS-3UTR CAA 90 bp | ATTAGTAAACAATGGGCCAGTTCCCAAAGACACATCCACTTCAGGAGCAAAGCACTGTTTCTTTTCCTGTaGCTATGGCAATATGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISKQWASSQRHIHFRSKALFLFL*LWQYAD Trigger: GTCAGCATATTGCCATAGCAACAGGAAAAGAAACAG...TGCTTTGCTCCTGAAGTGGATGTGTCTTTGGGAACTGGCCCATTGTTTACTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214322.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGGGTGGGATATCAAAGAAACTGTCATTTCTAGAAGATCTATTGGTTCTATCCTTCACTGGCTCCTaGACTCGAACACCCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KEGGISKKLSFLEDLLVLSFTGS*TRTPWY Trigger: ATACCAGGGTGTTCGAGTCAAGGAGCCAGTGAAGGA...TAGAACCAATAGATCTTCTAGAAATGACAGTTTCTTTGATATCCCACCCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS TCA 72 bp | GCAGTGTGGAAAGGGGCTGAGGCCACGGGAAATAAGTaGGGGGCGCCTGGTGCTCGGGACCCTCCAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVWKGAEATGNK*GAPGARDPPAG Trigger: CCCAGCTGGAGGGTCCCGAGCACCAGGCGCCCCTCACTTATTTCCCGTGGCCTCAGCCCCTTTCCACACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS TCA 72 bp | AGGGAGCTGATGGCCCTTCTGGGGTCATCCATGTCCTaGAGGACTGGCTCTGGGATAGAGATGGGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RELMALLGSSMS*RTGSGIEMGSW Trigger: CCAGCTCCCCATCTCTATCCCAGAGCCAGTCCTTCAGGACATGGATGACCCCAGAAGGGCCATCAGCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS CAA 72 bp | GCGGGCGTGTTGCTTTCCTCTTCCTCCAGAAGCAGCTaGTCAATGGTCAGGGAGCTGATGGCCCTTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGVLLSSSSRSS*SMVRELMALLG Trigger: CCCCAGAAGGGCCATCAGCTCCCTGACCATTGACAAGCTGCTTCTGGAGGAAGAGGAAAGCAACACGCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214322.2 |
||
| CDS CAA 90 bp | CTGGTATGGCCACGCTTTCTTCTCAGTAGCTCCTTCACTGGCTCCTaGACTCGAACACCCTGGTATGGCCTTGGTGGGGCAGGAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVWPRFLLSSSFTGS*TRTPWYGLGGAGAC Trigger: GCAAGCTCCTGCCCCACCAAGGCCATACCAGGGTGTTCGAGTCAAGGAGCCAGTGAAGGAGCTACTGAGAAGAAAGCGTGGCCATACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS CCA 72 bp | AGCTTCATGGGACACATACTCCGTGTAGGGTGTCCATaGAGCCAATGGCTGAAGAGTGGCCGGGGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFMGHILRVGCP*SQWLKSGRGRL Trigger: CAACCTGCCCCGGCCACTCTTCAGCCATTGGCTCCATGGACACCCTACACGGAGTATGTGTCCCATGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS TCA 72 bp | CACGCTTTCTTCTCAGTAGCTCCTTCACTGGCTCCTTaGCTCGAACACCCTGGTATGGCCTTGGTGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HAFFSVAPSLAP*LEHPGMALVGQ Trigger: CTGCCCCACCAAGGCCATACCAGGGTGTTCGAGTCAAGGAGCCAGTGAAGGAGCTACTGAGAAGAAAGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS TCA 72 bp | CAGGCTGCACGTACATGTCAGTGGAGTAGGGGCAGCTaGCAGCTTCATGGGACACATACTCCGTGTAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QAARTCQWSRGS*QLHGTHTPCRV Trigger: CACCCTACACGGAGTATGTGTCCCATGAAGCTGTCAGCTGCCCCTACTCCACTGACATGTACGTGCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS CCA 72 bp | TGGCTCCTTGACTCGAACACCCTGGTATGGCCTTGGTaGGGCAGGAGCTTGCTCTGGAGCTGTGGATTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WLLDSNTLVWPW*GRSLLWSCGFL Trigger: CAAAAATCCACAGCTCCAGAGCAAGCTCCTGCCCCACCAAGGCCATACCAGGGTGTTCGAGTCAAGGAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
||
| CDS CCA 72 bp | GATGGCCCTTCTGGGGTCATCCATGTCCTGAAGGACTaGCTCTGGGATAGAGATGGGGAGCTGGACAAACTG | + |
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Preference number: 6 (lower is better) Translates to: DGPSGVIHVLKD*LWDRDGELDKL Trigger: CAGTTTGTCCAGCTCCCCATCTCTATCCCAGAGCCAGTCCTTCAGGACATGGATGACCCCAGAAGGGCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS CAA 72 bp | CCACGCTTTCTTCTCAGTAGCTCCTTCACTGGCTCCTaGACTCGAACACCCTGGTATGGCCTTGGTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PRFLLSSSFTGS*TRTPWYGLGGA Trigger: TGCCCCACCAAGGCCATACCAGGGTGTTCGAGTCAAGGAGCCAGTGAAGGAGCTACTGAGAAGAAAGCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CAA 72 bp | TCGTACGTGTTGCTTTCCTCTTCCTCCAGAAGCAGCTaGTCAATGGTCAGGGAGCTGATGGCCCTTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SYVLLSSSSRSS*SMVRELMALLG Trigger: CCCCAGAAGGGCCATCAGCTCCCTGACCATTGACAAGCTGCTTCTGGAGGAAGAGGAAAGCAACACGTACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CAA 90 bp | TGGTTGAGCTCGTACGTGTTGCTTTCCTCTTCCTCCAGAAGCAGCTaGTCAATGGTCAGGGAGCTGATGGCCCTTCTGGGGTCATCCATG | + |
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Preference number: 6 (lower is better) Translates to: WLSSYVLLSSSSRSS*SMVRELMALLGSSM Trigger: CATGGATGACCCCAGAAGGGCCATCAGCTCCCTGACCATTGACAAGCTGCTTCTGGAGGAAGAGGAAAGCAACACGTACGAGCTCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CAA 90 bp | ATCATGTTAGCGGGCGTGTTGCTTTCCTCTTCCTCCAGAAGCAGCTaGTCAATGGTCAGGGAGCTGATGGCCCTTCTGGGGTCATCCATG | + |
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Preference number: 6 (lower is better) Translates to: IMLAGVLLSSSSRSS*SMVRELMALLGSSM Trigger: CATGGATGACCCCAGAAGGGCCATCAGCTCCCTGACCATTGACAAGCTGCTTCTGGAGGAAGAGGAAAGCAACACGCCCGCTAACATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214322.2 |
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| CDS CCA 72 bp | GCCAGCCAGCACATAATGTTCCCTCCTCTGTCACTGTaGAAGCAGAAACCTCCATGTCAAGGCAGGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: ASQHIMFPPLSL*KQKPPCQGRKD Trigger: GTCCTTCCTGCCTTGACATGGAGGTTTCTGCTTCCACAGTGACAGAGGAGGGAACATTATGTGCTGGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034554.9 |
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| CDS CCA 72 bp | AGCAGTGCTTCTTGGCGTGACATTAGTGATGAGTGGTaGAGAAGCATAGGTCAACACCGAGGAGGGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSASWRDISDEW*RSIGQHRGGSH Trigger: GTGGGACCCTCCTCGGTGTTGACCTATGCTTCTCCACCACTCATCACTAATGTCACGCCAAGAAGCACTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS CCA 72 bp | TGTAGCAGTGCTTCTTGGCGTGACATTAGTGATGAGTaGTGGAGAAGCATAGGTCAACACCGAGGAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CSSASWRDISDE*WRSIGQHRGGS Trigger: GGACCCTCCTCGGTGTTGACCTATGCTTCTCCACCACTCATCACTAATGTCACGCCAAGAAGCACTGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034554.9 ENSMUST00000214322.2 |
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| CDS CAA 90 bp | GCTGACAGAAGTATTTTAAGTGCTGGCATCATGTTAGCGGGCGTGTaGCTTTCCTCTTCCTCCAGAAGCAGCTTGTCAATGGTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ADRSILSAGIMLAGV*LSSSSRSSLSMVRE Trigger: CTCCCTGACCATTGACAAGCTGCTTCTGGAGGAAGAGGAAAGCAACACGCCCGCTAACATGATGCCAGCACTTAAAATACTTCTGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214322.2 |
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